Commit Graph

1195 Commits

Author SHA1 Message Date
Ricardo Wurmus df0f876ee4
gnu: r-pbapply: Update to 1.4-2.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-2.
2019-09-02 14:40:56 +02:00
Ricardo Wurmus 21890aad50
gnu: r-rmarkdown: Update to 1.15.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.15.
2019-09-02 14:40:56 +02:00
Ricardo Wurmus a1a7afc06c
gnu: r-hms: Update to 0.5.1.
* gnu/packages/statistics.scm (r-hms): Update to 0.5.1.
2019-09-02 14:40:56 +02:00
Ricardo Wurmus b21620bb47
gnu: r-whisker: Update to 0.4.
* gnu/packages/statistics.scm (r-whisker): Update to 0.4.
2019-09-02 14:40:56 +02:00
Ricardo Wurmus 560f7c949a
gnu: r-chron: Update to 2.3-54.
* gnu/packages/statistics.scm (r-chron): Update to 2.3-54.
2019-09-02 14:40:56 +02:00
Robert Vollmert dddbc90c64
gnu: Move non-compilers out of haskell.scm.
* gnu/packages/haskell.scm (ghc-abstract-deque, ghc-abstract-par,
ghc-adjunctions, ghc-aeson-compat, ghc-alex, ghc-alsa-core,
ghc-annotated-wl-pprint, ghc-ansi-terminal, ghc-ansi-wl-pprint,
ghc-appar, ghc-async, ghc-atomic-write, ghc-attoparsec,
ghc-attoparsec-bootstrap, ghc-attoparsec-iso8601, ghc-auto-update,
ghc-aws, ghc-base16-bytestring, ghc-base64-bytestring, ghc-base-compat,
ghc-basement, ghc-base-orphans, ghc-base-prelude,
ghc-base-unicode-symbols, ghc-bifunctors, ghc-bindings-dsl,
ghc-blaze-builder, ghc-blaze-markup, ghc-bloomfilter, ghc-boxes,
ghc-byteable, ghc-byteorder, ghc-bytes, ghc-bytestring-builder,
ghc-bytestring-handle, ghc-bytestring-lexing, ghc-bzlib-conduit,
ghc-c2hs, ghc-cairo, ghc-call-stack, ghc-call-stack-boot,
ghc-case-insensitive, ghc-cereal, ghc-cereal-conduit, ghc-cgi,
ghc-charset, ghc-chart, ghc-chart-cairo, ghc-chasingbottoms,
ghc-cheapskate, ghc-chell, ghc-chell-quickcheck, ghc-chunked-data,
ghc-clock, ghc-clock-bootstrap, ghc-cmark, ghc-cmark-gfm, ghc-cmdargs,
ghc-code-page, ghc-colour, ghc-comonad, ghc-concatenative,
ghc-concurrent-output, ghc-conduit, ghc-conduit-algorithms,
ghc-conduit-combinators, ghc-conduit-extra, ghc-configurator,
ghc-connection, ghc-constraints, ghc-contravariant,
ghc-contravariant-extras, ghc-convertible, ghc-data-accessor,
ghc-data-accessor-transformers, ghc-data-default,
ghc-data-default-class, ghc-data-default-instances-base,
ghc-data-default-instances-containers, ghc-data-default-instances-dlist,
ghc-data-default-instances-old-locale, ghc-data-hash, ghc-data-ordlist,
ghc-deepseq-generics, ghc-descriptive, ghc-diff, ghc-disk-free-space,
ghc-distributive, ghc-dlist, ghc-doctemplates, ghc-doctest,
ghc-double-conversion, ghc-easy-file, ghc-easyplot, ghc-echo,
ghc-edisonapi, ghc-edisoncore, ghc-edit-distance, ghc-either,
ghc-email-validate, ghc-enclosed-exceptions, ghc-equivalence, ghc-erf,
ghc-errorcall-eq-instance, ghc-errors, ghc-esqueleto, ghc-exactprint,
ghc-exceptions, ghc-executable-path, ghc-extensible-exceptions,
ghc-extra, ghc-fail, ghc-fast-logger, ghc-feed, ghc-fgl,
ghc-fgl-arbitrary, ghc-file-embed, ghc-filemanip, ghc-findbin,
ghc-fingertree, ghc-fixed, ghc-foldl, ghc-foundation, ghc-free,
ghc-fsnotify, ghc-generic-deriving, ghc-generics-sop,
ghc-geniplate-mirror, ghc-genvalidity, ghc-genvalidity-property,
ghc-gitrev, ghc-glob, ghc-gluraw, ghc-glut, ghc-gnuplot, ghc-graphviz,
ghc-gtk2hs-buildtools, ghc-hackage-security, ghc-haddock,
ghc-haddock-api, ghc-haddock-library, ghc-half, ghc-happy, ghc-hashable,
ghc-hashable-bootstrap, ghc-hashable-time, ghc-hashtables,
ghc-haskell-lexer, ghc-haskell-src, ghc-haskell-src-exts,
ghc-haskell-src-exts-util, ghc-haskell-src-meta, ghc-hasktags, ghc-hex,
ghc-highlighting-kate, ghc-hindent, ghc-hinotify, ghc-hmatrix,
ghc-hmatrix-gsl, ghc-hmatrix-gsl-stats, ghc-hmatrix-special,
ghc-hostname, ghc-hourglass, ghc-hpack, ghc-hs-bibutils, ghc-hslogger,
ghc-hslua, ghc-hslua-module-text, ghc-http-api-data, ghc-ieee754,
ghc-ifelse, ghc-indents, ghc-inline-c, ghc-inline-c-cpp,
ghc-integer-logarithms, ghc-integer-logarithms-bootstrap,
ghc-interpolate, ghc-intervalmap, ghc-invariant, ghc-iproute, ghc-iwlib,
ghc-json, ghc-juicypixels, ghc-kan-extensions, ghc-language-c,
ghc-language-haskell-extract, ghc-lens, ghc-libffi, ghc-libmpd,
ghc-libxml, ghc-lifted-async, ghc-lifted-base, ghc-linear,
ghc-logging-facade, ghc-logict, ghc-lzma, ghc-lzma-conduit,
ghc-markdown-unlit, ghc-math-functions, ghc-megaparsec, ghc-memory,
ghc-memotrie, ghc-microlens, ghc-microlens-ghc, ghc-microlens-mtl,
ghc-microlens-platform, ghc-microlens-th, ghc-missingh, ghc-mmap,
ghc-mmorph, ghc-mockery, ghc-monad-control, ghc-monad-logger,
ghc-monad-loops, ghc-monad-par, ghc-monad-par-extras, ghc-monadplus,
ghc-monadrandom, ghc-monads-tf, ghc-mono-traversable, ghc-murmur-hash,
ghc-mwc-random, ghc-nats, ghc-nats-bootstrap, ghc-network,
ghc-network-info, ghc-network-uri, ghc-newtype-generics, ghc-objectname,
ghc-old-locale, ghc-old-time, ghc-opengl, ghc-openglraw,
ghc-operational, ghc-options, ghc-optparse-applicative, ghc-pandoc,
ghc-pandoc-citeproc, ghc-pandoc-types, ghc-parallel, ghc-parsec-numbers,
ghc-parser-combinators, ghc-parsers, ghc-path, ghc-path-io, ghc-paths,
ghc-patience, ghc-pcre-light, ghc-persistent, ghc-persistent-sqlite,
ghc-persistent-template, ghc-polyparse, ghc-pqueue, ghc-prelude-extras,
ghc-pretty-hex, ghc-pretty-show, ghc-primitive, ghc-profunctors,
ghc-psqueues, ghc-random, ghc-raw-strings-qq, ghc-rebase, ghc-reducers,
ghc-refact, ghc-reflection, ghc-regex, ghc-regex-applicative,
ghc-regex-base, ghc-regex-compat, ghc-regex-compat-tdfa,
ghc-regex-pcre-builtin, ghc-regex-posix, ghc-regex-tdfa,
ghc-regex-tdfa-text, ghc-rerebase, ghc-resolv, ghc-resource-pool,
ghc-resourcet, ghc-rfc5051, ghc-rio, ghc-safe, ghc-safe-exceptions,
ghc-safeio, ghc-safesemaphore, ghc-sandi, ghc-scientific,
ghc-scientific-bootstrap, ghc-sdl, ghc-sdl-image, ghc-sdl-mixer,
ghc-securemem, ghc-semigroupoids, ghc-semigroups,
ghc-semigroups-bootstrap, ghc-setenv, ghc-setlocale, ghc-shakespeare,
ghc-shelly, ghc-silently, ghc-simple-reflect, ghc-simple-sendfile,
ghc-skylighting-core, ghc-skylighting, ghc-smallcheck, ghc-socks,
ghc-split, ghc-statevar, ghc-statistics, ghc-stm-chans, ghc-stm-conduit,
ghc-stmonadtrans, ghc-storable-complex, ghc-streaming-commons,
ghc-strict, ghc-stringbuilder, ghc-string-qq, ghc-stringsearch,
ghc-stylish-haskell, ghc-syb, ghc-system-fileio, ghc-system-filepath,
ghc-tagged, ghc-tar, ghc-temporary, ghc-temporary-rc, ghc-terminal-size,
ghc-texmath, ghc-text-binary, ghc-tf-random, ghc-th-abstraction,
ghc-th-expand-syns, ghc-th-lift, ghc-th-lift-instances, ghc-th-orphans,
ghc-th-reify-many, ghc-time-locale-compat, ghc-tldr,
ghc-transformers-base, ghc-transformers-compat, ghc-tree-diff,
ghc-trifecta, ghc-tuple-th, ghc-typed-process, ghc-unbounded-delays,
ghc-unexceptionalio, ghc-union-find, ghc-uniplate, ghc-unix-compat,
ghc-unix-time, ghc-unliftio, ghc-unliftio-core,
ghc-unordered-containers, ghc-unordered-containers-bootstrap,
ghc-uri-bytestring, ghc-utf8-string, ghc-utility-ht, ghc-uuid,
ghc-uuid-types, ghc-validation, ghc-validity, ghc-vault, ghc-vector,
ghc-vector-algorithms, ghc-vector-binary-instances, ghc-vector-builder,
ghc-vector-th-unbox, ghc-void, ghc-wave, ghc-wcwidth,
ghc-wcwidth-bootstrap, ghc-weigh, ghc-wl-pprint,
ghc-wl-pprint-annotated, ghc-wl-pprint-text, ghc-word8, ghc-x11,
ghc-x11-xft, ghc-xdg-basedir, ghc-xml, ghc-xml-conduit, ghc-xml-types,
ghc-yaml, ghc-zip-archive, ghc-zlib): Move variables from here...
* gnu/packages/haskell-xyz.scm: ...to here.
* gnu/packages/agda.scm,
gnu/packages/bioconductor.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/cran.scm,
gnu/packages/emacs-xyz.scm,
gnu/packages/games.scm,
gnu/packages/graphics.scm,
gnu/packages/haskell-apps.scm,
gnu/packages/haskell-check.scm,
gnu/packages/idris.scm,
gnu/packages/statistics.scm,
gnu/packages/wm.scm: Update module references.

Co-authored-by: Timothy Sample <samplet@ngyro.com>
2019-08-31 09:25:49 -04:00
Ricardo Wurmus fdc22edb6c
gnu: r-ggplot2: Update to 3.2.1.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.2.1.
2019-08-12 10:25:29 +02:00
Ricardo Wurmus 813b7210aa
gnu: r-with-tests: Update to 3.6.1.
* gnu/packages/statistics.scm (r-with-tests): Update to 3.6.1.
2019-08-12 10:25:29 +02:00
Ricardo Wurmus e33e3a14c5
gnu: r-xml2: Update to 1.2.2.
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.2.
2019-08-09 16:03:50 +02:00
Ricardo Wurmus eb8963d989
gnu: r-quantreg: Update to 5.51.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.51.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus eaca771e88
gnu: r-knitr: Update to 1.24.
* gnu/packages/statistics.scm (r-knitr): Update to 1.24.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus 9649072cbd
gnu: r-markdown: Update to 1.1.
* gnu/packages/statistics.scm (r-markdown): Update to 1.1.
[propagated-inputs]: Add r-xfun.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus 9bd1333e58
Merge remote-tracking branch 'origin/master' into wip-texlive 2019-08-07 22:26:55 +02:00
Ricardo Wurmus fdc0688cba
gnu: r-dt: Update to 0.8.
* gnu/packages/statistics.scm (r-dt): Update to 0.8.
[propagated-inputs]: Add r-jsonlite.
2019-08-07 12:54:43 +02:00
Ricardo Wurmus 17e43c425d
gnu: r-quantreg: Update to 5.42.1.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.42.1.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 599fbee5fb
gnu: r-pbapply: Update to 1.4-1.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-1.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 0910ff0cfc
gnu: r-robust: Update to 0.4-18.1.
* gnu/packages/statistics.scm (r-robust): Update to 0.4-18.1.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus ddfd0afb2a
gnu: r-mclust: Update to 5.4.5.
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.5.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 58aa971fbd
gnu: r-fastica: Update to 1.2-2.
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-2.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus db93ef0948
gnu: r-cowplot: Update to 1.0.0.
* gnu/packages/statistics.scm (r-cowplot): Update to 1.0.0.
[propagated-inputs]: Remove r-plyr; add r-rlang.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus b2fea05954
gnu: r-rngtools: Update to 1.4.
* gnu/packages/statistics.scm (r-rngtools): Update to 1.4.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 8d84a0ad70
gnu: r-domc: Update to 1.3.6.
* gnu/packages/statistics.scm (r-domc): Update to 1.3.6.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 862959813f
gnu: r-doparallel: Update to 1.0.15.
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.15.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 5a01128f45
gnu: r-foreach: Update to 1.4.7.
* gnu/packages/statistics.scm (r-foreach): Update to 1.4.7.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus b41d03dd35
gnu: r-iterators: Update to 1.0.12.
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.12.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 90752043dd
gnu: r-rsqlite: Update to 2.1.2.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.2.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 2de0f885f4
gnu: r-blob: Update to 1.2.0.
* gnu/packages/statistics.scm (r-blob): Update to 1.2.0.
[propagated-inputs]: Add r-rlang and r-vctrs; remove r-tibble.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus feb261ee9b
gnu: r-rmarkdown: Update to 1.14.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.14.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 6af62ad50a
gnu: r-rcpparmadillo: Update to 0.9.600.4.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.600.4.0.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9b02d1c836
gnu: r-hms: Update to 0.5.0.
* gnu/packages/statistics.scm (r-hms): Update to 0.5.0.
[propagated-inputs]: Add r-vctrs.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 78896ba23b
gnu: r-devtools: Update to 2.1.0.
* gnu/packages/statistics.scm (r-devtools): Update to 2.1.0.
[propagated-inputs]: Add r-roxygen2 and r-testthat.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 1df87085e3
gnu: r-git2r: Update to 0.26.1.
* gnu/packages/statistics.scm (r-git2r): Update to 0.26.1.
[inputs]: Remove libssh2 and openssl; add libgit2.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9236b2c144
gnu: r-httr: Update to 1.4.1.
* gnu/packages/statistics.scm (r-httr): Update to 1.4.1.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 3511aff992
gnu: r-openssl: Update to 1.4.1.
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.1.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus c02bb7e901
gnu: r-checkmate: Update to 1.9.4.
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.4.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus b29ecb8e37
gnu: r-xml2: Update to 1.2.1.
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.1.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 8d932e71d6
gnu: r-coda: Update to 0.19-3.
* gnu/packages/statistics.scm (r-coda): Update to 0.19-3.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 7d36001bd2
gnu: r-dplyr: Update to 0.8.3.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.3.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus eae8e56a64
gnu: r-testthat: Update to 2.2.1.
* gnu/packages/statistics.scm (r-testthat): Update to 2.2.1.
[propagated-inputs]: Add r-evaluate.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus c2e85d0265
gnu: r-digest: Update to 0.6.20.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.20.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus d6e54e7002
gnu: r-nlme: Update to 3.1-141.
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-141.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus ecebfe51ce
gnu: r-foreign: Update to 0.8-72.
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-72.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus 6eccb0879f
gnu: r-boot: Update to 1.3-23.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-23.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus f75aa97f95
gnu: Replace uses of texlive-*-amsfonts.
* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Replace
texlive-fonts-amsfonts and texlive-latex-amsfonts with texlive-amsfonts in
texlive-union.
* gnu/packages/docbook.scm (dblatex)[inputs]: Same.
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Same.
* gnu/packages/python-xyz.scm (python-numpy-documentation,
python-matplotlib-documentation, python-ipython-documentation)
[native-inputs]: Same.
* gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Same.
* gnu/packages/tex.scm (teximpatient)[native-inputs]: Same.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 29fe71152f
gnu: python-rpy2: Update to 3.0.4-1.19868a8.
* gnu/packages/statistics.scm (python-rpy2): Update to 3.0.4-1.19868a8.
[source]: Fetch from repository.
[propagated-inputs]: Add python-cffi, python-numpy, python-pandas,
python-ipython, and python-tzlocal.
[native-inputs]: Add python-pytest.
[arguments]: Set TZ variable and use pytest to run the tests.
2019-07-13 23:50:01 +02:00
Ricardo Wurmus 3d0c9ff83e
gnu: r-quantreg: Update to 5.41.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.41.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus 73a29d39b3
gnu: r-fpc: Update to 2.2-3.
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-3.
[propagated-inputs]: Remove r-mvtnorm.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus 666a5a649c
gnu: r-mclust: Update to 5.4.4.
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.4.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus fad641716e
gnu: r-mvtnorm: Update to 1.0-11.
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-11.
2019-06-29 01:34:45 +02:00
Ricardo Wurmus 30f7acdb6b
gnu: r-segmented: Update to 1.0-0.
* gnu/packages/statistics.scm (r-segmented): Update to 1.0-0.
2019-06-29 01:34:45 +02:00