a99b0ad785
tests: Adjust graph test.
...
This is a followup to 301a424906
2018-06-06 14:37:35 +02:00
e32db0fa0f
gnu: vigra: Disable broken test.
...
* gnu/packages/image.scm (vigra)[arguments]: Add phase "disable-broken-test";
enable parallel build.
2018-06-06 13:15:21 +02:00
73c0e477e5
gnu: esmtp: Replace 'bootstrap phase.
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* gnu/packages/mail.scm (esmtp)[arguments]: Use custom 'autoconf phase
to replace default 'bootstrap phase.
2018-06-06 13:11:50 +03:00
a34dfa249c
gnu: can-utils: Remove 'bootstrap phase.
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* gnu/packages/networking.scm (can-utils)[arguments]: Remove unnecessary
'bootstrap phase.
2018-06-06 13:11:47 +03:00
ca8de35e90
Merge branch 'master' into core-updates
2018-06-05 23:44:11 +02:00
42639cc980
gnu: qtractor: Update to 0.9.1.
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* gnu/packages/music.scm (qtractor): Update to 0.9.1.
[arguments]: Add phase "fix-build-with-qt-5.11".
2018-06-05 23:43:12 +02:00
db89d31876
gnu: linux-libre: Update to 4.17.
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* gnu/packages/linux.scm (%linux-libre-version): Update to 4.17.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.16-arm.conf,
gnu/packages/aux-files/linux-libre/4.16-arm64.conf,
gnu/packages/aux-files/linux-libre/4.16-i686.conf,
gnu/packages/aux-files/linux-libre/4.16-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.17-arm.conf,
gnu/packages/aux-files/linux-libre/4.17-arm64.conf,
gnu/packages/aux-files/linux-libre/4.17-i686.conf,
gnu/packages/aux-files/linux-libre/4.17-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2018-06-05 17:21:03 -04:00
704051b258
gnu: linux-libre@4.14: Update to 4.14.48.
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* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.48.
(%linux-libre-4.14-hash): Update hash.
2018-06-05 17:20:57 -04:00
4418c59005
gnu: linux-libre@4.9: Update to 4.9.106.
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* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.106.
2018-06-05 17:20:53 -04:00
b4a145fa71
gnu: yoshimi: Update to 1.5.8.
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* gnu/packages/music.scm (yoshimi): Update to 1.5.8.
2018-06-05 23:18:10 +02:00
396aab8e69
gnu: freedoom: Fix compilation.
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* gnu/packages/games.scm (freedoom)[arguments]: Remove 'bootstrap phase.
2018-06-05 22:53:48 +03:00
d88884fa3b
gnu: arc-theme: Replace bootstrap phase.
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* gnu/packages/gmome.scm (arc-theme)[arguments]: Replace 'boostrap phase
with a custom phase.
2018-06-05 22:53:45 +03:00
f1c6de3735
gnu: tilda: Replace bootstrap phase.
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* gnu/packages/terminals.scm (tilda)[arguments]: Remove custom
'bootstrap phase and use it to replace default bootstrap phase.
2018-06-05 22:10:49 +03:00
909301591d
gnu: Add sjcount.
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* gnu/packages/bioinformatics.scm (sjcount): New variable.
2018-06-05 15:42:44 +02:00
97f6e9133a
services: Add dnsmasq-service-type.
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* gnu/services/dns.scm (dnsmasq-service-type): New variable.
(<dnsmasq-configuration>): New record type.
(dnsmasq-shepherd-service): New procedure.
* doc/guix.texi (DNS Services): Document it.
2018-06-05 20:05:31 +08:00
a64e30ed9e
gnu: Remove duplicate definition of r-heatmaply.
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* gnu/packages/cran.scm (r-heatmaply): Remove duplicate.
2018-06-05 13:59:54 +02:00
d0f3427433
gnu: Remove duplicate definition of r-heatmaply.
...
* gnu/packages/cran.scm (r-heatmaply): Remove duplicate.
2018-06-05 13:59:15 +02:00
1ee581973a
gnu: r-heatmaply: Add r-knitr.
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* gnu/packages/cran.scm (r-heatmaply)[propagated-inputs]: Add r-knitr.
2018-06-05 13:51:27 +02:00
6da3aa3763
gnu: r-heatmaply: Add r-knitr.
...
* gnu/packages/cran.scm (r-heatmaply)[propagated-inputs]: Add r-knitr.
2018-06-05 13:50:29 +02:00
e53152c72d
gnu: dropseq-tools: Remove failing phase.
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* gnu/packages/bioinformatics.scm (dropseq-tools)[arguments]: Delete
"generate-jar-indices" phase.
2018-06-05 13:12:13 +02:00
0c68f7fd9b
gnu: java-bouncycastle: Disable tests.
...
* gnu/packages/java.scm (java-bouncycastle)[arguments]: Disable tests.
2018-06-05 12:49:41 +02:00
9cc66d75a2
gnu: pigx-scrnaseq: Use only one variant of Picard.
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* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace
"java-picard" with "java-picard-2.10.3".
2018-06-05 11:26:34 +02:00
1f94ba9408
gnu: java-picard: Delete failing build phase.
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* gnu/packages/bioinformatics.scm (java-picard)[arguments]: Delete
"generate-jar-indices" phase.
2018-06-05 11:26:08 +02:00
1ed386fc26
gnu: java-cisd-jhdf5: Delete failing build phase.
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* gnu/packages/java.scm (java-cisd-jhdf5)[arguments]: Delete build phase
"generate-jar-indices".
2018-06-05 11:17:03 +02:00
a993ad833e
gnu: java-picard-1.113: Delete failing build phase.
...
* gnu/packages/bioinformatics.scm (java-picard-1.113)[arguments]: Delete
"generate-jar-indices" build phase.
2018-06-05 11:15:21 +02:00
e847f402c1
gnu: java-picard-2.10.3: Delete failing build phase.
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* gnu/packages/bioinformatics.scm (java-picard-2.10.3)[arguments]: Delete
generate-jar-indices phase.
2018-06-05 11:14:38 +02:00
d7e6fb6d7e
Merge branch 'master' into core-updates
2018-06-05 11:09:39 +02:00
71c495c941
gnu: r-rtracklayer: Update to 1.40.3.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.40.3.
2018-06-05 10:40:42 +02:00
fb8c17baef
gnu: r-ranger: Update to 0.10.1.
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* gnu/packages/statistics.scm (r-ranger): Update to 0.10.1.
2018-06-05 10:40:42 +02:00
c9a879ed54
gnu: r-np: Update to 0.60-8.
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* gnu/packages/cran.scm (r-np): Update to 0.60-8.
2018-06-05 10:40:42 +02:00
83d5c2e106
gnu: t-series: Update to 0.10-45.
...
* gnu/packages/cran.scm (t-series): Update to 0.10-45.
2018-06-05 10:40:42 +02:00
c152c6b361
gnu: r-ksamples: Update to 1.2-8.
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* gnu/packages/cran.scm (r-ksamples): Update to 1.2-8.
2018-06-05 10:40:42 +02:00
d19e0690b9
gnu: r-methylkit: Update to 1.6.1.
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* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.6.1.
2018-06-05 10:40:42 +02:00
0da6afa286
gnu: r-bamsignals: Update to 1.12.1.
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* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.12.1.
2018-06-05 10:40:42 +02:00
66ece08d05
Merge branch 'master' into core-updates
2018-06-05 09:59:27 +02:00
0ebef06dbe
build-system/r: Update to Bioconductor 3.7.
...
This is a follow-up to 41f17554d8
2018-06-05 09:58:52 +02:00
4bf0a1f8d1
gnu: p11-kit: Update to 0.23.12.
...
* gnu/packages/tls.scm (p11-kit): Update to 0.23.12.
2018-06-05 03:19:48 +02:00
8b71684a20
gnu: elfutils: Disable test suite on MIPS.
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* gnu/packages/elf.scm (elfutils)[arguments]: Add (#:tests? #f) on MIPS.
2018-06-04 21:19:35 -04:00
46fce96881
gnu: beets: Return #t from phases.
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* gnu/packages/music.scm (beets)[arguments]: Substitute INVOKE for
SYSTEM* and return #t from all phases.
2018-06-05 03:19:26 +02:00
123f86d898
gnu: nano: Update to 2.9.8.
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* gnu/packages/nano.scm (nano): Update to 2.9.8.
2018-06-05 03:18:46 +02:00
0d35a95417
gnu: python-pycurl: Update to 7.43.0.2.
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* gnu/packages/python-web.scm (python-pycurl): Update to 7.43.0.2.
2018-06-05 03:18:46 +02:00
4682d48363
gnu: fvwm: Update to 2.6.8.
...
* gnu/packages/fvwm.scm (fvwm): Update to 2.6.8.
2018-06-05 03:01:17 +02:00
f7b53e6855
gnu: perl-parse-yapp: Update to 1.21.
...
* gnu/packages/perl.scm (perl-parse-yapp): Update to 1.21.
2018-06-05 03:01:17 +02:00
b5dfccd7b6
gnu: perl-text-balanced: Update to 2.03.
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* gnu/packages/perl.scm (perl-text-balanced): Update to 2.03.
[source]: Update URI.
2018-06-05 03:01:16 +02:00
971b8381ff
gnu: perl-posix-strftime-compiler: Update to 0.42.
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* gnu/packages/perl.scm (perl-posix-strftime-compiler): Update to
0.42.
2018-06-05 03:01:07 +02:00
27f89be5c9
gnu: perl-moosex-methodattributes: Update to 0.31.
...
* gnu/packages/perl.scm (perl-moosex-methodattributes): Update to
0.31.
2018-06-05 03:00:58 +02:00
91cb6eaf52
gnu: perl-module-install: Update to 1.19.
...
* gnu/packages/perl.scm (perl-module-install): Update to 1.19.
[source]: Update URI.
2018-06-05 01:31:32 +02:00
ed2e354b79
gnu: perl-memoize-expirelru: Update to 0.56.
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* gnu/packages/perl.scm (perl-memoize-expirelru): Update to 0.56.
[source]: Update URI.
2018-06-05 01:31:32 +02:00
01c6607af9
gnu: ccid, pcsc-lite: Move away from alioth.debian.org.
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* gnu/packages/security-token.scm (ccid, pcsc-lite)[source, home-page]:
Update upstream URI.
2018-06-04 18:27:59 +02:00
19b662ea7c
gnu: ranger: Enable image support.
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* gnu/packages/disk.scm (ranger)[inputs]: Add 'w3m'.
[arguments]: Add wrapper for W3MIMGDISPLAY_PATH environment variable.
2018-06-04 16:35:03 +02:00
Ludovic Courtès