Commit Graph

20523 Commits

Author SHA1 Message Date
Ricardo Wurmus b2955e224e
gnu: python-pysam: Fix tests, again.
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Run nosetests
explicitly with a single process.
2017-04-24 18:46:28 +02:00
Efraim Flashner c136240efc
gnu: diamond: Enable building on all architectures.
* gnu/packages/bioinformatics.scm (diamond)[supported-systems]: Remove
field.
2017-04-24 19:30:10 +03:00
Efraim Flashner f0ef7b47d3
gnu: libevent: Disable regress tests.
* gnu/packages/libevent.scm (libevent)[arguments]: Disable the 'regress'
tests.
2017-04-24 19:30:02 +03:00
Kei Kebreau 0611abff32
gnu: wmfire: Update source code for new GDK versions.
* gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnustep.scm (wmfire)[source]: Add patch.
2017-04-24 11:23:31 -04:00
Efraim Flashner 094f4b53af
gnu: unionfs-fuse: Enable tests.
* gnu/packages/linux.scm (unionfs-fuse)[arguments]: Replace 'check phase.
[native-inputs]: Add python, python-pytest.
2017-04-24 12:11:55 +03:00
Efraim Flashner 2f861edf5c
gnu: unionfs-fuse: Update to 2.0.
* gnu/packages/linux.scm (unionfs-fuse): Update to 2.0.
[home-page]: Update to Github page.
2017-04-24 12:10:32 +03:00
Efraim Flashner 092b7b3e69
gnu: wiredtiger: Enable building on aarch64-linux.
* gnu/packages/databases.scm (wiredtiger)[supported-systems]: Add
aarch64-linux to supported-systems.
2017-04-24 11:35:43 +03:00
Efraim Flashner 0aa872eadf
gnu: reptyr: Remove aarch64 from supported systems.
* gnu/packages/screen.scm (reptyr)[supported-systems]: Remove
aarch64-linux from supported-systems.
2017-04-24 11:35:39 +03:00
Efraim Flashner 8df1ee3f33
gnu: sdl-gfx: Enable building on all architectures.
* gnu/packages/sdl.scm (sdl-gfx)[arguments]: On non-Intel architectures
disable mmx processor instructions.
[supported-systems]: Remove field.
2017-04-24 11:35:35 +03:00
Efraim Flashner b9af056408
gnu: libsmpeg: Set source file-name.
* gnu/packages/video.scm (libsmpeg)[source]: Add file-name field.
2017-04-24 10:30:21 +03:00
Leo Famulari 43acfcb2c7
libcroco: Fix CVE-2017-{7960,7961}.
* gnu/packages/gnome.scm (libcroco)[replacement]: New field.
(libcroco/fixed): New variable.
* gnu/packages/patches/libcroco-CVE-2017-7960.patch,
gnu/packages/patches/libcroco-CVE-2017-7961.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2017-04-24 01:10:23 -04:00
Marius Bakke 8030679397
gnu: xorg-server@1.19.3: Correct hash.
This hash got reset back to 1.19.2 when 1f49cd546e was merged (1524851f58).

* gnu/packages/xorg.scm (xorg-server-1.19.3)[source]: Update sha256 checksum.
2017-04-24 00:55:28 +02:00
Vasile Dumitrascu 638787307e
gnu: Add emacs-google-maps.
* gnu/packages/emacs.scm (emacs-google-maps): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-23 16:52:06 -04:00
Ricardo Wurmus a71d769d1e
gnu: r-minimal: Update to 3.4.0.
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.0.
[arguments]: Set timezone to UTC+1 in "set-timezone" phase to avoid regression
test failure.
2017-04-23 22:48:19 +02:00
Ricardo Wurmus d28fa5cc70
gnu: Add font-linuxlibertine.
* gnu/packages/fonts.scm (font-linuxlibertine): New variable.
2017-04-23 22:48:19 +02:00
Efraim Flashner f3bd17281a
gnu: obs: Mark as supported only on Intel systems.
* gnu/packages/video.scm (obs)[supported-systems]: New field.
[arguments]: Remove armhf and mips specific substitutions.
2017-04-23 22:16:46 +03:00
Marius Bakke 769df80ded
gnu: nss: Further increase test timeouts on armhf.
* gnu/packages/gnuzilla.scm (nss)[arguments]<#:phases>: Add a substitution
when target platform is armhf.
2017-04-23 11:34:45 +02:00
Sergei Trofimovich 644f95111c
Increase "TasksMax" in 'guix-daemon.service'.
* etc/guix-daemon.service.in (TasksMax): Increase to 8192.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-04-22 20:45:08 -04:00
Ludovic Courtès fd6ec6bd99
gnu: coreutils@8.27: Do not apply 'coreutils-cut-huge-range-test.patch'.
This patch is not needed in 8.27.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/packages/base.scm (coreutils-8.27)[arguments]: New field.
2017-04-23 01:24:57 +02:00
Daniel Pimentel b59af0c0ce
gnu: Add aspell-dict-pt-br.
* gnu/packages/aspell.scm (aspell-dict-pt-br): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-23 01:24:42 +02:00
Amirouche 946742e3e5
gnu: guile-bytestructures: Update to 91d042e
* gnu/packages/guile.scm (guile-bytestructures): Update to 91d042e.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-23 01:00:39 +02:00
Leo Famulari 1524851f58
Merge branch 'master' into staging 2017-04-22 18:27:12 -04:00
Ludovic Courtès ed9fb46b16
gnu: emacs-guix: Adjust to both 2.2 and 2.0.
* gnu/packages/emacs.scm (emacs-guix)[arguments]: In #:configure-flags,
use 'find-files' to determine the --with-guix-site-dir argument.
2017-04-23 00:03:17 +02:00
Ludovic Courtès ab2419e56a
gnu: guix: Honor the effective Guile version.
* gnu/packages/package-management.scm (guix-0.12.0)[arguments]: In
'wrap-program' phase, use the effective Guile version rather than "2.0".
Add #:modules argument.
2017-04-23 00:03:17 +02:00
Ludovic Courtès 38f10b0c4e
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 25a4929.
2017-04-23 00:03:17 +02:00
Ricardo Wurmus 3b74b7a283
gnu: r-caret: Update to 6.0-76.
* gnu/packages/statistics.scm (r-caret): Update to 6.0-76.
[propagated-inputs]: Add r-lattice and r-nlme.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus 96071a6db2
gnu: r-lme4: Update to 1.1-13.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-13.
[propagated-inputs]: Add r-lattice and r-matrix.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus 0d5bc9382a
gnu: r-quantreg: Update to 5.33.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.33.
[propagated-inputs]: Add r-matrix.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus f1a313dfde
gnu: r-compquadform: Update to 1.4.3.
* gnu/packages/statistics.scm (r-compquadform): Update to 1.4.3.
2017-04-22 23:30:38 +02:00
Ricardo Wurmus 50d0b2c158
gnu: r-zoo: Update to 1.8-0.
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-0.
2017-04-22 23:30:37 +02:00
Ricardo Wurmus 1c21e2cf17
gnu: r-matrixstats: Update to 0.52.2.
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.52.2.
2017-04-22 23:30:37 +02:00
Ricardo Wurmus c9d200e3af
gnu: r-r-rsp: Update to 0.41.0.
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.41.0.
2017-04-22 23:30:37 +02:00
Ricardo Wurmus 96338a91d5
gnu: r-rtsne: Update to 0.13.
* gnu/packages/statistics.scm (r-rtsne): Update to 0.13.
2017-04-22 23:30:37 +02:00
Ricardo Wurmus 78a237f6b6
gnu: r-rcpparmadillo: Update to 0.7.800.2.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.800.2.0.
2017-04-22 23:30:37 +02:00
Ricardo Wurmus 050d41ca87
gnu: r-memoise: Update to 1.1.0.
* gnu/packages/statistics.scm (r-memoise): Update to 1.1.0.
2017-04-22 23:30:36 +02:00
Ricardo Wurmus aa745eb61f
gnu: r-markdown: Update to 0.8.
* gnu/packages/statistics.scm (r-markdown): Update to 0.8.
2017-04-22 23:30:36 +02:00
Ricardo Wurmus 958d0ee485
gnu: r-assertthat: Update to 0.2.0.
* gnu/packages/statistics.scm (r-assertthat): Update to 0.2.0.
2017-04-22 23:30:36 +02:00
Ricardo Wurmus 2219e691bb
gnu: r-rpart: Update to 4.1-11.
* gnu/packages/statistics.scm (r-rpart): Update to 4.1-11.
2017-04-22 23:30:36 +02:00
Ricardo Wurmus b3360e09a7
gnu: r-mass: Update to 7.3-47.
* gnu/packages/statistics.scm (r-mass): Update to 7.3-47.
2017-04-22 23:30:35 +02:00
Ricardo Wurmus 4d76947e50
gnu: r-boot: Update to 1.3-19.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-19.
2017-04-22 23:30:35 +02:00
Ricardo Wurmus 5ece8321af
gnu: r-curl: Update to 2.5.
* gnu/packages/web.scm (r-curl): Update to 2.5.
2017-04-22 23:30:35 +02:00
Ricardo Wurmus 1a84edeb0b
gnu: r-seqminer: Update to 5.9.
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 5.9.
2017-04-22 23:30:31 +02:00
Ricardo Wurmus f8fe0e9db7
gnu: Add nss-pam-ldapd.
* gnu/packages/openldap.scm (nss-pam-ldapd): New variable.
2017-04-22 23:10:49 +02:00
Manolis Ragkousis cc4faa35f8
gnu: Add the Hurd.
* gnu/packages/hurd.scm (hurd): New variable.
* gnu/packages/patches/hurd-fix-eth-multiplexer-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-04-22 23:01:30 +03:00
Manolis Ragkousis b005a37ac2
gnu: hurd: Add hurd-source-url procedure.
* gnu/packages/hurd.scm (hurd-source-url): New procedure.
  (hurd-headers)[source]: Adjust accordingly.
2017-04-22 23:01:24 +03:00
Danny Milosavljevic 71d0420202
system: Rename operating-system-parameters-file to operating-system-boot-parameters-file.
* gnu/system.scm (operating-system-parameters-file): Rename to ...
(operating-system-boot-parameters-file): ... this.
(operating-system-directory-base-entries): Adapt call site.
2017-04-22 20:54:43 +02:00
Danny Milosavljevic af98d25a12
system: Rename operating-system-kernel-arguments to operating-system-user-kernel-arguments.
* gnu/system.scm (operating-system-kernel-arguments): Rename to ...
(operating-system-user-kernel-arguments): ... this.
(<operating-system>): Adapt accordingly.
(operating-system-bootcfg): Adapt accordingly.
(operating-system-parameters-file): Adapt accordingly.
* gnu/system/vm.scm (system-qemu-image/shared-store-script): Adapt
accordingly.
2017-04-22 20:54:31 +02:00
Tobias Geerinckx-Rice 10b91ccaaa
gnu: weechat: Update to 1.7.1.
* gnu/packages/irc.scm (weechat): Update to 1.7.1.
[source, home-page]: Use HTTPS.
2017-04-22 20:35:50 +02:00
Tobias Geerinckx-Rice d65db1d55d
gnu: weechat: Mention ‘IRC’.
* gnu/packages/irc.scm (weechat)[description]: Mention the search term
‘IRC’, split into paragraphs, and other small tweaks.
2017-04-22 20:35:50 +02:00
Kei Kebreau a7086b154f
gnu: hyperrogue: Update to 9.4g.
* gnu/packages/games.scm (hyperrogue): Update to 9.4g.
2017-04-22 13:57:55 -04:00