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5364 Commits

Author SHA1 Message Date
Ricardo Wurmus 346a829a85 gnu: Add HISAT. 
* gnu/packages/bioinformatics.scm (hisat): New variable.
 2015-02-10 14:37:13 +01:00
Taylan Ulrich Bayırlı/Kammer 4ee696247b gnu: Add openntpd. 
* gnu/packages/ntp.scm (openntpd): New variable.
 2015-02-10 10:50:57 +01:00
Taylan Ulrich Bayırlı/Kammer d02f2cc48c gnu: Add smartmontools. 
* gnu/packages/admin.scm (smartmontools): New variable.
 2015-02-10 09:28:48 +01:00
Cyril Roelandt c9815b5deb lint: handle FTP URIs. 
* guix/scripts/lint.scm (probe-uri): handle FTP URIs.
 2015-02-10 00:24:30 +01:00
Taylan Ulrich Bayırlı/Kammer e1e277372a gnu: Add ltrace. 
* gnu/packages/linux.scm (ltrace): New variable.
 2015-02-10 00:00:12 +01:00
Jason Self 1f4edec4fd gnu: linux-libre: Update to 3.19 
* gnu/packages/linux.scm (linux-libre): Update to version 3.19.
 2015-02-09 14:46:04 -08:00
Ludovic Courtès 34875383c1 linux-initrd: Add 'isci' module, needed for some SAS controllers. 
Encountered on a Dell Precision T3600.

* gnu/system/linux-initrd.scm (base-initrd)[linux-modules]: Add isci.
 2015-02-09 18:18:41 +01:00
Ludovic Courtès 3bea13bb1f profiles: Report "pseudo-upgrades" as upgrades, not downgrades. 
Reported by Andreas Enge <andreas@enge.fr>
at <http://debbugs.gnu.org/cgi/bugreport.cgi?bug=19764#19>.

* guix/profiles.scm (manifest-transaction-effects): Use 'version>=?'
  instead of 'version>?'.
* tests/profiles.scm ("manifest-transaction-effects and
  pseudo-upgrades"): New test.
 2015-02-09 18:18:41 +01:00
Ludovic Courtès cde1e967cf utils: Add 'version>=?'. 
* guix/utils.scm (version>?): Clarify docstring.
  (version>=?): New procedure.
 2015-02-09 18:18:41 +01:00
Federico Beffa d4f12db8c0 gnu: ffmpeg: Add 'lame' input. 
* gnu/packages/video.scm (ffmpeg): Add 'lame' input and corresponding
  configure flag.
 2015-02-09 16:13:23 +01:00
Andreas Enge fc2bf70dfe gnu: perl-net-ssleay: Update to 1.68. 
* gnu/packages/openssl.scm (perl-net-ssleay): Update to 1.68.
 2015-02-09 14:29:39 +01:00
Andreas Enge c7ab5a12f4 gnu: openssl: Update to 1.0.2. 
* gnu/packages/openssl.scm (openssl): Update to 1.0.2.
 2015-02-09 13:43:06 +01:00
Ricardo Wurmus ad320b20ee gnu: Add Sphinx RTD theme. 
* gnu/packages/python.scm (python-sphinx-rtd-theme, python2-sphinx-rtd-theme):
  New variables.
 2015-02-09 10:29:55 +01:00
Ricardo Wurmus d7678942f9 gnu: Add flexbar. 
* gnu/packages/bioinformatics.scm (flexbar): New variable.
 2015-02-09 10:26:28 +01:00
Ricardo Wurmus d3517eda25 gnu: Add seqan. 
* gnu/packages/bioinformatics.scm (seqan): New variable.
 2015-02-09 10:26:20 +01:00
Taylan Ulrich Bayırlı/Kammer da6c3749e4 gnu: Add libcap-ng. 
* gnu/packages/admin.scm (libcap-ng): New variable.
 2015-02-09 09:59:47 +01:00
Ricardo Wurmus d55f912a31 gnu: Add aubio. 
* gnu/packages/audio.scm (aubio): New variable.
 2015-02-09 09:21:36 +01:00
Ricardo Wurmus f47cba0efb gnu: Add liblo. 
* gnu/packages/audio.scm (liblo): New variable.
 2015-02-09 09:14:12 +01:00
Ricardo Wurmus c54a89811f gnu: Add JACK2. 
* gnu/packages/audio.scm (jack-2): New variable.
 2015-02-09 09:00:02 +01:00
David Thompson 2cd85cf9e1 gnu: Add srt2vtt. 
* gnu/packages/video.scm (srt2vtt): New variable.
 2015-02-08 21:08:06 -05:00
nebuli 5833bf33a2 services: lsh: Add graceful handling of daemonic option. 
* gnu/services/ssh.scm (lsh-service): New #:keys (daemonic?, pid-file?,
  pid-file).  Build new lshd-command and expand service-requirement
  field.
* doc/guix.texi (Networking Services): Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2015-02-08 21:52:26 +01:00
Ricardo Wurmus a677c7267b build: Add 'waf-build-system'. 
* guix/build-system/waf.scm,
  guix/build/waf-build-system.scm: New files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document waf-build-system.
 2015-02-08 19:21:58 +01:00
Ludovic Courtès 027981d6d7 doc: Remove ".ko" extension in 'base-initrd' example. 
Reported by Marek Benc.

* doc/guix.texi (Initial RAM Disk): Remove ".ko" from the 'base-initrd'
  example.  Add a comment.
 2015-02-08 19:00:39 +01:00
Ludovic Courtès 46b23e1a43 profiles: Distinguish downgrades from upgrades. 
Fixes <http://bugs.gnu.org/19764>.

* guix/profiles.scm (manifest-transaction-effects): Return downgraded
  packages as a fourth value.
* guix/ui.scm (show-manifest-transaction): Adjust accordingly.
* tests/profiles.scm ("manifest-transaction-effects and downgrades"):
  New test.
 2015-02-08 19:00:39 +01:00
Ludovic Courtès 77ee4a96f4 ui: Simplify 'show-manifest-transaction' test. 
* tests/ui.scm ("show-manifest-transaction"): Remove useless call to
  'manifest-transaction-effects'.
 2015-02-08 19:00:39 +01:00
Ludovic Courtès b7071bc5bb ui: Properly report '&nar-error' conditions. 
This is a followup to 46b8aad.

* guix/ui.scm (call-with-error-handling): Add 'nar-error?' case.
 2015-02-08 19:00:39 +01:00
Ludovic Courtès 0919f5f466 build: Remove references to 'nix-setuid-helper'. 
'nix-setuid-helper' vanished in commit d43eb499a (Jan. 2014.)

* pre-inst-env.in: Remove occurrences of 'NIX_SETUID_HELPER'.
 2015-02-08 19:00:39 +01:00
Ludovic Courtès 843b196287 gnu: guile-ssh: Correct post-installation test. 
* gnu/packages/ssh.scm (guile-ssh)[arguments]
  <fix-libguile-ssh-file-name>: Call 'zero?' to check the return value of
  'system*'.
 2015-02-08 19:00:39 +01:00
Andreas Enge 27e86bed53 gnu: Add p11-kit. 
* gnu/packages/gnutls.scm (p11-kit): New variable.
 2015-02-08 16:23:44 +01:00
Andreas Enge 75be6b7c06 gnu: Add libmtp. 
* gnu/packages/libusb.scm (libmtp): New variable.
 2015-02-08 14:36:55 +01:00
David Thompson 5294768ce3 gnu: tidy: Run bootstrap phase after the unpack phase. 
* gnu/packages/web.scm (tidy): Run bootstrap phase after the unpack phase,
  rather than before the configure phase.
 2015-02-07 21:12:21 -05:00
Jason Self 59c4cceea8 gnu: linux-libre: Update to 3.18.6 
* gnu/packages/linux.scm (linux-libre): Update to version 3.18.6.
 2015-02-07 16:21:04 -08:00
David Thompson 18cb3df837 gnu: Add tidy. 
* gnu/packages/web.scm (tidy): New variable.
 2015-02-07 18:48:53 -05:00
Ludovic Courtès 0cb804117f gnu: lightning: Update to 2.1.0. 
* gnu/packages/lightning.scm (lightning): Update to 2.1.0.
 2015-02-07 23:30:05 +01:00
Ludovic Courtès cce629c027 Thank Andrei. 2015-02-07 23:17:33 +01:00
Ludovic Courtès 9ba0b8d3d0 daemon: Flush upon '\r' when reading the substituter's stderr. 
* nix/libstore/local-store.cc (LocalStore::getLineFromSubstituter):
  Flush when the line contains '\r'.
 2015-02-07 23:16:56 +01:00
Ludovic Courtès 46b8aadbd6 serialization: Check for EOF and incomplete input conditions. 
Fixes <http://bugs.gnu.org/19756>.
Reported by <sleep_walker@suse.cz>.

* guix/serialization.scm (currently-restored-file): New variable.
  (get-bytevector-n*): New procedure.
  (read-int, read-long-long, read-string, read-latin1-string,
  read-contents): Use it instead of 'get-bytevector-n'.
  (restore-file): Parameterize 'currently-restored-file' and set it.
* tests/nar.scm ("restore-file with incomplete input"): New test.
 2015-02-07 23:16:55 +01:00
Ludovic Courtès cbc538fe69 doc: Document the location of the build directory. 
Fixes <http://bugs.gnu.org/19771>.
Reported by Andrei Osipov <andrspv@gmail.com>.

* doc/guix.texi (Invoking guix-daemon): Document the build directory
  location.
 2015-02-07 23:16:55 +01:00
Ludovic Courtès 4320c094f3 gnu: gimp: Add EXIF and SVG support, plus color management. 
* gnu/packages/gimp.scm (gimp)[inputs]: Add LIBEXIF, LCMS, and LIBRSVG.
 2015-02-07 23:16:55 +01:00
Andreas Enge 5cc0e48613 gnu: podofo: Add optional input lua. 
* gnu/packages/pdf.scm (podofo): Add optional input lua-5.1.
 2015-02-07 20:59:37 +01:00
Andreas Enge d4322e6111 gnu: podofo: Update to 0.9.3. 
* gnu/packages/pdf.scm (podofo): Update to 0.9.3.
 2015-02-07 20:50:35 +01:00
Andreas Enge cb6a14ba56 gnu: podofo: Enable building a shared library. 
* gnu/packages/pdf.scm (podofo): Enable building a shared library in addition
    to a static one.
 2015-02-07 20:42:19 +01:00
Andreas Enge 71e1de33f9 gnu: chmlib: Correct license. 
* gnu/packages/ebook.scm (chmlib): Correct copy-pasted license field.
 2015-02-07 20:16:30 +01:00
Andreas Enge 947ae54559 gnu: Add chmlib. 
* gnu/packages/ebook.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2015-02-07 20:12:36 +01:00
Andreas Enge 85b5d3331d gnu: dejagnu: Update to 1.5.2. 
* gnu/packages/dejagnu.scm (dejagnu): Update to 1.5.2.
 2015-02-07 19:53:23 +01:00
Andreas Enge 7908f58343 gnu: global: Update to 6.3.4. 
* gnu/packages/global.scm (global): Update to 6.3.4.
 2015-02-07 19:41:33 +01:00
Andreas Enge 9b268f12fe gnu: eigen: Update to 3.2.4. 
* gnu/packages/algebra.scm (eigen): Update to 3.2.4.
 2015-02-07 19:25:47 +01:00
Andreas Enge 717ccec86b gnu: imagemagick: Update to 6.9.0-4. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.0-4.
 2015-02-07 18:05:32 +01:00
Mark H Weaver 710f3ce44f gnu: tumbler: Update to 0.1.30. 
* gnu/packages/xfce.scm (tumbler): Update to 0.1.30.  Use latest gstreamer.
 2015-02-07 01:59:55 -05:00
Mark H Weaver 7747c4ca3d gnu: wicd: Fix curses client to work with urwid 1.3. 
* gnu/packages/patches/wicd-urwid-1.3.patch: New file.
* gnu-system (dist_patch_DATA): Add it.
* gnu/packages/wicd.scm (wicd): Add patch.
 2015-02-06 15:26:56 -05:00