Commit Graph

41081 Commits

Author SHA1 Message Date
Ricardo Wurmus d40ebbf228
gnu: r-gprofiler: Update to 0.6.8.
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.8.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus 8e70b33c56
gnu: r-annotationhub: Update to 2.16.1.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.1.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus f70599cb78
gnu: r-edger: Update to 3.26.8.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.8.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus 801dc98f1f
gnu: r-ggraph: Update to 2.0.0.
* gnu/packages/cran.scm (r-ggraph): Update to 2.0.0.
[propagated-inputs]: Add r-graphlayouts, r-rlang, and r-tidygraph; remove
r-plyr.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus 995a20e892
gnu: r-msigdbr: Update to 7.0.1.
* gnu/packages/cran.scm (r-msigdbr): Update to 7.0.1.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus f396d343b7
gnu: r-ggeffects: Update to 0.12.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.12.0.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus 9a4706828c
gnu: r-ggformula: Update to 0.9.2.
* gnu/packages/cran.scm (r-ggformula): Update to 0.9.2.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus c90eebf791
gnu: r-insight: Update to 0.5.0.
* gnu/packages/cran.scm (r-insight): Update to 0.5.0.
2019-09-08 00:30:33 +02:00
Ricardo Wurmus f11920c759
gnu: r-ggpubr: Update to 0.2.3.
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.3.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 9960ad55be
gnu: r-geometry: Update to 0.4.4.
* gnu/packages/cran.scm (r-geometry): Update to 0.4.4.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 02efab6917
gnu: r-feather: Update to 0.3.4.
* gnu/packages/cran.scm (r-feather): Update to 0.3.4.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 5e7c6e54c8
gnu: r-matrixstats: Update to 0.55.0.
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.55.0.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus de162a1509
gnu: r-rcpparmadillo: Update to 0.9.700.2.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.700.2.0.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 2b705168e9
gnu: r-devtools: Update to 2.2.0.
* gnu/packages/statistics.scm (r-devtools): Update to 2.2.0.
[propagated-inputs]: Add r-covr, r-crayon, r-desc, r-dt, r-ellipsis, r-glue,
and r-rversions.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus e5cf3722c6
gnu: r-gdtools: Update to 0.2.0.
* gnu/packages/statistics.scm (r-gdtools): Update to 0.2.0.
[inputs]: Add freetype.
[propagated-inputs]: Add r-systemfonts; remove r-withr.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 9567bd8dd9
gnu: Add r-tidygraph.
* gnu/packages/cran.scm (r-tidygraph): New variable.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 9390300915
gnu: Add r-graphlayouts.
* gnu/packages/cran.scm (r-graphlayouts): New variable.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 6983178b06
gnu: Add r-systemfonts.
* gnu/packages/cran.scm (r-systemfonts): New variable.
2019-09-08 00:30:32 +02:00
Ricardo Wurmus 7a5ed348c0
gnu: Add r-covr.
* gnu/packages/cran.scm (r-covr): New variable.
2019-09-08 00:30:32 +02:00
Arun Isaac 9d280ef2a8
gnu: poussetaches: Update to 0.0.2.
* gnu/packages/web.scm (poussetaches): Update to 0.0.2.
2019-09-08 00:02:59 +05:30
Julien Lepiller e877f4d012
gnu: nml: Fix for newer pillow version.
* gnu/packages/game-development.scm (nml)[arguments]: Add a phase to fix
for newer pillow.
2019-09-07 20:14:50 +02:00
Kei Kebreau c3a7dae831
gnu: qtermwidget: Enable UTF-8 support.
* gnu/packages/lxqt.scm (qtermwidget)[inputs]: Add utf8proc.
2019-09-07 09:17:34 -04:00
Rutger Helling 08b3521000
gnu: wireguard: Update to 0.0.20190905.
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190905.
2019-09-07 11:16:24 +02:00
Mark H Weaver f66aee3d0d
gnu: linux-libre: Update to 5.2.13.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.13.
(linux-libre-5.2-pristine-source): Update hash.
2019-09-06 20:42:05 -04:00
Mark H Weaver a6ec7eba26
gnu: linux-libre@4.14: Update to 4.19.71.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.71.
(linux-libre-4.19-pristine-source): Update hash.
2019-09-06 20:41:23 -04:00
Mark H Weaver d45f5c40a2
gnu: linux-libre@4.14: Update to 4.14.142.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.142.
(linux-libre-4.14-pristine-source): Update hash.
2019-09-06 20:40:18 -04:00
Mark H Weaver 67ad69b768
gnu: linux-libre@4.9: Update to 4.9.191.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.191.
(linux-libre-4.9-pristine-source): Update hash.
2019-09-06 20:39:13 -04:00
Mark H Weaver be0fb599e7
gnu: linux-libre@4.4: Update to 4.4.191.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.191.
(linux-libre-4.4-pristine-source): Update hash.
2019-09-06 20:38:06 -04:00
Mark H Weaver 3fe53f49a7
Revert "services: Add ‘/usr/bin/env’ special file."
This reverts commit 3b38bf141a.

The Guix project discussed this years ago and decided against including
/usr/bin/env.  That decision should not be reversed without a wider
discussion.
2019-09-06 19:35:08 -04:00
Ricardo Wurmus a35f153d54
gnu: python-scipy: Update to 1.3.1.
* gnu/packages/python-xyz.scm (python-scipy): Update to 1.3.1.
(python2-scipy): Keep at version 1.2.2.
2019-09-07 00:48:12 +02:00
L p R n d n 8cc5d3dc4d
gnu: xfce4-panel: Fix tzdata path.
* gnu/packages/xfce.scm (xfce4-panel)[inputs]: Add tzdata.
[arguments] Add Fix-tzdata-path phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-07 00:36:34 +02:00
L p R n d n 64200f0197
gnu: libxfce4ui: Add vendor.
* gnu/packages/xfce.scm (libxfce4ui)[arguments]: Add #:configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-07 00:36:34 +02:00
L p R n d n 48af935672
gnu: libxfce4ui: Add gobject-introspection support.
* gnu/packages/xfce.scm (libxfce4ui): Add gobject-introspection to native-inputs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-07 00:36:34 +02:00
L p R n d n 279b5730d4
gnu: xfconf: Fix tests.
* gnu/packages/xfce.scm (xfconf)[arguments]: Rename check phase to
  custom-check.
  [native-inputs]: Add dbus.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-07 00:36:34 +02:00
L p R n d n dbfd5a1380
gnu: xfconf: Add vala support.
* gnu/packages/xfce.scm (xfconf): Add vala to native-inputs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-07 00:36:34 +02:00
L p R n d n 2c10c4182c
gnu: xfconf: Add support for gobject-introspection.
* gnu/packages/xfce.scm (xfconf): Add gobject-introspection to native-inputs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-07 00:36:34 +02:00
Ludovic Courtès 4961364f16
gnu: qtwebkit: Disable non-x86 builds.
* gnu/packages/qt.scm (qtwebkit)[supported-systems]: New field.
2019-09-07 00:36:34 +02:00
Ludovic Courtès 61acb764ed
gnu: ecl-net.didierverna.asdf-flv: Fix variable name.
Fixes a typo in 0403d01f01.

* gnu/packages/lisp.scm (ecl-net.didierverna.asdf-flv): New name of the
second occurrence of 'ecl-alexandria'.
2019-09-07 00:36:34 +02:00
Ricardo Wurmus 7fc41e6e66
gnu: Add emacs-poet-theme.
* gnu/packages/emacs-xyz.scm (emacs-poet-theme): New variable.
2019-09-06 23:29:34 +02:00
Tobias Geerinckx-Rice ccbd1648f4
gnu: exim: Update to 4.92.2 [fixes CVE-2019-15846].
* gnu/packages/mail.scm (exim): Update to 4.92.2.
2019-09-06 17:36:04 +02:00
Efraim Flashner cae5312758
gnu: crates-io.scm: Fix several home-pages.
* gnu/packages/crates-io.scm (rust-constant-time-eq, rust-fixedbitset,
rust-futures, rust-pico-sys, rust-pkg-config, rust-quick-error,
rust-remove-dir-all, rust-spin, rust-tempdir, rust-traitobject,
rust-void)[home-page]: Update to correct home-page.
2019-09-06 17:25:03 +03:00
Ricardo Wurmus 8205534569
gnu: Add samblaster.
* gnu/packages/bioinformatics.scm (samblaster): New variable.
2019-09-06 15:00:49 +02:00
Ricardo Wurmus 7cd446fd3f
gnu: Add r-txdb-celegans-ucsc-ce6-ensgene.
* gnu/packages/bioconductor.scm (r-txdb-celegans-ucsc-ce6-ensgene): New
variable.
2019-09-06 15:00:49 +02:00
Efraim Flashner 41ba4cf150
gnu: Add rust-parity-wasm.
* gnu/packages/crates-io.scm (rust-parity-wasm): New variable.
2019-09-06 15:46:04 +03:00
Efraim Flashner 540d830edc
gnu: Add rust-time.
* gnu/packages/crates-io.scm (rust-time): New variable.
2019-09-06 15:46:03 +03:00
Efraim Flashner 4282cbe9b0
gnu: Add rust-semver-parser-0.7.
* gnu/packages/crates-io.scm (rust-semver-parser-0.7): New variable.
2019-09-06 15:46:03 +03:00
Efraim Flashner 516b2f1a3b
gnu: Add rust-getopts.
* gnu/packages/crates-io.scm (rust-getopts): New variable.
2019-09-06 15:46:03 +03:00
Efraim Flashner 9a5ee9928a
gnu: Add rust-clang-sys.
* gnu/packages/crates-io.scm (rust-clang-sys): New variable.
2019-09-06 15:46:03 +03:00
Efraim Flashner cef7de6fa6
gnu: Add rust-glob-0.2.
* gnu/packages/crates-io.scm (rust-glob-0.2): New variable.
2019-09-06 15:46:03 +03:00
Efraim Flashner b79eab74a1
gnu: Add rust-glob.
* gnu/packages/crates-io.scm (rust-glob): New variable.
2019-09-06 15:46:03 +03:00
Efraim Flashner 01519b3d9f
gnu: Add rust-sourcefile.
* gnu/packages/crates-io.scm (rust-sourcefile): New variable.
2019-09-06 15:46:02 +03:00
Efraim Flashner 61322df019
gnu: Add rust-miow-0.2.
* gnu/packages/crates-io.scm (rust-miow-0.2): New variable.
2019-09-06 15:46:02 +03:00
Efraim Flashner 5ae8c1fba3
gnu: Add rust-miow.
* gnu/packages/crates-io.scm (rust-miow): New variable.
2019-09-06 15:46:02 +03:00
Efraim Flashner 1241007f16
gnu: Add rust-ansi-term.
* gnu/packages/crates-io.scm (rust-ansi-term): New variable.
2019-09-06 15:46:02 +03:00
Efraim Flashner fbf37a7bff
gnu: Add rust-socket2.
* gnu/packages/crates-io.scm (rust-socket2): New variable.
2019-09-06 15:46:02 +03:00
Efraim Flashner 3494be3515
gnu: Add rust-tar.
* gnu/packages/crates-io.scm (rust-tar): New variable.
2019-09-06 15:46:01 +03:00
Efraim Flashner 27438eb817
gnu: Add rust-filetime.
* gnu/packages/crates-io.scm (rust-filetime): New variable.
2019-09-06 15:46:01 +03:00
Efraim Flashner 1a9ce2a252
gnu: Add rust-xattr.
* gnu/packages/crates-io.scm (rust-xattr): New variable.
2019-09-06 15:46:01 +03:00
Efraim Flashner 5ef6549e12
gnu: Add rust-tempfile.
* gnu/packages/crates-io.scm (rust-tempfile): New variable.
2019-09-06 15:46:01 +03:00
Efraim Flashner 1515ecae21
gnu: Add rust-lzma-sys.
* gnu/packages/crates-io.scm (rust-lzma-sys): New variable.
2019-09-06 15:46:01 +03:00
Efraim Flashner f32a4ba746
gnu: Add rust-jemalloc-sys.
* gnu/packages/crates-io.scm (rust-jemalloc-sys): New variable.
2019-09-06 15:46:01 +03:00
Efraim Flashner c891c7f174
gnu: Add rust-cargon.
* gnu/packages/crates-io.scm (rust-cargon): New variable.
2019-09-06 15:46:00 +03:00
Efraim Flashner f007411308
gnu: Add rust-rustc-demangle.
* gnu/packages/crates-io.scm (rust-rustc-demangle): New variable.
2019-09-06 15:46:00 +03:00
Efraim Flashner eda57f4834
gnu: Add rust-pico-sys.
* gnu/packages/crates-io.scm (rust-pico-sys): New variable.
2019-09-06 15:46:00 +03:00
Efraim Flashner 02f66e9022
gnu: Add rust-gcc.
* gnu/packages/crates-io.scm (rust-gcc): New variable.
2019-09-06 15:46:00 +03:00
Efraim Flashner f51c47b528
gnu: Add rust-openssl-probe.
* gnu/packages/crates-io.scm (rust-openssl-probe): New variable.
2019-09-06 15:46:00 +03:00
Efraim Flashner 5b15d635ed
gnu: Add rust-netlib-src.
* gnu/packages/crates-io.scm (rust-netlib-src): New variable.
2019-09-06 15:45:59 +03:00
Efraim Flashner e81e48ef29
gnu: Add rust-miniz-sys.
* gnu/packages/crates-io.scm (rust-miniz-sys): New variable.
2019-09-06 15:45:59 +03:00
Efraim Flashner 3a3c72e6b1
gnu: Add rust-miniz-oxide.
* gnu/packages/crates-io.scm (rust-miniz-oxide): New variable.
2019-09-06 15:45:59 +03:00
Efraim Flashner 94c715e613
gnu: Add rust-memmap-0.6.
* gnu/packages/crates-io.scm (rust-memmap@0.6): New variable.
2019-09-06 15:45:59 +03:00
Efraim Flashner 701eaebc66
gnu: Add rust-memmap.
* gnu/packages/crates-io.scm (rust-memmap): New variable.
2019-09-06 15:45:59 +03:00
Efraim Flashner aeaa601260
gnu: Add rust-vcpkg.
* gnu/packages/crates-io.scm (rust-vcpkg): New variable.
2019-09-06 15:45:59 +03:00
Efraim Flashner 6f5cd37a60
gnu: Add rust-libloading.
* gnu/packages/crates-io.scm (rust-libloading): New variable.
2019-09-06 15:45:58 +03:00
Efraim Flashner 412c43b423
gnu: Add rust-compiler-builtins.
* gnu/packages/crates-io.scm (rust-compiler-builtins): New hidden variable.
2019-09-06 15:45:58 +03:00
Efraim Flashner e78973f45b
gnu: Add rust-stacker.
* gnu/packages/crates-io.scm (rust-stacker): New variable.
2019-09-06 15:45:58 +03:00
Efraim Flashner 2446b451e2
gnu: Add rust-cmake.
* gnu/packages/crates-io.scm (rust-cmake): New variable.
2019-09-06 15:45:58 +03:00
Efraim Flashner 5bd7965e11
gnu: Add rust-cc.
* gnu/packages/crates-io.scm (rust-cc): New variable.
2019-09-06 15:45:58 +03:00
Efraim Flashner 313778655e
gnu: Add rust-log.
* gnu/packages/crates-io.scm (rust-log): New variable.
2019-09-06 15:45:58 +03:00
Efraim Flashner c2c0ac1451
gnu: Add rust-rustc-serialize.
* gnu/packages/crates-io.scm (rust-rustc-serialize): New variable.
2019-09-06 15:45:57 +03:00
Efraim Flashner c988c9bb85
gnu: Add rust-base-x.
* gnu/packages/crates-io.scm (rust-base-x): New variable.
2019-09-06 15:45:57 +03:00
Efraim Flashner 90c48ddd76
gnu: Add rust-adler32.
* gnu/packages/crates-io.scm (rust-adler32): New variable.
2019-09-06 15:45:57 +03:00
Efraim Flashner f81d58b8b3
gnu: Add rust-tempdir.
* gnu/packages/crates-io.scm (rust-tempdir): New variable.
2019-09-06 15:45:57 +03:00
Efraim Flashner 2f8e436a29
gnu: Add rust-rand-0.3.
* gnu/packages/crates-io.scm (rust-rand-0.3): New variable.
2019-09-06 15:45:57 +03:00
Efraim Flashner 5ef82ec8ba
gnu: Add rust-rand.
* gnu/packages/crates-io.scm (rust-rand): New variable.
2019-09-06 15:45:56 +03:00
Efraim Flashner e15f55208f
services: Fix typo.
This is a follow-up to 3b38bf141a.

* gnu/services/base.scm (%base-services): Remove duplicated line.
2019-09-06 13:52:33 +03:00
Tobias Geerinckx-Rice 3b38bf141a
services: Add ‘/usr/bin/env’ special file.
* gnu/services/base.scm (%base-services): Add ‘/usr/bin/env‘ to
special-files-service-type.
2019-09-06 12:24:32 +02:00
Brian Leung 43931643a6
gnu: Add emacs-leetcode.
* gnu/packages/emacs-xyz.scm (emacs-leetcode): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:37:41 +03:00
Brian Leung 14c9c456c7
gnu: emacs-robe: Update to 0.8.2.
* gnu/packages/emacs-xyz.scm (emacs-robe): Update to 0.8.2.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:36:35 +03:00
Brian Leung 141d8a896f
gnu: emacs-flycheck-haskell: Include .hs file.
* gnu/packages/emacs-xyz.scm (emacs-flycheck-haskell): Include package file.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:32:56 +03:00
Brian Leung a9ca0325b5
gnu: emacs-evil-traces: Enable tests.
* gnu/packages/emacs-xyz.scm (emacs-evil-traces): Enable tests.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:29 +03:00
Brian Leung 4278537e85
gnu: emacs-org-ql: Enable tests.
* gnu/packages/emacs-xyz.scm (emacs-org-ql): Enable tests.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:19 +03:00
Brian Leung d6ac801591
gnu: emacs-sudo-edit: Enable tests.
* gnu/packages/emacs-xyz.scm (emacs-sudo-edit): Enable tests.
[native-inputs]: Add emacs-undercover.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:11 +03:00
Brian Leung 1acf8e7ea8
gnu: emacs-evil-exchange: Enable tests.
* gnu/packages/emacs-xyz.scm (emacs-evil-exchange): Enable tests.
[native-inputs]: Add emacs-ert-runner.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:26:02 +03:00
Brian Leung a8afeb058e
gnu: emacs-evil-expat: Enable tests.
* gnu/packages/emacs-xyz.scm (emacs-evil-expat): Enable tests.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:25:47 +03:00
Brian Leung 8deabdba58
gnu: emacs-elisp-demos: Enable tests.
* gnu/packages/emacs-xyz.scm (emacs-elisp-demos): Enable tests.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:25:27 +03:00
Brian Leung 9b4ea95bbe
gnu: emacs-evil-owl: Update to 0.0.1-3.24e5f43.
* gnu/packages/emacs-xyz.scm (emacs-evil-owl): Update to 0.0.1-3.24e5f43.
[source]: Enable tests.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:25:19 +03:00
Brian Leung 473d636072
gnu: emacs-evil-multiedit: Enable tests.
* gnu/packages/emacs-xyz.scm (emacs-evil-multiedit): Enable tests.
[inputs]: Add emacs-ert-runner.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-09-06 12:24:59 +03:00
Ricardo Wurmus 66d2133500
gnu: Add texlive-booktabs.
* gnu/packages/tex.scm (texlive-booktabs): New variable.
2019-09-05 22:45:42 +02:00
Ricardo Wurmus 69f0c8cf55
gnu: Add texlive-siunitx.
* gnu/packages/tex.scm (texlive-siunitx): New variable.
2019-09-05 22:45:42 +02:00
Ricardo Wurmus 11ecf9f48f
gnu: Add texlive-standalone.
* gnu/packages/tex.scm (texlive-standalone): New variable.
2019-09-05 22:45:42 +02:00