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Author SHA1 Message Date
Maxim Cournoyer 08b4a10fa6
services: ntp: Allow large adjustment by default. 
This is documented as best practice in `man ntpd', and is required to allow
the date to be set correctly when traveling (without having to manually update
the hardware clock in the BIOS/UEFI).

* gnu/services/networking.scm (<ntp-server>)[allow-large-adjustment?]: Set the
default value to #t.
* doc/guix.texi (Networking Services): Update documentation.
 2019-09-08 23:15:29 +09:00
L p R n d n 3426c0e531
gnu: thunar-volman: Update to 0.9.5. 
* gnu/packages/xfce.scm (thunar-volman): Update to 0.9.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-08 14:43:41 +02:00
L p R n d n 2bb2971883
gnu: tumbler: Remove unused gstreamer. 
* gnu/packages/xfce.scm (tumbler)[inputs]: Remove gstreamer.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-08 14:43:41 +02:00
L p R n d n 2a6f5190cf
gnu: tumbler: Fix pdf thumbnailer. 
* gnu/packages/xfce.scm (tumbler)[inputs]: Add cairo.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-08 14:43:41 +02:00
Ludovic Courtès befac35876
gnu: libraft: Fetch source from Git. 
* gnu/packages/cluster.scm (libraft)[source]: Switch to GIT-FETCH.
 2019-09-08 14:43:41 +02:00
Andrew Miloradovsky 45151bcb94
gnu: Add libraft 
* gnu/packages/cluster.scm (libraft): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-08 14:43:41 +02:00
Ludovic Courtès 74781c65f3
gnu: guix: Update to cc98b00. 
* gnu/packages/package-management.scm (guix): Update to cc98b00.
(guix-daemon)[arguments]: Remove 'install' phase; add
'change-default-guix' phase.
 2019-09-08 14:43:41 +02:00
Efraim Flashner 28ac73358f
gnu: micropython: Update to 1.11. 
* gnu/packages/python.scm (micropython): Update to 1.11.
 2019-09-08 14:43:15 +03:00
Efraim Flashner 78249ebf5b
gnu: wget2: Update to 1.99.2. 
* gnu/packages/wget.scm (wget2): Update to 1.99.2.
[source]: Download from gnu mirrors.
[arguments]: Remove custom 'bootstrap phase, update custom
'skip-network-tests phase. Don't build static library.
[inputs]: Add bzip2, gpgme, zlib.
[native-inputs]: Remove autoconf, automake, flex, gettext-minimal,
libtool, python-2.
 2019-09-08 13:53:26 +03:00
Efraim Flashner 7fb742215c
gnu: wget.scm: Use license: prefix. 
* gnu/packages/wget.scm (wget, wgetpaste, wget2)[license]: Use
'license:' prefix.
 2019-09-08 13:53:26 +03:00
raingloom 7fcc2f9355
gnu: Add fmit. 
* gnu/packages/music.scm (fmit): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2019-09-08 11:08:46 +02:00
Efraim Flashner 799d8d3ca6
gnu: haskell-xyz.scm: Correctly hide packages. 
* gnu/packages/haskell-xyz.scm (ghc-attoparsec-bootstrap,
ghc-integer-logarithms-bootstrap, ghc-scientific-bootstrap,
ghc-semigroups-bootstrap, ghc-unordered-containers-bootstrap,
ghc-wcwidth-bootstrap)[properties]: Fix typo, make 'hidden?' a tuple.
 2019-09-08 11:18:39 +03:00
Ricardo Wurmus e0819e5ca2
gnu: Add emacs-tao-theme. 
* gnu/packages/emacs-xyz.scm (emacs-tao-theme): New variable.
 2019-09-08 09:27:26 +02:00
Vagrant Cascadian bc5aa38667
gnu: Add odt2txt. 
* gnu/packages/textutils (odt2txt): New variable.
* gnu/packages/package-management (diffoscope)[native-inputs]: Add odt2txt.
  [use-modules]: Remove accidentally added libreoffice package module.
 2019-09-08 00:21:21 -07:00
Vagrant Cascadian d54ca1cd4d
gnu: Add sng. 
* gnu/packages/images (sng): New variable.
* gnu/packages/package-management (diffoscope)[native-inputs]: Add sng.
 2019-09-07 23:44:04 -07:00
Vagrant Cascadian 68fea604b0
gnu: Add pngsuite. 
* gnu/packages/image (pngsuite): New variable.
 2019-09-07 23:44:01 -07:00
Vagrant Cascadian 37ecf2d905
gnu: diffoscope: Enable even more tests. 
* gnu/packages/package-management (diffoscope)[native-inputs]: Add additional
  dependencies for tests.
  [use-module]: Add corresponding package modules.
 2019-09-07 20:28:48 -07:00
Vagrant Cascadian 3dd20da0cb
gnu: diffoscope: Enable additional tests. 
* gnu/packages/package-management (diffoscope) [native-inputs]: Add additional
  packages used for tests.
 2019-09-07 20:28:35 -07:00
Vagrant Cascadian 3ec8c0ca94
gnu: diffoscope: Update to 123. 
* gnu/packages/package-management (diffoscope): Update to 123.
  [arguments]: Update phase writable-test-data to include tests directory.
    Add phase remove-ocaml-test.
 2019-09-07 20:28:18 -07:00
Vagrant Cascadian 9f74bd317f
gnu: python-debian: Update to 0.1.36. 
* gnu/packages/python-xyz (python-debian): Update to 0.1.36.
  [source]: Switch to using git-fetch.
  [arguments]: Add phase to delete tests depending on tools not yet present in
  guix.
  [propagated-inputs]: Add python-chardet.
 2019-09-07 20:27:34 -07:00
Ricardo Wurmus f791b1eecc
gnu: r-rsubread: Update to 1.34.7. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.7.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus a39222d7e2
gnu: r-regioner: Update to 1.16.3. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.3.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus d40ebbf228
gnu: r-gprofiler: Update to 0.6.8. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.8.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus 8e70b33c56
gnu: r-annotationhub: Update to 2.16.1. 
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.1.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus f70599cb78
gnu: r-edger: Update to 3.26.8. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.8.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus 801dc98f1f
gnu: r-ggraph: Update to 2.0.0. 
* gnu/packages/cran.scm (r-ggraph): Update to 2.0.0.
[propagated-inputs]: Add r-graphlayouts, r-rlang, and r-tidygraph; remove
r-plyr.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus 995a20e892
gnu: r-msigdbr: Update to 7.0.1. 
* gnu/packages/cran.scm (r-msigdbr): Update to 7.0.1.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus f396d343b7
gnu: r-ggeffects: Update to 0.12.0. 
* gnu/packages/cran.scm (r-ggeffects): Update to 0.12.0.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus 9a4706828c
gnu: r-ggformula: Update to 0.9.2. 
* gnu/packages/cran.scm (r-ggformula): Update to 0.9.2.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus c90eebf791
gnu: r-insight: Update to 0.5.0. 
* gnu/packages/cran.scm (r-insight): Update to 0.5.0.
 2019-09-08 00:30:33 +02:00
Ricardo Wurmus f11920c759
gnu: r-ggpubr: Update to 0.2.3. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.3.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 9960ad55be
gnu: r-geometry: Update to 0.4.4. 
* gnu/packages/cran.scm (r-geometry): Update to 0.4.4.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 02efab6917
gnu: r-feather: Update to 0.3.4. 
* gnu/packages/cran.scm (r-feather): Update to 0.3.4.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 5e7c6e54c8
gnu: r-matrixstats: Update to 0.55.0. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.55.0.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus de162a1509
gnu: r-rcpparmadillo: Update to 0.9.700.2.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.700.2.0.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 2b705168e9
gnu: r-devtools: Update to 2.2.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 2.2.0.
[propagated-inputs]: Add r-covr, r-crayon, r-desc, r-dt, r-ellipsis, r-glue,
and r-rversions.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus e5cf3722c6
gnu: r-gdtools: Update to 0.2.0. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.2.0.
[inputs]: Add freetype.
[propagated-inputs]: Add r-systemfonts; remove r-withr.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 9567bd8dd9
gnu: Add r-tidygraph. 
* gnu/packages/cran.scm (r-tidygraph): New variable.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 9390300915
gnu: Add r-graphlayouts. 
* gnu/packages/cran.scm (r-graphlayouts): New variable.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 6983178b06
gnu: Add r-systemfonts. 
* gnu/packages/cran.scm (r-systemfonts): New variable.
 2019-09-08 00:30:32 +02:00
Ricardo Wurmus 7a5ed348c0
gnu: Add r-covr. 
* gnu/packages/cran.scm (r-covr): New variable.
 2019-09-08 00:30:32 +02:00
Arun Isaac 9d280ef2a8
gnu: poussetaches: Update to 0.0.2. 
* gnu/packages/web.scm (poussetaches): Update to 0.0.2.
 2019-09-08 00:02:59 +05:30
Julien Lepiller e877f4d012
gnu: nml: Fix for newer pillow version. 
* gnu/packages/game-development.scm (nml)[arguments]: Add a phase to fix
for newer pillow.
 2019-09-07 20:14:50 +02:00
Kei Kebreau c3a7dae831
gnu: qtermwidget: Enable UTF-8 support. 
* gnu/packages/lxqt.scm (qtermwidget)[inputs]: Add utf8proc.
 2019-09-07 09:17:34 -04:00
Rutger Helling 08b3521000
gnu: wireguard: Update to 0.0.20190905. 
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190905.
 2019-09-07 11:16:24 +02:00
Mark H Weaver f66aee3d0d
gnu: linux-libre: Update to 5.2.13. 
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.13.
(linux-libre-5.2-pristine-source): Update hash.
 2019-09-06 20:42:05 -04:00
Mark H Weaver a6ec7eba26
gnu: linux-libre@4.14: Update to 4.19.71. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.71.
(linux-libre-4.19-pristine-source): Update hash.
 2019-09-06 20:41:23 -04:00
Mark H Weaver d45f5c40a2
gnu: linux-libre@4.14: Update to 4.14.142. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.142.
(linux-libre-4.14-pristine-source): Update hash.
 2019-09-06 20:40:18 -04:00
Mark H Weaver 67ad69b768
gnu: linux-libre@4.9: Update to 4.9.191. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.191.
(linux-libre-4.9-pristine-source): Update hash.
 2019-09-06 20:39:13 -04:00
Mark H Weaver be0fb599e7
gnu: linux-libre@4.4: Update to 4.4.191. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.191.
(linux-libre-4.4-pristine-source): Update hash.
 2019-09-06 20:38:06 -04:00
Mark H Weaver 3fe53f49a7
Revert "services: Add ‘/usr/bin/env’ special file." 
This reverts commit 3b38bf141a.

The Guix project discussed this years ago and decided against including
/usr/bin/env.  That decision should not be reversed without a wider
discussion.
 2019-09-06 19:35:08 -04:00
Ricardo Wurmus a35f153d54
gnu: python-scipy: Update to 1.3.1. 
* gnu/packages/python-xyz.scm (python-scipy): Update to 1.3.1.
(python2-scipy): Keep at version 1.2.2.
 2019-09-07 00:48:12 +02:00
L p R n d n 8cc5d3dc4d
gnu: xfce4-panel: Fix tzdata path. 
* gnu/packages/xfce.scm (xfce4-panel)[inputs]: Add tzdata.
[arguments] Add Fix-tzdata-path phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-07 00:36:34 +02:00
L p R n d n 64200f0197
gnu: libxfce4ui: Add vendor. 
* gnu/packages/xfce.scm (libxfce4ui)[arguments]: Add #:configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-07 00:36:34 +02:00
L p R n d n 48af935672
gnu: libxfce4ui: Add gobject-introspection support. 
* gnu/packages/xfce.scm (libxfce4ui): Add gobject-introspection to native-inputs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-07 00:36:34 +02:00
L p R n d n 279b5730d4
gnu: xfconf: Fix tests. 
* gnu/packages/xfce.scm (xfconf)[arguments]: Rename check phase to
  custom-check.
  [native-inputs]: Add dbus.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-07 00:36:34 +02:00
L p R n d n dbfd5a1380
gnu: xfconf: Add vala support. 
* gnu/packages/xfce.scm (xfconf): Add vala to native-inputs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-07 00:36:34 +02:00
L p R n d n 2c10c4182c
gnu: xfconf: Add support for gobject-introspection. 
* gnu/packages/xfce.scm (xfconf): Add gobject-introspection to native-inputs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-07 00:36:34 +02:00
Ludovic Courtès 4961364f16
gnu: qtwebkit: Disable non-x86 builds. 
* gnu/packages/qt.scm (qtwebkit)[supported-systems]: New field.
 2019-09-07 00:36:34 +02:00
Ludovic Courtès 61acb764ed
gnu: ecl-net.didierverna.asdf-flv: Fix variable name. 
Fixes a typo in 0403d01f01.

* gnu/packages/lisp.scm (ecl-net.didierverna.asdf-flv): New name of the
second occurrence of 'ecl-alexandria'.
 2019-09-07 00:36:34 +02:00
Ricardo Wurmus 7fc41e6e66
gnu: Add emacs-poet-theme. 
* gnu/packages/emacs-xyz.scm (emacs-poet-theme): New variable.
 2019-09-06 23:29:34 +02:00
Tobias Geerinckx-Rice ccbd1648f4
gnu: exim: Update to 4.92.2 [fixes CVE-2019-15846]. 
* gnu/packages/mail.scm (exim): Update to 4.92.2.
 2019-09-06 17:36:04 +02:00
Efraim Flashner cae5312758
gnu: crates-io.scm: Fix several home-pages. 
* gnu/packages/crates-io.scm (rust-constant-time-eq, rust-fixedbitset,
rust-futures, rust-pico-sys, rust-pkg-config, rust-quick-error,
rust-remove-dir-all, rust-spin, rust-tempdir, rust-traitobject,
rust-void)[home-page]: Update to correct home-page.
 2019-09-06 17:25:03 +03:00
Ricardo Wurmus 8205534569
gnu: Add samblaster. 
* gnu/packages/bioinformatics.scm (samblaster): New variable.
 2019-09-06 15:00:49 +02:00
Ricardo Wurmus 7cd446fd3f
gnu: Add r-txdb-celegans-ucsc-ce6-ensgene. 
* gnu/packages/bioconductor.scm (r-txdb-celegans-ucsc-ce6-ensgene): New
variable.
 2019-09-06 15:00:49 +02:00
Efraim Flashner 41ba4cf150
gnu: Add rust-parity-wasm. 
* gnu/packages/crates-io.scm (rust-parity-wasm): New variable.
 2019-09-06 15:46:04 +03:00
Efraim Flashner 540d830edc
gnu: Add rust-time. 
* gnu/packages/crates-io.scm (rust-time): New variable.
 2019-09-06 15:46:03 +03:00
Efraim Flashner 4282cbe9b0
gnu: Add rust-semver-parser-0.7. 
* gnu/packages/crates-io.scm (rust-semver-parser-0.7): New variable.
 2019-09-06 15:46:03 +03:00
Efraim Flashner 516b2f1a3b
gnu: Add rust-getopts. 
* gnu/packages/crates-io.scm (rust-getopts): New variable.
 2019-09-06 15:46:03 +03:00
Efraim Flashner 9a5ee9928a
gnu: Add rust-clang-sys. 
* gnu/packages/crates-io.scm (rust-clang-sys): New variable.
 2019-09-06 15:46:03 +03:00
Efraim Flashner cef7de6fa6
gnu: Add rust-glob-0.2. 
* gnu/packages/crates-io.scm (rust-glob-0.2): New variable.
 2019-09-06 15:46:03 +03:00
Efraim Flashner b79eab74a1
gnu: Add rust-glob. 
* gnu/packages/crates-io.scm (rust-glob): New variable.
 2019-09-06 15:46:03 +03:00
Efraim Flashner 01519b3d9f
gnu: Add rust-sourcefile. 
* gnu/packages/crates-io.scm (rust-sourcefile): New variable.
 2019-09-06 15:46:02 +03:00
Efraim Flashner 61322df019
gnu: Add rust-miow-0.2. 
* gnu/packages/crates-io.scm (rust-miow-0.2): New variable.
 2019-09-06 15:46:02 +03:00
Efraim Flashner 5ae8c1fba3
gnu: Add rust-miow. 
* gnu/packages/crates-io.scm (rust-miow): New variable.
 2019-09-06 15:46:02 +03:00
Efraim Flashner 1241007f16
gnu: Add rust-ansi-term. 
* gnu/packages/crates-io.scm (rust-ansi-term): New variable.
 2019-09-06 15:46:02 +03:00
Efraim Flashner fbf37a7bff
gnu: Add rust-socket2. 
* gnu/packages/crates-io.scm (rust-socket2): New variable.
 2019-09-06 15:46:02 +03:00
Efraim Flashner 3494be3515
gnu: Add rust-tar. 
* gnu/packages/crates-io.scm (rust-tar): New variable.
 2019-09-06 15:46:01 +03:00
Efraim Flashner 27438eb817
gnu: Add rust-filetime. 
* gnu/packages/crates-io.scm (rust-filetime): New variable.
 2019-09-06 15:46:01 +03:00
Efraim Flashner 1a9ce2a252
gnu: Add rust-xattr. 
* gnu/packages/crates-io.scm (rust-xattr): New variable.
 2019-09-06 15:46:01 +03:00
Efraim Flashner 5ef6549e12
gnu: Add rust-tempfile. 
* gnu/packages/crates-io.scm (rust-tempfile): New variable.
 2019-09-06 15:46:01 +03:00
Efraim Flashner 1515ecae21
gnu: Add rust-lzma-sys. 
* gnu/packages/crates-io.scm (rust-lzma-sys): New variable.
 2019-09-06 15:46:01 +03:00
Efraim Flashner f32a4ba746
gnu: Add rust-jemalloc-sys. 
* gnu/packages/crates-io.scm (rust-jemalloc-sys): New variable.
 2019-09-06 15:46:01 +03:00
Efraim Flashner c891c7f174
gnu: Add rust-cargon. 
* gnu/packages/crates-io.scm (rust-cargon): New variable.
 2019-09-06 15:46:00 +03:00
Efraim Flashner f007411308
gnu: Add rust-rustc-demangle. 
* gnu/packages/crates-io.scm (rust-rustc-demangle): New variable.
 2019-09-06 15:46:00 +03:00
Efraim Flashner eda57f4834
gnu: Add rust-pico-sys. 
* gnu/packages/crates-io.scm (rust-pico-sys): New variable.
 2019-09-06 15:46:00 +03:00
Efraim Flashner 02f66e9022
gnu: Add rust-gcc. 
* gnu/packages/crates-io.scm (rust-gcc): New variable.
 2019-09-06 15:46:00 +03:00
Efraim Flashner f51c47b528
gnu: Add rust-openssl-probe. 
* gnu/packages/crates-io.scm (rust-openssl-probe): New variable.
 2019-09-06 15:46:00 +03:00
Efraim Flashner 5b15d635ed
gnu: Add rust-netlib-src. 
* gnu/packages/crates-io.scm (rust-netlib-src): New variable.
 2019-09-06 15:45:59 +03:00
Efraim Flashner e81e48ef29
gnu: Add rust-miniz-sys. 
* gnu/packages/crates-io.scm (rust-miniz-sys): New variable.
 2019-09-06 15:45:59 +03:00
Efraim Flashner 3a3c72e6b1
gnu: Add rust-miniz-oxide. 
* gnu/packages/crates-io.scm (rust-miniz-oxide): New variable.
 2019-09-06 15:45:59 +03:00
Efraim Flashner 94c715e613
gnu: Add rust-memmap-0.6. 
* gnu/packages/crates-io.scm (rust-memmap@0.6): New variable.
 2019-09-06 15:45:59 +03:00
Efraim Flashner 701eaebc66
gnu: Add rust-memmap. 
* gnu/packages/crates-io.scm (rust-memmap): New variable.
 2019-09-06 15:45:59 +03:00
Efraim Flashner aeaa601260
gnu: Add rust-vcpkg. 
* gnu/packages/crates-io.scm (rust-vcpkg): New variable.
 2019-09-06 15:45:59 +03:00
Efraim Flashner 6f5cd37a60
gnu: Add rust-libloading. 
* gnu/packages/crates-io.scm (rust-libloading): New variable.
 2019-09-06 15:45:58 +03:00
Efraim Flashner 412c43b423
gnu: Add rust-compiler-builtins. 
* gnu/packages/crates-io.scm (rust-compiler-builtins): New hidden variable.
 2019-09-06 15:45:58 +03:00
Efraim Flashner e78973f45b
gnu: Add rust-stacker. 
* gnu/packages/crates-io.scm (rust-stacker): New variable.
 2019-09-06 15:45:58 +03:00
Efraim Flashner 2446b451e2
gnu: Add rust-cmake. 
* gnu/packages/crates-io.scm (rust-cmake): New variable.
 2019-09-06 15:45:58 +03:00
Efraim Flashner 5bd7965e11
gnu: Add rust-cc. 
* gnu/packages/crates-io.scm (rust-cc): New variable.
 2019-09-06 15:45:58 +03:00
Efraim Flashner 313778655e
gnu: Add rust-log. 
* gnu/packages/crates-io.scm (rust-log): New variable.
 2019-09-06 15:45:58 +03:00