Commit Graph

34443 Commits

Author SHA1 Message Date
Ricardo Wurmus 689aacc12f
gnu: Add gffread.
* gnu/packages/bioinformatics.scm (gffread): New variable.
2018-08-14 12:48:14 +02:00
Pierre Neidhardt a87ee0e41c
gnu: Add hcxdumptool.
* gnu/packages/networking.scm (hcxdumptool): New variable.
2018-08-14 12:00:18 +02:00
Pierre Neidhardt 5bd3134e04
gnu: Add hcxtools.
* gnu/packages/networking.scm (hcxtools): New variable.
2018-08-14 12:00:18 +02:00
Pierre Neidhardt eb4ffe9b87
gnu: Add hashcat-utils.
* gnu/packages/password-utils.scm (hashcat-utils): New variable.
2018-08-14 12:00:18 +02:00
Pierre Neidhardt c10aa27866
gnu: Add hashcat.
* gnu/packages/password-utils.scm (hashcat): New variable.
2018-08-14 12:00:18 +02:00
Ricardo Wurmus 242519ce70
gnu: Add r-circus.
* gnu/packages/bioinformatics.scm (r-circus): New variable.
2018-08-14 11:29:17 +02:00
Ricardo Wurmus 4646d18eb7
gnu: Add r-hash.
* gnu/packages/cran.scm (r-hash): New variable.
2018-08-14 11:28:52 +02:00
Pierre Neidhardt 3d4908a77b
gnu: texlive-latex-l3packages: Fix missing files.
* gnu/packages/tex.scm (texlive-latex-l3packages): Actually install the files.
2018-08-14 10:41:08 +02:00
Kei Kebreau 9285f8bbae
gnu: coda: Update to 2.19.
* gnu/packages/maths.scm (coda): Update to 2.19.
2018-08-13 22:18:09 -04:00
Clément Lassieur 4ae0607dd8
services: nginx: Use 'invoke' rather than 'system*'.
* gnu/services/web.scm (nginx-shepherd-service): Replace SYSTEM* with INVOKE.
2018-08-13 23:44:34 +02:00
Clément Lassieur ef2dda8edb
services: postgresql: Get the Shepherd to respawn PostgreSQL.
* gnu/services/databases.scm (postgresql-shepherd-service): Change 'start' to
return the PID.
2018-08-13 23:44:26 +02:00
Leo Famulari ff6436307e
gnu: BIND: Use HTTPS source URL.
* gnu/packages/dns.scm (isc-bind)[source]: Use HTTPS URL.
2018-08-13 12:54:34 -04:00
Leo Famulari 8198b3db0b
gnu: isc-dhcp: Update bundled BIND to 9.11.4-P1.
* gnu/packages/admin.scm (isc-dhcp): Update bundled BIND to 9.11.4-P1.
[home-page, inputs, source]: Use HTTPS URLs.
2018-08-13 12:54:33 -04:00
Clément Lassieur fdbca05d78
services: prosody: Get the Shepherd to respawn Prosody.
* gnu/services/messaging.scm (prosody-shepherd-service): Return the PID when
the action is "start".
2018-08-13 18:11:02 +02:00
Clément Lassieur 2ded865665
services: prosody: Use 'invoke' rather than 'system*'.
* gnu/services/messaging.scm (prosody-shepherd-service): Replace SYSTEM* with
INVOKE.
2018-08-13 18:10:58 +02:00
Björn Höfling 18e56ad7eb
gnu: aegisub: Fix build.
* gnu/packages/patches/aegisub-icu59-include-unistr.patch: New file.
* gnu/lokal.mk (dist_patch_DATA): Register it.
* gnu/packages/video.scm (aegisub)[source]: Use patch.
[arguments]: Add CXXFLAGS, Return #t from fix-ldflags phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-13 11:43:04 -04:00
Kenny Ballou 504e26ed32
gnu: ansible: update to 2.5.7
* gnu/packages/admin.scm (ansible): Update to 2.5.7.
[arguments, native-inputs, inputs]: Use Python 3.
[native-inputs, inputs]: Replace python-pycrypto with python-cryptography.

Co-authored-by: Leo Famulari <leo@famulari.name>
2018-08-13 11:25:20 -04:00
Konrad Hinsen 19006c9231
gnu: emacs-racket-mode: Update to 0.0.2-2.1b78827.
* gnu/packages/emacs.scm (emacs-racket-mode): Update to 0.0.2-2.1b78827.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-13 11:16:20 -04:00
Alex Branham f236d99804
gnu: r-ggplot2: Update to 3.0.0
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.0.0
[propagated-inputs]: Add r-mgcv, r-rlang, r-viridislite, and r-withr.
[home-page]: Update URL.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-13 10:55:18 -04:00
Pierre Neidhardt b7d4247d85
gnu: emacs-helm-eww: Update to 20180725.
* gnu/packages/emacs.scm (emacs-helm-eww): Update to 20180725.
2018-08-13 16:37:30 +02:00
Timothy Sample e3fc9bcce2
gnu: racket: Ignore bytecode checksums in the store.
Fixes <https://debbugs.gnu.org/30680>.

* gnu/packages/patches/racket-store-checksum-override.patch: New file.
* gnu/packages/scheme.scm (racket)[sources]: Add it.
2018-08-12 20:20:36 -04:00
Leo Famulari 5a0696b2e3
gnu: borg: Update to 1.1.7.
* gnu/packages/backup.scm (borg): Update to 1.1.7.
2018-08-12 19:57:22 -04:00
Tobias Geerinckx-Rice e08474d650
gnu: fortune-mod: Clean up empty directory.
* gnu/packages/games.scm (fortune-mod)[arguments]: RMDIR ‘games/’ after
emptying it.
2018-08-13 01:51:48 +02:00
Tobias Geerinckx-Rice b3ce80d20f
gnu: libwacom: Update to 0.31.
* gnu/packages/xdisorg.scm (libwacom): Update to 0.31.
2018-08-13 01:51:48 +02:00
Tobias Geerinckx-Rice e38a80120e
gnu: python-wsgiproxy2: Update to 0.4.4.
* gnu/packages/python-web.scm (python-wsgiproxy2): Update to 0.4.4.
[arguments]: Remove. Restkit is not longer supported.
[native-inputs]: Remove unzip, python-nose, and python-coverage.
Add python-webtest.
[propagated-inputs]: Add python-requests and python-urllib3.
2018-08-13 01:51:48 +02:00
Tobias Geerinckx-Rice 57d5d3dade
gnu: python-ndg-httpsclient: Update to 0.5.1.
* gnu/packages/python-web.scm (python-ndg-httpsclient): Update to 0.5.1.
2018-08-13 01:51:47 +02:00
Tobias Geerinckx-Rice 247d4e7271
gnu: python-pep8: Use HTTPS home page.
Also add a comment about 1.7.1. This doesn't warrant a changelog entry,
so you never read this.

* gnu/packages/python.scm (python-pep8)[home-page]: Use HTTPS.
2018-08-13 01:51:47 +02:00
Tobias Geerinckx-Rice 52135e598c
gnu: strongswan: Update to 5.6.3 [fixes CVE-2018-{10811,5388}].
* gnu/packages/networking.scm (strongswan): Update to 5.6.3.
2018-08-13 01:51:47 +02:00
Tobias Geerinckx-Rice 07f450b2b0
gnu: ethtool: Update to 4.17.
* gnu/packages/networking.scm (ethtool): Update to 4.17.
2018-08-13 01:51:47 +02:00
Tobias Geerinckx-Rice 95bf07804a
gnu: ghc-parsec-numbers: Use HTTPS home page.
* gnu/packages/haskell.scm (ghc-parsec-numbers)[home-page]: Use HTTPS.
2018-08-13 01:51:46 +02:00
Clément Lassieur efb22b47db
services: cgit: Disable repo booleans having a global counterpart.
Otherwise the global counterpart is never taken into account.

* doc/guix.texi (Version Control Services): Update accordingly.
* gnu/services/cgit.scm (repo-boolean?, serialize-repo-boolean): Use the
DEFINE-MAYBE macro to allow for the 'disabled value.
(repository-cgit-configuration)[enable-commit-graph?, enable-log-filecount?,
enable-log-linecount?, enable-remote-branches?, enable-subject-links?,
enable-html-serving?]: Change default value to 'disabled.
2018-08-13 00:29:47 +02:00
Leo Famulari 162c8ab82e
nls: Update 'da' translation. 2018-08-12 16:46:13 -04:00
Tobias Geerinckx-Rice c8e15c9fb9
gnu: git-annex: Update to 6.20180807.
* gnu/packages/version-control.scm (git-annex): Update to 6.20180807.
2018-08-12 20:15:35 +02:00
Tobias Geerinckx-Rice d877e0d84c
gnu: xmobar: Update to 0.27.
* gnu/packages/wm.scm (xmobar): Update to 0.27.
[inputs]: Add ghc-parsec-numbers.
2018-08-12 20:15:34 +02:00
Tobias Geerinckx-Rice fe0fb890ea
gnu: Add ghc-parsec-numbers.
* gnu/packages/haskell.scm (ghc-parsec-numbers): New public variable.
2018-08-12 20:15:34 +02:00
Arun Isaac fab8a9f9c3
gnu: ccid: Move pcsc-lite from inputs to native-inputs.
pcsc-lite only provides the headers to build ccid. So, it is sufficient that
it be a native-input.

* gnu/packages/security-token.scm (ccid)[inputs]: Move pcsc-lite to ...
[native-inputs]: ... here.
2018-08-12 02:50:21 +05:30
Tobias Geerinckx-Rice 7e72f5471b
gnu: discount: Update to 2.2.4.
* gnu/packages/markup.scm (discount): Update to 2.2.4.
2018-08-11 18:55:46 +02:00
Tobias Geerinckx-Rice 743c5be2d6
gnu: discount: Remove bogus FILE-NAME.
The upstream name is fine.

* gnu/packages/markup.scm (discount)[source]: Remove FILE-NAME.
2018-08-11 18:55:46 +02:00
Tobias Geerinckx-Rice b01a879007
gnu: jpegoptim: Update to 1.4.6.
* gnu/packages/image.scm (jpegoptim): Update to 1.4.6.
2018-08-11 18:55:46 +02:00
Tobias Geerinckx-Rice aeb6d9a617
gnu: angband: Update to 4.1.3.
* gnu/packages/games.scm (angband): Update to 4.1.3.
2018-08-11 18:55:46 +02:00
Tobias Geerinckx-Rice abf06df2d5
gnu: fortune-mod: Return #t from all phases.
* gnu/packages/games.scm (fortune-mod)[arguments]: Return #t rather than
undefined from phases.
2018-08-11 18:55:46 +02:00
Tobias Geerinckx-Rice 3a2f1d93df
gnu: perl-email-simple: Update to 2.216.
* gnu/packages/mail.scm (perl-email-simple): Update to 2.216.
2018-08-11 18:55:45 +02:00
Tobias Geerinckx-Rice d2b8900f58
gnu: perl-lingua-en-tagger: Update to 0.29.
* gnu/packages/language.scm (perl-lingua-en-tagger): Update to 0.29.
2018-08-11 18:55:45 +02:00
Tobias Geerinckx-Rice 5635b4d67d
gnu: perl-glib: Update to 1.327.
* gnu/packages/glib.scm (perl-glib): Update to 1.327.
2018-08-11 18:55:45 +02:00
Ricardo Wurmus a928596162
import: hackage: Support recursive importing.
* guix/import/hackage.scm (hackage-recursive-import): New procedure.
(hackage-module->sexp): Return dependencies alongside dependencies.
(hackage->guix-package): Memoize results.
* guix/scripts/import/hackage.scm (show-help, %options, guix-import-hackage):
Support recursive importing.
* doc/guix.texi (Invoking guix import): Document option.
2018-08-11 18:53:46 +02:00
Tobias Geerinckx-Rice 424fd76828
gnu: fortune-mod: Update to 2.6.1.
* gnu/packages/games.scm (fortune-mod): Update to 2.6.1.
2018-08-11 18:01:18 +02:00
Tobias Geerinckx-Rice 7e1d376d30
gnu: fortune-mod: Don't use unstable tarball.
* gnu/packages/games.scm (fortune-mod)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2018-08-11 18:01:18 +02:00
Tobias Geerinckx-Rice 2f9891725d
gnu: perl-file-mimeinfo: Update to 0.29.
* gnu/packages/freedesktop.scm (perl-file-mimeinfo): Update to 0.29.
2018-08-11 18:01:18 +02:00
Tobias Geerinckx-Rice 9aba9b1278
Migrate search.cpan.org home pages to metacpan.org.
The venerable search.cpan.org has retired[0].

[0]: https://log.perl.org/2018/05/goodbye-search-dot-cpan-dot-org.html

* guix/import/cpan.scm (cpan-home): Generate metacpan.org home page URIs.
Update all previously generated ones in (gnu packages) to their
canonical new homes.
2018-08-11 17:22:31 +02:00
Tobias Geerinckx-Rice ab45b38fea
gnu: Use static & unversioned CPAN home pages.
Constructing home pages to be version-specific is not something we
really want or do elsewhere, and interferers with mass updates like the
one I'm about to make.

* gnu/packages/glib.scm (perl-net-dbus-glib)[home-page]: Use canonical
home page.
* gnu/packages/perl-check.scm (perl-test-nowarnings, perl-test-output)
(perl-test-simple, perl-test-tester)[home-page]: Likewise.
* gnu/packages/perl.scm (perl-benchmark-timer, perl-clone)
(perl-digest-sha1, perl-file-which, perl-getopt-tabular, perl-io-string)
(perl-ipc-run3, perl-probe-perl, perl-regexp-common, perl-sys-cpu)
[home-page]: Likewise.
* gnu/packages/tcl.scm (perl-tk)[home-page]: Likewise.
* gnu/packages/tls.scm (perl-net-ssleay)[home-page]: Likewise.
* gnu/packages/web.scm (perl-www-curl)[home-page]: Likewise.
* gnu/packages/xml.scm (perl-xml-dom)[home-page]: Likewise.
* gnu/packages/xorg.scm (perl-x11-protocol-other)[home-page]: Likewise.
2018-08-11 17:22:31 +02:00