90c48ddd76
gnu: Add rust-adler32.
...
* gnu/packages/crates-io.scm (rust-adler32): New variable.
2019-09-06 15:45:57 +03:00
f81d58b8b3
gnu: Add rust-tempdir.
...
* gnu/packages/crates-io.scm (rust-tempdir): New variable.
2019-09-06 15:45:57 +03:00
2f8e436a29
gnu: Add rust-rand-0.3.
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* gnu/packages/crates-io.scm (rust-rand-0.3): New variable.
2019-09-06 15:45:57 +03:00
5ef82ec8ba
gnu: Add rust-rand.
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* gnu/packages/crates-io.scm (rust-rand): New variable.
2019-09-06 15:45:56 +03:00
e15f55208f
services: Fix typo.
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This is a follow-up to 3b38bf141a
2019-09-06 13:52:33 +03:00
3b38bf141a
services: Add ‘/usr/bin/env’ special file.
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* gnu/services/base.scm (%base-services): Add ‘/usr/bin/env‘ to
special-files-service-type.
2019-09-06 12:24:32 +02:00
43931643a6
gnu: Add emacs-leetcode.
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* gnu/packages/emacs-xyz.scm (emacs-leetcode): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:37:41 +03:00
14c9c456c7
gnu: emacs-robe: Update to 0.8.2.
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* gnu/packages/emacs-xyz.scm (emacs-robe): Update to 0.8.2.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:36:35 +03:00
141d8a896f
gnu: emacs-flycheck-haskell: Include .hs file.
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* gnu/packages/emacs-xyz.scm (emacs-flycheck-haskell): Include package file.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:32:56 +03:00
a9ca0325b5
gnu: emacs-evil-traces: Enable tests.
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* gnu/packages/emacs-xyz.scm (emacs-evil-traces): Enable tests.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:29 +03:00
4278537e85
gnu: emacs-org-ql: Enable tests.
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* gnu/packages/emacs-xyz.scm (emacs-org-ql): Enable tests.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:19 +03:00
d6ac801591
gnu: emacs-sudo-edit: Enable tests.
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* gnu/packages/emacs-xyz.scm (emacs-sudo-edit): Enable tests.
[native-inputs]: Add emacs-undercover.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:11 +03:00
1acf8e7ea8
gnu: emacs-evil-exchange: Enable tests.
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* gnu/packages/emacs-xyz.scm (emacs-evil-exchange): Enable tests.
[native-inputs]: Add emacs-ert-runner.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:02 +03:00
a8afeb058e
gnu: emacs-evil-expat: Enable tests.
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* gnu/packages/emacs-xyz.scm (emacs-evil-expat): Enable tests.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:25:47 +03:00
8deabdba58
gnu: emacs-elisp-demos: Enable tests.
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* gnu/packages/emacs-xyz.scm (emacs-elisp-demos): Enable tests.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:25:27 +03:00
9b4ea95bbe
gnu: emacs-evil-owl: Update to 0.0.1-3.24e5f43.
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* gnu/packages/emacs-xyz.scm (emacs-evil-owl): Update to 0.0.1-3.24e5f43.
[source]: Enable tests.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:25:19 +03:00
473d636072
gnu: emacs-evil-multiedit: Enable tests.
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* gnu/packages/emacs-xyz.scm (emacs-evil-multiedit): Enable tests.
[inputs]: Add emacs-ert-runner.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:24:59 +03:00
66d2133500
gnu: Add texlive-booktabs.
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* gnu/packages/tex.scm (texlive-booktabs): New variable.
2019-09-05 22:45:42 +02:00
69f0c8cf55
gnu: Add texlive-siunitx.
...
* gnu/packages/tex.scm (texlive-siunitx): New variable.
2019-09-05 22:45:42 +02:00
11ecf9f48f
gnu: Add texlive-standalone.
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* gnu/packages/tex.scm (texlive-standalone): New variable.
2019-09-05 22:45:42 +02:00
f16e09487b
gnu: texlive-latex-xkeyval: Fix build.
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* gnu/packages/tex.scm (texlive-latex-xkeyval)[arguments]: Add various custom
build phases to fix the build.
[native-inputs]: Add texlive-latex-base, texlive-cm, texlive-lm, texlive-url,
texlive-graphics-def, texlive-xcolor, texlive-latex-footmisc,
texlive-latex-listings, texlive-iftex, texlive-pstricks, texlive-pst-text,
texlive-tools, and texlive-latex-pgf.
2019-09-05 22:45:41 +02:00
99b143655b
gnu: Add texlive-tools.
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* gnu/packages/tex.scm (texlive-tools): New variable.
2019-09-05 22:45:41 +02:00
51bf1c5188
gnu: Add texlive-iftex.
...
* gnu/packages/tex.scm (texlive-iftex): New variable.
2019-09-05 22:45:41 +02:00
a72d343aea
gnu: Add texlive-pst-text.
...
* gnu/packages/tex.scm (texlive-pst-text): New variable.
2019-09-05 22:45:41 +02:00
e5c081291e
gnu: Add texlive-pstricks.
...
* gnu/packages/tex.scm (texlive-pstricks): New variable.
2019-09-05 22:45:41 +02:00
73ce44218b
gnu: Add texlive-ydoc.
...
* gnu/packages/tex.scm (texlive-ydoc): New variable.
2019-09-05 22:45:41 +02:00
266e07421e
gnu: Add texlive-xcolor.
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* gnu/packages/tex.scm (texlive-latex-xcolor): Bind to deprecated package
pointing...
(texlive-color): ...to this variable; implement in terms of
simple-texlive-package.
[arguments]: Add phase "move-files" to install xcolor.pro to the expected
location.
2019-09-05 22:45:41 +02:00
f1a46c9025
gnu: texlive-fonts-iwona: Use double spacing in description.
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* gnu/packages/tex.scm (texlive-fonts-iwona)[description]: Use double spacing.
2019-09-05 22:45:41 +02:00
4526bd07f7
gnu: vigra-c: Update to 0.0.0-1.66ff4fa.
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* gnu/packages/image.scm (vigra-c): Update to 0.0.0-1.66ff4fa.
[inputs]: Add hdf5.
2019-09-05 22:45:41 +02:00
f480133c4e
gnu: libbigwig: Update to 0.4.4.
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* gnu/packages/bioinformatics.scm (libbigwig): Update to 0.4.4.
2019-09-05 22:45:41 +02:00
067ea2989f
gnu: python-pyfaidx: Remove python-setuptools as an input.
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As this is provided by the build system, and I'm assuming that it's not
necessary to have it as a propagated input.
* gnu/packages/bioinformatics.scm (python-pyfaidx)[propagated-inputs]: Remove
python-setuptools.
2019-09-05 18:35:47 +02:00
5f9fe21d49
gnu: umi-tools: Remove python-setuptools as an input.
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As this is provided by the build system.
* gnu/packages/bioinformatics.scm (umi-tools)[inputs,native-inputs]: Remove
python-setuptools.
2019-09-05 18:35:42 +02:00
e1e3fe0848
guix-install.sh: Work around locale issues in 'guix-daemon.service'.
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* etc/guix-install.sh (sys_enable_guix_daemon): Modify
'guix-daemon.service' to work around locale issues not fixed in 1.0.1.
2019-09-05 18:33:30 +02:00
67c2db17bc
download: Pass 'http_proxy' et al. to git, hg, etc.
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This allows 'git-fetch' etc. origins to honor the proxy and locale of
the daemon.
* guix/bzr-download.scm (bzr-fetch): Pass #:leaked-env-vars to
'gexp->derivation'.
* guix/cvs-download.scm (cvs-fetch): Likewise.
* guix/git-download.scm (git-fetch): Likewise.
* guix/hg-download.scm (hg-fetch): Likewise.
* guix/svn-download.scm (svn-multi-fetch): Likewise.
2019-09-05 18:33:30 +02:00
d550845840
gnu: Syncthing: Update to 1.2.2.
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* gnu/packages/syncthing.scm (syncthing): Update to 1.2.2.
[inputs]: Remove go-github-com-calmh-du and add go-github-com-shirou-gopsutil.
2019-09-05 11:09:36 -04:00
9a2f23341d
gnu: Add go-github-com-shirou-gopsutil.
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* gnu/packages/syncthing.scm (go-github-com-shirou-gopsutil): New variable.
2019-09-05 11:09:36 -04:00
a8ad05d40c
gnu: go-github-com-urfave-cli: Update to 1.21.0.
...
* gnu/packages/golang.scm (go-github-com-urfave-cli): Update to 1.21.0.
2019-09-05 11:09:32 -04:00
31885f444f
gnu: emacs-org-contrib: Update to 20190904.
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* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20190904.
2019-09-05 16:02:27 +02:00
be285c3dc0
gnu: emacs-org: Update to 9.2.6.
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* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.2.6.
2019-09-05 15:57:02 +02:00
51072ed8ac
gnu: emacs-org-caldav: Update to 0.0.0-1.
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* gnu/packages/emacs-xyz.scm (emacs-org-caldav): Update to latest commit,
since there is no release yet.
[description]: Remove alpha status, no longer specified in README.
2019-09-05 15:55:50 +02:00
0575fe681c
Revert "gnu: next: Compress the executable."
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Some essential references (e.g. libfixposix) are lost in the process.
This reverts commit 0e8b91dbc4
2019-09-05 14:52:48 +02:00
6b4ed9ad97
gnu: gama: Update to 2.07.
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* gnu/packages/gps.scm (gama): Update to 2.07.
2019-09-05 14:46:42 +03:00
79c6d8781b
gnu: bwa-meth: Capture one more reference to "bwa".
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Reported by: Alexander.Blume <Alexander.Blume@mdc-berlin.de>
* gnu/packages/bioinformatics.scm (bwa-meth)[arguments]: Capture invocation of
"bwa index" to retain reference to "bwa" package.
2019-09-05 12:06:43 +02:00
0e8b91dbc4
gnu: next: Compress the executable.
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* gnu/packages/web-browsers.scm (next)[arguments]: Compressing the executable
brings it from about 95 MiB to 22 MiB.
2019-09-05 11:55:58 +02:00
33a42f67ce
gnu: emacs-evil-collection: Update to 0.0.2.
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* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 0.0.2.
2019-09-05 11:55:58 +02:00
6b5f59c7a6
gnu: Add r-bigmelon.
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* gnu/packages/bioconductor.scm (r-bigmelon): New variable.
2019-09-05 11:46:29 +02:00
7d2cb646f7
gnu: Add r-gdsfmt.
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* gnu/packages/bioconductor.scm (r-gdsfmt): New variable.
2019-09-05 11:46:29 +02:00
38babeaaa4
gnu: Add r-watermelon.
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* gnu/packages/bioconductor.scm (r-watermelon): New variable.
2019-09-05 11:46:29 +02:00
46721deaf8
gnu: Add r-illuminahumanmethylation450kanno-ilmn12-hg19.
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* gnu/packages/bioconductor.scm
(r-illuminahumanmethylation450kanno-ilmn12-hg19): New variable.
2019-09-05 11:46:29 +02:00
db316d7376
gnu: Add r-roc.
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* gnu/packages/bioconductor.scm (r-roc): New variable.
2019-09-05 11:46:29 +02:00
Efraim Flashner