* gnu/packages/bioinformatics.scm (python-pysam)[arguments] <check>:
Use (negate proc) instead of (compose not proc).
* guix/import/cran.scm (recursive-import): Likewise.
* guix/import/elpa.scm (filter-dependencies): Use 'remove' instead of
'(filter (compose not proc) ...)'.
Fixes a regression introduced in
a4f5423415.
Reported by Hartmut Goebel.
* guix/build/download.scm (ftp-fetch): Account for the case where
'uri-userinfo' returns #f. Remove the case where it returns "" since
that cannot happen.
This avoids connections to substitute servers for derivations that are
not substitutable anyway, such as profiles.
Reported by Andy Wingo.
* guix/derivations.scm (substitution-oracle): Skip derivations that do
not pass 'substitutable-derivation?'.
* tests/derivations.scm ("substitution-oracle and #:substitute? #f"):
New test.
* guix/ui.scm (package-field-string): New procedure.
(package-description-string): Use it.
(package-synopsis-string): New procedure.
(package->recutils): Use it.
* guix/scripts/lint.scm (check-synopsis-style)[check-texinfo-markup]:
New procedure. Use it in checks.
* tests/lint.scm: Test it.
* gnu/packages/perl.scm (perl-try-tiny)[synopsis]: Adjust for the
Texinfo markup.
* guix/build/download.scm (open-connection-for-uri): Add note about
same-named binding in Guile 2.2.0.
* guix/http-client.scm: Use 'guix:open-connection-for-uri' for the
procedure coming from (guix build download).
* guix/scripts/lint.scm: Likewise.
* guix/scripts/substitute.scm: Likewise.
* guix/scripts/pack.scm (self-contained-tarball): Add #:target.
(docker-image): Add #:target.
[build]: Pass it to 'build-docker-image'.
(%options, show-help): Add '--target'.
(guix-pack): Pass TARGET to 'profile-derivation' and to 'build-image'.
* guix/docker.scm (build-docker-image): Add #:system parameter and honor it.
* doc/guix.texi (Invoking guix pack): Document '--target'.
(Additional Build Options): Refer to the Autoconf manual instead of the
obsolete 'configure.info' for cross-compilation.
* guix/scripts/pack.scm (<compressor>)[package]: Remove.
[command]: Document as being a gexp with an absolute file name.
(%compressors): Adjust accordingly.
(self-contained-tarball): Simplify PATH expression. Move 'string-join'
for the compressor command on the build side.
(docker-image): Simplify PATH expression.
* tests/pack.scm (%gzip-compressor): Adjust accordingly.
* guix/build/cargo-build-system.scm (configure): Remove proprietary
dependencies. Add rust dependencies and configure Cargo to find them.
(build): Also build libraries, not just applications.
(file-sha256): New variable.
(generate-checksums): New variable. Export it.
(touch): New variable.
(install): Generate checksums so Cargo accepts the package.
* guix/gexp.scm (imported-files)[file-pair]: Add case for pairs where
the cdr is not a string.
(imported-modules): Support '=>' syntax in MODULES.
* tests/gexp.scm ("imported-files with file-like objects")
("gexp->derivation & with-imported-module & computed module"): New tests.
* doc/guix.texi (G-Expressions): Document '=>' syntax for
'with-imported-modules'.
Before that, something like:
(call-with-container
(lambda ()
(match (primitive-fork)
…)))
would hang in 'primitive-fork' as the child process (the one started in
the container) would try to pthread_join the finalization thread in
'stop_finalization_thread' in libguile, not knowing that this thread is
nonexistent.
* guix/build/syscalls.scm (%set-automatic-finalization-enabled?!): New
procedure.
(without-automatic-finalization): New macro.
(clone): Wrap PROC call in 'without-automatic-finalization'.
In 2.2, 'fport_close' no longer swallows EBADF and instead raises a
'system-error' for this. This commit adjusts for 2.2.
* guix/zlib.scm (close-procedure): Remove.
(make-gzip-input-port): Use 'port->fdes' instead of 'fileno'.
Use 'gzclose' instead of 'close-procedure'.
(make-gzip-output-port): Likewise.
* tests/zlib.scm ("compression/decompression pipe"): Don't check whether
PARENT is closed using 'port-closed?'. Instead, use 'seek' on the
underlying FD and check for EBADF.
* guix/scripts/pack.scm (self-contained-tarball): Add #:tar option.
[build](tar-supports-sort?): New variable. Use it.
* tests/pack.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
* guix/scripts/pack.scm (<compressor>)[tar-option]: Remove.
[command]: New field.
(%compressors): Provide complete commands. Use '-9' or equivalent for
each compressor; use '-n' for gzip.
(self-contained-tarball)[build]: Adjust accordingly.
* guix/scripts/pack.scm (self-contained-tarball): Add #:localstatedir?
parameter and honor it.
(%options, show-help): Add '--localstatedir'.
(guix-pack): Honor it.
* gnu/build/install.scm (populate-single-profile-directory): Add
#:register? parameter and honor it.
* doc/guix.texi (Binary Installation): Use '--localstatedir' in
example.
(Invoking guix pack): Document it.
* guix/build/syscalls.scm (define-bits): Do not define NAMES... as
top-level variables since that prevents literal matches in 2.2.
Instead, determine constant values at expansion time.
Fixes a regression introduced in 7447aa36e1.
Reported by Ricardo Wurmus.
* guix/utils.scm: Revert 7447aa36e1. Use
#:prefix for (ice-9 iconv) to support both 2.0 and 2.2.
In Guile 2.2, (rnrs io ports) exports 'bytevector->string', which
conflicts with that of (ice-9 iconv).
* guix/utils.scm: Hide 'bytevector->string' from (rnrs io ports).
* guix/ui.scm (right-arrow): Call 'set-port-encoding!' to set PORT's
encoding; remove use of 'with-fluids'. This is for compatibility with
Guile 2.2 where the encoding of string ports is not influenced by
%DEFAULT-PORT-ENCODING.
* tests/ui.scm ("show-manifest-transaction"): Likewise.
* guix/ui.scm (fill-paragraph): Don't use '_' as a pattern variable
since that is shadowed by the top-level '_' binding on Guile 2.2.
(show-manifest-transaction): Likewise.
Fixes <http://bugs.gnu.org/25775>.
Reported by Sirgazil, Ricardo Wurmus, Andy Wingo, and others.
* guix/download.scm (in-band-download): Always use GUILE. This reverts
9f05908fb1.
* gnu/packages/bash.scm (url-fetch/reset-patch-level): Remove #:guile.
Pass %BOOTSTRAP-GUILE as #:guile to 'url-fetch'. Remove #:guile-for-build
argument in 'gexp->derivation' call.
In glibc-2.25 a dependency on "linux/falloc.h" was added.
This also reverts commit 8f8f250bdc
which is no longer needed. This commit was not compatible with
the glibc version Hurd is using. See
<https://lists.gnu.org/archive/html/guix-devel/2017-02/msg01046.html>
* guix/build/make-bootstrap.scm (make-stripped-libc): Copy "falloc.h"
to the new system.
* gnu/packages/patches/glibc-bootstrap-system.patch: Remove part
that touches fcntl-linux.h.
Problem reported by Andreas Enge <andreas@enge.fr>.
Fixes <http://bugs.gnu.org/25775>.
* guix/download.scm (in-band-download): Use %bootstrap-guile as a
fall-back when using older daemons that do not have a built-in
downloader.
Written-by: Ricardo Wurmus <rekado@elephly.net>
It doesn't make sense to run non-test executables (which is what "dub run"
would do).
The "check" function already invokes "dub test" and that's enough.
* guix/build/dub-build-system.scm (build): Remove "dub run" invocation.
Fixes <https://bugs.gnu.org/25635>.
Reported by Sergei Trofimovich <slyfox@inbox.ru>.
* guix/import/pypi.scm (guix-package->pypi-name)[url->pypi-name]: New
procedure.
Rewrite body to match lists in addition to strings.
* tests/pypi.scm ("guix-package->pypi-name, several URLs"): New test.
Gtk+3 now have multiple outputs, so the gtk-query-immodules-3.0 should be find
in output "bin" instead of "out".
* guix/profiles.scm (gtk-im-modules): Pass the path of gtk-query-immodules-x.x
as 'query' argument to the 'build' procedure.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* guix/download.scm (url-fetch/tarbomb): Fall back to ‘file-name’ if
‘name’ is #f, like the regular ‘url-fetch’ does.
* gnu/packages/bioinformatics.scm (muscle)[source]: Remove ‘file-name’.
* gnu/packages/engineering.scm (fastcap)[source]: Likewise.
* gnu/packages/scheme.scm (scmutils)[source]: Likewise.
* guix/scripts/environment.scm (launch-environment/container): Include the
file name in the call to string=? when deciding if the file should be
writable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* guix/serialization.scm (write-bytevector): New procedure.
(write-string): Rewrite in terms of 'write-bytevector'.
* guix/store.scm (write-arg): Add 'bytevector' case.
(add-data-to-store): New procedure, from former 'add-text-to-store'.
(add-text-to-store): Rewrite in terms of 'add-data-to-store'.
* tests/store.scm ("add-data-to-store"): New test.
* guix/build-system/python.scm (package-with-explicit-python): Use
'mlambdaq' instead of 'mlambda'. This does not change the <package>
graph and has no visible impact on performance.
* guix/packages.scm (package-upstream-name): New procedure.
* guix/gnu-maintenance.scm (gnu-package?, ftp-server/directory)
(latest-release*, latest-gnome-release)
(latest-kde-release): Use it instead of the inline expression.
* gnu/build/activation.scm (make-file-writable): Move this to ...
* guix/build/utils.scm (make-file-writable): ... here. Export it.
* guix/build/gnu-build-system.scm (strip): Use it.
Ludovic Courtès