1f94bff2d4
gnu: cutadapt: Update to 1.12.
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* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.12.
[inputs]: Add python-xopen.
2016-12-19 20:33:32 +01:00
361a2fcf8d
gnu: Add python-xopen.
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* gnu/packages/python.scm (python-xopen, python2-xopen): New variables.
2016-12-19 20:33:31 +01:00
565775399e
gnu: linux-libre: Update to 4.8.15.
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* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.15.
2016-12-19 14:07:27 -05:00
9cedffe5db
Revert "gnu: linux-libre: Update to 4.9."
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This reverts commit 5a3849443ahttps://bugs.gnu.org/25231 >.
2016-12-19 14:03:41 -05:00
834d12226b
gnu: kdbusaddons: Embed kinit store dir, avoid dependency cycles.
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kdbusaddons needs to know the location of the kdeinit5 executable,
provided by kinit. kinit depends on kdbusaddons, so we add bootstrap
versions of all packages in the dependency chain from kinit to
kdbusaddons to avoid cyclic dependencies.
* gnu/packages/kde-frameworks.scm (kinit-bootstrap,
kdbusaddons-bootstrap): New variables.
(kdbusaddons)[inputs]: Add kinit-bootstrap.
[source,arguments]: Add patch and substitution to embed
kinit-bootstrap's store directory in the code.
* gnu/packages/patches/kdbusaddons-kinit-file-name.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-19 17:51:00 +01:00
d343a60f93
gexp: Slightly simplify 'gexp-inputs'.
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* guix/gexp.scm (gexp-inputs)[add-reference-inputs]: Remove unneeded
'if' in the non-native nested gexp case.
2016-12-19 17:51:00 +01:00
5b14a7902c
gexp: Native inputs of nested gexps are properly accounted for.
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Previously, 'gexp-native-inputs' would not return the native inputs of
nested gexps. For example, this:
(gexp-native-inputs #~(foo #$#~(bar #+coreutils)))
would return '().
* guix/gexp.scm (gexp-inputs)[add-reference-inputs]: In the
non-recursive cases, check whether N? and NATIVE? are the same, and act
accordingly.
[native-input?]: Remove.
Fold over all of (gexp-references exp).
* tests/gexp.scm ("ungexp + ungexp-native, nested, special mixture"):
New test.
* tests/gexp.scm ("input list splicing + ungexp-native-splicing"): Pass
#:native? #t to 'gexp-input'.
2016-12-19 17:51:00 +01:00
9fc037fe10
services: Use 'file-append' in more places.
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* gnu/services/avahi.scm (avahi-shepherd-service): Use #$(file-append x y)
instead of (string-append #$x y).
* gnu/services/base.scm (unicode-start)
(console-keymap-service-type, console-font-shepherd-services)
(mingetty-shepherd-service, nscd-shepherd-service)
(hydra-key-authorization, guix-shepherd-service)
(guix-publish-shepherd-service, udev-shepherd-service)
(gpm-shepherd-service, <kmscon-configuration>)
(kmscon-service-type): Likewise.
* gnu/services/shepherd.scm (shepherd-boot-gexp): Likewise.
2016-12-19 17:51:00 +01:00
9b06f503f4
doc: Mention 'grub' field of 'grub-configuration'.
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* doc/guix.texi (GRUB Configuration): Add 'grub' field.
2016-12-19 17:51:00 +01:00
7fcf2a0b94
doc: Make 'guix pull' more visible.
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Suggested by Dave Love <fx@gnu.org>.
Fixes <http://bugs.gnu.org/25139 >.
* doc/guix.texi (Installation): Mention 'guix pull'.
(Proceeding with the Installation): Mention updates with 'guix pull' and
'guix system reconfigure'.
(Invoking guix pull): Add "updating" to the concept index.
2016-12-19 17:51:00 +01:00
b2ff76a010
doc: Mention 'swapon'.
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Suggested by David Braun <Guix-box@snkmail.com>
at <https://lists.gnu.org/archive/html/guix-devel/2016-12/msg00744.html >.
* doc/guix.texi (Preparing for Installation): Add 'swapon'.
2016-12-19 17:51:00 +01:00
43686dcb2f
gnu: openssh: Update to 7.4p1.
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* gnu/packages/ssh.scm (openssh): Update to 7.4p1.
[source]: Remove 'openssh-memory-exhaustion.patch'.
* gnu/packages/patches/openssh-memory-exhaustion.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-19 10:54:11 -05:00
307349f6f7
gnu: samba: Update to 4.5.3 [fixes CVE-2016-{2123,2125,2126}].
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* gnu/packages/samba.scm (samba): Update to 4.5.3.
2016-12-19 09:50:02 -05:00
11356d2632
nls: Update 'fr' translation.
2016-12-19 14:39:34 +01:00
42539a8409
nls: Update 'da' package translation.
2016-12-19 14:38:25 +01:00
452ce94989
nls: Update 'pt_BR' translation.
2016-12-19 14:37:40 +01:00
072ec4cf09
nls: Update 'da' translation.
2016-12-19 14:36:50 +01:00
94a84d8367
gnu: pcsc-lite: Update to 1.8.19.
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* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.19.
2016-12-19 14:27:33 +01:00
be6a70edc2
gnu: hurd-headers: Update to 0.9.
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* gnu/packages/hurd.scm (hurd-headers): Update to version 0.9.
2016-12-19 12:04:48 +02:00
9c9402be2e
gnu: mig: Update to 1.8.
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* gnu/packages/hurd.scm (mig): Update to version 1.8.
2016-12-19 12:04:43 +02:00
d950f03848
gnu: gnumach-headers: Update to 1.8.
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* gnu/packages/hurd.scm (gnumach-headers): Update to version 1.8.
2016-12-19 12:04:21 +02:00
5f80054053
gnu: gnuplot: Update to 5.0.5.
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* gnu/packages/maths.scm (gnuplot): Update to 5.0.5.
2016-12-18 23:27:43 -05:00
5a2604bfb6
gnu: wxmaxima: Update to 16.12.0.
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* gnu/packages/maths.scm (wxmaxima): Update to 16.12.0.
2016-12-18 14:05:40 -05:00
55b2756906
gnu: tor: split description into two parts for easier reading.
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* gnu/packages/tor.scm (tor)[description]: Split it.
2016-12-18 13:00:11 -05:00
4a652c78d4
gnu: maxima: Update to 5.39.0.
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* gnu/packages/maths.scm (maxima): Update to 5.39.0.
2016-12-18 12:57:09 -05:00
5a5fc61f07
build: Fix .service and .conf targets for VPATH builds.
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* nix/local.mk (etc/guix-%.service, etc/guix-%.conf): Use "$<", not
"$(srcdir)/$<".
2016-12-18 17:45:44 +01:00
fa54f44bb7
build: Add 'guix-publish.*.in' to the distribution.
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This is a followup to 332d7903f5
2016-12-18 17:45:44 +01:00
9ea36197be
doc: Mention the d3.js backend of 'guix graph'.
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* doc/guix.texi (Invoking guix graph): Mention the d3.js backend.
2016-12-18 17:45:44 +01:00
1ec34dd7e6
doc: Document 'cargo-build-system'.
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* doc/guix.texi (Build Systems): Add 'cargo-build-system'.
2016-12-18 17:45:44 +01:00
0599416520
gnu: mumble: Update to 1.2.18.
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* gnu/packages/telephony.scm (mumble): Update to 1.2.18.
2016-12-18 16:53:21 +01:00
00e0ca7ccb
gnu: python-docutils: Update to 0.13.1
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* gnu/packages/python.scm(python-docutils): Update to 0.13.1.
[source]: Use pypi-uri.
2016-12-18 16:31:35 +01:00
662a1aa6b0
tests: Mock up http-fetch.
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This is a follow-up to commit 63773200d7
2016-12-18 13:39:21 +01:00
e69c1a5446
tests: Adjust cpan tests.
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This is a follow-up to commit ff55fe5599
2016-12-18 13:39:20 +01:00
866872aa71
linux-initrd: Support FAT filesystems.
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* gnu/system/linux-initrd.scm (base-initrd): When a FAT filesystem is
present: Add fatfsck/static in 'helper-packages'; and add nls_iso8859-1
in 'linux-modules'.
2016-12-18 13:18:47 +01:00
8a4c988892
build: check-final-inputs-self-contained has an exception for 'bash:include'.
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Currently 'bash:include' of the final Bash depends on bootstrap stuff.
* build-aux/check-final-inputs-self-contained.scm (final-inputs): Add
clause for 'bash:include'.
* gnu/packages/commencement.scm (bash-final): Add FIXME comment.
2016-12-18 12:37:26 +01:00
5073ecf055
gnu: yoshimi: Update to 1.5.0.
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* gnu/packages/music.scm (yoshimi): Update to 1.5.0.
2016-12-18 12:00:33 +01:00
239f46325d
tests: Mock up http-fetch in import test.
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This is a follow-up to commit 63773200d7
2016-12-18 10:54:11 +01:00
36a318adc7
gnu: emacs-org: Update to 20161214.
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* gnu/packages/emacs.scm (emacs-org): Update to 20161214.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2016-12-18 17:05:45 +08:00
506abddb99
tests: Mock up http-fetch in import tests.
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This is a follow-up to commit 63773200d7
2016-12-18 09:55:17 +01:00
51d8395ac6
gnu: youtube-dl: Update to 2016.12.15.
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* gnu/packages/video.scm (youtube-dl): Update to 2016.12.15.
2016-12-17 20:27:21 -05:00
a1814e4a27
gnu: r: Update to 3.3.2.
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* gnu/packages/statistics.scm (r): Update to 3.3.2.
2016-12-18 10:02:52 +10:00
3fffabce2a
gnu: Add attribution line for Raoul Bonnal.
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This is a follow-up commit to c9e9154e99
2016-12-18 10:01:04 +10:00
a32d0c8304
gnu: sane-backends: Remove timestamps from the output.
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* gnu/packages/scanner.scm (sane-backends-minimal)[source](modules, snippet):
New fields.
2016-12-17 23:13:05 +01:00
4c92874328
gnu: Add and use sane-backends.
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* gnu/packages/scanner.scm (sane-backends): New variable.
* gnu/packages/gnome.scm (colord, simple-scan): Use it instead of
'sane-backends-minimal'.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/wine.scm (wine): Likewise.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-17 23:13:05 +01:00
32aa37a2e7
gnu: Add and use sane-backends-minimal.
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* gnu/packages/scanner.scm (sane-backends): Rename to...
(sane-backends-minimal): this. Adjust name, source, synopsis and
description accordingly.
* gnu/packages/cups.scm (hplip): Use 'sane-backends-minimal' instead of
'sane-backends'.
* gnu/packages/gnome.scm (colord, simple-scan): Likewise.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/wine.scm (wine): Likewise.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-17 23:13:04 +01:00
33a14e29f9
gnu: sane-backends: Disable backend generation.
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* gnu/packages/scanner.scm (sane-backends)[arguments]: Add a phase to
disable the compilation of backends.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-17 23:13:04 +01:00
9b1d77f6d4
gnu: pinentry: Update to 1.0.0.
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* gnu/packages/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-gnome3,
pinentry-qt): Update to 1.0.0.
2016-12-17 13:40:42 -05:00
402efb61d3
gnu: npth: Update to 1.3.
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* gnu/packages/gnupg.scm (npth): Update to 1.3.
2016-12-17 13:40:42 -05:00
fdbc84b056
import cran: Handle HTTP errors.
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Fixes <http://bugs.gnu.org/23479 >.
* guix/import/cran.scm (fetch-description): Return #f in case of HTTP
errors.
2016-12-17 19:13:42 +01:00
d68ba5f483
guix import: Print list of expressions.
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* guix/scripts/import.scm (guix-import): Print list of expressions.
2016-12-17 19:13:41 +01:00
Tobias Geerinckx-Rice