f07e53fb53
gnu: gflags: Update to 2.2.0.
...
* gnu/packages/popt.scm (gflags): Update to 2.2.0.
[source]: Use tarball release.
2017-01-21 12:44:42 +01:00
c0dee46c85
gnu: r-vegan: Update to 2.4-2.
...
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-2.
2017-01-21 18:17:16 +10:00
cda0f9a4a9
gnu: diamond: Update to 0.8.34.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.34.
2017-01-21 17:28:11 +10:00
5aa0932eaf
gnu: linux-libre: Update to 4.9.5.
...
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.5.
2017-01-20 21:56:02 -05:00
523fe6a3ab
gnu: linux-libre@4.4: Update to 4.4.44.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.44.
2017-01-20 21:54:47 -05:00
13c0eccbbb
gnu: linux-libre@4.1: Update to 4.1.38.
...
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.38.
2017-01-20 21:48:43 -05:00
079f013be2
gnu: gnutls: Add 'guile2.2-gnutls'.
...
Suggested by Chris Webber.
* gnu/packages/tls.scm (gnutls/guile-2.2): New variable.
2017-01-20 21:39:17 +01:00
7386a0481c
gnu: Add fcitx-configtool.
...
* gnu/packages/fcitx.scm (fcitx-configtool): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-01-20 19:35:47 +01:00
ff99fe6505
gnu: datamash: Update to 1.1.1.
...
* gnu/packages/datamash.scm (datamash): Update to 1.1.1.
2017-01-20 19:35:47 +01:00
53b8ee2881
gnu: gd: Fix source URL.
...
This is a followup to 3f0603ea65
2017-01-20 19:35:46 +01:00
3f0603ea65
gnu: gd: Replace with gd-2.2.4 [fixes CVE-2016-{6912,9317} and others].
...
'CHANGELOG.md' in the development repository lists several fixed bugs with
potential security implications:
https://github.com/libgd/libgd/blob/gd-2.2.4/CHANGELOG.md
* gnu/packages/gd.scm (gd)[replacement]: New field.
(gd-2.2.4): New variable.
2017-01-20 10:30:08 -05:00
2923f3e5b9
gnu: r-msnid: Expand abbreviation in description.
...
* gnu/packages/bioinformatics.scm (r-msnid)[description]: Expand "MS/MS"
to "tandem mass spectrometry".
2017-01-20 15:38:03 +01:00
e614d6398a
gnu: r-msnbase: Expand abbreviation in description.
...
* gnu/packages/bioinformatics.scm (r-msnbase)[description]: Expand "MS"
to "mass spectrometry".
2017-01-20 15:38:03 +01:00
e431eb670d
gnu: Add r-fastica.
...
* gnu/packages/statistics.scm (r-fastica): New variable.
2017-01-20 15:38:03 +01:00
793f2edbbc
gnu: Add r-lars.
...
* gnu/packages/statistics.scm (r-lars): New variable.
2017-01-20 15:38:03 +01:00
efba686c80
gnu: Add r-mixtools.
...
* gnu/packages/statistics.scm (r-mixtools): New variable.
2017-01-20 15:38:03 +01:00
c6017f7222
gnu: Add r-cowplot.
...
* gnu/packages/statistics.scm (r-cowplot): New variable.
2017-01-20 15:38:02 +01:00
4f98c3c553
gnu: obs: Update to 17.0.2.
...
* gnu/packages/video.scm (obs): Update to 17.0.2.
[inputs]: Add alsa-lib, fontconfig, speex.
2017-01-20 11:33:19 +02:00
10a8746968
gnu: mariadb: Update to 10.1.21 [security fixes].
...
Fixes CVE-2016-3238 and CVE-2017-{3238,3243,3244,3257,3258,3265,3291,3312,3317,
3318}.
* gnu/packages/databases.scm (mariadb): Update to 10.1.21.
2017-01-19 21:24:25 -05:00
0691c9c05d
gnu: ansible: Update to 2.2.1 [fixes CVE-2016-9587].
...
* gnu/packages/admin.scm (ansible): Update to 2.2.1.
2017-01-19 17:59:23 +01:00
cb6d322afc
gnu: dnsmasq: Enable dbus support.
...
* gnu/pacakges/dns.scm (dnsmasq): Enable dbus support to allow for
NetworkManager to use dnsmasq.
[native-inputs]: Add pkg-config.
[inputs]: Add dbus.
[arguments]: Add COPTS="-DHAVE_DBUS" to make-flags.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2017-01-19 20:05:24 +08:00
e87cb754a6
gnu: Add libgig.
...
* gnu/packages/music.scm (libgig): New variable.
2017-01-19 09:54:15 +01:00
67fee545cc
gnu: Add Heimdal.
...
* gnu/packages/kerberos.scm (heimdal): New variable.
2017-01-19 00:11:15 +01:00
89e34644d9
gnu: Move Kerberos implemetations to (gnu packages kerberos).
...
* gnu/packages/mit-krb5.scm: Remove.
* gnu/packages/shishi.scm: Remove.
* gnu/packages/kerberos.scm: New file, from the concatenation of these
two.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/packages/admin.scm, gnu/packages/cyrus-sasl.scm,
gnu/packages/gnome.scm, gnu/packages/gnuzilla.scm,
gnu/packages/gsasl.scm, gnu/packages/java.scm,
gnu/packages/networking.scm, gnu/packages/nfs.scm,
gnu/packages/onc-rpc.scm, gnu/packages/ssh.scm,
gnu/packages/web.scm: Adjust accordingly.
2017-01-19 00:11:15 +01:00
877c6163fa
gnu: stagit: Update to 0.5.
...
* gnu/packages/version-control.scm (stagit): Update to 0.5.
2017-01-18 22:46:50 +01:00
9ca1972767
gnu: qemu: Fix CVE-2017-5525, CVE-2017-5526.
...
* gnu/packages/qemu.scm (qemu)[source]: Add patches.
* gnu/packages/patches/qemu-CVE-2017-5525.patch,
gnu/packages/patches/qemu-CVE-2017-5526.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
2017-01-18 23:32:49 +02:00
df893a3855
gnu: Add python-cram.
...
* gnu/packages/python.scm (python-cram, python2-cram): New variables.
2017-01-18 21:28:59 +01:00
b9f771a795
gnu: Add leveldb.
...
* gnu/packages/databases.scm (leveldb): New variable.
2017-01-18 21:23:23 +01:00
cd4a232dd5
gnu: Add mcabber.
...
* gnu/packages/messaging.scm (mcabber): New variable.
Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2017-01-18 20:24:18 +01:00
fdfb4b9604
gnu: Add loudmouth.
...
* gnu/packages/messaging.scm (loudmouth): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-01-18 20:24:16 +01:00
395751c05d
gnu: Add menumaker.
...
* gnu/packages/wm.scm (menumaker): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-01-18 19:11:22 +01:00
0d53d55cca
gnu: xf86-input-evdev: Update to 2.10.5.
...
* gnu/packages/xorg.scm (xf86-input-evdev): Update to 2.10.5.
2017-01-18 18:28:35 +01:00
e19b0bd157
gnu: xf86-video-r128: Update to 6.10.2.
...
* gnu/packages/xorg.scm (xf86-video-r128): Update to 6.10.2.
2017-01-18 18:25:55 +01:00
a354c7d8b4
gnu: xf86-video-savage: Update to 2.3.9.
...
* gnu/packages/xorg.scm (xf86-video-savage): Update to 2.3.9.
2017-01-18 18:23:53 +01:00
619ff9329d
gnu: xf86-video-trident: Update to 1.3.8.
...
* gnu/packages/xorg.scm (xf86-video-trident): Update to 1.3.8.
2017-01-18 18:22:12 +01:00
a0029fda3b
gnu: xf86-video-glint: Update to 1.2.9.
...
* gnu/packages/xorg.scm (xf86-video-glint): Update to 1.2.9.
[source]: Remove upstreamed patch.
* gnu/packages/patches/xf86-video-glint-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-01-18 18:19:49 +01:00
f733e60345
gnu: xf86-video-nv: Update to 2.1.21.
...
* gnu/packages/xorg.scm (xf86-video-nv): Update to 2.1.21.
[source]: Remove upstreamed patch.
* gnu/packages/patches/xf86-video-nv-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-01-18 18:15:56 +01:00
3a50b71298
gnu: xf86-video-siliconmotion: Update to 1.7.9.
...
* gnu/packages/xorg.scm (xf86-video-siliconmotion): Update to 1.7.9.
2017-01-18 18:11:42 +01:00
c2a970582e
gnu: xf86-video-mga: Update to 1.6.5.
...
* gnu/packages/xorg.scm (xf86-video-mga): Update to 1.6.5.
2017-01-18 18:10:04 +01:00
798dd616e3
gnu: xf86-video-sis: Update to 0.10.9.
...
* gnu/packages/xorg.scm (xf86-video-sis): Update to 0.10.9.
2017-01-18 18:08:35 +01:00
76400ca594
gnu: xf86-video-tdfx: Update to 1.4.7.
...
* gnu/packages/xorg.scm (xf86-video-tdfx): Update to 1.4.7.
2017-01-18 18:05:40 +01:00
1778ea740e
gnu: multiqc: Add python-nose to inputs.
...
* gnu/packages/bioinformatics.scm (multiqc)[propagated-inputs]: Add
python-nose.
2017-01-18 16:09:49 +01:00
7c524e0f6b
gnu: screen: Update to 4.5.0.
...
* gnu/packages/screen.scm (screen): Update to 4.5.0.
[home-page]: Use https.
2017-01-18 15:51:04 +02:00
899bcad310
gnu: Add emacs-sx.
...
* gnu/packages/emacs.scm (emacs-sx): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2017-01-18 12:57:23 +03:00
cf006d2e73
gnu: Add emacs-ag.
...
* gnu/packages/emacs.scm (emacs-ag): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2017-01-18 12:57:23 +03:00
12b8f6b401
gnu: Add font-wqy-microhei.
...
* gnu/packages/fonts.scm (font-wqy-microhei): New variable.
2017-01-18 09:43:14 +01:00
3163a289ab
gnu: Add mlmmj.
...
* gnu/packages/mail.scm (mlmmj): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-17 23:57:15 +01:00
1f4f2360ad
gnu: guile-json: Update to 0.6.0.
...
* gnu/packages/guile.scm (guile-json): Update to 0.6.0.
2017-01-17 23:57:15 +01:00
fd6e260ef7
gnu: Add ocaml-ocurl.
...
* gnu/pcakages/ocaml.scm (ocaml-ocurl): New variable.
2017-01-17 23:22:07 +01:00
800ab1fb16
gnu: Add ocaml-jsonm.
...
* gnu/packages/ocaml.scm (ocaml-jsonm): New variable.
2017-01-17 23:21:42 +01:00
84290923d9
gnu: Add ocaml-uutf.
...
* gna/packages/ocaml.scm (ocaml-uutf): New variable.
2017-01-17 23:21:22 +01:00
33f16b9a57
gnu: Add ocaml-uchar.
...
* gnu/packages/ocaml.scm (ocaml-uchar): New variable.
2017-01-17 23:20:55 +01:00
6e9b678efe
gnu: Add ocaml-ulex.
...
* gnu/packages/ocaml.scm (ocaml-ulex): New variable.
2017-01-17 23:20:13 +01:00
036b857978
gnu: Add ocaml-xmlm.
...
* gnu/packages/ocaml.scm (ocaml-xmlm): New variable.
2017-01-17 23:14:42 +01:00
33e0702d8a
gnu: Add ocaml-bos.
...
* gnu/packages/ocaml.scm (ocaml-bos): New variable.
2017-01-17 23:14:38 +01:00
fbf38b0985
gnu: Add ocaml-fpath.
...
* gnu/packages/ocaml.scm (ocaml-fpath): New variable.
2017-01-17 23:14:34 +01:00
9dc7dcb261
gnu: Add ocaml-logs.
...
* gnu/packages/ocaml.scm (ocaml-logs): New variable.
2017-01-17 23:13:19 +01:00
66da3a9f31
gnu: Add r-msnid.
...
* gnu/packages/bioinformatics.scm (r-msnid): New variable.
2017-01-17 21:46:50 +01:00
11879284cb
gnu: Add r-msnbase.
...
* gnu/packages/bioinformatics.scm (r-msnbase): New variable.
2017-01-17 21:46:50 +01:00
6a67e181ac
gnu: Add r-pcamethods.
...
* gnu/packages/bioinformatics.scm (r-pcamethods): New variable.
2017-01-17 21:46:50 +01:00
4aa7d592f1
gnu: Add r-mzid.
...
* gnu/packages/bioinformatics.scm (r-mzid): New variable.
2017-01-17 21:46:50 +01:00
7c08afaf7b
gnu: Add r-vsn.
...
* gnu/packages/bioinformatics.scm (r-vsn): New variable.
2017-01-17 21:46:50 +01:00
05c7e5fb76
gnu: Add r-affy.
...
* gnu/packages/bioinformatics.scm (r-affy): New variable.
2017-01-17 21:46:49 +01:00
5c9d15055f
gnu: Add r-affyio.
...
* gnu/packages/bioinformatics.scm (r-affyio): New variable.
2017-01-17 21:46:49 +01:00
71676a1f4c
gnu: Add r-mzr.
...
* gnu/packages/bioinformatics.scm (r-mzr): New variable.
2017-01-17 21:46:49 +01:00
ae26217430
gnu: Add r-protgenerics.
...
* gnu/packages/bioinformatics.scm (r-protgenerics): New variable.
2017-01-17 21:46:49 +01:00
0e7d058e44
gnu: Add r-maldiquant.
...
* gnu/packages/bioinformatics.scm (r-maldiquant): New variable.
2017-01-17 21:46:49 +01:00
1f40e73cb5
gnu: Add r-raremetals2.
...
* gnu/packages/bioinformatics.scm (r-raremetals2): New variable.
2017-01-17 21:46:48 +01:00
fb1e528ef1
gnu: Add r-seqminer.
...
* gnu/packages/bioinformatics.scm (r-seqminer): New variable.
2017-01-17 21:46:48 +01:00
26a281ef27
gnu: Add r-compquadform.
...
* gnu/packages/statistics.scm (r-compquadform): New variable.
2017-01-17 21:46:48 +01:00
769fc6bb18
gnu: Add ribodiff.
...
* gnu/packages/bioinformatics.scm (ribodiff): New variable.
2017-01-17 21:46:48 +01:00
e84efc50d7
gnu: Add hisat2.
...
* gnu/packages/bioinformatics.scm (hisat2): New variable.
2017-01-17 21:46:48 +01:00
5f764dd7ff
gnu: Add r-fivethirtyeight.
...
* gnu/packages/statistics.scm (r-fivethirtyeight): New variable.
2017-01-17 21:46:47 +01:00
40effef7ca
gnu: powertabeditor: Update to 2.0.0-alpha9.
...
* gnu/packages/music.scm (powertabeditor): Update to 2.0.0-alpha9.
[source]: Simplify snippet.
[arguments]: Adjust phases; remove unnecessary configure flag.
2017-01-17 21:46:25 +01:00
46076d08ed
Revert "gnu: cups-filters: Disable mutool integration."
...
This change would cause 594 packages to be rebuilt, so it was moved to
the staging branch.
This reverts commit 58a7bbc5fe
2017-01-17 15:13:54 -05:00
cf3768fa06
gnu: webkitgtk: Update to 2.14.3 [security fixes].
...
Fixes CVE-2016-{7586,7589,7592,7599,7623,7632,7635,7639,7641,7645,7652,7654,7656}.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.14.3.
2017-01-17 14:56:13 -05:00
58a7bbc5fe
gnu: cups-filters: Disable mutool integration.
...
* gnu/packages/cups.scm (cups-filters)[arguments]: Add ‘--disable-mutool’
to #:configure-flags.
[inputs]: Remove mupdf.
2017-01-17 18:42:37 +01:00
16869cecf6
gnu: libpsl: Update to 0.17.0.
...
* gnu/packages/web.scm (libpsl): Update to 0.17.0.
2017-01-17 18:42:36 +01:00
cdb93e50ea
gnu: proxychains-ng: Update to 4.12.
...
* gnu/packages/networking.scm (proxychains-ng): Update to 4.12.
2017-01-17 18:42:34 +01:00
718c12786b
gnu: password-store: Install bash completions.
...
* gnu/packages/password-utils.scm (password-store)[arguments]: Add
'install-shell-completions' phase.
2017-01-17 16:18:35 +01:00
c554c6bab8
gnu: gnucash: Update to 2.6.15.
...
* gnu/packages/gnucash.scm (gnucash): Update to 2.6.15.
2017-01-17 15:07:08 +01:00
065d012511
gnu: Add proj.4.
...
* gnu/packages/geo.scm (proj.4): New variable.
(gnome-maps): Use license: prefix.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-01-17 14:41:08 +01:00
f68647299c
gnu: xscreensaver: Update to 5.36.
...
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.36.
2017-01-17 14:21:10 +01:00
ae6591efa5
gnu: perl-image-exiftool: Update to 10.40.
...
* gnu/packages/photo.scm (perl-image-exiftool): Update to 10.40.
[synopsis, description]: Mention more capabilities.
2017-01-17 03:50:36 -05:00
265afbdfe7
gnu: ghc-quickcheck-instances: Update to 0.3.12.
...
* gnu/packages/haskell.scm (ghc-quickcheck-instances): Update to 0.3.12.
[inputs]: Add ghc-scientific and ghc-vector.
2017-01-17 03:58:19 +01:00
19083a5eee
gnu: imagemagick: Update to 6.9.7-4 [security fixes].
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-4.
2017-01-16 18:39:41 -05:00
9381a02a53
gnu: Add scrypt.
...
* gnu/packages/crypto.scm (scrypt): New variable.
2017-01-16 18:02:14 -05:00
ce9701fb95
gnu: Add emacs-stripe-buffer.
...
* gnu/packages/emacs.scm (emacs-stripe-buffer): New variable.
2017-01-16 23:37:43 +01:00
0b35f11d76
gnu: Add emacs-git-timemachine.
...
* gnu/packages/emacs.scm (emacs-git-timemachine): New variable.
2017-01-16 23:37:43 +01:00
ae21519f63
gnu: guile-sqlite3: Provide a new source URL.
...
* gnu/packages/guile.scm (guile-sqlite3)[home-page]: Change.
2017-01-16 23:27:23 +01:00
b91cfa22e1
gnu: Add r-centipede.
...
* gnu/packages/bioinformatics.scm (r-centipede): New variable.
2017-01-16 23:18:27 +01:00
1fdfbadff0
gnu: Add ocaml-lwt.
...
* gnu/packages/ocaml.scm (ocaml-lwt): New variable.
2017-01-16 22:34:53 +01:00
37f17e2a1e
gnu: Add ocaml-ssl.
...
* gnu/packages/ocaml.scm (ocaml-ssl): New variable.
2017-01-16 22:34:51 +01:00
1342fce102
gnu: Add ocaml-react.
...
* gnu/packages/ocaml.scm (ocaml-react): New variable.
2017-01-16 22:34:48 +01:00
0a7b43a818
gnu: Add ocaml-ppx-tools.
...
* gnu/packages/ocaml.scm (ocaml-ppx-tools): New variable.
2017-01-16 22:34:45 +01:00
69705efe94
gnu: Add ocaml-alcotest.
...
* gnu/packages/ocaml.scm (ocaml-alcotest): New variable.
2017-01-16 22:34:42 +01:00
f46bceb670
gnu: Add ocaml-astring.
...
* gnu/packages/ocaml.scm (ocaml-astring): New variable.
2017-01-16 22:34:39 +01:00
beeb2d419b
gnu: Add ocaml-fmt.
...
* gnu/packages/ocaml.scm (ocaml-fmt): New variable.
2017-01-16 22:34:36 +01:00
8fe6b9327d
gnu: camlzip: Install both modules.
...
* gnu/packages/ocaml.scm (camlzip) [arguments]: Install both zip and camlzip
modules.
2017-01-16 22:34:30 +01:00
138adbbe05
gnu: Add python-autopep8.
...
* gnu/packages/python.scm (python-autopep8, python2-autopep8): New variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-16 22:13:21 +01:00
Marius Bakke