Commit Graph

22334 Commits

Author SHA1 Message Date
Ben Woodcroft 18dea67dc3
gnu: blast+: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
2017-07-04 19:58:42 +10:00
Mark H Weaver c24ea83cd7
gnu: linux-libre: Update to 4.12.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.11-i686.conf,
gnu/packages/aux-files/linux-libre/4.11-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.12-i686.conf,
gnu/packages/aux-files/linux-libre/4.12-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Update accordingly.
2017-07-04 04:24:58 -04:00
Efraim Flashner fdaf6cd345
gnu: qt: Update to 5.9.1.
* gnu/packages/qt.scm (qtbase, qtsvg, qtimageformats, qtx11extras)
(qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors)
(qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel)
(qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2)
(qtgraphicaleffects, qtgamepad, qtscxml, qtpurchasing, qtcanvas3d)
(qtcharts, qtdatavis3d, qtwebkit): Update to 5.9.1.
(qtwebkit)[source]: Change to official qt location.
2017-07-04 08:55:00 +03:00
Marius Bakke a8a964db83
gnu: python-pylint: Update to 1.7.2.
* gnu/packages/python.scm (python-pylint): Update to 1.7.2.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-PYTEST-RUNNER.
2017-07-04 02:52:26 +02:00
Marius Bakke de2f56cf96
gnu: python-astroid: Update to 1.5.3.
* gnu/packages/python.scm (python-astroid): Update to 1.5.3.
[properties]: Declare python2 variant.
(python2-astroid)[propagated-inputs]: Add PYTHON2-BACKPORTS-FUNCTOOLS-LRU-CACHE,
PYTHON2-ENUM34 and PYTHON2-SINGLEDISPATCH.
2017-07-04 02:52:26 +02:00
Marius Bakke 96bbc41f8b
gnu: python-pyopenssl: Update to 17.1.0.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.1.0.
[source]: Remove patch.
[native-inputs]: Add PYTHON-PRETEND.
[arguments]<#:phases>: Disable the network test here instead of via a patch.
Also disable one new test.
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-04 02:52:26 +02:00
Marius Bakke 89fc5b82d4
gnu: python-cryptography: Update to 1.9.
* gnu/packages/python.scm (python-cryptography-vectors): Update to 1.9.
(python-cryptography): Update to 1.9.
[propagated-inputs]: Remove PYTHON-PACKAGING.
2017-07-04 02:52:25 +02:00
Marius Bakke 029933cf79
gnu: python-cffi: Update to 1.10.0.
* gnu/packages/python.scm (python-cffi): Update to 1.10.0.
[arguments]<#:phases>: Patch distutils.ccompiler call to use "gcc". Patch
another hard-coded cc invocation. Adjust `py.test` invocation per README.
2017-07-04 02:52:25 +02:00
Marius Bakke 295f32f34b
gnu: python-cffi: Really enable tests.
* gnu/packages/python.scm (python-cffi, python2-cffi)[arguments]: Replace
'check' phase with custom expression. Change to 'modify-phases' syntax.
2017-07-04 02:52:25 +02:00
Marius Bakke 92d7e87c59
gnu: re2: Update to 2017-07-01.
* gnu/packages/regex.scm (re2): Update to 2017-07-01.
2017-07-04 02:52:25 +02:00
Marius Bakke 6db571cbf0
install: Drop redundant package after c0f5eee4b2.
* gnu/system/install.scm (installation-os): Remove SHADOW.
2017-07-04 02:52:25 +02:00
Tobias Geerinckx-Rice f88eaccf19
gnu: ibus: Update to 1.5.16.
* gnu/packages/ibus.scm (ibus): Update to 1.5.16.
2017-07-04 00:51:52 +02:00
Tobias Geerinckx-Rice e97b75d997
gnu: cdogs-sdl: Update to 0.6.5.
* gnu/packages/games.scm (cdogs-sdl): Update to 0.6.5.
[inputs]: Add mesa.
[home-page]: Use HTTPS.
2017-07-04 00:51:52 +02:00
Tobias Geerinckx-Rice e9e3a69d36
gnu: nnn: Update to 1.2.
* gnu/packages/admin.scm (nnn): Update to 1.2.
2017-07-04 00:51:52 +02:00
Kei Kebreau 910f1709a8
gnu: gcr: Correct patch.
* gnu/packages/patches/gcr-disable-failing-tests.patch: Correct
erroneously committed file.

This is a follow-up to commit 85c774808f.
2017-07-03 18:42:50 -04:00
Ludovic Courtès 960c6ce96d
discovery: Recurse into directories pointed to by a symlink.
Reported by Christopher Baines <mail@cbaines.net>
and Alex Kost <alezost@gmail.com>
at <https://lists.gnu.org/archive/html/guix-devel/2017-06/msg00290.html>.

* guix/discovery.scm (scheme-files): When ENTRY is a symlink that
doesn't end in '.scm', call 'stat' and recurse if it points to a
directory.
* tests/discovery.scm ("scheme-modules recurses in symlinks to
directories"): New test.
2017-07-03 23:51:23 +02:00
Ludovic Courtès cc1dfc202f
copy: Default to port 22.
Failing to do that, "%p" would be "0" when using "ProxyCommand"
in ~/.ssh/config.

* guix/scripts/copy.scm (send-to-remote-host): Default to port 22.
(retrieve-from-remote-host): Likewise.
2017-07-03 23:51:23 +02:00
Ludovic Courtès d5ec5ed719
packages: Mark 'replacement' as an "innate" field.
Suggested by Mark H Weaver
at <https://lists.gnu.org/archive/html/guix-devel/2017-06/msg00355.html>.

* guix/packages.scm (<package>)[replacement]: Mark as "innate".
* gnu/packages/base.scm (glibc-2.25-patched, glibc-2.24)
(glibc-2.23, glibc-2.22, glibc-2.21, glibc-locales): Remove
'replacement' field, which was set to #f.
* gnu/packages/commencement.scm (perl-boot0): Likewise.
* gnu/packages/fontutils.scm (graphite2/fixed): Likewise.
* gnu/packages/ghostscript.scm (ghostscript/fixed): Likewise.
* gnu/packages/gnupg.scm (libgcrypt-1.7.8): Likewise.
* gnu/packages/guile.scm (guile-2.0/fixed, guile-2.2): Likewise.
* gnu/packages/icu4c.scm (icu4c/fixed): Likewise.
* gnu/packages/image.scm (libpng-apng): Likewise.
* gnu/packages/make-bootstrap.scm (%guile-static): Likewise.
* gnu/packages/pcre.scm (pcre/fixed): Likewise.
* gnu/packages/perl.scm (perl/fixed): Likewise.
* gnu/packages/ruby.scm (ruby-2.3, ruby-2.2, ruby-2.1)
(ruby-1.8): Likewise.
* gnu/packages/tls.scm (gnutls-3.5.13, gnutls/guile-2.2): Likewise.
* gnu/packages/xml.scm (expat-2.2.1): Likewise.
2017-07-03 23:51:22 +02:00
Nicolas Goaziou f6444059dd
gnu: wine: Add stable release.
* gnu/packages/wine.scm (wine): Refer to stable release instead of development
  one.
(wine-next): New variable.
2017-07-03 18:10:11 +02:00
宋文武 85cfbd46ce
profiles: xdg-desktop-database: Run the hook when GLib is referenced.
This will pull the latest 'desktop-file-utils' package into the profile
closure, as the 'xdg-mime-database' hook already does.

* guix/profiles.scm (xdg-desktop-database): Run the hook when 'glib' is
referenced.
2017-07-03 23:27:04 +08:00
Danny Milosavljevic 3b6e7d8651
doc: Update formatting.
* doc/guix.texi (disk-image): Update formatting of "ext4".

Follow-up to 3f4d8a7f66.
2017-07-03 16:38:05 +02:00
Oleg Pykhalov aadd75acd6
gnu: Add emacs-emamux.
* gnu/packages/emacs.scm (emacs-emamux): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-07-03 22:34:40 +08:00
Danny Milosavljevic 08c1f2d21c
build: Add (gnu build file-systems) import.
* gnu/build/vm.scm: Add (gnu build file-systems) import.
2017-07-03 16:33:46 +02:00
Danny Milosavljevic 3f4d8a7f66
guix system: Add "--file-system-type" option.
* guix/scripts/system.scm (process-action): Pass file-system-type to ...
(perform-action): ... here.  Add new keyword argument.  Pass new value to ...
(system-derivation-for-action): ... here.  Add new keyword argument.
Pass new value to system-disk-image.
* doc/guix.texi (disk-image): Document new option.
2017-07-03 16:33:46 +02:00
Kei Kebreau 85c774808f
gnu: gcr: Enable working tests.
* gnu/packages/patches/gcr-disable-failing-tests.patch,
gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch:
New files.
* gnu/local.mk (dist_patch_DATA): Add patches.
* gnu/packages/gnome.scm (gcr)[source]: Use patches.
[arguments]: Enable tests.
2017-07-03 09:52:59 -04:00
Danny Milosavljevic 4f80be730e
build: Clarify error message when make-iso9660-image fails.
* gnu/build/vm.scm (make-iso9660-image): Clarify error message.
2017-07-03 15:13:09 +02:00
Danny Milosavljevic 1feb3076cb
build: Allow specifying volume-uuid with make-iso9660-image.
* gnu/build/file-systems.scm (iso9660-uuid->string): Export.
* gnu/build/vm.scm (make-iso9660-image): Add volume-uuid.
2017-07-03 15:07:25 +02:00
宋文武 1ec0c1f30e
gnu: xfce: Propagate search paths of 'xfce4-panel'.
* gnu/packages/xfce.scm (xfce)[native-search-paths]: New field.
2017-07-03 19:27:56 +08:00
Roel Janssen fd2d17cdae
gnu: Add emacs-sparql-mode.
* gnu/packages/emacs.scm (emacs-sparql-mode): New variable.
2017-07-03 13:02:07 +02:00
Danny Milosavljevic be1033a334
build: Add iso9660 system image generator.
* build-aux/hydra/gnu-system.scm (qemu-jobs): Add 'iso9660-image .
* gnu/build/vm.scm (make-iso9660-image): New variable.  Export it.
* gnu/system/vm.scm (iso9660-image): New variable.  Use make-iso9660-image.
(system-disk-image): Use iso9660-image.
2017-07-03 10:07:59 +02:00
Ludovic Courtès 1b0f266e40
gnu: Switch guile-cairo and dependents to Guile 2.2 again.
Fixes <https://bugs.gnu.org/27551>.
Reported by Leo Famulari <leo@famulari.name>.

This reinstates the following commits:

  e3ddb1e83 * gnu: guile-cairo: Switch to Guile 2.2.
  ae5c6ef39 * gnu: guile-gnome: Update to 2.16.5.
  0fd8013fc * gnu: guile-rsvg: Update to commit 05c6a2fd.
  66b9183c4 * gnu: guile-lib: Switch to Guile 2.2.

and adds the following changes:

* gnu/bootloader/grub.scm (svg->png): Add 'package->derivation' call for
GUILE-2.2.  Pass #:guile-for-build to 'gexp->derivation'.
* gnu/build/svg.scm (svg->png): Add 'em' and 'ex' to the 'let-values'
form to account for all the values returned by
'rsvg-handle-get-dimensions', which Guile 2.2 does not truncate.
2017-07-02 22:52:30 +02:00
Theodoros Foradis 61f81618a8
gnu: Add toxic.
* gnu/packages/messaging.scm (toxic): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-02 22:52:27 +02:00
Danny Milosavljevic ed3485fa9c
linux-initrd: Add isofs if necessary.
* gnu/system/linux-initrd.scm (base-initrd): Add isofs.
2017-07-02 20:27:26 +02:00
Alex Kost 3fb8e281b7
gnu: emacs-guix: Update to 0.3.2.
* gnu/packages/emacs.scm (emacs-guix): Update to 0.3.2.
[arguments]: Add '--with-guix-site-ccache-dir' configure flag, as Guix
installs its .go files separately nowadays.
2017-07-02 20:45:18 +03:00
Danny Milosavljevic 9c0a05b31e
file-systems: iso9660-uuid->string: Use "-" as separator in the result.
* gnu/build/file-systems.scm (iso9660-uuid->string): Use "-" as separator
in the result.
2017-07-02 19:27:25 +02:00
Leo Famulari f277dea2e2
gnu: beets: Update to 1.4.5.
* gnu/packages/music.scm (beets): Update to 1.4.5.
2017-07-02 11:35:04 -04:00
Ludovic Courtès 50cb948f1c
install: Re-add /bin/sh.
Reported by Divan Santana <divan@santanas.co.za>.
/bin/sh had disappeared in commit
387e175492.

* gnu/system/install.scm (%installation-services): Add
'special-files-service-type' instance.
2017-07-02 16:44:59 +02:00
Leo Famulari e00a59097e
gnu: python-vobject: Update to 0.9.5.
* gnu/packages/python.scm (python-vobject, python2-vobject): Update to 0.9.5.
2017-07-02 09:17:20 -04:00
Leo Famulari 477aa33400
gnu: vdirsyncer: Update to 0.16.0.
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.0.
[license]: Change to bsd-3.
2017-07-02 09:17:16 -04:00
Efraim Flashner bfba12695a
gnu: ovmf: Fix build on x86_64.
This is a follow-up to 2eb95ade8f.

* gnu/packages/firmware.scm (ovmf)[arguments]: Fix the syntax used when
following the x86_64 fork of the arguments.
2017-07-02 13:13:35 +03:00
宋文武 dbde386ee3
ui: package->recutlis: Remove duplicated package names in dependencies.
* guix/ui.scm (package->recutils): Add call to 'delete-duplicates' in
'dependencies->recutils'.
2017-07-02 13:14:16 +08:00
Ludovic Courtès b2fde4800d
store: 'references/substitutes' really caches its result.
Until now the cache was always empty because 'for-each' was passed ITEMS
as its second argument, and ITEMS was the empty list at that point.

* guix/store.scm (references/substitutes): Add 'requested' variable.
Use it as second argument of 'for-each' in base case.
2017-07-02 00:41:12 +02:00
Ludovic Courtès 2633bd324b
store: 'references/substitutes' save an RPC is the trivial case.
* guix/store.scm (references/substitutes): Save a
'substitutable-path-info' call when MISSING is empty.
2017-07-02 00:41:12 +02:00
Efraim Flashner dd78efe39a
gnu: font-google-noto: Update to 20170403.
* gnu/packages/fonts.scm (font-google-noto): Update to 20170403.
[source]: Update source uri.
2017-07-01 23:45:20 +03:00
Efraim Flashner fc19cee18c
gnu: font-gnu-unifont: Update to 10.0.03.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.03.
[properties]: Add 'upstream-name' to ease updates.
2017-07-01 23:45:19 +03:00
Leo Famulari 5ace0919c2
Revert "gnu: guile-lib: Switch to Guile 2.2."
This reverts commit 66b9183c4f.
2017-07-01 16:08:47 -04:00
Leo Famulari 6b820ef15d
Revert "gnu: guile-rsvg: Update to commit 05c6a2fd."
This reverts commit 0fd8013fca.
2017-07-01 16:08:47 -04:00
Leo Famulari 5e1f9b3042
Revert "gnu: guile-gnome: Update to 2.16.5."
This reverts commit ae5c6ef393.
2017-07-01 16:08:47 -04:00
Leo Famulari f3bb868a71
Revert "gnu: guile-cairo: Switch to Guile 2.2."
This commit caused the build of grub-image.png to fail, prevent the
build of grub.cfg and reconfiguring of GuixSD:

<https://bugs.gnu.org/27551>

This reverts commit e3ddb1e832.
2017-07-01 16:08:47 -04:00
Leo Famulari dc03f32dea
gnu: guile-git: Update source URL.
* gnu/packages/guile.scm (guile-git)[source]: Update URL.
2017-07-01 15:25:21 -04:00