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34642 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice dc98bbcad4
gnu: r-lava: Update to 1.6.3. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.3.
 2018-08-20 20:17:17 +02:00
Tobias Geerinckx-Rice 632cefdac9
gnu: r-mitml: Update to 0.3-6. 
* gnu/packages/cran.scm (r-mitml): Update to 0.3-6.
 2018-08-20 20:17:17 +02:00
Tobias Geerinckx-Rice 658e37b6e8
gnu: r-vgam: Update to 1.0-6. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.0-6.
 2018-08-20 20:17:17 +02:00
Leo Famulari cfad074ef5
nls: Update 'fr' translation. 2018-08-20 14:02:08 -04:00
Tobias Geerinckx-Rice 52773e5cf4
gnu: python-py: Use HTTPS home page. 
* gnu/packages/python.scm (python-py)[home-page]: Use HTTPS.
 2018-08-20 16:36:20 +02:00
Tobias Geerinckx-Rice c85626bb0f
gnu: xpad: Update to 5.1.0. 
* gnu/packages/gnome.scm (xpad): Update to 5.1.0.
[arguments]: Remove obsolete ‘run-autogen’ phase.
 2018-08-20 16:35:55 +02:00
Tobias Geerinckx-Rice bc2f9dc3ce
gnu: emacs-f: Update to 0.20.0. 
* gnu/packages/emacs.scm (emacs-f): Update to 0.20.0.
 2018-08-20 16:35:55 +02:00
Tobias Geerinckx-Rice bd0570f21d
gnu: emacs-f: Don't use unstable tarball. 
* gnu/packages/emacs.scm (emacs-f)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-08-20 16:35:55 +02:00
Tobias Geerinckx-Rice cb4baa4da6
gnu: gimp: Report bugs to Guix. 
Upstream prints this when running ./configure. Take the hint.

  NOTE: if you plan on packaging GIMP for distribution, it is
        recommended to override the bug report URL with option:
          --with-bug-report-url=https://example.com/
        so that you can filter packaging bugs from core bugs before
        reporting upstream.

* gnu/packages/gimp.scm (gimp)[arguments]: Customise bug report URI.
 2018-08-20 16:35:54 +02:00
Tobias Geerinckx-Rice 0f83d6029e
gnu: gimp: Update to 2.10.6. 
* gnu/packages/gimp.scm (gimp): Update to 2.10.6.
 2018-08-20 16:35:54 +02:00
Tobias Geerinckx-Rice 901888a854
gnu: gegl: Update to 0.4.8. 
* gnu/packages/gimp.scm (gegl): Update to 0.4.8.
 2018-08-20 16:35:54 +02:00
Tobias Geerinckx-Rice 3cae7f582e
gnu: babl: Update to 0.1.56. 
* gnu/packages/gimp.scm (babl): Update to 0.1.56.
 2018-08-20 16:35:54 +02:00
Ludovic Courtès bab4dc58f7
import: github: Filter out tags that don't look like version numbers. 
* guix/import/github.scm (latest-released-version): Filter out RELEASE
if it doesn't start with digit.
 2018-08-20 16:32:18 +02:00
Ludovic Courtès 64bcc76c00
gnu: guile-ssh: Update to 0.11.3. 
* gnu/packages/ssh.scm (guile-ssh): Update to 0.11.3.
 2018-08-20 16:32:18 +02:00
Ludovic Courtès 0ec3800274
gnu: guile-json: Update to 1.1.1. 
* gnu/packages/guile.scm (guile-json): Update to 1.1.1.
[source]: Remove snippet.
[native-inputs]: Add PKG-CONFIG.
 2018-08-20 16:32:18 +02:00
Ludovic Courtès 45c01189cc
import: github: Get /tags when /releases returns the empty list. 
This allows "guix refresh" to work for many packages where it would
previously fail with "no updater for PACKAGE".

* guix/import/github.scm (fetch-releases-or-tags): New procedure.
(latest-released-version): Use it instead of calling 'json-fetch'.
Adjust 'hash-ref' call.
 2018-08-20 16:32:18 +02:00
Ludovic Courtès 2766282f5a
import: github: Request API v3 in the 'Accept' header. 
* guix/import/json.scm (json-fetch): Add #:headers argument and honor it.
* guix/import/github.scm (latest-released-version): Pass #:headers to
'json-fetch'.
 2018-08-20 16:32:18 +02:00
Ludovic Courtès a50eed201b
gnu: guile-redis: Update to 1.0.0. 
* gnu/packages/guile.scm (guile-redis): Update to 1.0.0.
[source]: Fetch from github.com.  Remove snippet.
[native-inputs]: Add AUTOCONF, AUTOMAKE, and PKG-CONFIG.
 2018-08-20 16:32:17 +02:00
Roel Janssen e63da346cf
gnu: Update virtuoso-ose to 7.2.5. 
* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.5.
 2018-08-20 16:13:45 +02:00
Ludovic Courtès fa4ebd2f08
doc: Remove extra space before colon in menu entries. 
Fixes <https://bugs.gnu.org/32473>.
Reported by HiPhish <hiphish@posteo.de>.

* doc/guix.texi (Top, Defining Packages): In menu, remove extra space
before "::".
 2018-08-20 12:20:45 +02:00
Rutger Helling f307a9eca5
gnu: xpra: Update to 2.3.3. 
* gnu/packages/xorg.scm (xpra): Update to 2.3.3.
 2018-08-20 08:48:53 +02:00
Rutger Helling 346c146f7f
gnu: wine-staging: Update to 3.14. 
* gnu/packages/wine.scm (wine-staging): Update to 3.14.
 2018-08-20 08:17:49 +02:00
Rutger Helling 56d4b2163a
gnu: wine-staging-patchset-data: Update to 3.14. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 3.14.
 2018-08-20 08:17:49 +02:00
Leo Famulari 1feaca62d3
gnu: syncthing: Invoke build steps with INVOKE. 
* gnu/packages/syncthing.scm (syncthing)[arguments]: Use INVOKE.
 2018-08-19 17:50:48 -04:00
Marius Bakke 146c3b2160
gnu: libconfuse: Update to 3.2.2 [fixes CVE-2018-14447]. 
* gnu/packages/wm.scm (libconfuse): Update to 3.2.2.
 2018-08-19 18:40:30 +02:00
Ludovic Courtès 0b93d04ac5
gnu: gcc@4.8: Fix libsanitizer build issue. 
Fixes <https://bugs.gnu.org/32397>.
Reported by fis trivial <ybbs.daans@hotmail.com>.

* gnu/packages/patches/gcc-4.8-libsanitizer-fix.patch: New file.
* gnu/packages/gcc.scm (gcc-4.8)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-08-19 18:21:24 +02:00
Ludovic Courtès 6d1a7ce8ea
gnu: libchop: Fix build and test errors. 
* gnu/packages/backup.scm (libchop)[arguments]: New field.
 2018-08-19 18:21:24 +02:00
Ludovic Courtès c9f898cd31
gnu: libchop: Require gperf 3.0. 
Fixes <https://bugs.gnu.org/32382>.
Reported by Björn Höfling <bjoern.hoefling@bjoernhoefling.de>.

* gnu/packages/backup.scm (libchop)[native-inputs]: Use GPERF-3.0
instead of GPERF.
 2018-08-19 18:21:24 +02:00
Marius Bakke a7bc1588e6
Merge branch 'staging' 2018-08-19 15:24:59 +02:00
Jan Nieuwenhuizen 8a502c3b60
gnu: mescc-tools: Update to 0.5.2. 
* gnu/packages/mes.scm (mescc-tools): Update to 0.5.2.
 2018-08-19 13:30:57 +02:00
Mark H Weaver 860c37b9f2
gnu: linux-libre: Update to 4.18.3. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.3.
(%linux-libre-hash): Update hash.
(%linux-libre-patches): Rename to ...
(%linux-libre-4.18-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-omap2plus):
Apply %linux-libre-4.18-patches.
 2018-08-19 02:19:20 -04:00
Mark H Weaver 08e43eba4e
gnu: linux-libre@4.14: Update to 4.14.65. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.65.
(%linux-libre-4.14-hash): Update hash.
 2018-08-19 02:16:53 -04:00
Mark H Weaver ad6baf9dc1
gnu: linux-libre@4.9: Update to 4.9.122. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.122.
 2018-08-19 02:16:08 -04:00
Mark H Weaver 1ae8efa57d
gnu: linux-libre@4.4: Update to 4.4.150. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.150.
 2018-08-19 02:15:30 -04:00
Mark H Weaver 4ecd049074
Revert "gnu: linux-libre: Add fix from 4.4.150, 4.9.122, 4.14.65, 4.18.3." 
This reverts commit 50dbd26ce0.
 2018-08-19 02:13:49 -04:00
Kei Kebreau b13ba3f1ba
gnu: gnuplot: Update to 5.2.4. 
* gnu/packages/maths.scm (gnuplot): Update to 5.2.4.
 2018-08-18 21:21:52 -04:00
Kei Kebreau e1ecaa836f
gnu: xtensor: Update to 0.17.1. 
* gnu/packages/algebra.scm (xtensor): Update to 0.17.1.
[source]: Use git-fetch.
 2018-08-18 19:48:24 -04:00
Kei Kebreau 0bb41aec99
gnu: xtl: Update to 0.4.14. 
* gnu/packages/cpp.scm (xtl): Update to 0.4.14.
[source]: Use git-fetch.
 2018-08-18 19:48:18 -04:00
Mark H Weaver 50dbd26ce0
gnu: linux-libre: Add fix from 4.4.150, 4.9.122, 4.14.65, 4.18.3. 
This adds the sole fix included in upstream versions 4.18.3, 4.14.65,
4.9.122, and 4.4.150.

* gnu/packages/linux.scm
(%linux-libre-exempt-zeroed-PTEs-from-inversion-patch): New variable.
(%linux-libre-patches): Repurposed for patches applicable to all versions.
Add the aforementioned fix.
(%linux-libre-4.18-patches): New variable, with definition based on the
previous %linux-libre-patches.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-omap2plus):
Add %linux-libre-4.18-patches.
(linux-libre-4.14, linux-libre-arm-generic-4.14)
(linux-libre-arm-omap2plus-4.14, linux-libre-4.9)
(linux-libre-4.4): Add %linux-libre-patches.
 2018-08-18 15:40:02 -04:00
Mark H Weaver 863e61994c
gnu: linux-libre: Update to 4.18.2. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.2.
(%linux-libre-hash): Update hash.
 2018-08-18 15:39:59 -04:00
Mark H Weaver b8b2247803
gnu: linux-libre@4.14: Update to 4.14.64. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.64.
(%linux-libre-4.14-hash): Update hash.
 2018-08-18 15:39:57 -04:00
Mark H Weaver 32f4859399
gnu: linux-libre@4.9: Update to 4.9.121. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.121.
 2018-08-18 15:39:55 -04:00
Mark H Weaver f36f5170b2
gnu: linux-libre@4.4: Update to 4.4.149. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.149.
 2018-08-18 15:39:48 -04:00
Tobias Geerinckx-Rice 8e950ee99c
gnu: sudo: Update to 1.8.24. 
* gnu/packages/admin.scm (sudo): Update to 1.8.24.
 2018-08-18 21:18:21 +02:00
Kei Kebreau f35c3bbb68
gnu: singular: Update to 4.1.1p3. 
* gnu/packages/algebra.scm (singular): Update to 4.1.1p3.
 2018-08-18 12:04:54 -04:00
Kei Kebreau 7fe491fbc8
gnu: cddlib: Update to 0.94i. 
* gnu/packages/maths.scm (cddlib): Update to 0.94i.
 2018-08-18 12:04:54 -04:00
Tobias Geerinckx-Rice 8cd80a4b61
gnu: eigen: Update to 3.3.5. 
* gnu/packages/algebra.scm (eigen): Update to 3.3.5.
[source]: Remove upstreamed ARM patch and obsolete substitutions.
* gnu/packages/patches/eigen-arm-neon-fixes.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-08-18 16:40:31 +02:00
Tobias Geerinckx-Rice fbe9c80fb7
gnu: eigen: Throw exceptions on test failure. 
* gnu/packages/algebra.scm (eigen)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-08-18 16:19:58 +02:00
Tobias Geerinckx-Rice 1b00e3bd2d
gnu: knot: Update to 2.7.1. 
* gnu/packages/dns.scm (knot): Update to 2.7.1.
[inputs]: Remove nettle, python-2, and python2-lmdb.
[arguments]: Remove ‘wrap-python-scripts’ phase for removed migration
scripts. Remove obsolete modules from, and add dnstap support for the
command-line tools to, #:configure-flags.
 2018-08-18 16:07:00 +02:00
Tobias Geerinckx-Rice ee1362fc07
gnu: knot: Deduplicate documentation directories. 
* gnu/packages/dns.scm (knot)[arguments]: Install documentation to the
correct versioned subdirectory, as already done by the build system.
 2018-08-18 16:07:00 +02:00