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39420 Commits

Author SHA1 Message Date
Efraim Flashner ec3f88af7e
gnu: npth: Add updater properties. 
* gnu/packages/gnupg.scm (npth)[properties]: New field. Add ftp-server,
ftp-directory.
 2019-07-10 11:39:09 +03:00
Efraim Flashner ee755b702f
gnu: gpa: Update to 0.10.0. 
* gnu/packages/gnupg.scm (gpa): Update to 0.10.0.
 2019-07-10 11:06:32 +03:00
Efraim Flashner 9a451a6740
gnu: gpa: Add updater properties. 
* gnu/packages/gnupg.scm (gpa)[properties]: New field, add ftp-server,
ftp-directory.
 2019-07-10 11:06:31 +03:00
Efraim Flashner 2d775ed2d6
gnu: postgresql@9: Update to 9.6.14 [fixes CVE-2018-1058, CVE-2019-9193] 
* gnu/packages/databases.scm (postgresql@9): Update to 9.6.14.
 2019-07-10 11:06:15 +03:00
Efraim Flashner e5b810f755
gnu: gnupg: Update to 2.2.17. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.17.
 2019-07-10 09:56:08 +03:00
Mark H Weaver 6c83c48391
gnu: icecat: Update to 60.8.0-guix1 [security fixes]. 
Includes fixes for CVE-2019-9811, CVE-2019-11709, CVE-2019-11711,
CVE-2019-11712, CVE-2019-11713, CVE-2019-11715, CVE-2019-11717,
CVE-2019-11719, CVE-2019-11729, and CVE-2019-11730.

* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.8.0-guix1.
(icecat-source)[upstream-firefox-source]: Update hash.
(icecat): Refresh some stale comments.
 2019-07-09 19:31:36 -04:00
Marius Bakke 760d90cc6a
gnu: ungoogled-chromium: Increase build timeout. 
* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Set TIMEOUT to
40 hours.
 2019-07-10 00:54:29 +02:00
Tobias Geerinckx-Rice 12b1ec6617
gnu: iproute2: Update to 5.2.0. 
* gnu/packages/linux.scm (iproute): Update to 5.2.0.
 2019-07-09 23:08:50 +02:00
Oleg Pykhalov 38a9b4b74e
gnu: python-internetarchive: Update to 1.8.5. 
* gnu/packages/web.scm (python-internetarchive)[version]: Update to 1.8.5.
[source](modules, snippet): New fields.
 2019-07-09 20:41:14 +03:00
Efraim Flashner 710f027765
gnu: wgetpaste: Update to 2.29. 
* gnu/packages/wget.scm (wgetpaste): Update to 2.29.
[arguments]: Replace default paste service. Install license file.
 2019-07-09 16:52:59 +03:00
Oleg Pykhalov 534ceb7de1
gnu: emacs-stumpwm-mode: Update to 0.0.1-1.8fbe071. 
* gnu/packages/emacs-xyz.scm (emacs-stumpwm-mode): Update to 0.0.1-1.8fbe071.
 2019-07-09 14:42:22 +03:00
Tobias Geerinckx-Rice 48182cff03
gnu: r-biocinstaller: Remove entirely. 
This follows up on commit 0971f8bd88,
which led to ‘r-biocmanager: unbound variable’ errors.  See
<https://lists.gnu.org/archive/html/guix-devel/2019-07/msg00120.html>.

* gnu/packages/bioinformatics.scm (r-biocinstaller): Remove variable.
 2019-07-09 13:26:26 +02:00
Hartmut Goebel 582de58c69
gnu: Add anonip. 
* gnu/packages/web.scm (anonip): New variable.
 2019-07-09 13:20:36 +02:00
Nicolas Goaziou 3c2bbbb0ff
gnu: snap: Update to 5.0.1. 
* gnu/packages/education.scm (snap): Update to 5.0.1.
 2019-07-09 09:13:43 +02:00
Nicolas Goaziou 032ca4baa7
gnu: musescore: Update to 3.2.3. 
* gnu/packages/music.scm (musescore): Update to 3.2.3.
 2019-07-09 09:02:50 +02:00
Tobias Geerinckx-Rice 3fd3dd33cb
gnu: libmicrohttpd: Update to 0.9.65. 
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.65.
 2019-07-09 04:48:02 +02:00
Tobias Geerinckx-Rice 35014c402d
gnu: grub: Build ‘grub-mount’. 
This increases the closure size by a mere 1.8 MiB (0.8%).

* gnu/packages/bootloaders.scm (grub)[inputs]: Add fuse.
 2019-07-09 01:43:31 +02:00
Tobias Geerinckx-Rice 069ab3bbfd
gnu: grub: Update to 2.04. 
* gnu/packages/bootloaders.scm (grub): Update to 2.04.
[source]: Remove upstreamed patches.
[arguments]: Don't require Python.  Add a ‘disable-pixel-perfect-test’
phase to skip tests that fail with with our newer Unifont.
* gnu/packages/patches/grub-efi-fat-serial-number.patch: Adjust context.
* gnu/packages/patches/grub-binutils-compat.patch,
gnu/packages/patches/grub-check-error-efibootmgr.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2019-07-09 01:28:11 +02:00
Tobias Geerinckx-Rice 0971f8bd88
gnu: Remove r-biocinstaller. 
It requires R < 3.6 and is no longer supported.

* gnu/packages/bioinformatics.scm (r-biocinstaller): Define as
deprecated in favour of r-biocmanager.
 2019-07-08 16:13:11 +02:00
Tobias Geerinckx-Rice 1042e3481d
gnu: r-xbioc: Update to 0.1.16-1.6ff0670. 
This is needed to deprecate r-biocinstaller, which is no longer
distributed.

* gnu/packages/bioinformatics.scm (r-xbioc): Update to 0.1.16-1.6ff0670.
[propagated-inputs]: Replace deprecated r-biocinstaller with
r-biocmanager.
 2019-07-08 16:11:55 +02:00
Tobias Geerinckx-Rice ddfb62807d
gnu: cmh: Fix build. 
This follows up on commit 1de48e8f8a.

* gnu/packages/algebra.scm (fplll-4-cmh): New variable.
(cmh)[inputs]: Use it.
 2019-07-08 15:48:07 +02:00
Tobias Geerinckx-Rice 69e3512b7c
gnu: libomp: Download over HTTPS. 
* gnu/packages/llvm.scm (libomp)[source]: Use HTTPS.
 2019-07-08 15:33:35 +02:00
Tobias Geerinckx-Rice e2170c3192
gnu: libomp: Fix source hash. 
This is a follow-up to commit c5296e205b,
which updated llvm.

* gnu/packages/llvm.scm (libomp)[source]: Fix hash.
 2019-07-08 15:33:35 +02:00
Tobias Geerinckx-Rice 61242625ad
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.4.7. 
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Update to 3.4.7.
 2019-07-08 15:33:35 +02:00
Joseph LaFreniere 377b0501c4
gnu: Add emacs-polymode-org. 
* gnu/packages/emacs-xyz.scm (emacs-polymode-org): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-08 13:05:56 +02:00
Joseph LaFreniere 85630d8042
gnu: emacs-polymode: Update to 0.2. 
* gnu/packages/emacs-xyz.scm (emacs-polymode): Update to 0.2.
[source]: Change URL of Git repository to Polymode GitHub project.
[homepage]: Change URL to polymode GitHub project.
[description]: Realign text.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-08 13:05:56 +02:00
ison 88a29b5cd3
gnu: i3blocks: Update to ec050e7. 
* gnu/packages/wm.scm (i3blocks): Update to ec050e7.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-08 13:05:56 +02:00
Pierre Langlois a55dd25d3e
gnu: dosfstools: Enable compat symlinks. 
Enable compatibility symlinks to provide commands such as `mkfs.vfat`.

* gnu/packages/disk.scm (dosfstools)[arguments]: Pass
"--enable-compat-symlinks" to configure.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-08 13:05:56 +02:00
Pierre Langlois b9a1d74de5
gnu: wireservice: New wireservice-package macro. 
Replace the parent 'base-package' variable with a 'wireservice-package' macro
that includes all common package fields.

* gnu/packages/wireservice.scm (base-package): Delete.
(wireservice-package): New macro.
(python-leather, python-agate, python-agate-sql, python-agate-dbf,
python-agate-excel): Use wireservice-package.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-08 13:05:55 +02:00
Efraim Flashner c7b757c46c
gnu: gama: Update to 2.06. 
* gnu/packages/gps.scm (gama): Update to 2.06.
 2019-07-08 10:38:23 +03:00
Vagrant Cascadian d335ef51d7
gnu: diffoscope: Update to 116. 
* gnu/packages/package-management (diffoscope): Update to 116.
 2019-07-07 18:57:28 -07:00
Pierre Langlois bf187d92e3
gnu: Add csvkit. 
* gnu/packages/wireservice.scm (csvkit): New variable.
* gnu/packages/patches/csvkit-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois 213b05f04e
gnu: Add python-agate-excel. 
* gnu/packages/wireservice.scm (python-agate-excel): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois f1122a2c91
gnu: Add python-agate-dbf. 
* gnu/packages/wireservice.scm (python-agate-dbf): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois 9b2850c845
gnu: Add python-agate-sql. 
* gnu/packages/wireservice.scm (python-agate-sql): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois dc835e75ce
gnu: Add python-agate. 
* gnu/packages/wireservice.scm (python-agate): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois 451742bcf6
gnu: Add python-leather. 
* gnu/packages/wireservice.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois edeb04bfb7
gnu: Add python-dbfread. 
* gnu/packages/python-xyz.scm (python-dbfread): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois 450d5dc289
gnu: Add python-crate. 
* gnu/packages/databases.scm (python-crate): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:20 +02:00
Pierre Langlois 0d5b7ea11f
gnu: Add python-pytimeparse. 
* gnu/packages/time.scm (python-pytimeparse): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:19 +02:00
Pierre Langlois 6543bc80b4
gnu: Add python-slugify. 
* gnu/packages/python-web.scm (python-slugify): New variable.
* gnu/packages/patches/python-slugify-depend-on-unidecode.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:19 +02:00
Brian Leung e41ba8606f
gnu: Add emacs-moe-theme-el. 
* gnu/packages/emacs-xyz.scm (emacs-moe-theme-el): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:19 +02:00
Brian Leung ae429e48d1
gnu: emacs-goto-chg: Update to 1.7.3-1.1829a13. 
* gnu/packages/emacs-xyz.scm (emacs-goto-chg): Update to 1.7.3-1.1829a13.
[origin]: Use GIT-FETCH and GIT-REFERENCE.
[home-page]: Update.
[inputs]: Add emacs-undo-tree.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:19 +02:00
Brian Leung 81d1baafdb
gnu: emacs-hydra: Update to 0.15.0. 
* gnu/packages/emacs-xyz.scm (emacs-hydra): Update to 0.15.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:19 +02:00
Brian Leung b453637f1b
gnu: Add emacs-lpy. 
* gnu/packages/emacs-xyz.scm (emacs-lpy): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:19 +02:00
Brian Leung 55a0b2a08d
gnu: emacs-md4rd: Update to 0.3.1. 
* gnu/packages/emacs-xyz.scm (emacs-md4rd): Update to 0.3.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:19 +02:00
Brian Leung 26150eac73
gnu: emacs-zoutline: Update to 0.2.0. 
* gnu/packages/emacs-xyz.scm (emacs-zoutline): Update to 0.2.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:18 +02:00
Brian Leung 9f6dca4de3
gnu: emacs-restclient: Update to 0-2.422ee8d. 
* gnu/packages/emacs-xyz.scm (emacs-restclient): Update to 0-2.422ee8d.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:18 +02:00
Brian Leung fa71034115
gnu: emacs-disk-usage: Don't use unstable tarball. 
* gnu/packages/emacs-xyz.scm (emacs-disk-usage)[source]: Use GIT-FETCH and GIT-FILE-NAME.
[home-page] Move to usual location.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:18 +02:00
Brian Leung 8330715878
gnu: emacs-fish-completion: Don't use unstable tarball. 
* gnu/packages/emacs-xyz.scm (emacs-fish-completion)[source]: Use GIT-FETCH
  and GIT-FILE-NAME.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-07 15:48:18 +02:00