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338 Commits

Author SHA1 Message Date
zimoun a0efa069a1
gnu: Add r-depecher. 
* gnu/packages/bioconductor.scm (r-depecher): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
zimoun 1adb9cbc5e
gnu: Add r-mixomics. 
* gnu/packages/bioconductor.scm (r-mixomics): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
zimoun 1502751b32
gnu: Add r-flowsom. 
* gnu/packages/bioconductor.scm (r-flowsom): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
zimoun e0cb053edb
gnu: Add r-flowmeans. 
* gnu/packages/bioconductor.scm (r-flowmeans): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
zimoun ed6f49fc41
gnu: Add r-consensusclusterplus. 
* gnu/packages/bioconductor.scm (r-consensusclusterplus): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
zimoun a0422d18f1
gnu: Add r-flowutils. 
* gnu/packages/bioconductor.scm (r-flowutils): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
zimoun a6fedf1f37
gnu: Add r-flowcore. 
* gnu/packages/bioconductor.scm (r-flowcore): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
zimoun ad8f46c69e
gnu: Add r-all. 
* gnu/packages/bioconductor.scm (r-all): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-07-24 23:05:39 +02:00
Tobias Geerinckx-Rice 61242625ad
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.4.7. 
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Update to 3.4.7.
 2019-07-08 15:33:35 +02:00
Ricardo Wurmus 3e265d968b
gnu: r-rsubread: Update to 1.34.4. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.4.
 2019-06-29 01:34:42 +02:00
Ricardo Wurmus 3c944fdace
gnu: r-genomicscores: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.8.1.
 2019-06-29 01:34:42 +02:00
Ricardo Wurmus aff3ecbfda
gnu: r-dose: Update to 3.10.2. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.2.
 2019-06-29 01:34:42 +02:00
Ricardo Wurmus 2cb738a6ad
gnu: Add r-rsubread. 
* gnu/packages/bioconductor.scm (r-rsubread): New variable.
 2019-06-26 15:52:10 +02:00
Ricardo Wurmus 932a6c422a
gnu: r-rhisat2: Update to 1.0.3. 
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.3.
 2019-06-17 04:55:12 +02:00
Ricardo Wurmus 798b80cea2
gnu: Add r-txdb-hsapiens-ucsc-hg38-knowngene. 
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg38-knowngene): New variable.
 2019-06-12 16:23:44 +02:00
Ricardo Wurmus ae6fa185af
gnu: Add r-annotatr. 
* gnu/packages/bioconductor.scm (r-annotatr): New variable.
 2019-06-12 11:07:37 +02:00
Ricardo Wurmus 075a90946b
gnu: Add r-biosigner. 
* gnu/packages/bioconductor.scm (r-biosigner): New variable.
 2019-06-10 13:41:48 +02:00
Ricardo Wurmus a9fac3f4d3
gnu: Add r-ropls. 
* gnu/packages/bioconductor.scm (r-ropls): New variable.
 2019-06-10 13:41:45 +02:00
Ricardo Wurmus 2d1d59ab57
gnu: r-rhisat2: Update to 1.0.2. 
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.2.
 2019-06-09 15:19:58 +02:00
Ricardo Wurmus 61730c3db4
gnu: r-aucell: Update to 1.6.1. 
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.6.1.
 2019-06-09 15:19:58 +02:00
Ricardo Wurmus 1a24f855c8
gnu: Add r-birta. 
* gnu/packages/bioconductor.scm (r-birta): New variable.
 2019-05-31 14:40:29 +02:00
Ricardo Wurmus 81e3de01ae
gnu: Add r-birewire. 
* gnu/packages/bioconductor.scm (r-birewire): New variable.
 2019-05-31 14:40:20 +02:00
Ricardo Wurmus d1ee1540d4
gnu: r-dose: Update to 3.10.1. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.1.
 2019-05-30 13:40:48 +02:00
Ricardo Wurmus e4519ee73d
gnu: r-atacseqqc: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.1.
 2019-05-28 23:56:36 +02:00
Ricardo Wurmus 13b49976b7
gnu: r-icobra: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.1.
 2019-05-28 23:56:31 +02:00
Ricardo Wurmus 85d0bd5340
gnu: r-chippeakanno: Update to 3.18.1. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.1.
 2019-05-28 23:56:27 +02:00
Vagrant Cascadian 337bdc17ce
gnu: r-widgettools: Fix typo "This package". 
* gnu/packages/bioconductor (r-widgettools)[description]: Fix typo.
 2019-05-22 18:07:55 -07:00
Vagrant Cascadian 02fe0976b6
gnu: r-interactionset: Fix typo "This package". 
* gnu/packages/bioconductor (r-interactionset)[description]: Fix typo.
 2019-05-22 18:07:53 -07:00
Vagrant Cascadian 4f66400493
gnu: r-anota: Fix typo "parallel". 
* gnu/packages/bioconductor (r-anota)[description]: Fix typo.
 2019-05-22 18:07:50 -07:00
Vagrant Cascadian 0cea26bda1
gnu: r-anota: Fix typo "various". 
* gnu/packages/bioconductor (r-anota)[description]: Fix typo.
 2019-05-22 18:07:47 -07:00
Vagrant Cascadian ab8979fc2c
gnu: r-marray: Fix typo "function". 
* gnu/packages/bioconductor (r-marray)[description]: Fix typo.
 2019-05-22 18:07:43 -07:00
Ricardo Wurmus b3319f4c9e
gnu: r-quasr: Update to 1.24.2. 
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.24.2.
 2019-05-20 15:05:55 +02:00
Ricardo Wurmus 371c73b2e6
gnu: r-rhisat2: Update to 1.0.1. 
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.1.
 2019-05-20 15:05:48 +02:00
Ricardo Wurmus b8f6b813c9
gnu: r-regioner: Update to 1.16.2. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.2.
 2019-05-20 15:04:56 +02:00
Ricardo Wurmus 40b2f7bc0e
gnu: r-xcms: Update to 3.6.1. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.6.1.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus d1d6e13eb6
gnu: r-regioner: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.1.
 2019-05-11 12:05:32 +02:00
Ricardo Wurmus 496b024fde
gnu: Add r-rqc. 
* gnu/packages/bioconductor.scm (r-rqc): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 5e0241db84
gnu: Add r-quasr. 
* gnu/packages/bioconductor.scm (r-quasr): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 5865606459
gnu: Add r-rhisat2. 
* gnu/packages/bioconductor.scm (r-rhisat2): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 1444153913
gnu: Add r-sgseq. 
* gnu/packages/bioconductor.scm (r-sgseq): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 4d06ef4b71
gnu: Add r-rbowtie. 
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus 8c42f8f6e8
gnu: Add r-iclusterplus. 
* gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
 2019-05-10 13:31:01 +02:00
Ricardo Wurmus 93f8a00964
gnu: r-rgadem: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.32.0.
 2019-05-06 16:11:17 +02:00
Ricardo Wurmus 85c1d20fa6
gnu: r-chippeakanno: Update to 3.18.0. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.0.
[propagated-inputs]: Add r-rtracklayer.
 2019-05-06 00:14:59 +02:00
Ricardo Wurmus c24adbbf07
gnu: r-arrmnormalization: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.24.0.
 2019-05-06 00:14:59 +02:00
Ricardo Wurmus c2bfb978bf
gnu: r-progeny: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.6.0.
 2019-05-06 00:14:59 +02:00
Ricardo Wurmus 7d33d36c52
gnu: r-rbowtie2: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.6.0.
 2019-05-06 00:14:58 +02:00
Ricardo Wurmus 02530c2821
gnu: r-zfpkm: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.6.0.
 2019-05-06 00:14:58 +02:00
Ricardo Wurmus 67bc9255d5
gnu: r-webbioc: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.56.0.
 2019-05-06 00:14:58 +02:00
Ricardo Wurmus c881b9ef3a
gnu: r-widgettools: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.62.0.
 2019-05-06 00:14:58 +02:00