ee0b4733e1
gnu: toybox: Don't install files to usr.
...
* gnu/packages/busybox.scm (toybox)[arguments]: Add custom phase to
remove any files installed in $PREFIX/usr.
2019-06-17 10:02:45 +03:00
c9f0331152
gnu: xpra: Update to 2.5.2.
...
* gnu/packages/xorg.scm (xpra): Update to 2.5.2.
2019-06-17 08:28:38 +02:00
0bc010dacd
gnu: Add emacs-extend-smime.
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* gnu/packages/emacs-xyz.scm (emacs-extend-smime): New variable.
2019-06-16 21:25:59 -07:00
3c33931c80
gnu: Upgrade emacs-default-encrypt to 4.4.
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* gnu/packages/emacs-xyz.scm (emacs-default-encrypt) <version>: Upgrade
to 4.4.
<sha256>: Update accordingly.
<uri, home-page>: Honor changes to upstream's website.
2019-06-16 21:25:59 -07:00
932a6c422a
gnu: r-rhisat2: Update to 1.0.3.
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* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.3.
2019-06-17 04:55:12 +02:00
42df44f645
gnu: r-seurat: Update to 3.0.2.
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* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.0.2.
2019-06-17 04:55:03 +02:00
6dc3c58728
gnu: r-tximport: Update to 1.12.1.
...
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.1.
2019-06-17 04:54:56 +02:00
7bbd06ed59
gnu: r-systempiper: Update to 1.18.1.
...
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.1.
2019-06-17 04:54:51 +02:00
fd61e9c5d6
gnu: r-r-utils: Update to 2.9.0.
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* gnu/packages/statistics.scm (r-r-utils): Update to 2.9.0.
2019-06-17 04:54:46 +02:00
0f4182a137
gnu: r-dt: Update to 0.7.
...
* gnu/packages/statistics.scm (r-dt): Update to 0.7.
2019-06-17 04:54:40 +02:00
074dd1806c
gnu: r-rcpparmadillo: Update to 0.9.500.2.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.500.2.0.
2019-06-17 04:54:36 +02:00
e89e4bb634
gnu: r-mime: Update to 0.7.
...
* gnu/packages/statistics.scm (r-mime): Update to 0.7.
2019-06-17 04:54:32 +02:00
24868ae72e
gnu: r-formatr: Update to 1.7.
...
* gnu/packages/statistics.scm (r-formatr): Update to 1.7.
2019-06-17 04:54:27 +02:00
4661effbd5
gnu: r-ggplot2: Update to 3.2.0.
...
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.2.0.
[propagated-inputs]: Remove r-plyr.
2019-06-17 04:54:11 +02:00
18242e4b52
gnu: r-servr: Update to 0.14.
...
* gnu/packages/cran.scm (r-servr): Update to 0.14.
2019-06-17 04:54:05 +02:00
9fea25cf32
gnu: r-polspline: Update to 1.1.15.
...
* gnu/packages/cran.scm (r-polspline): Update to 1.1.15.
2019-06-17 04:54:00 +02:00
663a50e8f9
gnu: r-deldir: Update to 0.1-21.
...
* gnu/packages/cran.scm (r-deldir): Update to 0.1-21.
2019-06-17 04:53:55 +02:00
776c62d1b2
gnu: r-nor1mix: Update to 1.3-0.
...
* gnu/packages/cran.scm (r-nor1mix): Update to 1.3-0.
2019-06-17 04:53:51 +02:00
5cc896546b
gnu: r-tractor-base: Update to 3.3.2.
...
* gnu/packages/cran.scm (r-tractor-base): Update to 3.3.2.
2019-06-17 04:53:47 +02:00
935c6532ac
gnu: r-rspectra: Update to 0.15-0.
...
* gnu/packages/cran.scm (r-rspectra): Update to 0.15-0.
2019-06-17 04:53:42 +02:00
a7794b7243
gnu: r-emmeans: Update to 1.3.5.
...
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.5.
2019-06-17 04:53:37 +02:00
89afd03172
gnu: r-abcrf: Update to 1.8.
...
* gnu/packages/cran.scm (r-abcrf): Update to 1.8.
[propagated-inputs]: Add r-doparallel and r-foreach.
2019-06-17 04:53:20 +02:00
45dcc89de7
gnu: r-sjmisc: Update to 2.8.0.
...
* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.0.
[propagated-inputs]: Remove r-haven; add r-insight.
2019-06-17 04:53:04 +02:00
e0cd8f7340
gnu: r-extradistr: Update to 1.8.11.
...
* gnu/packages/cran.scm (r-extradistr): Update to 1.8.11.
2019-06-17 04:52:57 +02:00
bb6c8f207b
gnu: guile-gi: Update to 0.0.2.
...
* gnu/packages/guile-xyz.scm (guile-gi): Update to 0.0.2.
[source]: Fetch using url-fetch.
[arguments]: Add make flags to remove unexpectedly passing test from
XFAIL_TESTS.
[native-inputs]: Remove autoconf, automake, and texinfo.
2019-06-17 04:52:22 +02:00
d1a3a8e15e
gnu: guile-picture-language: Update to 0.0.1-1-91d10c9.
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* gnu/packages/guile-xyz.scm (guile-picture-language): Update to
0.0.1-1-91d10c9.
[build-system]: Use gnu-build-system.
[native-inputs]: Add autoconf, automake, imagemagick, pkg-config, and texinfo.
2019-06-17 03:06:53 +02:00
58637415be
gnu: youtube-viewer: Refer to youtube-dl.
...
* gnu/packages/video.scm (youtube-viewer)[inputs]: Add youtube-dl.
[arguments]: Add ‘refer-to-inputs’ phase.
2019-06-17 03:04:31 +02:00
a157fb2723
gnu: radare2: Download over HTTPS.
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* gnu/packages/engineering.scm (radare2)[source]: Use HTTPS.
2019-06-17 03:04:31 +02:00
e605820bc5
gnu: radare2: Don't use NAME in source URI.
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* gnu/packages/engineering.scm (radare2)[source]: Hard-code NAME.
2019-06-17 03:04:30 +02:00
935e4b3abd
gnu: nsd: Update to 4.2.0.
...
* gnu/packages/dns.scm (nsd): Update to 4.2.0.
2019-06-17 03:04:30 +02:00
3abc9cc242
gnu: knot: Update to 2.8.2.
...
* gnu/packages/dns.scm (knot): Update to 2.8.2.
2019-06-17 03:04:30 +02:00
8fadac9577
gnu: suil: Update to 0.10.4.
...
* gnu/packages/audio.scm (suil): Update to 0.10.4.
2019-06-17 03:04:30 +02:00
562a2a4095
gnu: Add freeorion
...
* gnu/packages/games.scm (freeorion): New variable.
2019-06-16 21:40:09 +02:00
914bba2809
gnu: docker-compose: Add required Python dependencies.
...
* gnu/packages/python-xyz.scm (python-jsonschema-2.6):
New old public variable.
* gnu/packages/docker.scm (docker-compose)[inputs]:
Add python-docker-pycreds and use python-jsonschema-2.6.
2019-06-16 19:44:42 +02:00
10a3297389
gnu: dstat: Add two patches, fix two bugs.
...
* gnu/packages/admin.scm (dstat)[source]: Add patches.
* gnu/packages/patches/dstat-fix-crash-when-specifying-delay.patch,
gnu/packages/patches/dstat-skip-devices-without-io.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-06-16 19:44:42 +02:00
fa67073f13
gnu: dstat: Fix Python 3 deprecation warning.
...
* gnu/packages/admin.scm (dstat)[arguments]:
Add ‘fix-python3-DeprecationWarning’ phase.
2019-06-16 19:44:42 +02:00
4fce1ff129
gnu: Add font-anonymous-pro-minus.
...
* gnu/packages/fonts.scm (font-anonymous-pro-minus): New public variable.
2019-06-16 19:44:42 +02:00
8bae6c744c
gnu: keepassxc: Update to 2.4.3.
...
* gnu/packages/password-utils.scm (keepassxc): Update to 2.4.3.
2019-06-16 14:26:45 +03:00
86c05c4465
gnu: linux-libre: Update to 5.1.10.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.10.
(%linux-libre-hash): Update hash.
2019-06-16 04:11:07 -04:00
fc6290fb1f
gnu: linux-libre@4.19: Update to 4.19.51.
...
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.51.
(%linux-libre-4.19-hash): Update hash.
2019-06-16 04:09:12 -04:00
466595eeb2
gnu: linux-libre@4.14: Update to 4.14.126.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.126.
(%linux-libre-4.14-hash): Update hash.
2019-06-16 04:08:06 -04:00
b1593c1c4f
gnu: bison: Disable parallel build.
...
Fixes <https://bugs.gnu.org/36238 .
Reported by Carl Dong <contact@carldong.me>.
* gnu/packages/bison.scm (bison)[arguments]: New field.
2019-06-16 09:39:00 +02:00
871dbd6c6e
gnu: cross-base: Fix C++ cross-compilation problems with GCC 7.
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* gnu/packages/cross-base.scm (cross-gcc-arguments)[#:configure-flags]: Add
"--with-sysroot=/".
2019-06-16 09:34:39 +02:00
3f151d90a3
gnu: ghostscript: Update to 9.27.
...
* gnu/packages/ghostscript.scm (ghostscript): Update to 9.27.
[arguments]: Add <#:parallel-tests?>.
2019-06-16 08:20:23 +02:00
b70ffe4e94
gnu: jbig2dec: Update to 0.16.
...
* gnu/packages/image.scm (jbig2dec): Update to 0.16.
2019-06-16 08:19:53 +02:00
7a1d6a7708
gnu: Add waybar.
...
* gnu/packages/wm.scm(waybar): New variable.
2019-06-16 00:29:00 +02:00
e960c20a06
gnu: adb: Build against OpenSSL 1.0.
...
* gnu/packages/android.scm (adb)[inputs]: Change OPENSSL to OPENSSL-1.0.
2019-06-15 23:47:34 +02:00
1a753d5673
gnu: poppler: Update to 0.77.0.
...
* gnu/packages/patches/inkscape-poppler-0.76.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/inkscape.scm (inkscape)[source](patches): New field.
* gnu/packages/patches/texlive-bin-luatex-poppler-compat.patch: Add two new hunks.
* gnu/packages/pdf.scm (poppler): Update to 0.77.0.
* gnu/packages/tex.scm (texlive-bin)[source]: Update Arch patches.
[arguments]: Adjust accordingly.
* gnu/packages/scribus.scm (scribus)[source](patches): Add two new origins.
2019-06-15 23:47:34 +02:00
e9b27c70e3
gnu: texlive-bin: Remove GCC5 workaround.
...
* gnu/packages/tex.scm (texlive-bin)[arguments]: Remove "CXXFLAGS" from
#:configure-flags.
2019-06-15 23:47:34 +02:00
549f4091c1
gnu: libarchive: Update to 3.4.0.
...
* gnu/packages/patches/libarchive-CVE-2018-1000877.patch,
gnu/packages/patches/libarchive-CVE-2018-1000878.patch,
gnu/packages/patches/libarchive-CVE-2018-1000880.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/backup.scm (libarchive): Update to 3.4.0.
[source](uri): Add alternative download location.
[source](patches): Remove.
2019-06-15 23:47:34 +02:00
Efraim Flashner