07d0645b6b
gnu: r-backports: Update to 1.1.5.
...
* gnu/packages/statistics.scm (r-backports): Update to 1.1.5.
2019-10-06 23:08:47 +02:00
f817005bfe
gnu: r-gargle: Update to 0.4.0.
...
* gnu/packages/cran.scm (r-gargle): Update to 0.4.0.
2019-10-06 23:08:47 +02:00
9b112f4030
gnu: r-rcppparallel: Update to 4.4.4.
...
* gnu/packages/cran.scm (r-rcppparallel): Update to 4.4.4.
2019-10-06 23:08:47 +02:00
770321180f
gnu: r-hdf5r: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-hdf5r): Update to 1.3.0.
2019-10-06 23:08:47 +02:00
2e6ccd6c2d
gnu: r-promises: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-promises): Update to 1.1.0.
2019-10-06 23:08:47 +02:00
ab99236eba
gnu: r-later: Update to 1.0.0.
...
* gnu/packages/cran.scm (r-later): Update to 1.0.0.
2019-10-06 23:08:47 +02:00
b7e7c320a2
gnu: r-maptools: Update to 0.9-8.
...
* gnu/packages/cran.scm (r-maptools): Update to 0.9-8.
2019-10-06 23:08:47 +02:00
ff74344597
gnu: r-htmlwidgets: Update to 1.5.
...
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.5.
2019-10-06 23:08:47 +02:00
82acc94fbf
gnu: r-htmltools: Update to 0.4.0.
...
* gnu/packages/cran.scm (r-htmltools): Update to 0.4.0.
[arguments]: Remove field.
[propagated-inputs]: Add r-rlang.
2019-10-06 23:08:47 +02:00
33651044c6
gnu: r-seurat: Update to 3.1.1.
...
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.1.
[propagated-inputs]: Add r-httr.
2019-10-06 23:08:47 +02:00
94638cbe77
gnu: r-rsamtools: Update to 2.0.2.
...
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.2.
2019-10-06 23:08:47 +02:00
122c1b3ce7
gnu: r-biomart: Update to 2.40.5.
...
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.5.
2019-10-06 23:08:46 +02:00
d050fdf4c6
gnu: emacs-helm-ag: Fix version.
...
* gnu/packages/emacs-xyz.scm (emacs-helm-ag): Fix version.
2019-10-06 22:08:27 +02:00
cb2197508a
gnu: Add emacs-helm-org.
...
* gnu/packages/emacs-xyz.scm (emacs-helm-org): New variable.
2019-10-06 22:08:27 +02:00
45d04b2a7d
gnu: emacs-helm: Update to 3.5.0.
...
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.5.0.
2019-10-06 22:08:27 +02:00
4722330d68
gnu: nss-pam-ldapd: Update to 0.9.11.
...
* gnu/packages/openldap.scm (nss-pam-ldapd): Update to 0.9.11.
[inputs]: Replace python-2 with python.
2019-10-06 22:07:07 +02:00
e08902d3cb
Merge branch 'master' into core-updates
2019-10-06 22:02:20 +02:00
f58702465d
gnu: Add mloop.
...
* gnu/packages/music.scm (mloop): New variable.
2019-10-06 22:01:01 +02:00
4b94e63db6
gnu: guile-studio: Update to 0-2.4d63f3d.
...
* gnu/packages/guile-xyz.scm (guile-studio): Update to 0-2.4d63f3d.
2019-10-06 22:01:01 +02:00
1b6f99ea53
gnu: icedtea-7: Fix build on i686-linux.
...
* gnu/packages/java.scm (icedtea-7)[arguments]: Use "i386" lib directory when
the system is "i686-linux".
2019-10-06 22:01:01 +02:00
fc37b4afb2
gnu: jamvm-1-bootstrap: Fix segfault in bootstrap JVM.
...
* gnu/packages/java.scm (jamvm-1-bootstrap)[arguments]: Add configure flags:
--disable-int-caching, --enable-runtime-reloc-checks, and --enable-ffi.
[inputs]: Add libffi.
2019-10-06 22:01:01 +02:00
ff810d21a5
gnu: emacs-hackernews: Update to 0.5.0-2.2362d7b.
...
* gnu/packages/emacs-xyz.scm (emacs-hackernews): Update to 0.5.0-2.2362d7b.
2019-10-06 20:40:23 +02:00
9049f28f57
gnu: emacs-undo-propose-el: Update to 3.0.0-3.f80baee.
...
* gnu/packages/emacs-xyz.scm (emacs-undo-propose-el): Update to 3.0.0-3.f80baee.
2019-10-06 20:18:39 +02:00
1017ba7dd5
gnu: emacs-evil-mc: Update to 0.0.3-2.1cabb86.
...
* gnu/packages/emacs-xyz.scm (emacs-evil-mc): Update to 0.0.3-2.1cabb86.
2019-10-06 19:59:05 +02:00
cec23736d3
gnu: Add cl-goject-introspection.
...
* gnu/packages/lisp.scm (cl-goject-introspection,
sbcl-cl-gobject-introspection): New variables.
2019-10-06 19:34:13 +02:00
1714edc3d4
gnu: WebKitGTK: Embed absolute file name of libWPEBackend-fdo-1.0.so.
...
Fixes <https://bugs.gnu.org/37545 >.
Reported by Vagrant Cascadian <vagrant@debian.org>.
* gnu/packages/webkit.scm (webkitgtk)[arguments]: Add phase.
2019-10-06 18:02:48 +02:00
c5ceec4150
gnu: linux-libre: Remove glibc from CPATH before the build.
...
Fixes <https://bugs.gnu.org/37593 >.
* gnu/packages/linux.scm (make-linux-libre*)[arguments]: Drop "libc" from CPATH.
2019-10-06 18:02:48 +02:00
dd69897113
gnu: linux-libre: Try to aggressively gather entropy during boot.
...
Fixes <https://bugs.gnu.org/37501 >.
* gnu/packages/patches/linux-libre-active-entropy.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (linux-libre-5.2-source): Use it.
2019-10-06 18:02:48 +02:00
5157edd885
gnu: perf: Treat kernel headers as system headers.
...
* gnu/packages/linux.scm (perf)[arguments]: Instead of disabling -Werror,
set C_INCLUDE_PATH.
2019-10-06 18:02:48 +02:00
63b0ce391f
services: shepherd: Compile service files.
...
This reduces resident memory for PID 1 from 29.8MiB to 28.7MiB right
after boot on a bare-bones system (x86_64-linux).
* gnu/services/shepherd.scm (scm->go): New procedure.
(shepherd-configuration-file)[config]: Call it and use 'load-compiled'
instead of 'primitive-load'.
2019-10-06 14:45:35 +02:00
38b1ea0434
services: udev: Explicitly depend on (gnu build linux-boot).
...
* gnu/services/base.scm (udev-shepherd-service): Wrap 'start' method in
'with-imported-modules'.
2019-10-06 14:45:35 +02:00
62c2217570
services: agetty: Explicitly depend on (gnu build linux-boot).
...
* gnu/services/base.scm (default-serial-port): Wrap in
'with-imported-modules'.
2019-10-06 14:45:35 +02:00
1994422752
system: Add 'mount' and 'umount' to '%setuid-programs'.
...
Fixes <https://bugs.gnu.org/37569 >.
Reported by Diego Nicola Barbato <dnbarbato@posteo.de>.
* gnu/system.scm (%setuid-programs): Add "mount" and "umount" from
util-linux.
2019-10-06 14:45:35 +02:00
5a65fede0b
gnu: Add cl-random-forest.
...
* gnu/packages/machine-learning.scm (sbcl-cl-random-forest, cl-random-forest,
ecl-cl-random-forest): New variables.
2019-10-06 14:37:54 +02:00
7a15aab836
gnu: Add cl-online-learning.
...
* gnu/packages/machine-learning.scm (sbcl-cl-online-learning,
cl-online-learning, ecl-cl-online-learning): New variables.
2019-10-06 14:28:55 +02:00
6e76087223
gnu: Add cl-libsvm-format.
...
* gnu/packages/machine-learning.scm (sbcl-cl-libsvm-format, cl-libsvm-format,
ecl-cl-libsvm-format): New variables.
2019-10-06 14:28:55 +02:00
2601da0523
gnu: Add cl-store.
...
* gnu/packages/lisp.scm (sbcl-cl-store, cl-store, ecl-cl-store): New
variables.
2019-10-06 14:28:51 +02:00
7273b3b2a6
gnu: sbcl-hu.dwim.asdf: Update to 20190521.
...
* gnu/packages/lisp.scm (sbcl-hu.dwim.asdf): Update to 20190521.
[uri]: Fetch more recent version from Quicklisp.
2019-10-06 14:19:03 +02:00
f65f713846
gnu: sbcl-alexandria: Update to 1.0.0.
...
* gnu/packages/lisp.scm (sbcl-alexandria): Update to 1.0.0.
[native-inputs]: Add rt.
2019-10-06 14:19:03 +02:00
fd0f8860ec
gnu: ecl: Do not compile the deprecated MIT-RT.
...
Compiling the rt bundled with ECL prevents the ecl-rt package from compiling
properly, as ECL thinks it has already been compiled.
* gnu/packages/lisp.scm (ecl)[arguments]: Add '--without-rt' to
'configure-flags'.
2019-10-06 14:19:03 +02:00
d3287fc157
gnu: Add chanl.
...
* gnu/packages/lisp.scm (sbcl-chanl, cl-chanl, ecl-chanl): New variables.
2019-10-06 14:19:03 +02:00
d24d980e8e
gnu: Remove rust-clippy.
...
This was added by accident in 14f3a7e373
2019-10-06 14:38:02 +03:00
aa64198492
gnu: endless-sky: Update to 0.9.10.
...
* gnu/packages/games.scm (endless-sky): Update to 0.9.10.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-10-06 11:58:02 +03:00
e7f6d13722
gnu: zabbix: Update to 4.2.7.
...
* gnu/packages/monitoring.scm: (zabbix) Update to 4.2.7.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-10-06 11:51:16 +03:00
1e8826bdd3
gnu: Update python-pastel to 0.1.1.
...
* gnu/packages/graphics.scm (python-pastel): Update to 0.1.1.
[arguments]: Add custom 'check phase.
[description]: Simplify description.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-10-06 11:46:21 +03:00
6792908d6d
gnu: waybar: Update to 0.8.0.
...
* gnu/packages/wm.scm (waybar): Update to 0.8.0.
2019-10-06 11:05:27 +03:00
5a54baf67c
gnu: r-data-table: Update to 1.12.4.
...
* gnu/packages/statistics.scm (r-data-table): Update to 1.12.4.
[inputs]: Add zlib.
2019-10-06 04:46:54 +02:00
011ec062f3
gnu: python-mnemonic: Update to 0.19.
...
* gnu/packages/finance.scm (python-mnemonic): Update to 0.19.
2019-10-06 04:46:54 +02:00
ef10cbb41f
gnu: r-gamlss-dist: Update to 5.1-5.
...
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.1-5.
2019-10-06 04:46:54 +02:00
ac5e205a3c
gnu: python-traitlets: Update to 4.3.3.
...
* gnu/packages/python-xyz.scm (python-traitlets): Update to 4.3.3.
2019-10-06 04:46:54 +02:00
44805ca503
gnu: r-pegas: Update to 0.12.
...
* gnu/packages/cran.scm (r-pegas): Update to 0.12.
2019-10-06 04:46:53 +02:00
12a66af6b0
gnu: rust-miniz-oxide: Update to 0.3.3.
...
* gnu/packages/crates-io.scm (rust-miniz-oxide): Update to 0.3.3.
2019-10-06 04:46:53 +02:00
79e3e6a5c0
gnu: rust-openssl-sys: Update to 0.9.50.
...
* gnu/packages/crates-io.scm (rust-openssl-sys): Update to 0.9.50.
2019-10-06 04:46:53 +02:00
11820827d0
gnu: r-polspline: Update to 1.1.16.
...
* gnu/packages/cran.scm (r-polspline): Update to 1.1.16.
2019-10-06 04:46:53 +02:00
d71bbfea54
gnu: perl-test-tcp: Update to 2.21.
...
* gnu/packages/web.scm (perl-test-tcp): Update to 2.21.
2019-10-06 04:46:53 +02:00
5d7e1c807d
gnu: perl-test-mockobject: Update to 1.20191002.
...
* gnu/packages/perl-check.scm (perl-test-mockobject): Update to 1.20191002.
2019-10-06 04:46:53 +02:00
5327fbb391
gnu: lua-luv: Update to 1.30.1-1.
...
* gnu/packages/lua.scm (lua-luv): Update to 1.30.1-1.
2019-10-06 04:46:53 +02:00
3acd85ac30
gnu: lua-libmpack: Update to 1.0.8.
...
* gnu/packages/serialization.scm (lua-libmpack): Update to 1.0.8.
2019-10-06 04:46:52 +02:00
d1b0e1fd6d
gnu: perl-html-form: Update to 6.05.
...
* gnu/packages/web.scm (perl-html-form): Update to 6.05.
2019-10-06 04:46:52 +02:00
1e9b956e41
gnu: quaternion: Update to 0.0.9.4c.
...
* gnu/packages/messaging.scm (quaternion): Update to 0.0.9.4c.
2019-10-06 04:46:52 +02:00
0395c53359
gnu: libqmatrixclient: Update to 0.5.2.
...
* gnu/packages/messaging.scm (libqmatrixclient): Update to 0.5.2.
2019-10-06 04:46:52 +02:00
9fde2268bc
gnu: lua-libmpack: Don't use unstable tarball.
...
* gnu/packages/serialization.scm (lua-libmpack)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-10-06 04:46:52 +02:00
d7885bbf07
gnu: libmpack: Don't use unstable tarball.
...
* gnu/packages/serialization.scm (libmpack)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
(lua-libmpack)[arguments]: Adjust ‘unpack-mpack-sources’ phase.
2019-10-06 04:46:52 +02:00
32faec65aa
gnu: emacs-org-tanglesync: Update to 0.6-2.d99181f.
...
* gnu/packages/emacs-xyz.scm (emacs-org-tanglesync): Update to 0.6-2.d99181f.
2019-10-05 23:22:13 +02:00
1e6e526e0c
gnu: ocaml-utop: Update to 2.4.2.
...
* gnu/packages/ocaml.scm (ocaml-utop): Update to 2.4.2.
2019-10-05 22:23:43 +02:00
9e560c185c
gnu: ocaml-qcheck: Update to 0.11.
...
* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.11.
2019-10-05 22:23:42 +02:00
07c1a10ef6
gnu: axoloti-runtime: Don't use unstable tarball.
...
* gnu/packages/axoloti.scm (axoloti-runtime)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
(axoloti-patcher)[arguments]: Add ‘make-git-checkout-writable’ phase.
2019-10-05 22:23:42 +02:00
81bc4533aa
services: urandom-seed: Credit the entropy added to the PRNG.
...
Partly fixes <https://bugs.gnu.org/37501 >.
Reported by Marius Bakke <mbakke@fastmail.com>.
* gnu/services/base.scm (urandom-seed-shepherd-service): In 'start'
method, add calls to 'add-to-entropy-count'.
2019-10-05 22:05:02 +02:00
d2fd037fd0
gnu: libxls: Update to 1.5.1.
...
* gnu/packages/statistics.scm (libxls): Update to 1.5.1.
2019-10-05 20:59:00 +02:00
992f2069d5
gnu: gmime: Update to 3.2.4.
...
* gnu/packages/mail.scm (gmime): Update to 3.2.4.
2019-10-05 20:59:00 +02:00
567b223d01
gnu: r-wgaim: Update to 2.0-1.
...
* gnu/packages/cran.scm (r-wgaim): Update to 2.0-1.
2019-10-05 20:00:51 +02:00
8c3fd490d5
gnu: nano: Update to 4.5.
...
* gnu/packages/nano.scm (nano): Update to 4.5.
2019-10-05 20:00:51 +02:00
ecfd74e5f7
gnu: emacs-eros: Update to 0.0.1-2.dd89102.
...
* gnu/packages/emacs-xyz.scm (emacs-eros): Update to 0.0.1-2.dd89102.
2019-10-05 19:11:23 +02:00
f561d7774c
gnu: emacs-handle: Update to 0.1-2.51c050b.
...
* gnu/packages/emacs-xyz.scm (emacs-handle): Update to 0.1-2.51c050b.
2019-10-05 19:11:19 +02:00
6760b26330
gnu: guix-data-service: Update to 0.0.1-3.8019d2e.
...
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-3.8019d2e.
2019-10-05 11:18:10 +01:00
c11caf2060
gnu: cryptsetup: Update to 2.2.1.
...
* gnu/packages/cryptsetup.scm (cryptsetup): Update to 2.2.1.
[arguments]: Add #:configure-flags.
[native-inputs]: Remove python & add pkg-config.
[inputs]: Add argon2 & json-c.
(cryptsetup-static): Disable new binaries. Keep using libgcrypt.
Disable blkid support.
[inputs]: Add json-c.
2019-10-05 11:59:50 +02:00
b5c84b8a37
gnu: cryptsetup-static: Don't build veritysetup.
...
* gnu/packages/cryptsetup.scm (cryptsetup-static)[arguments]: Pass
‘--disable-veritysetup’ #:configure-flag. Adjust ‘remove-cruft’ phase.
2019-10-05 11:59:49 +02:00
d5e445e1d5
gnu: cryptsetup: Don't use NAME in source URI.
...
* gnu/packages/cryptsetup.scm (cryptsetup)[source]: Hard-code NAME.
2019-10-05 11:59:49 +02:00
9dbda847af
gnu: screenfetch: Use the tagged release.
...
* gnu/packages/admin.scm (screenfetch): Use the new 3.9.0 release tag
instead of a (functionally identical) naked commit.
2019-10-05 11:59:49 +02:00
4d755996a7
gnu: python-pytest-checkdocs: Update to 1.2.2.
...
* gnu/packages/python-check.scm (python-pytest-checkdocs): Update to 1.2.2.
[propagated-inputs]: Add python-more-itertools.
2019-10-05 11:59:49 +02:00
0af697d940
gnu: python-importlib-metadata: Update to 0.23.
...
* gnu/packages/python-xyz.scm (python-importlib-metadata): Update to 0.23.
2019-10-05 11:59:49 +02:00
3dbc41c042
gnu: next: Update to 1.3.4.
...
* gnu/packages/web-browsers.scm (next-gtk-webkit): Update to 1.3.4.
2019-10-05 09:54:57 +02:00
3a69dd5c15
services: httpd: Fix virtual-host doc and config.
...
* doc/guix.texi (Web Services): Fix httpd-virtualhost examples.
* gnu/services/web.scm (httpd-process-extensions): Add missing newline
separator.
2019-10-04 17:10:58 +02:00
0c3cf62829
gnu: Add emacs-extempore-mode.
...
* gnu/packages/emacs-xyz.scm (emacs-extempore-mode): New variable.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-10-04 17:04:38 +02:00
4b3b5a06fc
gnu: rust-unindent: Update to 0.1.5.
...
* gnu/packages/crates-io.scm (rust-unindent): Update to 0.1.5.
2019-10-04 17:04:38 +02:00
59b83c5029
gnu: Add xfce4-weather-plugin.
...
* gnu/packages/xfce.scm (xfce4-weather-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:31:39 +02:00
5d0059e02e
gnu: Add xfce4-places-plugin.
...
* gnu/packages/xfce.scm (xfce4-places-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:31:30 +02:00
cd0826d60b
gnu: Add xfce4-equake-plugin.
...
* gnu/packages/xfce.scm (xfce4-equake-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:31:20 +02:00
dd249f1b8c
gnu: Add xfce4-mailwatch-plugin.
...
* gnu/packages/xfce.scm (xfce4-mailwatch-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:31:06 +02:00
de838a6338
gnu: Add xfce4-statusnotifier-plugin.
...
* gnu/packages/xfce.scm (xfce4-statusnotifier-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:30:58 +02:00
b05edff0b2
gnu: Add xfce4-stopwatch-plugin.
...
* gnu/packages/xfce.scm (xfce4-stopwatch-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:30:50 +02:00
d6056cc7fe
gnu: Add xfce4-netload-plugin.
...
* gnu/packages/xfce.scm (xfce4-netload-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:30:41 +02:00
e18bc5e011
gnu: Add xfce4-kbdleds-plugin.
...
* gnu/packages/xfce.scm (xfce4-kbdleds-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:30:32 +02:00
40f0181bf7
gnu: Add xfce4-genmon-plugin.
...
* gnu/packages/xfce.scm (xfce4-genmon-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:30:23 +02:00
3b04836ebb
gnu: Add xfce4-time-out-plugin.
...
* gnu/packages/xfce.scm (xfce4-time-out-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:30:14 +02:00
a004609a13
gnu: Add xfce4-mpc-plugin.
...
* gnu/packages/xfce.scm (xfce4-mpc-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:30:04 +02:00
2aee1fef0b
gnu: Add xfce4-fsguard-plugin.
...
* gnu/packages/xfce.scm (xfce4-fsguard-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:29:53 +02:00
fa6a9d9863
gnu: Add xfce4-diskperf-plugin.
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* gnu/packages/xfce.scm (xfce4-diskperf-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:29:44 +02:00
18af33827b
gnu: Add xfce4-cpufreq-plugin.
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* gnu/packages/xfce.scm (xfce4-cpufreq-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:29:34 +02:00
2f81e67850
gnu: Add xfce4-calculator-plugin.
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* gnu/packages/xfce.scm (xfce4-calculator-plugin): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-10-04 14:28:48 +02:00
Ricardo Wurmus