Commit Graph

48316 Commits

Author SHA1 Message Date
Maxim Cournoyer 5510bb01e9
doc: Add a 'Upgrading Guix' section to the 'Installation' chapter.
This follows a discussion regarding issue #36785 (see:
https://bugs.gnu.org/36785).

* doc/guix.texi (Upgrading Guix): New section.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-09-29 10:33:49 +09:00
Brian Leung e038bafe3b
gnu: emacs-tablist: Update to 1.0.
* gnu/packages/emacs-xyz.scm (emacs-tablist): Update to 1.0.
2019-09-29 03:09:36 +02:00
Brian Leung 52e62bbd76
gnu: emacs-prescient: Update to 3.3.
* gnu/packages/emacs-xyz.scm (emacs-prescient): Update to 3.3.
2019-09-29 02:09:54 +02:00
Brian Leung 0263366f75
gnu: emacs-hydra: Enable test.
* gnu/packages/emacs-xyz.scm (emacs-hydra): Enable test.
2019-09-29 01:59:22 +02:00
Brian Leung 135b573e83
gnu: emacs-helm-company: Enable test.
* gnu/packages/emacs-xyz.scm (emacs-helm-company): Enable test.
2019-09-29 01:56:26 +02:00
Brice Waegeneire de3896fb79
gnu: Add ell.
* gnu/packages/linux.scm (ell): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-28 22:56:40 +02:00
Pierre Langlois 569832dfaf
gnu: gpodder: Update to 3.10.10.
* gnu/packages/gpodder.scm (gpodder): Update to 3.10.10.
[inputs]: Add youtube-dl.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-28 22:56:40 +02:00
Ludovic Courtès ada9a19a2d
daemon: Strictly respect timeouts for 'guix offload'.
Until now it was up to 'guix offload' to honor timeouts.  Unfortunately
it would sometimes fail to do that, for example due to the libssh bug at
<https://bugs.libssh.org/T33>.  With this change, 'guix offload' is
automatically killed by the daemon when one of the timeouts expires.

Thus, data transfers performed by 'guix offload' now count as part of
the timeouts, rather than just actual build time.

* nix/libstore/build.cc (DerivationGoal::tryBuildHook): Pass true as the
'respectTimeouts' argument to 'childStarted'.
2019-09-28 22:56:40 +02:00
Ludovic Courtès a3af06ad65
offload: Include the port number in the machine lock file name.
This is useful when a single machine appears several time, with
different port numbers.

* guix/scripts/offload.scm (machine-slot-file): Add MACHINE's port to
the file name.
2019-09-28 22:56:40 +02:00
Ludovic Courtès 44941fd7db
gnu: libssh: Update to 0.9.0.
* gnu/packages/ssh.scm (libssh): Update to 0.9.0.  Of particular
interest for robust offloading is libssh commit
e4e51ccc1340e313c203842d0180a1c4e33c95cc, which fixes a bug whereby,
instead of honoring the per-session timeout, 'ssh_channel_read_timeout'
would end up passing an infinite timeout to 'poll':
see <https://bugs.libssh.org/T33>
2019-09-28 22:56:40 +02:00
Oleg Pykhalov 1c2fb2a3e7
gnu: emacs-mbsync: Update to 0.1.2-3.8f80c26.
This commit follows 7dd9f6e7cf.

* gnu/packages/emacs-xyz.scm (emacs-mbsync): Update to 0.1.2-3.8f80c26.
2019-09-28 23:11:28 +03:00
Oleg Pykhalov 7dd9f6e7cf
gnu: emacs-mbsync: Update to 0.1.2-2.8f80c26.
* gnu/packages/emacs-xyz.scm (emacs-mbsync): Update to 0.1.2-2.8f80c26.
2019-09-28 23:08:52 +03:00
Brian Leung beec3e3c7e
gnu: emacs-docker: Update to 1.3.0.
* gnu/packages/emacs-xyz.scm (emacs-docker): Update to 1.3.0.
2019-09-28 19:37:05 +02:00
Brian Leung 723fb01c62
gnu: emacs-dockerfile-mode: Update to 1.2-2.ed73e82.
* gnu/packages/emacs-xyz.scm (emacs-dockerfile-mode): Update to 1.2-2.ed73e82.
2019-09-28 19:34:38 +02:00
Brian Leung a8f69a2e9a
gnu: emacs-org-download: Update to 0.1.0-2.10c9d7c.
* gnu/packages/emacs-xyz.scm (emacs-org-download): Update to 0.1.0-2.10c9d7c.
2019-09-28 19:29:32 +02:00
Tobias Geerinckx-Rice 7b6eabc709
gnu: gpxsee: Update to 7.12.
* gnu/packages/gps.scm (gpxsee): Update to 7.12.
2019-09-28 17:23:25 +02:00
Tobias Geerinckx-Rice f99bc1af54
gnu: gthumb: Update to 3.8.1.
* gnu/packages/gnome.scm (gthumb): Update to 3.8.1.
2019-09-28 17:16:40 +02:00
Tobias Geerinckx-Rice 348d8e446f
doc: Don't support a risky mix of Guix & Nix.
* doc/guix.texi (Requirements): Remove instructions for sharing a store
and/or a daemon with Nix.
2019-09-28 17:16:40 +02:00
Tobias Geerinckx-Rice f4a1de0062
gnu: recode: Update to 3.7.6.
* gnu/packages/textutils.scm (recode): Update to 3.7.6.
[source]: Remove snippet.
2019-09-28 17:16:40 +02:00
Tobias Geerinckx-Rice 737e32a467
gnu: libmanette: Update to 0.2.3.
* gnu/packages/games.scm (libmanette): Update to 0.2.3.
2019-09-28 17:16:40 +02:00
Tobias Geerinckx-Rice 2d8dca9d36
gnu: libgnome-games-support: Don't use NAME in source URI.
* gnu/packages/gnome.scm (libgnome-games-support)[source]: Hard-code NAME.
2019-09-28 17:16:40 +02:00
Tobias Geerinckx-Rice 4c6d15cfb9
gnu: libgnome-games-support: Update to 1.4.4.
* gnu/packages/gnome.scm (libgnome-games-support): Update to 1.4.4.
2019-09-28 17:16:39 +02:00
Tobias Geerinckx-Rice 803f05841e
gnu: urlscan: Update to 0.9.4.
* gnu/packages/mail.scm (urlscan): Update to 0.9.4.
2019-09-28 17:16:39 +02:00
Danny Milosavljevic 2eefe1d887
gnu: fc-host-tools: Improve description.
* gnu/packages/embedded.scm (fc-host-tools)[description]: Improve description.
2019-09-28 15:40:59 +02:00
Danny Milosavljevic 1333eb5851
gnu: fc-host-tools: Update to 11.
* gnu/packages/embedded.scm (fc-host-tools): Update to 11.
[arguments]<:phases>[handle-tarbomb]: Delete phase.
[patch-installation-paths]: Modify.
2019-09-28 15:25:50 +02:00
Ricardo Wurmus e0c6c18371
gnu: r-gviz: Update to 1.28.3.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.28.3.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus b0a5be065e
gnu: r-mzr: Update to 2.18.1.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.18.1.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus 80004ec013
gnu: r-rhtslib: Update to 1.16.2.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.2.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus 272cb5a23f
gnu: r-rsamtools: Update to 2.0.1.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.1.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus d0983f294b
gnu: r-iranges: Update to 2.18.3.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.3.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus 7d8986c858
gnu: r-dt: Update to 0.9.
* gnu/packages/statistics.scm (r-dt): Update to 0.9.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus a416d68049
gnu: r-lambda-r: Update to 1.2.4.
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.4.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus 51997203fe
gnu: r-pkgconfig: Update to 2.0.3.
* gnu/packages/statistics.scm (r-pkgconfig): Update to 2.0.3.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus 2b953e0153
gnu: r-devtools: Update to 2.2.1.
* gnu/packages/statistics.scm (r-devtools): Update to 2.2.1.
[propagated-inputs]: Add r-rlang.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus a2b40398e9
gnu: r-microbenchmark: Update to 1.4-7.
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-7.
2019-09-28 12:24:15 +02:00
Ricardo Wurmus b2449a31b3
gnu: r-knitr: Update to 1.25.
* gnu/packages/statistics.scm (r-knitr): Update to 1.25.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus ebf0b43098
gnu: r-digest: Update to 0.6.21.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.21.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus 76e8d079a3
gnu: r-mgcv: Update to 1.8-29.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-29.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus b1a112f41b
gnu: r-assertable: Update to 0.2.7.
* gnu/packages/cran.scm (r-assertable): Update to 0.2.7.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus 446735de7d
gnu: r-parameters: Update to 0.2.0.
* gnu/packages/cran.scm (r-parameters): Update to 0.2.0.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus 4d86ea4aea
gnu: r-uwot: Update to 0.1.4.
* gnu/packages/cran.scm (r-uwot): Update to 0.1.4.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus cbe42da235
gnu: r-optparse: Update to 1.6.4.
* gnu/packages/cran.scm (r-optparse): Update to 1.6.4.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus 4978222ad7
gnu: r-spdep: Update to 1.1-3.
* gnu/packages/cran.scm (r-spdep): Update to 1.1-3.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus bc9a839fea
gnu: r-sf: Update to 0.8-0.
* gnu/packages/cran.scm (r-sf): Update to 0.8-0.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus b9d9bc6665
gnu: r-spdata: Update to 0.3.2.
* gnu/packages/cran.scm (r-spdata): Update to 0.3.2.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus 194c68263a
gnu: r-tidytree: Update to 0.2.8.
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.8.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus 7c27558ad7
gnu: r-rcpphnsw: Update to 0.2.0.
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.2.0.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus 6b286750d9
gnu: r-rcppannoy: Update to 0.0.13.
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.13.
2019-09-28 12:24:14 +02:00
Ricardo Wurmus f889a1577c
gnu: r-bayestestr: Update to 0.3.0.
* gnu/packages/cran.scm (r-bayestestr): Update to 0.3.0.
2019-09-28 12:24:13 +02:00
Ricardo Wurmus e7c8c68532
gnu: r-raster: Update to 3.0-7.
* gnu/packages/cran.scm (r-raster): Update to 3.0-7.
2019-09-28 12:24:13 +02:00