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7896 Commits

Author SHA1 Message Date
Ben Woodcroft 8fd790eb87 gnu: Add metabat. 
* gnu/packages/bioinformatics.scm (metabat): New variable.
 2015-07-19 15:17:08 -04:00
Mathieu Lirzin 3ab98da1bd gnu: lxappearance: Add missing slash. 
* gnu/packages/lxde.scm (lxappearance)[source]: Add missing slash.
 2015-07-19 12:48:47 +02:00
Alex Kost 0c909c056e gnu: emacs-mmm-mode: Use gnu-build-system. 
* gnu/packages/emacs.scm (emacs-mmm-mode): Replace melpa-stable URL with
  the github URL and use 'gnu-build-system' instead of
  'emacs-build-system'.  Fix typo (add missing space before the
  description).
 2015-07-19 12:44:39 +03:00
Mark H Weaver 7286933d7e gnu: mariadb: Update to 10.0.20. 
* gnu/packages/databases.scm (mariadb): Update to 10.0.20.
 2015-07-19 05:08:29 -04:00
David Thompson 0e215f49fe gnu: guile-opengl: Install compiled modules in the correct place. 
* gnu/packages/gl.scm (guile-opengl): Install compiled modules in the same
  directory as the source modules.
 2015-07-18 22:59:46 -04:00
Ludovic Courtès aa27987f71 gnu: cross-base: Distinguish cross Linux headers from native headers. 
Commit c6d33a9 provided an incorrect fix, whereby the "linux-headers" key
would be used twice in %BUILD-INPUTS and the 'set-cross-path' phase would
refer to the first one of them, which happened to be the native headers, and
not the target headers.  This patch solves the problem by removing the
ambiguity.

* gnu/packages/cross-base.scm (cross-gcc-arguments)[set-cross-path]: Remove to
  "xlinux-headers" instead of "linux-headers".
  (cross-gcc): When LIBC is true, add explicit "xlinux-headers" input, taken
  from LIBC's propagated inputs.
 2015-07-19 00:15:44 +02:00
Ludovic Courtès 2e839545c7 gnu: ninja: Do not report files with mtime = 0 as missing. 
This is a followup to 47f315a.

* gnu/packages/patches/ninja-zero-mtime.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/ninja.scm (ninja)[source]: Reinstate 'patches' field and add
  this patch.
  [arguments]: Remove 'apply-ninja-tests.patch' phase.
 2015-07-18 23:27:18 +02:00
Ludovic Courtès c5c4c4b437 gnu: rapidjson: Build without -Werror. 
* gnu/packages/web.scm (rapidjson)[source]: Add 'snippet'.
 2015-07-18 22:53:50 +02:00
Ludovic Courtès 82700f0fb3 gnu: crda: Add forgotten patch. 
This file should have been added as part of commit cc205da.

* gnu/packages/patches/crda-optional-gcrypt.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-07-18 17:15:03 +02:00
pjotrp 6e9f2913ba build-system/ruby: Add #:gem-flags parameter. 
* guix/build-system/ruby.scm (build): add 'gem-flags' key
* guix/build/ruby-build-system.scm (build): use 'gem-flags' key
* doc/guix.texi (Build Systems): Mention #:gem-flags.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2015-07-18 17:15:03 +02:00
David Thompson 702675c515 gnu: dfu-programmer: Update to 0.7.2. 
* gnu/packages/flashing-tools.scm (dfu-programmer): Update to 0.7.2.  Add
  pkg-config input.
 2015-07-18 06:47:33 -04:00
Alex Kost 9cced52610 tests: Fix 'publish' test for nix-base32 format. 
This is a followup to commit 3b307162e8.

* tests/publish.scm ("/*.narinfo"): Use 'bytevector->nix-base32-string',
  not 'bytevector->base32-string'.
 2015-07-18 17:05:28 +03:00
Alex Kost e881752c39 gnu packages: Clean up synopses and descriptions. 
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
  gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/bittorrent.scm,
  gnu/packages/code.scm, gnu/packages/compression.scm,
  gnu/packages/databases.scm, gnu/packages/enchant.scm,
  gnu/packages/firmware.scm, gnu/packages/fonts.scm,
  gnu/packages/freedesktop.scm, gnu/packages/games.scm, gnu/packages/gd.scm,
  gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gsasl.scm,
  gnu/packages/gstreamer.scm, gnu/packages/gtk.scm, gnu/packages/guile.scm,
  gnu/packages/haskell.scm, gnu/packages/language.scm,
  gnu/packages/lesstif.scm, gnu/packages/libreoffice.scm,
  gnu/packages/linux.scm, gnu/packages/llvm.scm, gnu/packages/maths.scm,
  gnu/packages/mcrypt.scm, gnu/packages/mit-krb5.scm, gnu/packages/mp3.scm,
  gnu/packages/ncdu.scm, gnu/packages/networking.scm, gnu/packages/ntp.scm,
  gnu/packages/ocaml.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm,
  gnu/packages/perl.scm, gnu/packages/pretty-print.scm,
  gnu/packages/pulseaudio.scm, gnu/packages/python.scm,
  gnu/packages/rdesktop.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm,
  gnu/packages/slang.scm, gnu/packages/slim.scm, gnu/packages/telephony.scm,
  gnu/packages/tls.scm, gnu/packages/tmux.scm, gnu/packages/tre.scm,
  gnu/packages/unrtf.scm, gnu/packages/version-control.scm,
  gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wget.scm,
  gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xiph.scm:
  Fix typos.  Trim long lines.  Add missing periods in the end of sentences.
  Use double spaces between sentences.  Remove trailing whitespaces.
 2015-07-18 13:05:01 +03:00
Alex Kost 7c125ce023 gnu packages: Avoid description lines with leading "(". 
* gnu/packages/curl.scm (curl): Reformat description to avoid a line
  beginning with "(" because such lines break font-lock highlighting
  in Emacs.
* gnu/packages/flashing-tools.scm (dfu-programmer): Likewise.
* gnu/packages/games.scm (gnugo): Likewise.
* gnu/packages/gnome.scm (json-glib): Likewise.
* gnu/packages/image.scm (jbig2dec): Likewise.
* gnu/packages/maths.scm (units): Likewise.
* gnu/packages/pdf.scm (mupdf): Likewise.
* gnu/packages/web.scm (perl-encode-locale): Likewise.
* gnu/packages/wordnet.scm (wordnet): Likewise.
* gnu/packages/xml.scm (libxml2):Likewise.
 2015-07-18 13:05:01 +03:00
Alex Kost 01bec8a61d gnu: Document xorg packages. 
* gnu/packages/xorg.scm: Add/improve 'synopsis'/'description' fields of
  many packages.
 2015-07-18 12:54:39 +03:00
Andreas Enge 2c0441644a Revert "gnu: calibre: Update to 2.30.0." 
The new version requires the SSL package from Python >= 2.7.9.

This reverts commit d571101770.
 2015-07-18 10:21:15 +02:00
Mark H Weaver 47f315a73f gnu: ninja: Apply the patch in a phase to avoid 'patch-and-repack'. 
* gnu/packages/ninja.scm (ninja)[source]: Comment out 'patches' field.
  [native-inputs]: Add 'patch' and "ninja-tests.patch".  Move above
  'arguments' field.
  [arguments]: Add 'apply-ninja-tests.patch' phase.
 2015-07-17 21:46:14 -04:00
Mark H Weaver b40c3d09b5 gnu: ninja: Use modify-phases. 
* gnu/packages/ninja.scm (ninja)[arguments]: Use modify-phases.  Return a
  boolean result from all phase procedures.
 2015-07-17 21:25:58 -04:00
Mark H Weaver f90ef3c355 gnu: clisp: Do not pass --build=<triplet> to configure. 
* gnu/packages/lisp.scm (clisp)[arguments]: Add #:build #f.
 2015-07-17 18:34:05 -04:00
Ludovic Courtès 3b307162e8 publish: Write hashes in nix-base32 format. 
* guix/scripts/publish.scm (narinfo-string): Use
  'bytevector->nix-base32-string', not 'bytevector->base32-string'.
 2015-07-18 00:14:04 +02:00
Ludovic Courtès 13f0c6ed41 syscalls: Struct deserializer can now return arbitrary objects. 
* guix/build/syscalls.scm (read-types): Add RETURN and VALUES parameters.
  (define-c-struct): Add WRAP-FIELDS parameter and pass it to 'read-types'.
  (sockaddr-in, sockaddr-in6): Add first argument that uses
  'make-socket-address'.
  (read-socket-address): Remove 'match' on the result of 'read-sockaddr-in'
  and 'read-sockaddr-in6'.
 2015-07-17 23:31:29 +02:00
Ludovic Courtès 4f7b564adb download: Remove spurious warning about 'https_proxy'. 
* guix/build/download.scm (open-connection-for-uri)[with-https-proxy]: Warn
  about 'https_proxy' only when 'getenv' returns a non-empty string.
 2015-07-17 22:31:12 +02:00
Ludovic Courtès b7e147fffd gnu: libpsl: Fix source URL. 
* gnu/packages/web.scm (libpsl)[source]: Fix 'uri'.  Remove now
  unneeded 'file-name'.
 2015-07-17 22:10:24 +02:00
Ludovic Courtès b78cad85d3 file-systems: Subsystem cgroups now depend on /sys/fs/cgroup. 
* gnu/system/file-systems.scm (%control-groups): Define 'parent' variable.
  Initialize the 'dependencies' field for all the subsystems.
 2015-07-17 19:25:09 +02:00
Ludovic Courtès e51710d1ef file-systems: Add a 'dependencies' field to <file-system>. 
* gnu/system/file-systems.scm (<file-system>)[dependencies]: New field.
* gnu/system.scm (other-file-system-services)[requirements]: Honor
  'file-system-dependencies'.
* doc/guix.texi (File Systems): Document it.
 2015-07-17 19:24:15 +02:00
Ludovic Courtès 97121c2a21 gnu: Add Linux-Libre 4.0.8. 
* gnu/packages/linux.scm (linux-libre-4.0): New variable.
 2015-07-17 15:35:57 +02:00
Ludovic Courtès 68ac258b52 system: Use the CRDA udev rules. 
* gnu/services/base.scm (%base-services): Add CRDA to the #:rules of
  'udev-service'.
* gnu/system/install.scm (installation-services): Likewise.
 2015-07-17 15:35:57 +02:00
Ludovic Courtès cc205dac76 gnu: Add CRDA. 
* gnu/packages/linux.scm (crda): New variable.
 2015-07-17 15:35:57 +02:00
Ludovic Courtès c80b4a3e83 gnu: Add wireless-regdb. 
* gnu/packages/linux.scm (wireless-regdb): New variable.
 2015-07-17 15:35:57 +02:00
Ludovic Courtès 0eed5501b8 licenses: Add Fontana's copyleft-next. 
* guix/licenses.scm (copyleft-next): New variable.
 2015-07-17 15:35:57 +02:00
David Hashe f70d8383ee gnu: Add eog. 
* gnu/packages/gnome.scm (eog): New variable.
 2015-07-17 20:48:22 +08:00
David Hashe 177b42552f gnu: Add exempi. 
* gnu/packages/freedesktop.scm (exempi): New variable.
 2015-07-17 20:48:22 +08:00
Eric Bavier aa90f2cda7 gnu: duplicity: Update to 0.6.26. 
* gnu/packages/backup.scm (duplicity): Update to 0.6.26.
 2015-07-17 02:50:55 -05:00
Mark H Weaver e12027179f gnu: openssl: Work around GCC code generation bug on ARM with NEON. 
* gnu/packages/tls.scm (openssl)[arguments]: When compiling natively for
  armhf, pass -mfpu=vfpv3 to ./config.
 2015-07-17 03:31:28 -04:00
Ricardo Wurmus ec9825d666 gnu: Add emacs-pdf-tools. 
* gnu/packages/emacs.scm (emacs-pdf-tools): New variable.

Co-authored-by: Alex Kost <alezost@gmail.com>
 2015-07-17 09:12:09 +02:00
Mark H Weaver 2fdc682742 gnu: icecat: Add patch to adapt to freetype 2.6. 
* gnu/packages/patches/icecat-freetype-2.6.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
 2015-07-17 01:42:35 -04:00
Ludovic Courtès ee2a6304f3 system: Add 'kernel-arguments' field. 
* gnu/system.scm (<operating-system>)[kernel-arguments]: New field.
  (operating-system-grub.cfg): Honor it.
  (operating-system-parameters-file): Add 'kernel-arguments' to the parameters
  file.
* guix/scripts/system.scm (previous-grub-entries)[system->grub-entry]: Read
  the 'kernel-arguments' field of the parameters file, when available.
* gnu/system/vm.scm (system-qemu-image/shared-store-script):
  Use (operating-system-kernel-arguments os) in '-append'.
* doc/guix.texi (operating-system Reference): Document it.
 2015-07-17 01:11:06 +02:00
Ludovic Courtès 2378df558a system: Fix typo in 'PS1' in skeleton '.bashrc'. 
* gnu/system/shadow.scm (default-skeletons): Move misplaced backslash.
 2015-07-17 00:20:08 +02:00
Eric Bavier 355e53c4ca gnu: git: Adjust to new handling of propagated inputs. 
This is a followup to 161094c, which gets rid of the "a/b" notation for
propagated inputs.

* gnu/packages/version-control.scm (package-transitive-propagated-labels*):
  Do not prepend the package name to its input label.
  (package-propagated-input-refs): Delete duplicate labels.
  (git)[arguments]: Adjust wrapping of git-send-email accordingly.
 2015-07-16 16:47:05 -05:00
Ludovic Courtès e4d801623e gnu: libpsl: Update to 0.7.1. 
Removing the 'snippet' allows us to avoid 'patch-and-repack', which resets all
the mtimes, thereby breaking the expectation tested in
'test-is-public-builtin.c' that the mtime returned by 'psl_builtin_file_time'
is non-zero.

* gnu/packages/web.scm (libpsl): Update to 0.7.1.
  [source]: Remove 'modules' and 'snippet'.
  [native-inputs]: Add PKG-CONFIG.
 2015-07-17 00:01:38 +02:00
Ludovic Courtès 81e558fdb1 gnu: subversion: Skip the faulty test. 
The added patch from upstream didn't help, nor did downgrading to SQLite
3.8.9.  Thus, shamelessly skip the offending test.

* gnu/packages/patches/subversion-sqlite-3.8.9-fix.patch: Add one hunk to skip
  the faulty test, and another one from upstream.
 2015-07-16 23:33:15 +02:00
Ludovic Courtès a640d3d51b gnu: libgnome: Leave only one 'propagated-inputs' field. 
* gnu/packages/gnome.scm (libgnome): Merge the two 'propagated-inputs'
  fields (followup to 25338e9.)
 2015-07-16 17:17:12 +02:00
Mathieu Lirzin 7aab13f19d gnu: Add gnome-common. 
* gnu/packages/gnome.scm (gnome-common): New variable.
 2015-07-16 11:56:04 +02:00
Mathieu Lirzin 889e57f4d8 gnu: Add lxappearance. 
* gnu/packages/lxde.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2015-07-16 11:56:04 +02:00
Ludovic Courtès 6c92551af9 install: Reset the mtimes of all the files in the binary tarball. 
* gnu/system/install.scm (self-contained-tarball): Pass "--mtime=@0".  The
  only files whose mtime was not already were those in /var/guix and
  /gnu/store/.links.
 2015-07-16 09:58:19 +02:00
Ludovic Courtès 1cab9e810e file-systems: 'uuid' raises a syntax error for invalid UUIDs. 
* gnu/system/file-systems.scm (uuid): Call 'syntax-violation' when
  'string->uuid' returns #f.
* tests/file-systems.scm ("uuid, syntax error"): New test.
 2015-07-16 09:49:36 +02:00
Mark H Weaver 3bacb7a698 python-build-system: Add 'ensure-no-mtimes-pre-1980' phase. 
* guix/build/python-build-system.scm (ensure-no-mtimes-pre-1980):
  New phase.
  (%standard-phases): Add it after 'unpack'.
 2015-07-16 01:49:39 -04:00
Mark H Weaver 1084ec08c2 gnu: perl-net-ssleay: Avoid patching source in 'origin'. 
* gnu/packages/tls.scm (perl-net-ssleay)[source]: Move patch to ...
  [native-inputs]: ... here, and also add the 'patch' program.
  [arguments]: Use 'modify-phases'.  Add 'apply-patch' phase.  Return
  boolean result from 'set-ssl-prefix' phase.
 2015-07-15 23:43:33 -04:00
Mark H Weaver bbd1961545 gnu: ghc: Don't pass --build=<triplet> to configure. 
* gnu/packages/haskell.scm (ghc)[arguments]: Add #:build #f.
 2015-07-15 23:19:27 -04:00
Mark H Weaver 385ae063c9 gnu: unzip: Fix CVE-2014-9636 and some other bugs. 
* gnu/packages/patches/unzip-CVE-2014-9636.patch,
  gnu/packages/patches/unzip-allow-greater-hostver-values.patch,
  gnu/packages/patches/unzip-increase-size-of-cfactorstr.patch,
  gnu/packages/patches/unzip-initialize-symlink-flag.patch,
  gnu/packages/patches/unzip-remove-build-date.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/zip.scm (unzip)[source]: Add patches.
  [arguments]: Use 'modify-phases'.  Remove custom 'configure' phase; pass
  additional make-flags instead.  Add custom 'build' phase that builds
  "generic_gcc" target; remove "generic_gcc" from make-flags.
 2015-07-15 23:02:27 -04:00