Commit Graph

3740 Commits (e32316e62f54bbda07e88f22d97fc28b84eb70b8)

Author SHA1 Message Date
Mark H Weaver aad8877d91 gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to dd3a42e.
2015-04-21 21:30:23 -04:00
Mark H Weaver f1a7fd7029 gnu: libxfont: Update to 1.5.1.
* gnu/packages/xorg.scm (libxfont): Update to 1.5.1.
2015-04-21 19:11:24 -04:00
Mark H Weaver dd3a42e624 gnu: guix: Don't install in /etc/bash_completion.d within build environment.
Fixes <http://bugs.gnu.org/20394>.
Patch by Ludovic Courtès <ludo@gnu.org>.

* gnu/packages/package-management.scm (guix)[arguments]: Pass
  "--with-bash-completion-dir" option to configure.
2015-04-21 19:04:34 -04:00
Mark H Weaver d8d6d096be gnu: tzdata: Update to 2015c.
* gnu/packages/base.scm (tzdata): Update to 2015c.
2015-04-21 19:03:25 -04:00
Andreas Enge 30536f2c8b gnu: libidn: Update to 1.30.
* gnu/packages/libidn.scm (libidn): Update to 1.30.
2015-04-21 18:57:28 -04:00
Mark H Weaver 54b76b60d9 Revert "gnu: libidn: Update to 1.30."
This reverts commit 8462a03f28.
2015-04-21 17:47:34 -04:00
Andreas Enge 8462a03f28 gnu: libidn: Update to 1.30.
* gnu/packages/libidn.scm (libidn): Update to 1.30.
2015-04-21 22:59:50 +02:00
Andreas Enge 8185519dba gnu: ocrad: Update to 0.25.
* gnu/packages/ocr.scm (ocrad): Update to 0.25.
2015-04-21 22:57:29 +02:00
Ludovic Courtès 6162b95d21 gnu: glibc: Add dependency on Gettext, to install the message catalogs.
This fixes a bug whereby the libc.mo files were not installed, and thus
translations of libc's messages were not available.

* gnu/packages/commencement.scm (gettext-boot0): New variable.
  (glibc-final)[native-inputs]: New field.
* gnu/packages/base.scm (glibc)[native-inputs]: Add GNU-GETTEXT.
2015-04-21 22:53:09 +02:00
Ricardo Wurmus 6260d1a869 gnu: Add TuxGuitar.
* gnu/packages/music.scm (tuxguitar): New variable.
2015-04-21 21:51:38 +02:00
Ricardo Wurmus 8581c81307 gnu: Add SWT.
* gnu/packages/java.scm (swt): New variable.
2015-04-21 21:51:38 +02:00
Ludovic Courtès ef593a103d gnu: libltdl: Remove unneeded patch.
* gnu/packages/autotools.scm (libltdl)[source]: Remove 'patches'.
2015-04-21 21:16:24 +02:00
Ludovic Courtès 4a2b74bf4c gnu: ld-wrapper: Ignore the .so argument following '-dynamic-linker'.
Reported at <http://bugs.gnu.org/20102>.

* gnu/packages/ld-wrapper.in (library-files-linked): Rename 'path+files'
  to 'path+files+args'.  Thread the reverse list of previous arguments.
  Add case for when the previous argument is "-dynamic-linker".
2015-04-21 21:14:28 +02:00
Ludovic Courtès 4267c637d6 gnu: ld-wrapper: Add debugging info.
* gnu/packages/ld-wrapper.in (ld-wrapper): Add "libraries linked"
  debugging statement.
2015-04-21 21:08:44 +02:00
Ludovic Courtès cbbb11c8a0 gnu: Rename ld-wrapper2 to ld-wrapper.
* gnu/packages/ld-wrapper2.in: Rename to...
* gnu/packages/ld-wrapper.in: ... this.
* gnu-system.am (MISC_DISTRO_FILES): Remove ld-wrapper2.in.
* gnu/packages/commencement.scm (fixed-ld-wrapper): Remove.
  (gcc-toolchain): Restore pre-77db91ad inputs.
2015-04-21 21:07:11 +02:00
Ricardo Wurmus e4e5a4d88f gnu: Add eXpress.
* gnu/packages/bioinformatics.scm (express): New variable.
2015-04-21 17:57:22 +02:00
Ricardo Wurmus 9794180d5e gnu: Add bamtools.
* gnu/packages/bioinformatics.scm (bamtools): New variable.
2015-04-21 17:57:22 +02:00
Ricardo Wurmus dbf4ed7c91 gnu: Add subread.
* gnu/packages/bioinformatics.scm (subread): New variable.
2015-04-21 10:46:23 +02:00
Ludovic Courtès 38cf2ba084 gnu: Remove all #:select from (gnu packages ...) modules.
This works around Guile bug <http://bugs.gnu.org/15540>.
Reported by Andreas Enge <andreas@enge.fr>.

* gnu/packages/engineering.scm: Don't #:select from (gnu packages ...).
* gnu/packages/gcc.scm: Likewise.
* gnu/packages/package-management.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/pulseaudio.scm: Likewise.
* gnu/packages/moe.scm: Likewise, and #:select from (guix licenses)
  instead.
2015-04-20 15:50:59 +02:00
Ricardo Wurmus 51c649992e gnu: Add sra-tools.
* gnu/packages/bioinformatics.scm (sra-tools): New variable.
2015-04-20 15:29:17 +02:00
Ricardo Wurmus 75dd242480 gnu: Add NCBI VDB.
* gnu/packages/bioinformatics.scm (ncbi-vdb): New variable.
2015-04-20 15:29:17 +02:00
Ricardo Wurmus 2651a5e695 gnu: Add NGS Java bindings.
* gnu/packages/bioinformatics.scm (ngs-java): New variable.
2015-04-20 15:29:16 +02:00
Ricardo Wurmus 282c5087b4 gnu: Add NGS SDK.
* gnu/packages/bioinformatics.scm (ngs-sdk): New variable.
2015-04-20 15:28:58 +02:00
Ricardo Wurmus 85c37e29a4 gnu: Add Biopython.
* gnu/packages/bioinformatics.scm (python-biopython, python2-biopython): New
  variables.
2015-04-20 15:23:23 +02:00
Eric Bavier 40b084a326 gnu: Adjust latest perl modules to new 'modify-phases' syntax.
* gnu/packages/compression.scm (perl-compress-raw-zlib)[arguments]:
  Add missing quotes, as needed since commit f8503e2.
* gnu/packages/perl.scm (perl-ipc-run)[arguments]: Likewise.
* gnu/packages/xml.scm (perl-xml-sax)[arguments]: Likewise.
2015-04-19 21:39:32 -05:00
宋文武 61c21ad319 gnu: Add WebKitGTK+.
* gnu/packages/webkit.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-04-20 10:34:24 +08:00
Eric Bavier 97b05abe6d gnu: Add JSON-Any.
* gnu/packages/perl.scm (perl-json-any): New variable.
2015-04-19 19:48:52 -05:00
Eric Bavier ae6904dc0b gnu: nix: Propagate perl inputs.
* gnu/packages/package-management.scm (nix)[inputs]: Move
  perl-www-curl, perl-dbi, perl-dbd-sqlite to...
  [propagated-inputs]: ...this new field
2015-04-19 19:48:52 -05:00
Eric Bavier 8ac84f230c gnu: Add Sys-Hostname-Long.
* gnu/packages/perl.scm (perl-sys-hostname-long): New variable.
2015-04-19 19:48:52 -05:00
Eric Bavier 10ef803e7d gnu: Add Text-Table.
* gnu/packages/perl.scm (perl-text-table): New variable.
2015-04-19 19:48:52 -05:00
Eric Bavier 7ae9557181 gnu: Add Text-Aligner.
* gnu/packages/perl.scm (perl-text-aligner): New variable.
2015-04-19 19:48:52 -05:00
Eric Bavier f21671f469 gnu: Add Set-Scalar.
* gnu/packages/perl.scm (perl-set-scalar): New variable.
2015-04-19 19:48:52 -05:00
Eric Bavier b4dcb026d6 gnu: Add SQL-SplitStatement.
* gnu/packages/databases.scm (perl-sql-splitstatement): New variable.
2015-04-19 19:48:52 -05:00
Eric Bavier 718c89c1a1 gnu: Add SQL-Tokenizer.
* gnu/packages/databases.scm (perl-sql-tokenizer): New variable.
2015-04-19 19:48:52 -05:00
Eric Bavier 8ce2312875 gnu: Add Perl Readonly.
* gnu/packages/perl.scm (perl-readonly): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 38e62c81ee gnu: Add Perl Net-Amazon-S3.
* gnu/packages/patches/perl-net-amazon-s3-moose-warning.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/web.scm (perl-net-amazon-s3): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 3dd6bee1f2 gnu: Add XML-LibXML.
* gnu/packages/xml.scm (perl-xml-libxml): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 18b8bbb304 gnu: Add XML-SAX;
* gnu/packages/xml.scm (perl-xml-sax): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 1ed6d5bc86 gnu: Add XML-SAX-Base.
* gnu/packages/xml.scm (perl-xml-sax-base): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier b715dbac7b gnu: Add XML-NamespaceSupport.
* gnu/packages/xml.scm (perl-xml-namespacesupport): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 0955342bf7 gnu: Add Term-ProgressBar-Simple.
* gnu/packages/perl.scm (perl-term-progressbar-simple): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 0d54bd259c gnu: Add Term-ProgressBar-Quiet.
* gnu/packages/perl.scm (perl-term-progressbar-quiet): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 4dbac597eb gnu: Add Test-MockObject.
* gnu/packages/perl.scm (perl-test-mockobject): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 7332618df3 gnu: Add UNIVERSAL-isa.
* gnu/packages/perl.scm (perl-universal-isa): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier f9671ab689 gnu: Add UNIVERSAL-can.
* gnu/packages/perl.scm (perl-universal-can): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier cc307bda85 gnu: Add Term-ProgressBar.
* gnu/packages/perl.scm (perl-term-progressbar): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 70fe0008f7 gnu: Add TermReadKey.
* gnu/packages/perl.scm (perl-term-readkey): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier cd718b8201 gnu: Add Class-MethodMaker.
* gnu/packages/perl.scm (perl-class-methodmaker): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 56da2a1abd gnu: Add IO-Interactive.
* gnu/packages/perl.scm (perl-io-interactive): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 257fa40b23 gnu: Add Term-Encoding.
* gnu/packages/perl.scm (perl-term-encoding): New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier d2401db9ff gnu: Add MooseX-Types-DateTime-MoreCoercions.
* gnu/packages/perl.scm (perl-moosex-types-datetime-morecoercions):
  New variable.
2015-04-19 19:48:51 -05:00
Eric Bavier 4f43da182b gnu: Add Time-Duration-Parse.
* gnu/packages/perl.scm (perl-time-duration-parse): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier a15145d93b gnu: Add Time-Duration.
* gnu/packages/perl.scm (perl-time-duration): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier bbe81cc0dd gnu: Add Test-Pod-Coverage.
* gnu/packages/perl.scm (perl-test-pod-coverage): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 29fda459a6 gnu: Add Pod-Coverage.
* gnu/packages/perl.scm (perl-pod-coverage): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 7300092693 gnu: Add Devel-Symdump.
* gnu/packages/perl.scm (perl-devel-symdump): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 3e7a86cdc5 gnu: Add MooseX-Types-DateTime.
* gnu/packages/perl.scm (perl-moosex-types-datetime): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier ef96132220 gnu: Add DateTimeX-Easy.
* gnu/packages/perl.scm (perl-datetimex-easy): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 69d2261f77 gnu: Add DateTime-Format-Natural.
* gnu/packages/perl.scm (perl-datetime-format-natural): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 55069500a2 gnu: Add Module-Util.
* gnu/packages/perl.scm (perl-module-util): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 59f423214e gnu: Add Date-Calc.
* gnu/packages/perl.scm (perl-date-calc, perl-date-calc-xs): New
  variables.
2015-04-19 19:48:50 -05:00
Eric Bavier bb90ae0cb0 gnu: Add Bit-Vector.
* gnu/packages/perl.scm (perl-bit-vector): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 85690ec144 gnu: Add Perl boolean.
* gnu/packages/perl.scm (perl-boolean): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier e58a2fa16e gnu: Add DateTime-Format-ICal.
* gnu/packages/perl.scm (perl-datetime-format-ical): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 21c9adcca6 gnu: Add DateTime-Event-ICal.
* gnu/packages/perl.scm (perl-datetime-event-ical): New variable.
2015-04-19 19:48:50 -05:00
Eric Bavier 47e049c446 gnu: Add DateTime-Event-Recurrence.
* gnu/packages/perl.scm (perl-datetime-event-recurrence): New
  variable.
2015-04-19 19:48:50 -05:00
Eric Bavier f89fe3bff7 gnu: Add DateTime-Set.
* gnu/packages/perl.scm (perl-datetime-set): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 23c2836041 gnu: Add Set-Infinite.
* gnu/packages/perl.scm (perl-set-infinite): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier b271f727f0 gnu: Add DateTime-Format-Flexible.
* gnu/packages/perl.scm (perl-datetime-format-flexible): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 3dcfec09c3 gnu: Add DateTime-Format-Builder.
* gnu/packages/perl.scm (perl-datetime-format-builder): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 6f170fe596 gnu: Add DateTime-Format-Strptime.
* gnu/packages/perl.scm (perl-datetime-format-strptime): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier bd44b05dca gnu: Add Class-Factory-Util.
* gnu/packages/perl.scm (perl-class-factory-util): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 4be514cb47 gnu: Add MooseX-StrictConstructor.
* gnu/packages/perl.scm (perl-moosex-strictconstructor): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 6a58b09280 gnu: Add LWP-UserAgent-Determined.
* gnu/packages/web.scm (perl-lwp-useragent-determined): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 0a24e9b887 gnu: Add Digest-MD5-File.
* gnu/packages/web.scm (perl-digest-md5-file): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 31170d1390 gnu: Add Digest-HMAC.
* gnu/packages/perl.scm (perl-digest-hmac): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 9151712c55 gnu: Add DateTime-Format-HTTP.
* gnu/packages/web.scm (perl-datetime-format-http): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier 1cebf8736e gnu: Add Data-Stream-Bulk.
* gnu/packages/perl.scm (perl-data-stream-bulk): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier bdcfd18e4b gnu: Add LWP-Protocol-https.
* gnu/packages/web.scm (perl-lwp-protocol-https): New variable.
2015-04-19 19:48:49 -05:00
Eric Bavier bec820d94a gnu: libwww-perl: Update to 6.13.
* gnu/packages/web.scm (perl-libwww)[version]: Update to 6.13.
  [source]: Adjust uri.
  [home-page]: Point to generic distribution page.
2015-04-19 19:48:49 -05:00
Eric Bavier 0eb3b5bdf1 gnu: Net-HTTP: Update to 6.07.
* gnu/packages/web.scm (perl-net-http)[version]: Update to 6.07.
  [source]: Adjust uri.
  [propagated-inputs]: New field.
  [home-page]: Point to generic distribution page.
2015-04-19 19:48:49 -05:00
Eric Bavier e3d84c4e3a gnu: Add IPC-Run.
* gnu/packages/perl.scm (perl-ipc-run): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 8aaafd34c8 gnu: Add IO-Compress.
* gnu/packages/compression.scm (perl-io-compress): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 8e18514a69 gnu: Add Compress-Raw-Zlib.
* gnu/packages/compression.scm (perl-compress-raw-zlib): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 73f542c368 gnu: Add Compress-Raw-Bzip2.
* gnu/packages/compression.scm (perl-compress-raw-bzip2): New
  variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 38973df746 gnu: Add File-Slurp.
* gnu/packages/perl.scm (perl-file-slurp): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier a24c54201d gnu: Add Email-Sender.
* gnu/packages/mail.scm (perl-email-sender): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 0677b1af3b gnu: Add Throwable.
* gnu/packages/perl.scm (perl-throwable): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 70de16eaf4 gnu: Add MooX-Types-MooseLike.
* gnu/packages/perl.scm (perl-moox-types-mooselike): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 26b8de1963 gnu: Add Email-Abstract.
* gnu/packages/mail.scm (perl-email-abstract): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 0a4c49f613 gnu: Add Email-MIME.
* gnu/packages/mail.scm (perl-email-mime): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 151ef3edc3 gnu: Add Email-Simple.
* gnu/packages/mail.scm (perl-email-simple): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier aa86a3be20 gnu: Add Email-Date-Format.
* gnu/packages/mail.scm (perl-email-date-format): New variable.
2015-04-19 19:48:48 -05:00
Eric Bavier 02e2993607 gnu: Add Email-MIME-Encodings.
* gnu/packages/mail.scm (perl-email-mime-encodings): New variable.
2015-04-19 19:48:47 -05:00
Eric Bavier 55025bb516 gnu: Add Email-MIME-ContentType.
* gnu/packages/mail.scm (perl-email-mime-contenttype): New variable.
2015-04-19 19:48:47 -05:00
Eric Bavier 08bf70953f gnu: Add Email-MessageID.
* gnu/packages/mail.scm (perl-email-messageid): New variable.
2015-04-19 19:48:47 -05:00
Eric Bavier ebda902fb5 gnu: Add Email-Address.
* gnu/packages/mail.scm (perl-email-address): New variable.
2015-04-19 19:48:47 -05:00
Eric Bavier e3cfe3d6d1 gnu: Move perl-mime-types to (gnu packages perl).
* gnu/packages/web.scm (perl-mime-types): Move this...
* gnu/packages/perl.scm (perl-mime-types): ... to here.
2015-04-19 19:48:47 -05:00
Eric Bavier 186eb13248 gnu: add DBD-Pg.
* gnu/packages/databases.scm (perl-dbd-pg): New variable.
2015-04-19 19:48:47 -05:00
Eric Bavier 19c0e5a728 gnu: Add Crypt-RandPasswd.
* gnu/packages/perl.scm (perl-crypt-randpasswd): New variable.
2015-04-19 19:48:47 -05:00