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18628 Commits

Author SHA1 Message Date
Ludovic Courtès 1f4f2360ad
gnu: guile-json: Update to 0.6.0. 
* gnu/packages/guile.scm (guile-json): Update to 0.6.0.
 2017-01-17 23:57:15 +01:00
Julien Lepiller fd6e260ef7
gnu: Add ocaml-ocurl. 
* gnu/pcakages/ocaml.scm (ocaml-ocurl): New variable.
 2017-01-17 23:22:07 +01:00
Julien Lepiller 800ab1fb16
gnu: Add ocaml-jsonm. 
* gnu/packages/ocaml.scm (ocaml-jsonm): New variable.
 2017-01-17 23:21:42 +01:00
Julien Lepiller 84290923d9
gnu: Add ocaml-uutf. 
* gna/packages/ocaml.scm (ocaml-uutf): New variable.
 2017-01-17 23:21:22 +01:00
Julien Lepiller 33f16b9a57
gnu: Add ocaml-uchar. 
* gnu/packages/ocaml.scm (ocaml-uchar): New variable.
 2017-01-17 23:20:55 +01:00
Julien Lepiller 6e9b678efe
gnu: Add ocaml-ulex. 
* gnu/packages/ocaml.scm (ocaml-ulex): New variable.
 2017-01-17 23:20:13 +01:00
Julien Lepiller 036b857978
gnu: Add ocaml-xmlm. 
* gnu/packages/ocaml.scm (ocaml-xmlm): New variable.
 2017-01-17 23:14:42 +01:00
Julien Lepiller 33e0702d8a
gnu: Add ocaml-bos. 
* gnu/packages/ocaml.scm (ocaml-bos): New variable.
 2017-01-17 23:14:38 +01:00
Julien Lepiller fbf38b0985
gnu: Add ocaml-fpath. 
* gnu/packages/ocaml.scm (ocaml-fpath): New variable.
 2017-01-17 23:14:34 +01:00
Julien Lepiller 9dc7dcb261
gnu: Add ocaml-logs. 
* gnu/packages/ocaml.scm (ocaml-logs): New variable.
 2017-01-17 23:13:19 +01:00
Ricardo Wurmus 66da3a9f31
gnu: Add r-msnid. 
* gnu/packages/bioinformatics.scm (r-msnid): New variable.
 2017-01-17 21:46:50 +01:00
Ricardo Wurmus 11879284cb
gnu: Add r-msnbase. 
* gnu/packages/bioinformatics.scm (r-msnbase): New variable.
 2017-01-17 21:46:50 +01:00
Ricardo Wurmus 6a67e181ac
gnu: Add r-pcamethods. 
* gnu/packages/bioinformatics.scm (r-pcamethods): New variable.
 2017-01-17 21:46:50 +01:00
Ricardo Wurmus 4aa7d592f1
gnu: Add r-mzid. 
* gnu/packages/bioinformatics.scm (r-mzid): New variable.
 2017-01-17 21:46:50 +01:00
Ricardo Wurmus 7c08afaf7b
gnu: Add r-vsn. 
* gnu/packages/bioinformatics.scm (r-vsn): New variable.
 2017-01-17 21:46:50 +01:00
Ricardo Wurmus 05c7e5fb76
gnu: Add r-affy. 
* gnu/packages/bioinformatics.scm (r-affy): New variable.
 2017-01-17 21:46:49 +01:00
Ricardo Wurmus 5c9d15055f
gnu: Add r-affyio. 
* gnu/packages/bioinformatics.scm (r-affyio): New variable.
 2017-01-17 21:46:49 +01:00
Ricardo Wurmus 71676a1f4c
gnu: Add r-mzr. 
* gnu/packages/bioinformatics.scm (r-mzr): New variable.
 2017-01-17 21:46:49 +01:00
Ricardo Wurmus ae26217430
gnu: Add r-protgenerics. 
* gnu/packages/bioinformatics.scm (r-protgenerics): New variable.
 2017-01-17 21:46:49 +01:00
Ricardo Wurmus 0e7d058e44
gnu: Add r-maldiquant. 
* gnu/packages/bioinformatics.scm (r-maldiquant): New variable.
 2017-01-17 21:46:49 +01:00
Ricardo Wurmus 1f40e73cb5
gnu: Add r-raremetals2. 
* gnu/packages/bioinformatics.scm (r-raremetals2): New variable.
 2017-01-17 21:46:48 +01:00
Ricardo Wurmus fb1e528ef1
gnu: Add r-seqminer. 
* gnu/packages/bioinformatics.scm (r-seqminer): New variable.
 2017-01-17 21:46:48 +01:00
Ricardo Wurmus 26a281ef27
gnu: Add r-compquadform. 
* gnu/packages/statistics.scm (r-compquadform): New variable.
 2017-01-17 21:46:48 +01:00
Ricardo Wurmus 769fc6bb18
gnu: Add ribodiff. 
* gnu/packages/bioinformatics.scm (ribodiff): New variable.
 2017-01-17 21:46:48 +01:00
Ricardo Wurmus e84efc50d7
gnu: Add hisat2. 
* gnu/packages/bioinformatics.scm (hisat2): New variable.
 2017-01-17 21:46:48 +01:00
Ricardo Wurmus 5f764dd7ff
gnu: Add r-fivethirtyeight. 
* gnu/packages/statistics.scm (r-fivethirtyeight): New variable.
 2017-01-17 21:46:47 +01:00
Ricardo Wurmus 40effef7ca
gnu: powertabeditor: Update to 2.0.0-alpha9. 
* gnu/packages/music.scm (powertabeditor): Update to 2.0.0-alpha9.
[source]: Simplify snippet.
[arguments]: Adjust phases; remove unnecessary configure flag.
 2017-01-17 21:46:25 +01:00
Danny Milosavljevic 4c9c8a294e
gnu: boost: Update to 1.63.0. 
* gnu/packages/boost.scm (boost): Update to 1.63.0.
 2017-01-17 21:34:39 +01:00
Tobias Geerinckx-Rice 79e90f05b6
gnu: cups-filters: Disable mutool integration. 
* gnu/packages/cups.scm (cups-filters)[arguments]: Add ‘--disable-mutool’
to #:configure-flags.
[inputs]: Remove mupdf.
 2017-01-17 15:14:25 -05:00
Leo Famulari 46076d08ed
Revert "gnu: cups-filters: Disable mutool integration." 
This change would cause 594 packages to be rebuilt, so it was moved to
the staging branch.

This reverts commit 58a7bbc5fe.
 2017-01-17 15:13:54 -05:00
Leo Famulari cf3768fa06
gnu: webkitgtk: Update to 2.14.3 [security fixes]. 
Fixes CVE-2016-{7586,7589,7592,7599,7623,7632,7635,7639,7641,7645,7652,7654,7656}.

* gnu/packages/webkit.scm (webkitgtk): Update to 2.14.3.
 2017-01-17 14:56:13 -05:00
Tobias Geerinckx-Rice 58a7bbc5fe
gnu: cups-filters: Disable mutool integration. 
* gnu/packages/cups.scm (cups-filters)[arguments]: Add ‘--disable-mutool’
to #:configure-flags.
[inputs]: Remove mupdf.
 2017-01-17 18:42:37 +01:00
Tobias Geerinckx-Rice 16869cecf6
gnu: libpsl: Update to 0.17.0. 
* gnu/packages/web.scm (libpsl): Update to 0.17.0.
 2017-01-17 18:42:36 +01:00
Tobias Geerinckx-Rice cdb93e50ea
gnu: proxychains-ng: Update to 4.12. 
* gnu/packages/networking.scm (proxychains-ng): Update to 4.12.
 2017-01-17 18:42:34 +01:00
Marius Bakke 718c12786b
gnu: password-store: Install bash completions. 
* gnu/packages/password-utils.scm (password-store)[arguments]: Add
'install-shell-completions' phase.
 2017-01-17 16:18:35 +01:00
Ricardo Wurmus c554c6bab8
gnu: gnucash: Update to 2.6.15. 
* gnu/packages/gnucash.scm (gnucash): Update to 2.6.15.
 2017-01-17 15:07:08 +01:00
Björn Höfling 065d012511
gnu: Add proj.4. 
* gnu/packages/geo.scm (proj.4): New variable.
(gnome-maps): Use license: prefix.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-17 14:41:08 +01:00
Marius Bakke f68647299c
gnu: xscreensaver: Update to 5.36. 
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.36.
 2017-01-17 14:21:10 +01:00
Leo Famulari 351ab2c13f
Merge branch 'master' into staging 2017-01-17 03:56:08 -05:00
Thomas Danckaert 603308ee60
gnu: doxygen: Use sh from the store. 
* gnu/packages/documentation.scm (doxygen)[inputs]: Add bash-minimal.
[arguments]: Add phase to add store prefix to "/bin/sh".

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-17 03:55:31 -05:00
Leo Famulari 7e5b944e8f
gnu: libdrm: Update to 2.4.74. 
* gnu/packages/xdisorg.scm (libdrm): Update to 2.4.74.
 2017-01-17 03:55:31 -05:00
Leo Famulari b4fddeae20
gnu: flac: Update to 1.3.2. 
* gnu/packages/xiph.scm (flac): Update to 1.3.2.
 2017-01-17 03:55:30 -05:00
Leo Famulari 8efd10cd11
gnu: speex: Update to 1.2.0. 
* gnu/packages/xiph.scm (speex): Update to 1.2.0.
 2017-01-17 03:55:30 -05:00
Leo Famulari b1972a83e8
gnu: libsndfile: Update to 1.0.27. 
* gnu/packages/pulseaudio.scm (libsndfile): Update to 1.0.27.
 2017-01-17 03:55:30 -05:00
Leo Famulari ae6591efa5
gnu: perl-image-exiftool: Update to 10.40. 
* gnu/packages/photo.scm (perl-image-exiftool): Update to 10.40.
[synopsis, description]: Mention more capabilities.
 2017-01-17 03:50:36 -05:00
Ricardo Wurmus 265afbdfe7
gnu: ghc-quickcheck-instances: Update to 0.3.12. 
* gnu/packages/haskell.scm (ghc-quickcheck-instances): Update to 0.3.12.
[inputs]: Add ghc-scientific and ghc-vector.
 2017-01-17 03:58:19 +01:00
Leo Famulari 19083a5eee
gnu: imagemagick: Update to 6.9.7-4 [security fixes]. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-4.
 2017-01-16 18:39:41 -05:00
Leo Famulari 9381a02a53
gnu: Add scrypt. 
* gnu/packages/crypto.scm (scrypt): New variable.
 2017-01-16 18:02:14 -05:00
Ricardo Wurmus ce9701fb95
gnu: Add emacs-stripe-buffer. 
* gnu/packages/emacs.scm (emacs-stripe-buffer): New variable.
 2017-01-16 23:37:43 +01:00
Ricardo Wurmus 0b35f11d76
gnu: Add emacs-git-timemachine. 
* gnu/packages/emacs.scm (emacs-git-timemachine): New variable.
 2017-01-16 23:37:43 +01:00