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Author SHA1 Message Date
Tobias Geerinckx-Rice f75bb2c3f2
gnu: simple-scan: Update to 3.22.0.1. 
* gnu/packages/gnome.scm (simple-scan): Update to 3.22.0.1.
 2016-09-21 01:15:57 +02:00
Alex Vong 8824da4c8b
gnu: vlc: Use liba52. 
* gnu/packages/video.scm (vlc)[inputs]: Add liba52.
[arguments]: Remove "--disable-a52" from #:configure-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-20 15:54:18 -04:00
Efraim Flashner c84253f757
gnu: chez-scheme: Remove arm support. 
* gnu/packages/scheme.scm (chez-scheme)[supported-systems]: Remove arm.
 2016-09-20 22:04:15 +03:00
doncatnip 22037a327a
gnu: awesome: Update to 3.5.9. 
* gnu/packages/wm.scm (awesome): Update to 3.5.9.
[inputs]: Add gobject-introspection, lua-lgi, cairo. Use latest available lua.
[arguments]: Set lua search paths. Add cairo to LD_LIBRARY_PATH. Wrap binary in
respect to those paths plus GI_TYPELIB_PATH.
 2016-09-20 14:58:33 -04:00
doncatnip 03d8505f14
gnu: lua: Add lua-lgi. 
* gnu/packages/lua.scm (lua-lgi): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-20 14:58:32 -04:00
doncatnip c0d47cadea
gnu: lua: Use MYCFLAGS instead of CFLAGS. 
* gnu/packages/lua.scm (lua)[arguments]: Use MYCFLAGS instead of
CFLAGS and remove conflicting -DLUA_USE_POSIX since -DLUA_USE_LINUX
is passed implicitly for build target "linux".

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-20 14:58:29 -04:00
Efraim Flashner e6d58734b6
gnu: chess: Update to 6.2.3. 
* gnu/packages/games.scm (chess): Update to 6.2.3.
 2016-09-20 21:41:14 +03:00
Dylan Jeffers b04a52a6ff
gnu: Add python-requests-oauthlib. 
* gnu/packages/python.scm (python-requests-oauthlib,
python2-requests-oauthlib): New variables.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-20 21:27:56 +03:00
John Darrington be86b7adbc
gnu: Add bind 
* gnu/packags/dns.scm (bind): New variable, (bind-utils): Remove.
 2016-09-20 18:55:52 +02:00
Ludovic Courtès e465d9e190
ui: Do not shadow '_' where it's used as a literal syntax match. 
Fixes compilation with Guile 2.1.
Reported by Mu Lei.

* guix/ui.scm (report-load-error)
(warn-about-load-error, read/eval-package-expression): Use 'rest'
instead of '_' as the pattern variable name.
* gnu/packages.scm (%find-package): Likewise.
* guix/scripts/build.scm (transform-package-inputs): Likewise.
* guix/scripts/hash.scm (guix-hash): Likewise.
* guix/scripts/import/gnu.scm (%options, guix-import-gnu): Likewise.
* guix/scripts/import/nix.scm (guix-import-nix): Likewise.
* guix/scripts/offload.scm (build-machines): Likewise.
* guix/scripts/refresh.scm (%options): Likewise.
* guix/scripts/substitute.scm (narinfo-signature->canonical-sexp):
Likewise.
 2016-09-20 23:22:42 +09:00
Ludovic Courtès 232ccbefc0
services: Use 'source-module-closure' for (gnu build activation). 
* gnu/services.scm (activation-script)[%modules]: Remove.
Use 'source-module-closure' instead.
 2016-09-20 22:42:11 +09:00
Efraim Flashner 92330ba90d
gnu: efl: Remove hardcoding pulseaudio and libsndfile. 
* gnu/packages/enlightenment.scm (efl)[arguments]: Remove custom phase
to hardlink to the locations of pulseaudio and libsndfile.
 2016-09-20 11:32:08 +03:00
Mark H Weaver 846b2534df
gnu: emacs: Update to 25.1. 
* gnu/packages/emacs.scm (emacs): Update to 25.1.
 2016-09-19 23:45:25 -04:00
Mark H Weaver 6509a1e1e0
gnu: linux-libre: Update to 4.7.4. 
* gnu/packages/linux.scm (linux-libre)
(%linux-libre-version, %linux-libre-hash): Update to 4.7.4.
 2016-09-19 18:42:29 -04:00
Mark H Weaver a8b9c575aa
gnu: linux-libre@4.4: Update to 4.4.21. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.21.
 2016-09-19 18:40:59 -04:00
Mark H Weaver 55ac38f986
gnu: linux-libre@4.1: Update to 4.1.33. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.33.
 2016-09-19 18:37:22 -04:00
Nicolas Goaziou 006a832ccb
gnu: emacs-org: Update to 20160912. 
* gnu/packages/emacs.scm (emacs-org): Update to 20160912.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-19 23:35:48 +03:00
Efraim Flashner 8120205ccd
gnu: python2-cov-core: Use strip-python2-variant. 
* gnu/packages/python.scm (python-cov-core)[properties]: New field,
declare python2-variant.
(python2-cov-core): Use strip-python2-variant.
 2016-09-19 23:25:01 +03:00
Leo Famulari d404a6f971
gnu: gnupg: Fix test failure. 
* gnu/packages/patches/gnupg-fix-expired-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (gnupg): Use it.
 2016-09-19 16:09:56 -04:00
Hartmut Goebel dfdaea32e9
gnu: python-django, python2-django: Fix propagated- and native-inputs. 
setuptools is a run-time dependency (sic!), all others are required
for testing only.

* gnu/packages/django.scm (python-django) [propagated-inputs,
  native-inputs]: Exchange them. Move tzdata to new native-inputs.
  Enhance comments.
  (python2-django) [propagated-inputs] change into native-inputs.
  Enhance comment.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-19 23:41:23 +09:00
Ludovic Courtès 4a84a48742
services: console-font: A single service handles all the VTs. 
* gnu/services/base.scm (%default-console-font): New variable.
(console-font-shepherd-services): New procedure.
(console-font-service-type): Change to use 'service-type'.
(console-font-service): Rewrite using 'simple-service'.
(%base-services): Use a single CONSOLE-FONT-SERVICE-TYPE instance.
* gnu/system/install.scm (installation-services): Likewise.
 2016-09-19 23:36:17 +09:00
Ludovic Courtès 71654dfdda
services: Add 'simple-service'. 
* gnu/services.scm (simple-service): New procedure.
* doc/guix.texi (Service Reference): Document it.
 2016-09-19 23:11:19 +09:00
Efraim Flashner bf307a7a54
gnu: efl: Add recommended build flags. 
* gnu/packages/enlightenment.scm (efl)[inputs]: Add libwebp.
[arguments]: Add configure-flags to enable xinput22, image-loader-webp,
multisense, opengl with egl support.
 2016-09-19 15:46:34 +03:00
Efraim Flashner 5de2a99e79
gnu: efl: Update to 1.18.1. 
* gnu/packages/enlightenment.scm (efl): Update to 1.18.1.
 2016-09-19 15:46:33 +03:00
Efraim Flashner 6f27fbd807
gnu: ffmpeg@2.8: Update to 2.8.8. 
* gnu/packages/video.scm (ffmpeg@2.8): Update to 2.8.8.
 2016-09-19 15:46:26 +03:00
宋文武 6b87c10f58
gnu: Add Mr. Rescue. 
* gnu/packages/games.scm (mrrescue): New variable.
 2016-09-19 19:24:18 +08:00
Roel Janssen eb24341ffb
gnu: Add r-biocinstaller. 
* gnu/packages/bioinformatics.scm (r-biocinstaller): New variable.
 2016-09-19 11:56:44 +02:00
ng0 c2c84add54
gnu: racket: Update to 6.6 
* gnu/packages/scheme.scm (racket): Update to 6.6.
 2016-09-19 11:53:30 +02:00
Ben Woodcroft de96ea286d
gnu: python-biom-format: Move inputs to propagated-inputs. 
* gnu/packages/bioinformatics.scm (python-biom-format, python2-biom-format)
[inputs]: Move all from here ...
[propagated-inputs]: ... to here.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft 7bba95b769
gnu: seqmagick: Use BioPython 1.66. 
* gnu/packages/bioinformatics.scm (seqmagick)[inputs]: Use
python2-biopython-1.66 instead of python2-biopython.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft 4b1a152826
gnu: Add python2-biopython-1.66. 
* gnu/packages/bioinformatics.scm (python2-biopython-1.66): New variable.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft 8c8da1389e
gnu: python-biopython: Use 'python2-variant'. 
* gnu/packages/bioinformatics.scm (python-biopython)[properties]: New field.
[native-inputs]: Remove field.
(python-biopython): Use 'strip-python-variant'.
 2016-09-19 15:44:20 +10:00
Ben Woodcroft 4ce6030588
gnu: python-biopython: Update to 1.68. 
* gnu/packages/bioinformatics.scm (python-biopython): Update to 1.68.
[arguments]: New field.
 2016-09-19 15:44:18 +10:00
Nicolas Goaziou ded5d02bd0
gnu: wireshark: Update to 2.2.0. 
* gnu/packages/networking.scm (wireshark): Update to 2.2.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-18 21:03:48 -04:00
Efraim Flashner c4605e4c97
gnu: onionshare: Fix build. 
This commit is a follow-up to b8ea5204ab.

* gnu/packages/tor.scm: Add 'gpl3+' to guix-licenses import, Add
python-build-system.
(onionshare)[licenses]: Remove license namespace.
 2016-09-18 23:27:36 +03:00
Efraim Flashner b8ea5204ab
gnu: Add onionshare. 
* gnu/packages/tor.scm (onionshare): New variable.
* gnu/packages/patches/onionshare-fix-install-paths.patch: New variable.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-18 23:19:46 +03:00
Efraim Flashner d488d5d65b
gnu: Add python-nautilus. 
* gnu/packages/python.scm (python-nautilus): New variable.
 2016-09-18 23:19:46 +03:00
Efraim Flashner 153e58c568
gnu: Add python-bcrypt. 
* gnu/packages/password-utils.scm (python-bcrypt): New variable.
 2016-09-18 23:19:46 +03:00
Efraim Flashner 0aea283a65
gnu: Add python-nose2. 
* gnu/packages/python.scm (python-nose2): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner 12f839fdf6
gnu: Add python-cov-core. 
* gnu/packages/python.scm (python-cov-core): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner 257023978a
gnu: Add python-consul. 
* gnu/packages/python.scm (python-consul): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner ddc63a5611
gnu: Add python-graphene. 
* gnu/packages/python.scm (python-graphene): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner 894810c7c9
gnu: Add python-django-filter. 
* gnu/packages/django.scm (python-django-filter): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner 23b563dcfd
gnu: Add python-pytest-django. 
* gnu/packages/django.scm (python-pytest-django): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner de2966cfe8
gnu: Add python-sqlalchemy-utils. 
* gnu/packages/python.scm (python-sqlalchemy-utils): New variable.
 2016-09-18 23:19:45 +03:00
Efraim Flashner 7ee5157579
gnu: Add python-graphql-relay. 
* gnu/packages/python.scm (python-graphql-relay): New variable.
 2016-09-18 23:19:44 +03:00
Efraim Flashner 05b7a59336
gnu: Add python-graphql-core. 
* gnu/packages/python.scm (python-graphql-core): New variable.
 2016-09-18 23:19:44 +03:00
Efraim Flashner 44547e5153
gnu: Add python-pytest-mock. 
* gnu/packages/python.scm (python-pytest-mock): New variable.
 2016-09-18 23:19:44 +03:00
Efraim Flashner 5cb2fe446b
gnu: Add python-promise. 
* gnu/packages/python.scm (python-promise): New variable.
 2016-09-18 23:19:44 +03:00
Efraim Flashner 4d98bfaf23
gnu: Add python-peewee. 
* gnu/packages/databases.scm (python-peewee): New variable.
 2016-09-18 23:19:44 +03:00
Efraim Flashner 4d3fa5a421
gnu: Add python-pika. 
* gnu/packages/python.scm (python-pika): New variable.
 2016-09-18 23:19:43 +03:00
Efraim Flashner bff8be80c9
gnu: xorriso: Update to 1.4.6. 
* gnu/packages/cdrom.scm (xorriso): Update to 1.4.6.
 2016-09-18 23:14:02 +03:00
Efraim Flashner 0bb9461506
gnu: autoconf-archive: Update to 2016.09.16. 
* gnu/packages/autotools.scm (autoconf-archive): Update to 2016.09.16.
 2016-09-18 18:10:10 +03:00
John Darrington e4360e16f9
gnu: gtk+ use modify-phases 
* gnu/packages/gtk.scm (arguments): Replace alist-cons-before with modify-phases
 2016-09-18 14:42:26 +02:00
John Darrington 5d87088c39
gnu: Add sendmail 
* gnu/packages/mail.scm (sendmail): New variable.
 2016-09-18 09:40:44 +02:00
Stefan Reichoer 4efb9c5478
gnu: Add python-glances. 
* gnu/packages/python.scm (python-glances, python2-glances): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-17 19:17:54 -04:00
Leo Famulari 082138e953
gnu: diffoscope: Update to 60. 
* gnu/packages/package-management.scm (diffoscope): Update to 60.
 2016-09-17 19:02:42 -04:00
Rene Saavedra 6aeaba8917
gnu: gnome-session: Update to 3.20.2. 
* gnu/packages/gnome.scm (gnome-session): Update to 3.20.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-17 17:01:00 -04:00
John Darrington 8f65585b14
doc: "filesystem" -> "file system" 
* doc/guix.texi: "filesystem" -> "file system"
* gnu/packages/admin.scm: "filesystem" -> "file system"
* gnu/packages/cdrom.scm: "filesystem" -> "file system"
* gnu/packages/compression.scm: "filesystem" -> "file system"
* gnu/packages/disk.scm: "filesystem" -> "file system"
* gnu/packages/gnome.scm: "filesystem" -> "file system"
* gnu/packages/irc.scm: "filesystem" -> "file system"
* gnu/packages/linux.scm: "filesystem" -> "file system"
* gnu/packages/mail.scm: "filesystem" -> "file system"
* gnu/packages/mpd.scm: "filesystem" -> "file system"
* gnu/packages/ocaml.scm: "filesystem" -> "file system"
* gnu/packages/perl.scm: "filesystem" -> "file system"
* gnu/packages/python.scm: "filesystem" -> "file system"
* gnu/packages/search.scm: "filesystem" -> "file system"
* gnu/packages/tls.scm: "filesystem" -> "file system"
* gnu/services/mail.scm: "filesystem" -> "file system"
 2016-09-16 18:16:13 +02:00
Ricardo Wurmus 9159562441
gnu: Add Extempore. 
* gnu/packages/music.scm (extempore): New variable.
 2016-09-16 17:31:12 +02:00
Ricardo Wurmus 38098bf7b4
gnu: Add portmidi-for-extempore. 
* gnu/packages/music.scm (portmidi-for-extempore): New variable.
 2016-09-16 17:31:12 +02:00
Ricardo Wurmus 2a9b10c7cd
gnu: Add kiss-fft-for-extempore. 
* gnu/packages/algebra.scm (kiss-fft-for-extempore): New variable.
 2016-09-16 17:31:12 +02:00
Ricardo Wurmus 921cb13a96
gnu: Add llvm-for-extempore. 
* gnu/packages/llvm.scm (llvm-for-extempore): New variable.
* gnu/packages/patches/llvm-for-extempore.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-09-16 17:31:12 +02:00
Ricardo Wurmus ac2a38a59a
gnu: Add stb-image-for-extempore. 
* gnu/packages/image.scm (stb-image-for-extempore): New variable.
 2016-09-16 17:31:11 +02:00
Ricardo Wurmus 5a82f933f3
gnu: Add assimp. 
* gnu/packages/graphics.scm (assimp): New variable.
 2016-09-16 17:31:11 +02:00
Ricardo Wurmus 78acbcb53f
gnu: Add nanovg-for-extempore. 
* gnu/packages/gl.scm (nanovg-for-extempore): New variable.
 2016-09-16 17:31:11 +02:00
Ricardo Wurmus c533589c66
gnu: Add r-e1071. 
* gnu/packages/statistics.scm (r-e1071): New variable.
 2016-09-16 17:29:48 +02:00
Ricardo Wurmus c72c12491a
gnu: Add r-rtsne. 
* gnu/packages/statistics.scm (r-rtsne): New variable.
 2016-09-16 17:29:48 +02:00
Brendan Tildesley f6875394a6
gnu: Add par2cmdline. 
* gnu/packages/backup.scm (par2cmdline): New variable.
 2016-09-15 22:39:31 -05:00
Tobias Geerinckx-Rice 7f39e13180
gnu: prosody: Don't generate example SSL certificates. 
They are non-deterministic and of questionable utility.

* gnu/packages/messaging.scm (prosody)[arguments]: Add #:configure-flags.
 2016-09-16 01:54:00 +02:00
Tobias Geerinckx-Rice 9bd259d82d
gnu: polipo: Use 'modify-phases'. 
* gnu/packages/web.scm (polipo)[arguments]: Use 'modify-phases'.
 2016-09-16 01:54:00 +02:00
Tobias Geerinckx-Rice 60880ac556
gnu: iodine: Use net-tools' ifconfig with an absolute path. 
* gnu/packages/networking.scm (iodine)[arguments]: Add fix-ifconfig-path
phase.
[inputs]: Add net-tools.
 2016-09-16 01:53:51 +02:00
Tobias Geerinckx-Rice 71af71dc74
gnu: hexchat: Update to 2.12.1. 
* gnu/packages/messaging.scm (hexchat): Update to 2.12.1.
[inputs]: Add luajit.
[description]: Wrap to <=80 characters.
 2016-09-16 01:49:13 +02:00
Tobias Geerinckx-Rice dd65f3b744
gnu: Add mcelog. 
* gnu/packages/linux.scm (mcelog): New variable.
 2016-09-16 01:49:13 +02:00
David Craven 25847b327e
gnu: kernel-config: Find configuration file for i686. 
* gnu/packages/linux.scm (kernel-config): Find configuration file for
  i686.
  (make-linux-libre)[origin]: Apply patch correctly.
 2016-09-15 21:57:51 +02:00
Ludovic Courtès 4a187c556d
gnu: chibi-scheme: Use 'modify-phases'. 
* gnu/packages/scheme.scm (chibi-scheme)[arguments]: Use
'modify-phases'.
 2016-09-15 18:56:41 +02:00
Arun Isaac 797a5cf57f
gnu: Add darkhttpd. 
* gnu/packages/web.scm (darkhttpd): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-15 11:23:01 -04:00
Vincent Legoll d002121b5e
gnu: nss-certs and nss: Update to 3.26 
* gnu/packages/certs.scm (nss-certs): Update to 3.26.
* gnu/packages/gnuzilla.scm (nss): Update to 3.26.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-15 09:43:09 -04:00
宋文武 ab179eaf98
gnu: Add gnome-dictionary. 
* gnu/packages/gnome.scm (gnome-dictionary): New variable.
 2016-09-15 15:48:26 +08:00
Marius Bakke 5467ea6200
gnu: Add python-natsort. 
* gnu/packages/python.scm (python-natsort, python2-natsort): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 20:56:02 -04:00
Marius Bakke df94a6b57d
gnu: Add python-pytest-flakes. 
* gnu/packages/python.scm (python-pytest-flakes, python2-pytest-flakes):
  New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 20:56:02 -04:00
Marius Bakke 66f95b209a
gnu: Add python-pytest-pep8. 
* gnu/packages/python.scm (python-pytest-pep8, python2-pytest-pep8): New
  variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 20:55:58 -04:00
ng0 74c0282c45
gnu: Add mhonarc. 
* gnu/packages/mail.scm (mhonarc): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 17:32:07 -04:00
ng0 991847748a
gnu: gnurl: Update to 7.50.3. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.50.3.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 16:38:08 -04:00
Jan Nieuwenhuizen 253745d756
gnu: hydra: Update to 20151030.1ff48da. 
* gnu/packages/ci.scm (hydra): Update to 20151030.1ff48da (fixes building with
nix-1.11.x).
[source]: Remove 'hydra-automake-1.15.patch'.
[inputs]: Add libpqxx and perl-net-statsd.
* gnu/packages/patches/hydra-automake-1.15.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 15:43:07 -04:00
Jan Nieuwenhuizen fe71eee076
gnu: Add libpqxx. 
* gnu/packages/databases.scm (libpqxx): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 15:43:06 -04:00
Jan Nieuwenhuizen 16c6a01e3f
gnu: Add perl-net-statsd. 
* gnu/packages/perl.scm (perl-net-statsd): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 15:43:06 -04:00
Jan Nieuwenhuizen 49735d8de1
gnu: perl-image-magick: Disable tests. 
* gnu/packages/imagemagick.scm (perl-image-magick)[arguments]: Add #:tests?.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 15:43:06 -04:00
Jan Nieuwenhuizen 2792a6b470
gnu: perl-gd: Disable tests. 
* gnu/packages/gd.scm (perl-gd)[arguments]: Add #:tests?.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-14 15:43:02 -04:00
Efraim Flashner 6ea541e016
gnu: links: Use 'modify-phases'. 
* gnu/packages/links.scm (links)[arguments]: Use 'modify-phases'.
 2016-09-14 22:04:50 +03:00
Efraim Flashner 7ddacf88ef
gnu: links: Update to 2.13. 
* gnu/packages/links.scm (links): Update to 2.13.
 2016-09-14 22:02:40 +03:00
Leo Famulari 2a0ed3254b
gnu: curl: Update replacement to 7.50.3 [fixes CVE-2016-7167]. 
* gnu/packages/curl.scm (curl)[replacement]: Update to 7.50.3.
(curl-7.50.2): Replace with ....
(curl-7.50.3): ... this.
 2016-09-14 14:12:04 -04:00
Leo Famulari b5b2c11b5e
gnu: mariadb: Update to 10.1.17 [fixes CVE-2016-6662 ]. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.17.
 2016-09-14 13:52:19 -04:00
Leo Famulari 362bc747a2
gnu: mysql: Update to 5.7.15 [fixes CVE-2016-6662]. 
* gnu/packages/databases.scm (mysql): Update to 5.7.15.
[source]: Remove obsolete 'mysql-fix-failing-test.patch'.
* gnu/packages/patches/mysql-fix-failing-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-09-14 13:52:18 -04:00
David Thompson ddda5338b8
gnu: guile-next: Update to 2.1.4. 
* gnu/packages/guile.scm (guile-next): Update to 2.1.4.
 2016-09-14 11:14:47 -04:00
Christopher Baines 8bebe734ca
gnu: Add emacs-es-mode. 
* gnu/packages/emacs.scm (emacs-es-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-14 16:36:38 +02:00
Tobias Geerinckx-Rice 271447ff8e
gnu: Remove unused, obsolete, private rlog. 
* gnu/packages/crypto.scm (rlog): Remove variable.
 2016-09-14 13:02:53 +02:00
Tobias Geerinckx-Rice b6f87ec003
gnu: encfs: Update to 1.9. 
* gnu/packages/crypto.scm (encfs): Update to 1.9.
[source]: Remove bundled TinyXML2 in a snippet.
[build-system]: Switch to cmake-build-system.
[arguments]: Remove autotools-related phases and configure-flags.
Don't use bundled TinyXML2. Move under *inputs.
[native-inputs]: Remove autoconf, automake, libtool, and pkg-config.
Add expect.
[inputs]: Remove boost and rlog, while adding attr and tinyxml2.
[license]: Add expat licence for new easylogging++.h file.
 2016-09-14 13:02:53 +02:00
Tobias Geerinckx-Rice 931bd7f6ce
gnu: Add tinyxml2. 
* gnu/packages/xml.scm (tinyxml2): New variable.
 2016-09-14 13:02:53 +02:00
Christopher Baines 76f31f0b2c
gnu: Add direnv. 
* gnu/packages/shellutils.scm (direnv): New variable.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
 2016-09-14 15:47:19 +08:00
Ricardo Wurmus 85313be89d
gnu: Add guile2.2-redis. 
* gnu/packages/guile.scm (guile2.2-redis): New variable.
 2016-09-14 09:01:26 +02:00
Ricardo Wurmus ea833d301b
gnu: guile-redis: Remove hard-coded Guile effective version. 
* gnu/packages/guile.scm (guile-redis)[snippet]: Modify 'ac_subst_vars'
in 'configure', and use "@GUILE_EFFECTIVE_VERSION@" instead of "2.0" in
'Makefile.in'.
 2016-09-14 09:01:21 +02:00
Leo Famulari b1a782b11a
gnu: expat: Update to 2.2.0. 
* gnu/packages/xml.scm (expat): Update to 2.2.0.
[source]: Use 'expat-CVE-2016-0718-fix-regression.patch'. Remove obsolete
patches.
* gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: New file.
* gnu/packages/patches/expat-CVE-2012-6702-and-CVE-2016-5300.patch,
gnu/packages/patches/expat-CVE-2015-1283-refix.patch,
gnu/packages/patches/expat-CVE-2016-0718.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Add and remove patches.
 2016-09-13 20:37:33 -04:00
David Craven d6feaf6e8f
gnu: kernel-config: Remove redundant file-exists? check. 
* gnu/packages/linux.scm (kernel-config): Remove redundant file-exists?
  check.
 2016-09-13 22:48:00 +02:00
David Craven 0b75986983
gnu: make-linux-libre: Only use configuration-file when one is provided. 
* gnu/packages/linux.scm (make-linux-libre): Only use configuration-file
  when one is provided.
 2016-09-13 22:48:00 +02:00
ng0 995e5092d8
gnu: Add femtolisp. 
* gnu/packages/lisp.scm (femtolisp): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 15:38:00 -04:00
Danny Milosavljevic 812b3c1f8a
gnu: ldc: Fix build failure. 
* gnu/packages/ldc.scm (ldc)[arguments]: Add 'patch-dmd2' phase.
[inputs]: Add zlib.
[native-inputs]: Specify version 3.7 of LLVM and Clang.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 15:24:55 -04:00
John Darrington f26dd9b2cc
gnu: Add microcom 
* gnu/packages/microcom.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-09-13 21:05:13 +02:00
David Craven 035d359338
gnu: module-init-tools: Move to (gnu packages linux). 
* gnu/packages/linux.scm (module-init-tools): Move.
 2016-09-13 21:01:27 +02:00
David Craven cff0adec0c
gnu: libnfsidmap: Move to (gnu packages linux). 
* gnu/packages/linux.scm (libnfsidmap): Move.
 2016-09-13 21:01:27 +02:00
David Craven de459dc095
gnu: Add linux-libre-beagle-bone-black. 
* gnu/packages/linux.scm (linux-libre-beagle-bone-black): New variable.
 2016-09-13 21:01:27 +02:00
David Craven cde7c23f15
gnu: Add linux-libre-arm-generic. 
* gnu/packages/linux.scm (linux-libre-arm-generic): New variable.
 2016-09-13 21:01:27 +02:00
David Craven 78edccccaf
gnu: linux-libre: Use kmod. 
* gnu/packages/linux.scm (make-linux-libre): Use kmod.
 2016-09-13 21:01:27 +02:00
David Craven 3129b9c2b1
gnu: make-linux-libre: Add supported-systems parameter. 
* gnu/packages/linux.scm (make-linux-libre): Add supported-systems
  parameter.
 2016-09-13 21:01:27 +02:00
David Craven fd6e0de3c0
gnu: make-linux-libre: Add zImage to output. 
* gnu/packages/linux.scm (make-linux-libre): Add zImage to output.
 2016-09-13 21:01:27 +02:00
David Craven a6d0132514
gnu: make-linux-libre: Add extra-version parameter. 
* gnu/packages/linux.scm (make-linux-libre): Add extra-version option.
 2016-09-13 21:01:27 +02:00
David Craven 90c18c321e
gnu: make-linux-libre: Add extra-options parameter. 
* gnu/packages/linux.scm (linux-libre): Use
  %default-extra-linux-options.
  (config->string, %default-extra-linux-options): New variables.
 2016-09-13 21:01:27 +02:00
David Craven c258807a85
gnu: Use make-linux-libre. 
* gnu/packages/linux.scm (make-linux-libre): New variable.
  (linux-libre, linux-libre-4.4, linux-libre-4.1): Use make-linux-libre.
  (kernel-config): Take arch instead of system.
 2016-09-13 21:01:27 +02:00
ng0 0a1d8596fd
gnu: lispf4: Remove unused inputs key. 
* gnu/packages/lisp.scm (lispf4)[arguments]: Remove unused
inputs key from 'install' phase.
[source](file-name): Append "-checkout" to the file-name.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 15:00:02 -04:00
David Craven 8feb56b0d4
gnu: u-boot-vexpress_ca9x4: Rename to u-boot-vexpress. 
* gnu/packages/u-boot.scm (u-boot-vexpress_ca9x4): Rename.
 2016-09-13 19:04:43 +02:00
David Craven 20f9c6764c
gnu: Add u-boot-beagle-bone-black. 
* gnu/packages/u-boot.scm (u-boot-beagle-bone-black): New variable.
 2016-09-13 19:04:43 +02:00
Danny Milosavljevic e42a0771b7
gnu: dtc: Remove patch-paths phase. 
* gnu/packages/u-boot.scm (dtc)[arguments]: Remove patch-paths phase.
  [configure-flags]: Add INSTALL.

Signed-off-by: David Craven <david@craven.ch>
 2016-09-13 19:04:43 +02:00
Danny Milosavljevic 243db8245e
gnu: Add python-lit, python2-lit. 
* gnu/packages/python.scm (python-lit, python2-lit): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 12:41:44 -04:00
Tobias Geerinckx-Rice d15e2ef05a
gnu: python-prompt-toolkit: Update to 1.0.7. 
* gnu/packages/python.scm (python-prompt-toolkit): Update to 1.0.7.
[source]: Use 'pypi-uri'.
 2016-09-13 17:03:42 +02:00
Tobias Geerinckx-Rice c033c1958d
gnu: ruby: Remove string-append call with single argument. 
* gnu/packages/ruby.scm (ruby)[source]: Remove string-append.
 2016-09-13 16:48:44 +02:00
Tobias Geerinckx-Rice 05077200f7
gnu: tinyxml: Fix typo in description. 
* gnu/packages/xml.scm (tinyxml)[description]: Fix typo.
 2016-09-13 16:48:44 +02:00
Tobias Geerinckx-Rice d21047d504
services: nginx: Actually check if configuration is valid. 
* gnu/services/web.scm (nginx-activation): Fix path to nginx binary.
 2016-09-13 16:48:44 +02:00
David Craven 4b42703ed5
gnu: linux-libre: Add support for cross-compilation. 
* gnu/packages/linux.scm (linux-libre): Add support for
  cross-compilation.
 2016-09-13 16:45:41 +02:00
David Craven 9416459b72
gnu: linux-libre: Move kernel configuration to configure phase. 
* gnu/packages/linux.scm (linux-libre)[arguments]: Add configure phase.
 2016-09-13 16:45:41 +02:00
David Craven 499fb7e0ba
gnu: linux-libre: Apply %boot-logo patch in origin. 
* gnu/packages/linux.scm (linux-libre)[origin]: Apply %boot-logo patch
  in origin.
 2016-09-13 16:45:41 +02:00
David Craven 6d7ef2aad2
gnu: linux-libre: Use system->architecture. 
* gnu/packages/linux.scm (linux-libre): Use system->architecture.
 2016-09-13 16:45:41 +02:00
David Craven 614d1738e2
gnu: linux-libre: Use modify-phases. 
* gnu/packages/linux.scm (linux-libre): Use modify-phases.
 2016-09-13 16:45:41 +02:00
David Craven 885009c5b9
gnu: module-init-tools: Prevent line wrapping. 
* gnu/packages/linux.scm (module-init-tools): Break line.
 2016-09-13 16:45:41 +02:00
Kei Kebreau 89bcf3fcc9
gnu: Add schismtracker. 
* gnu/packages/music.scm (schismtracker): New variable.
 2016-09-13 10:31:40 -04:00
Alex ter Weele 23de5cbd14
gnu: guile-wm: Add '.desktop' file. 
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Add
'install-xsession' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 14:01:27 +02:00
Ben J Woodcroft 66daf78c0a
gnu: Add seqtk. 
* gnu/packages/bioinformatics.scm (seqtk): New variable.
 2016-09-13 20:27:29 +10:00
Andy Patterson 6c0cd765c0
gnu: libbluray: Enable libaacs and libbdplus support. 
* gnu/packages/video.scm (libbluray) [inputs]: Add libaacs and
libbdplus.
[arguments]: Add 'fix-dlopen-paths' to #:phases.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 10:26:35 +02:00
Andy Patterson 8dd6fc5164
gnu: Add libaacs. 
* gnu/packages/video.scm (libaacs): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 10:26:35 +02:00
Andy Patterson 4df0762248
gnu: Add libbdplus. 
* gnu/packages/video.scm (libbdplus): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-13 10:26:35 +02:00
Marius Bakke 4fba38db9c
gnu: dlib: Disable failing tests. 
* gnu/packages/machine-learning.scm (dlib)[arguments]: Add phase
'disable-failing-tests' for tests that are known not to work in the current
release.
[inputs]: Add lapack.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 01:12:42 -04:00
Marius Bakke 8eaf53e366
gnu: dlib: Do not build dlib twice for tests. 
* gnu/packages/machine-learning.scm (dlib)[arguments]: Use makefile
instead of cmake in check phase to prevent full rebuild.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 01:12:42 -04:00
Marius Bakke f40841e999
gnu: dlib: Remove unused fftw from inputs. 
* gnu/packages/machine-learning.scm (dlib)[inputs]: Remove fftw.
(define-module): Don't include algebra.scm.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-13 01:12:42 -04:00
Leo Famulari 883d0a7d25
gnu: openblas: Update to 0.2.19. 
* gnu/packages/maths.scm (openblas): Update to 0.2.19.
 2016-09-13 00:50:13 -04:00
Ivan Vilata-i-Balaguer d2262d7052
gnu: python-py3status: Update to 3.1. 
* gnu/packages/python.scm (python-py3status): Update to 3.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-12 16:48:44 -04:00
Efraim Flashner 4f6ec7e800
gnu: youtube-dl: Update to 2016.09.11.1. 
* gnu/packages/video.scm (youtube-dl): Update to 2016.09.11.1.
 2016-09-12 22:34:24 +03:00
Efraim Flashner f34365b53e
gnu: mpv: Remove extra input. 
* gnu/packages/video.scm (mpv)[inputs]: Remove vapoursynth.
 2016-09-12 22:31:15 +03:00
Efraim Flashner 9a078f4863
gnu: vapoursynth: Remove mips support. 
* gnu/packages/video.scm (vapoursynth)[supported-systems]: New field,
remove support for mips64el which is unsupported.
 2016-09-12 22:29:35 +03:00
Efraim Flashner f51940b0f5
gnu: vim: Make builds bit-reproducable. 
* gnu/packages/vim.scm (vim)[arguments]: Remove the compiled date.
 2016-09-12 21:54:05 +03:00
Efraim Flashner db3cc007e3
gnu: vim: Update to 8.0. 
* gnu/packages/vim.scm (vim): Update to 8.0.
[arguments]: Update files which need /bin/sh patched.
 2016-09-12 21:54:04 +03:00
Leo Famulari 2642231b39
gnu: bowtie: Update to 2.2.9. 
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.2.9.
 2016-09-12 14:19:37 -04:00
Leo Famulari d8a1be6328
gnu: certbot: Improve synopsis. 
* gnu/packages/tls.scm (certbot)[synopsis]: Add authorship information.
 2016-09-12 13:05:42 -04:00
Leo Famulari 0581c273a4
gnu: Add acme-client. 
* gnu/packages/tls.scm (acme-client): New variable.
 2016-09-12 13:05:42 -04:00
Leo Famulari 974e2b2971
gnu: gnutls: Replace with 3.5.4 [fixes GNUTLS-SA-2016-3]. 
* gnu/packages/tls.scm (gnutls)[replacement]: New field.
(gnutls-3.5.4): New variable.
 2016-09-12 12:30:33 -04:00
Ludovic Courtès e7e43727ce
gnu: gcc: Work around ARM bootstrapping failure (GCC bug #71399). 
* gnu/packages/patches/gcc-arm-bug-71399.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gcc.scm (gcc-4.9)[source]: Use it.
 2016-09-12 18:20:50 +02:00
John Darrington e9aba1ea33
gnu: Add nfs-utils 
* gnu/packages/nfs.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-09-12 18:17:57 +02:00
Ricardo Wurmus d108c21228
gnu: r-org-mm-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.3.0.
 2016-09-12 17:44:49 +02:00
Ricardo Wurmus 6ab7ca24f2
gnu: r-org-dm-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 019be09060
gnu: r-org-ce-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 5cc7cff6ef
gnu: r-org-hs-eg-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 401528b2b5
gnu: r-go-db: Update to 3.3.0. 
* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.3.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 87a7c55ebd
gnu: r-rmarkdown: Update to 1.0. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.0.
[propagated-inputs]: Add "r-jsonlite" and "r-base64enc".
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus de1eebd7d7
gnu: r-dplyr: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.5.0.
 2016-09-12 17:44:48 +02:00
Ricardo Wurmus 5e67507273
gnu: r-rcpparmadillo: Update to 0.7.400.2.0. 
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.400.2.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.400.2.0.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus 1b7f85f52d
gnu: r-tidyr: Update to 0.6.0. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.6.0.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus c3253ce1b5
gnu: r-irlba: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.1.1.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus f791b689b2
gnu: r-dt: Update to 0.2. 
* gnu/packages/statistics.scm (r-dt): Update to 0.2.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus 7931531a23
gnu: r-sparsem: Update to 1.72. 
* gnu/packages/statistics.scm (r-sparsem): Update to 1.72.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus b9ab3b08b8
gnu: r-lambda-r: Update to 1.1.9. 
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.1.9.
 2016-09-12 17:44:47 +02:00
Ricardo Wurmus 27f10d3db2
gnu: r-futile-logger: Update to 1.4.3. 
* gnu/packages/statistics.scm (r-futile-logger): Update to 1.4.3.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus fce4dfd82e
gnu: r-lattice: Update to 0.20-34. 
* gnu/packages/statistics.scm (r-lattice): Update to 0.20-34.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus bdfc2c954e
gnu: r-plotrix: Update to 3.6-3. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-3.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus 8c6e2b843e
gnu: r-readr: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-readr): Update to 1.0.0.
[propagated-inputs]: Add "r-hms", "r-tibble", and "r-r6".
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus b90314b4f8
gnu: Add r-hms. 
* gnu/packages/statistics.scm (r-hms): New variable.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus a589acfb08
gnu: Add r-tibble. 
* gnu/packages/statistics.scm (r-tibble): New variable.
 2016-09-12 17:44:46 +02:00
Ricardo Wurmus 348bb8d663
gnu: r-withr: Update to 1.0.2. 
* gnu/packages/statistics.scm (r-withr): Update to 1.0.2.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 3bb9708a7f
gnu: r-devtools: Update to 1.12.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.12.0.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus e2cfac445e
gnu: r-rstudioapi: Update to 0.6. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.6.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus e58498b6ee
gnu: r-httr: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-httr): Update to 1.2.1.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 130c3c8b93
gnu: r-openssl: Update to 0.9.4. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.4.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 81147fe886
gnu: r-rversions: Update to 1.0.3. 
* gnu/packages/statistics.scm (r-rversions): Update to 1.0.3.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus 03306201a7
gnu: r-multitaper: Update to 1.0-12. 
* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-12.
 2016-09-12 17:44:45 +02:00
Ricardo Wurmus e2ad0228fc
gnu: r-xml2: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.0.0.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus ef82bd5888
gnu: r-r6: Update to 2.1.3. 
* gnu/packages/statistics.scm (r-r6): Update to 2.1.3.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus 344d5323d6
gnu: r-crayon: Update to 1.3.2. 
* gnu/packages/statistics.scm (r-crayon): Update to 1.3.2.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus ad28491e12
gnu: r-knitr: Update to 1.14. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.14.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus 2d037a2d68
gnu: r-mime: Update to 0.5. 
* gnu/packages/statistics.scm (r-mime): Update to 0.5.
 2016-09-12 17:44:44 +02:00
Ricardo Wurmus 5b67bd6e8f
gnu: r-dbi: Update to 0.5-1. 
* gnu/packages/statistics.scm (r-dbi): Update to 0.5-1.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 6d6a917a16
gnu: r-lazyeval: Update to 0.2.0. 
* gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.0.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus bf1e9e4517
gnu: r-stringr: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-stringr): Update to 1.1.0.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 1f94ede8ea
gnu: r-stringi: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.1.1.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus deb265a7b3
gnu: r-plyr: Update to 1.8.4. 
* gnu/packages/statistics.scm (r-plyr): Update to 1.8.4.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 8b2f96e73a
gnu: r-permute: Update to 0.9-4. 
* gnu/packages/statistics.scm (r-permute): Update to 0.9-4.
 2016-09-12 17:44:43 +02:00
Ricardo Wurmus 21f45c9d9e
gnu: r-mgcv: Update to 1.8-14. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-14.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus cb27d6ba4e
gnu: r-rcpp: Update to 0.12.7. 
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.7.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 5aaa12dfb5
gnu: r-digest: Update to 0.6.10. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.10.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 44f711dbe6
gnu: r-biocparallel: Update to 1.6.6. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.6.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 10e479a7c0
gnu: r-genomicranges: Update to 1.24.3. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.24.3.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 01ebbb1b76
gnu: r-limma: Update to 3.28.21. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.28.21.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus bbf53cb527
gnu: r-variantannotation: Update to 1.18.7. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.18.7.
 2016-09-12 17:44:42 +02:00
Ricardo Wurmus 4fa7091d54
gnu: r-genomeinfodb: Update to 1.8.7. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.7.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 3b851cd4ac
gnu: r-seqinr: Update to 3.3-1. 
* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-1.
[propagated-inputs]: Add "r-segmented".
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 3e4c0c6662
gnu: Add r-segmented. 
* gnu/packages/statistics.scm (r-segmented): New variable.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 2b1cc79d98
gnu: r-s4vectors: Update to 0.10.3. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.10.3.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 0b54b4c986
gnu: r-acsnminer: Update to 0.16.8.25. 
* gnu/packages/bioinformatics.scm (r-acsnminer): Update to 0.16.8.25.
 2016-09-12 17:44:41 +02:00
Ricardo Wurmus 2c575bb9a2
gnu: r-vegan: Update to 2.4-1. 
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-1.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus 02a87536bf
gnu: r-curl: Update to 1.2. 
* gnu/packages/web.scm (r-curl): Update to 1.2.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus cc1446acc7
gnu: r-htmlwidgets: Update to 0.7. 
* gnu/packages/web.scm (r-htmlwidgets): Update to 0.7.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus 4df0cb8d05
gnu: r-jsonlite: Update to 1.0. 
* gnu/packages/web.scm (r-jsonlite): Update to 1.0.
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus ccd9b1511e
gnu: r-pracma: Update to 1.9.5. 
* gnu/packages/maths.scm (r-pracma): Update to 1.9.5.
[propagated-inputs]: Add "r-quadprog".
 2016-09-12 17:44:40 +02:00
Ricardo Wurmus 2d047896f9
gnu: Add r-quadprog. 
* gnu/packages/maths.scm (r-quadprog): New variable.
 2016-09-12 17:44:40 +02:00
John Darrington 39fb629535
gnu: (cfitsio, wcslib): Change return values of custom phases. 
* gnu/packages/astronomy.scm (cfitsio, wcslib): Return #t from patch phases.
 2016-09-12 17:35:03 +02:00
Andreas Enge 378920defc
gnu: python-django: Add patch file. 
* gnu/packages/patches/python-django-fix-testcase.patch: New file.

This is a follow-up to commit d18197af78.
 2016-09-12 17:27:33 +02:00
Marius Bakke ac8a642886
gnu: tre: Move to (gnu packages regex). 
* gnu/packages/tre.scm: Remove.  Move 'tre' to...
* gnu/packages/regex.scm (tre): ... here.  New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-09-12 16:38:03 +03:00
ng0 f32ffa04ba
gnu: emacs: Use https for elpa.gnu.org. 
* gnu/packages/emacs.scm: Use 'https' for all elpa.gnu.org URLs.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-09-12 16:38:03 +03:00
Hartmut Goebel b53fc2940f
gnu: Add python-django-simple-math-captcha. 
* gnu/packages/django.scm: (python-django-simple-math-captcha)
(python2-django-simple-math-captcha): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-12 15:27:46 +02:00
Hartmut Goebel d18197af78
gnu: Add python-django. 
* gnu/packages/django.scm: New file.
* gnu/packages/patches/python-django-fix-testcase.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add django.scm.
(dist_patch_DATA): Add python-django-fix-testcase.patch.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-12 15:27:46 +02:00
Efraim Flashner 57dbf577f0
gnu: parallel: Update to 20160822. 
* gnu/packages/parallel.scm (parallel): Update to 20160822.
 2016-09-12 12:59:13 +03:00
Efraim Flashner 44177bc040
gnu: vapoursynth: Update to 33.1. 
* gnu/packages/video.scm (vapoursynth): Update to 33.1.
 2016-09-12 12:30:19 +03:00
ng0 b6337f30cc
gnu: tbb: Update to 2017. 
* gnu/packages/tbb.scm (tbb): Update to 2017.
[license]: Change to ASL2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-12 10:37:39 +03:00
Ludovic Courtès 8d4169a1d1
gnu: Add Impressive. 
* gnu/packages/pdf.scm (impressive): New variable.
 2016-09-12 00:57:46 +02:00
Ludovic Courtès 55fb8d7485
gnu: texinfo: Add 6.3. 
* gnu/packages/texinfo.scm (texinfo-6.3): New variable.
 2016-09-11 23:44:24 +02:00
Leo Famulari ee6bc65f7c
gnu: mpd: Remove unused glib-or-gtk-build-system module. 
* gnu/packages/mpd.scm (define-module): Don't import
'glib-or-gtk-build-system'.
 2016-09-11 14:11:08 -04:00
ng0 aeca1c0ec5
gnu: Add pybitmessage. 
* gnu/packages/messaging.scm (pybitmessage): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-11 20:57:05 +03:00
ng0 29e83e1c70
gnu: messaging: Use license: prefix. 
* gnu/packages/disk.scm (define-module): Import guix licenses with a prefix.
(libotr): Use the license prefix.
(bitlbee): Likewise.
(hexchat): Likewise.
(ngircd): Likewise.
(pidgin): Likewise.
(pidgin-otr): Likewise.
(znc): Likewise.
(python-nbxmpp): Likewise.
(gajim): Likewise.
(prosody): Likewise.
(libtoxcore): Likewise.
(utox): Likewise.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-11 20:55:34 +03:00
ng0 6d8e14d0ba
gnu: Add python2-pyqt-4. 
* gnu/packages/qt.scm (python2-pyqt-4): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-11 20:49:22 +03:00
Leo Famulari 24f2334e36
gnu: libjpeg: Update to 9b. 
* gnu/packages/image.scm (libjpeg): Update to 9b.
 2016-09-11 13:04:52 -04:00
Leo Famulari a2f3c614f4
gnu: libpng: Update to 1.6.25. 
* gnu/packages/image.scm (libpng): Update to 1.6.25.
 2016-09-11 13:04:52 -04:00
Leo Famulari 4d4a6ed775
gnu: zimg: Update to 2.2.1. 
* gnu/packages/image.scm (zimg): Update to 2.2.1.
 2016-09-11 13:04:00 -04:00
Leo Famulari 35eade9cf3
gnu: jbig2dec: Update to 0.13. 
* gnu/packages/image.scm (jbig2dec): Update to 0.13.
[source]: Update URL.
[home-page]: Update URL.
* gnu/packages/patches/jbig2dec-ignore-testtest.patch: Adjust patch.
 2016-09-11 13:04:00 -04:00
Leo Famulari cbe2cc02fb
gnu: jpegoptim: Update to 1.4.4. 
* gnu/packages/image.scm (jpegoptim): Update to 1.4.4.
 2016-09-11 13:04:00 -04:00
David Craven 2932ab9ca4
install: Use login-service. 
* gnu/system/install.scm (installation-services): Use login-service.
 2016-09-11 18:54:13 +02:00
Leo Famulari ce0b822e05
gnu: gnutls: Update to 3.5.4. 
* gnu/packages/tls.scm (gnutls): Update to 3.5.4.
 2016-09-11 11:32:00 -04:00
Leo Famulari 9f20f7f841
gnu: libupnp: Update to 1.6.20. 
* gnu/packages/libupnp.scm (libupnp): Update to 1.6.20.
 2016-09-11 11:31:40 -04:00
Christopher Baines 6c86cef5d3
gnu: Add sonata 
* gnu/packages/mpd.scm (sonata): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-11 11:07:19 -04:00
David Craven 46ec2707a4
services: Add kmscon service. 
* gnu/services/base.scm (<kmscon-configuration>, kmscon-service-type):
  New variables.
* doc/guix.texi (@deffn kmscon-service-type, @deftp
  kmscon-configuration): Add documentation.
 2016-09-11 16:29:45 +02:00
David Craven 317d3b474a
services: Add login-service. 
* gnu/services/base.scm (%default-motd, <login-configuration>,
  login-pam-service, login-serivce-type, login-service): New variables.
  (<mingetty-configuration>, mingetty-shepherd-service,
  mingetty-serivce-type): Remove motd. Remove allow-empty-passwords?.
  Remove mingetty-pam-service.
  (%base-services): Add login-service. Remove motd.
 2016-09-11 16:29:45 +02:00
Clément Lassieur 381000d794
gnu: python-git-review: Wrap it so 'git', 'ssh' and 'scp' are found. 
* gnu/packages/openstack.scm (python-git-review)[arguments]: Add
'wrap-program' phase.
[inputs]: Add openssh.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-11 10:01:18 +03:00
Efraim Flashner 90d8ef6bcb
gnu: gnunet: Use 'modify-phases'. 
* gnu/packages/gnunet.scm (gnunet)[arguments]: Use 'modify-phases'.
 2016-09-11 09:08:10 +03:00
Efraim Flashner b9fe72bf4d
gnu: gnurl: Use 'modify-phases'. 
* gnu/packages/gnunet.scm (gnurl)[arguments]: Use 'modify-phases'.
 2016-09-11 09:06:02 +03:00
ng0 c543b4e1d3
gnu: gnurl: Update to 7.50.2-1. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.50.2-1.
[arguments]: Remove 'delete-failing-test1139 phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-09-11 08:55:19 +03:00
Leo Famulari 5f4d09b52c
gnu: go-1.7: Update to 1.7.1. 
* gnu/packages/golang.scm (go-1.7): Update to 1.7.1.
 2016-09-11 01:23:34 -04:00
Mark H Weaver 7c1fedd0d7
gnu: linux-libre: Update to 4.7.3. 
* gnu/packages/linux.scm (linux-libre): Update to 4.7.3.
 2016-09-10 22:11:21 -04:00
Mark H Weaver 5ed67c812f
gnu: linux-libre@4.4: Update to 4.4.20. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.20.
 2016-09-10 22:11:19 -04:00
Mark H Weaver 4bf184caa4
gnu: linux-libre@4.1: Update to 4.1.32. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.32.
 2016-09-10 22:11:12 -04:00
宋文武 cab1760de2
gnu: icedtea-8: Hardcode dynamically loaded libraries. 
Fixes <https://bugs.gnu.org/24327>.

* gnu/packages/java.scm (icedtea-8)[arguments]: Add 'patch-jni-libs' phase.
 2016-09-11 10:10:11 +08:00
Ben Woodcroft dd4476214c
gnu: python-cachecontrol: Correct parentheses. 
This commit is a follow-up to 'b30565b'.

* gnu/packages/python.scm (python-cachecontrol): Correct parentheses.
 2016-09-11 11:32:45 +10:00
Marius Bakke b30565bd8a
gnu: Add python-cachecontrol. 
* gnu/packages/python.scm (python-cachecontrol, python2-cachecontrol):
  New variables.
 2016-09-11 09:48:54 +10:00
Leo Famulari debf4179b4
gnu: python-pillow: Update to 3.3.1. 
* gnu/packages/python.scm (python-pillow, python2-pillow): Update to 3.3.1.
 2016-09-10 18:37:34 -04:00
Marius Bakke 84be3b9920
gnu: Add mash. 
* gnu/packages/bioinformatics.scm (mash): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-09-10 17:41:38 -04:00
Efraim Flashner 0e790a7ce0
gnu: Add edi. 
* gnu/packages/enlightenment.scm (edi): New variable.
 2016-09-10 22:48:50 +03:00