3053 lines
119 KiB
Scheme
3053 lines
119 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
||
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org>
|
||
;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
|
||
;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com>
|
||
;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org>
|
||
;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org>
|
||
;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
|
||
;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
|
||
;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
|
||
;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
|
||
;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
|
||
;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
|
||
;;; Copyright © 2015, 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
|
||
;;; Copyright © 2016, 2017 Nils Gillmann <ng0@n0.is>
|
||
;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org>
|
||
;;; Copyright © 2016 David Craven <david@craven.ch>
|
||
;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
|
||
;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca>
|
||
;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
|
||
;;; Copyright © 2016, 2017, 2018 Marius Bakke <mbakke@fastmail.com>
|
||
;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
|
||
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
|
||
;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
|
||
;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
|
||
;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
|
||
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
|
||
;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com>
|
||
;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
|
||
;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
|
||
;;; Copyright © 2017, 2018 Pierre Langlois <pierre.langlois@gmx.com>
|
||
;;; Copyright © 2015, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
|
||
;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
|
||
;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
|
||
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
|
||
;;;
|
||
;;; This file is part of GNU Guix.
|
||
;;;
|
||
;;; GNU Guix is free software; you can redistribute it and/or modify it
|
||
;;; under the terms of the GNU General Public License as published by
|
||
;;; the Free Software Foundation; either version 3 of the License, or (at
|
||
;;; your option) any later version.
|
||
;;;
|
||
;;; GNU Guix is distributed in the hope that it will be useful, but
|
||
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
|
||
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||
;;; GNU General Public License for more details.
|
||
;;;
|
||
;;; You should have received a copy of the GNU General Public License
|
||
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
|
||
|
||
(define-module (gnu packages databases)
|
||
#:use-module (gnu packages)
|
||
#:use-module (gnu packages admin)
|
||
#:use-module (gnu packages algebra)
|
||
#:use-module (gnu packages autotools)
|
||
#:use-module (gnu packages avahi)
|
||
#:use-module (gnu packages base)
|
||
#:use-module (gnu packages bash)
|
||
#:use-module (gnu packages bison)
|
||
#:use-module (gnu packages boost)
|
||
#:use-module (gnu packages check)
|
||
#:use-module (gnu packages cmake)
|
||
#:use-module (gnu packages compression)
|
||
#:use-module (gnu packages crypto)
|
||
#:use-module (gnu packages curl)
|
||
#:use-module (gnu packages cyrus-sasl)
|
||
#:use-module (gnu packages emacs)
|
||
#:use-module (gnu packages gettext)
|
||
#:use-module (gnu packages glib)
|
||
#:use-module (gnu packages gnupg)
|
||
#:use-module (gnu packages guile)
|
||
#:use-module (gnu packages time)
|
||
#:use-module (gnu packages golang)
|
||
#:use-module (gnu packages jemalloc)
|
||
#:use-module (gnu packages language)
|
||
#:use-module (gnu packages libevent)
|
||
#:use-module (gnu packages linux)
|
||
#:use-module (gnu packages man)
|
||
#:use-module (gnu packages ncurses)
|
||
#:use-module (gnu packages parallel)
|
||
#:use-module (gnu packages pcre)
|
||
#:use-module (gnu packages perl)
|
||
#:use-module (gnu packages perl-check)
|
||
#:use-module (gnu packages pkg-config)
|
||
#:use-module (gnu packages popt)
|
||
#:use-module (gnu packages python)
|
||
#:use-module (gnu packages python-crypto)
|
||
#:use-module (gnu packages rdf)
|
||
#:use-module (gnu packages readline)
|
||
#:use-module (gnu packages ruby)
|
||
#:use-module (gnu packages serialization)
|
||
#:use-module (gnu packages statistics)
|
||
#:use-module (gnu packages tcl)
|
||
#:use-module (gnu packages terminals)
|
||
#:use-module (gnu packages textutils)
|
||
#:use-module (gnu packages tls)
|
||
#:use-module (gnu packages valgrind)
|
||
#:use-module (gnu packages web)
|
||
#:use-module (gnu packages xml)
|
||
#:use-module ((guix licenses) #:prefix license:)
|
||
#:use-module (guix packages)
|
||
#:use-module (guix download)
|
||
#:use-module (guix git-download)
|
||
#:use-module (guix build-system gnu)
|
||
#:use-module (guix build-system go)
|
||
#:use-module (guix build-system perl)
|
||
#:use-module (guix build-system python)
|
||
#:use-module (guix build-system ruby)
|
||
#:use-module (guix build-system cmake)
|
||
#:use-module (guix build-system r)
|
||
#:use-module (guix build-system scons)
|
||
#:use-module ((guix build utils) #:hide (which))
|
||
#:use-module (guix utils)
|
||
#:use-module (srfi srfi-1)
|
||
#:use-module (srfi srfi-26)
|
||
#:use-module (ice-9 match))
|
||
|
||
(define-public 4store
|
||
(package
|
||
(name "4store")
|
||
(version "1.1.6")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/4store/4store/archive/v"
|
||
version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32 "004fmcf1w75zhc1x3zc6kc97j4jqn2v5nhk6yb3z3cpfrhzi9j50"))
|
||
(patches (search-patches "4store-unset-preprocessor-directive.patch"
|
||
"4store-fix-buildsystem.patch"))))
|
||
(build-system gnu-build-system)
|
||
(native-inputs
|
||
`(("perl" ,perl)
|
||
("python" ,python-2)
|
||
("autoconf" ,autoconf)
|
||
("automake" ,automake)
|
||
("gettext" ,gettext-minimal)
|
||
("libtool" ,libtool)
|
||
("pcre" ,pcre "bin") ;for 'pcre-config'
|
||
("pkg-config" ,pkg-config)))
|
||
(inputs
|
||
`(("glib" ,glib)
|
||
("rasqal" ,rasqal)
|
||
("libxml2" ,libxml2)
|
||
("raptor2" ,raptor2)
|
||
("readline" ,readline)
|
||
("avahi" ,avahi)
|
||
("cyrus-sasl" ,cyrus-sasl)
|
||
("openssl" ,openssl)
|
||
("util-linux" ,util-linux)))
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'generate-configure
|
||
(lambda _
|
||
(zero? (system* "sh" "autogen.sh")))))))
|
||
;; http://www.4store.org has been down for a while now.
|
||
(home-page "https://github.com/4store/4store")
|
||
(synopsis "Clustered RDF storage and query engine")
|
||
(description "4store is a RDF/SPARQL store written in C, supporting
|
||
either single machines or networked clusters.")
|
||
(license license:gpl3+)))
|
||
|
||
(define-public gdbm
|
||
(package
|
||
(name "gdbm")
|
||
(version "1.18")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://gnu/gdbm/gdbm-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1kimnv12bzjjhaqk4c8w2j6chdj9c6bg21lchaf7abcyfss2r0mq"))))
|
||
(arguments `(#:configure-flags '("--enable-libgdbm-compat")))
|
||
(build-system gnu-build-system)
|
||
(home-page "http://www.gnu.org.ua/software/gdbm")
|
||
(synopsis
|
||
"Hash library of database functions compatible with traditional dbm")
|
||
(description
|
||
"GDBM is a library for manipulating hashed databases. It is used to
|
||
store key/value pairs in a file in a manner similar to the Unix dbm library
|
||
and provides interfaces to the traditional file format.")
|
||
(license license:gpl3+)))
|
||
|
||
(define-public go-gopkg.in-mgo.v2
|
||
(package
|
||
(name "go-gopkg.in-mgo.v2")
|
||
(version "2016.08.01")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/go-mgo/mgo")
|
||
(commit (string-append "r" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"0rwbi1z63w43b0z9srm8m7iz1fdwx7bq7n2mz862d6liiaqa59jd"))))
|
||
(build-system go-build-system)
|
||
(arguments
|
||
`(#:import-path "gopkg.in/mgo.v2"
|
||
;; TODO: The tests fail as MongoDB fails to start
|
||
;; Error parsing command line: unrecognised option '--chunkSize'
|
||
#:tests? #f
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'reset-gzip-timestamps)
|
||
(add-before 'check 'start-mongodb
|
||
(lambda* (#:key tests? #:allow-other-keys)
|
||
(or (not tests?)
|
||
(with-directory-excursion "src/gopkg.in/mgo.v2"
|
||
(invoke "make" "startdb")))))
|
||
(add-after 'check 'stop'mongodb
|
||
(lambda* (#:key tests? #:allow-other-keys)
|
||
(or (not tests?)
|
||
(with-directory-excursion "src/gopkg.in/mgo.v2"
|
||
(invoke "make" "stopdb"))))))))
|
||
(native-inputs
|
||
`(("go-gopkg.in-check.v1" ,go-gopkg.in-check.v1)
|
||
("mongodb" ,mongodb)
|
||
("daemontools" ,daemontools)))
|
||
(synopsis "@code{mgo} offers a rich MongoDB driver for Go.")
|
||
(description
|
||
"@code{mgo} (pronounced as mango) is a MongoDB driver for the Go language.
|
||
It implements a rich selection of features under a simple API following
|
||
standard Go idioms.")
|
||
(home-page "http://labix.org/mgo")
|
||
(license license:bsd-2)))
|
||
|
||
(define-public bdb
|
||
(package
|
||
(name "bdb")
|
||
(version "6.2.32")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://download.oracle.com/berkeley-db/db-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1yx8wzhch5wwh016nh0kfxvknjkafv6ybkqh6nh7lxx50jqf5id9"))))
|
||
(build-system gnu-build-system)
|
||
(outputs '("out" ; programs, libraries, headers
|
||
"doc")) ; 94 MiB of HTML docs
|
||
(arguments
|
||
'(#:tests? #f ; no check target available
|
||
#:disallowed-references ("doc")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(replace 'configure
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let ((out (assoc-ref outputs "out"))
|
||
(doc (assoc-ref outputs "doc")))
|
||
;; '--docdir' is not honored, so we need to patch.
|
||
(substitute* "dist/Makefile.in"
|
||
(("docdir[[:blank:]]*=.*")
|
||
(string-append "docdir = " doc "/share/doc/bdb")))
|
||
|
||
(invoke "./dist/configure"
|
||
(string-append "--prefix=" out)
|
||
(string-append "CONFIG_SHELL=" (which "bash"))
|
||
(string-append "SHELL=" (which "bash"))
|
||
|
||
;; Remove 7 MiB of .a files.
|
||
"--disable-static"
|
||
|
||
;; The compatibility mode is needed by some packages,
|
||
;; notably iproute2.
|
||
"--enable-compat185"
|
||
|
||
;; The following flag is needed so that the inclusion
|
||
;; of db_cxx.h into C++ files works; it leads to
|
||
;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
|
||
"--enable-cxx")))))))
|
||
(synopsis "Berkeley database")
|
||
(description
|
||
"Berkeley DB is an embeddable database allowing developers the choice of
|
||
SQL, Key/Value, XML/XQuery or Java Object storage for their data model.")
|
||
;; Starting with version 6, BDB is distributed under AGPL3. Many individual
|
||
;; files are covered by the 3-clause BSD license.
|
||
(license (list license:agpl3+ license:bsd-3))
|
||
(home-page
|
||
"http://www.oracle.com/us/products/database/berkeley-db/overview/index.html")))
|
||
|
||
(define-public bdb-5.3
|
||
(package (inherit bdb)
|
||
(name "bdb")
|
||
(version "5.3.28")
|
||
(license (license:non-copyleft "file://LICENSE"
|
||
"See LICENSE in the distribution."))
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://download.oracle.com/berkeley-db/db-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0a1n5hbl7027fbz5lm0vp0zzfp1hmxnz14wx3zl9563h83br5ag0"))))
|
||
(arguments
|
||
`(#:tests? #f ; no check target available
|
||
#:disallowed-references ("doc")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(replace 'configure
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let ((out (assoc-ref outputs "out"))
|
||
(doc (assoc-ref outputs "doc")))
|
||
;; '--docdir' is not honored, so we need to patch.
|
||
(substitute* "dist/Makefile.in"
|
||
(("docdir[[:blank:]]*=.*")
|
||
(string-append "docdir = " doc "/share/doc/bdb")))
|
||
|
||
(invoke "./dist/configure"
|
||
(string-append "--prefix=" out)
|
||
(string-append "CONFIG_SHELL=" (which "bash"))
|
||
(string-append "SHELL=" (which "bash"))
|
||
|
||
;; Bdb doesn't recognize aarch64 as an architecture.
|
||
,@(if (string=? "aarch64-linux" (%current-system))
|
||
'("--build=aarch64-unknown-linux-gnu")
|
||
'())
|
||
|
||
;; Remove 7 MiB of .a files.
|
||
"--disable-static"
|
||
|
||
;; The compatibility mode is needed by some packages,
|
||
;; notably iproute2.
|
||
"--enable-compat185"
|
||
|
||
;; The following flag is needed so that the inclusion
|
||
;; of db_cxx.h into C++ files works; it leads to
|
||
;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
|
||
"--enable-cxx")))))))))
|
||
|
||
(define-public es-dump-restore
|
||
(package
|
||
(name "es-dump-restore")
|
||
(version "2.1.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (rubygems-uri "es_dump_restore" version))
|
||
(sha256
|
||
(base32
|
||
"020yk7f1hw48clmf5501z3xv9shsdchyymcv0y2cci2c1xvr1mim"))))
|
||
(build-system ruby-build-system)
|
||
(arguments
|
||
'(#:tests? #f)) ;; No testsuite.
|
||
(propagated-inputs
|
||
`(("ruby-httpclient" ,ruby-httpclient)
|
||
("ruby-multi-json" ,ruby-multi-json)
|
||
("ruby-progress_bar" ,ruby-progress_bar)
|
||
("ruby-rubyzip" ,ruby-rubyzip)
|
||
("ruby-thor" ,ruby-thor)))
|
||
(synopsis "Utility for dumping and restoring ElasticSearch indexes")
|
||
(description
|
||
"This package provides a utility for dumping the contents of an
|
||
ElasticSearch index to a compressed file and restoring the dumpfile back to an
|
||
ElasticSearch server")
|
||
(home-page "https://github.com/patientslikeme/es_dump_restore")
|
||
(license license:expat)))
|
||
|
||
(define-public leveldb
|
||
(package
|
||
(name "leveldb")
|
||
(version "1.20")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/google/leveldb"
|
||
"/archive/v" version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0r36bcrj6b2afsp4aw1gjai3jbs1c7734pxpc1jz7hh9nasyiazm"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:make-flags (list "CC=gcc")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure)
|
||
(replace 'install
|
||
;; There is no install target, so we do it here.
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let* ((out (assoc-ref outputs "out"))
|
||
(lib (string-append out "/lib"))
|
||
(include (string-append out "/include")))
|
||
(for-each (lambda (file)
|
||
(install-file file lib))
|
||
(find-files "out-shared" "^libleveldb\\.so.*$"))
|
||
(copy-recursively "include" include)
|
||
#t))))))
|
||
(inputs
|
||
`(("snappy" ,snappy)))
|
||
(home-page "http://leveldb.org/")
|
||
(synopsis "Fast key-value storage library")
|
||
(description
|
||
"LevelDB is a fast key-value storage library that provides an ordered
|
||
mapping from string keys to string values.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public memcached
|
||
(package
|
||
(name "memcached")
|
||
(version "1.5.10")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"https://memcached.org/files/memcached-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0jqw3z0408yx0lzc6ykn4d29n02dk31kqnmq9b3ldmcnpl6hck29"))))
|
||
(build-system gnu-build-system)
|
||
(inputs
|
||
`(("libevent" ,libevent)
|
||
("cyrus-sasl" ,cyrus-sasl)))
|
||
(home-page "https://memcached.org/")
|
||
(synopsis "In-memory caching service")
|
||
(description "Memcached is an in-memory key-value store. It has a small
|
||
and generic API, and was originally intended for use with dynamic web
|
||
applications.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public mongodb
|
||
(package
|
||
(name "mongodb")
|
||
(version "3.4.10")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/mongodb/mongo/archive/r"
|
||
version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32 "0676lvkljj7a5hdhv78dbykqnqrj9lbn9799mi84b8vbnzsq961r"))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
'(begin
|
||
(for-each (lambda (dir)
|
||
(delete-file-recursively
|
||
(string-append "src/third_party/" dir)))
|
||
'("pcre-8.41" "scons-2.5.0" "snappy-1.1.3"
|
||
"valgrind-3.11.0" "wiredtiger"
|
||
"yaml-cpp-0.5.3" "zlib-1.2.8"))
|
||
#t))
|
||
(patches
|
||
(list
|
||
(search-patch "mongodb-support-unknown-linux-distributions.patch")))))
|
||
(build-system scons-build-system)
|
||
(inputs
|
||
`(("openssl" ,openssl)
|
||
("pcre" ,pcre)
|
||
,@(match (%current-system)
|
||
((or "x86_64-linux" "aarch64-linux" "mips64el-linux")
|
||
`(("wiredtiger" ,wiredtiger)))
|
||
(_ `()))
|
||
("yaml-cpp" ,yaml-cpp)
|
||
("zlib" ,zlib)
|
||
("snappy" ,snappy)))
|
||
(native-inputs
|
||
`(("valgrind" ,valgrind)
|
||
("perl" ,perl)
|
||
("python" ,python2-minimal)
|
||
("python2-pymongo" ,python2-pymongo)
|
||
("python2-pyyaml" ,python2-pyyaml)
|
||
("tzdata" ,tzdata)))
|
||
(arguments
|
||
`(#:scons ,scons-python2
|
||
#:phases
|
||
(let ((common-options
|
||
`(;; "--use-system-tcmalloc" TODO: Missing gperftools
|
||
"--use-system-pcre"
|
||
;; wiredtiger is 64-bit only
|
||
,,(if (any (cute string-prefix? <> (or (%current-target-system)
|
||
(%current-system)))
|
||
'("i686-linux" "armhf-linux"))
|
||
``"--wiredtiger=off"
|
||
``"--use-system-wiredtiger")
|
||
;; TODO
|
||
;; build/opt/mongo/db/fts/unicode/string.o failed: Error 1
|
||
;; --use-system-boost
|
||
"--use-system-snappy"
|
||
"--use-system-zlib"
|
||
"--use-system-valgrind"
|
||
;; "--use-system-stemmer" TODO: Missing relevant package
|
||
"--use-system-yaml"
|
||
"--disable-warnings-as-errors"
|
||
,(format #f "--jobs=~a" (parallel-job-count))
|
||
"--ssl")))
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'scons-propagate-environment
|
||
(lambda _
|
||
;; Modify the SConstruct file to arrange for
|
||
;; environment variables to be propagated.
|
||
(substitute* "SConstruct"
|
||
(("^env = Environment\\(")
|
||
"env = Environment(ENV=os.environ, "))
|
||
#t))
|
||
(add-after 'unpack 'create-version-file
|
||
(lambda _
|
||
(call-with-output-file "version.json"
|
||
(lambda (port)
|
||
(display ,(simple-format #f "{
|
||
\"version\": \"~A\"
|
||
}" version) port)))
|
||
#t))
|
||
(replace 'build
|
||
(lambda _
|
||
(zero? (apply system*
|
||
`("scons"
|
||
,@common-options
|
||
"mongod" "mongo" "mongos")))))
|
||
(replace 'check
|
||
(lambda* (#:key tests? inputs #:allow-other-keys)
|
||
(setenv "TZDIR"
|
||
(string-append (assoc-ref inputs "tzdata")
|
||
"/share/zoneinfo"))
|
||
(or (not tests?)
|
||
;; Note that with the tests, especially the unittests, the
|
||
;; build can take up to ~45GB of space, as many tests are
|
||
;; individual executable files, with some being hundreds of
|
||
;; megabytes in size.
|
||
(begin
|
||
(apply
|
||
invoke `("scons" ,@common-options "dbtest" "unittests"))
|
||
(substitute* "build/unittests.txt"
|
||
;; TODO: Don't run the async_stream_test, as it hangs
|
||
(("^build\\/opt\\/mongo\\/executor\\/async\\_stream\\_test\n$")
|
||
"")
|
||
;; TODO: This test fails
|
||
;; Expected 0UL != disks.size() (0 != 0) @src/mongo/util/procparser_test.cpp:476
|
||
(("^build\\/opt\\/mongo\\/util\\/procparser\\_test\n$")
|
||
""))
|
||
(invoke "python" "buildscripts/resmoke.py"
|
||
"--suites=dbtest,unittests"
|
||
(format #f "--jobs=~a" (parallel-job-count)))))))
|
||
(replace 'install
|
||
(lambda _
|
||
(let ((bin (string-append (assoc-ref %outputs "out") "/bin")))
|
||
(install-file "mongod" bin)
|
||
(install-file "mongos" bin)
|
||
(install-file "mongo" bin))
|
||
#t))))))
|
||
(home-page "https://www.mongodb.org/")
|
||
(synopsis "High performance and high availability document database")
|
||
(description
|
||
"Mongo is a high-performance, high availability, schema-free
|
||
document-oriented database. A key goal of MongoDB is to bridge the gap
|
||
between key/value stores (which are fast and highly scalable) and traditional
|
||
RDBMS systems (which are deep in functionality).")
|
||
(license (list license:agpl3
|
||
;; Some parts are licensed under the Apache License
|
||
license:asl2.0))))
|
||
|
||
;; XXX When updating, check whether boost-for-mysql is still needed.
|
||
;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
|
||
(define-public mysql
|
||
(package
|
||
(name "mysql")
|
||
(version "5.7.23")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (list (string-append
|
||
"https://dev.mysql.com/get/Downloads/MySQL-"
|
||
(version-major+minor version) "/"
|
||
name "-" version ".tar.gz")
|
||
(string-append
|
||
"https://downloads.mysql.com/archives/get/file/"
|
||
name "-" version ".tar.gz")))
|
||
(sha256
|
||
(base32
|
||
"0rbc3xsc11lq2dm0ip6gxa16c06hi74scb97x5cw7yhbabaz4c07"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
`(#:configure-flags
|
||
'("-DBUILD_CONFIG=mysql_release"
|
||
"-DWITH_SSL=system"
|
||
"-DWITH_ZLIB=system"
|
||
"-DDEFAULT_CHARSET=utf8"
|
||
"-DDEFAULT_COLLATION=utf8_general_ci"
|
||
"-DMYSQL_DATADIR=/var/lib/mysql"
|
||
"-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
|
||
"-DINSTALL_INFODIR=share/mysql/docs"
|
||
"-DINSTALL_MANDIR=share/man"
|
||
"-DINSTALL_PLUGINDIR=lib/mysql/plugin"
|
||
"-DINSTALL_SCRIPTDIR=bin"
|
||
"-DINSTALL_INCLUDEDIR=include/mysql"
|
||
"-DINSTALL_DOCREADMEDIR=share/mysql/docs"
|
||
"-DINSTALL_SUPPORTFILESDIR=share/mysql"
|
||
"-DINSTALL_MYSQLSHAREDIR=share/mysql"
|
||
"-DINSTALL_DOCDIR=share/mysql/docs"
|
||
"-DINSTALL_SHAREDIR=share/mysql"
|
||
;; Get rid of test data.
|
||
"-DINSTALL_MYSQLTESTDIR="
|
||
"-DINSTALL_SQLBENCHDIR=")
|
||
#:phases (modify-phases %standard-phases
|
||
(add-after
|
||
'install 'remove-extra-binaries
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let ((out (assoc-ref outputs "out")))
|
||
;; Remove the 3 *_embedded files, which weigh in at
|
||
;; 14 MiB each.
|
||
(for-each delete-file
|
||
(find-files (string-append out "/bin")
|
||
"_embedded$"))
|
||
#t))))))
|
||
(native-inputs
|
||
`(("bison" ,bison)
|
||
("perl" ,perl)))
|
||
(inputs
|
||
`(("boost" ,boost-for-mysql)
|
||
("libaio" ,libaio)
|
||
("ncurses" ,ncurses)
|
||
("openssl" ,openssl)
|
||
("zlib" ,zlib)))
|
||
(home-page "https://www.mysql.com/")
|
||
(synopsis "Fast, easy to use, and popular database")
|
||
(description
|
||
"MySQL is a fast, reliable, and easy to use relational database
|
||
management system that supports the standardized Structured Query
|
||
Language.")
|
||
(license license:gpl2)))
|
||
|
||
(define-public mariadb
|
||
(package
|
||
(name "mariadb")
|
||
(version "10.1.36")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://downloads.mariadb.org/f/"
|
||
name "-" version "/source/"
|
||
name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0n5aj76mn9rxc21l2kjmfrg10bmsyy4cic68khjr94iby262wx5d"))
|
||
(patches (search-patches "mariadb-client-test-32bit.patch"))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
'(begin
|
||
;; Delete bundled snappy and xz.
|
||
(delete-file-recursively "storage/tokudb/PerconaFT/third_party")
|
||
(substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
|
||
;; This file checks that the bundled sources are present and
|
||
;; declares build procedures for them.
|
||
(("^include\\(TokuThirdParty\\)") ""))
|
||
(substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
|
||
;; Don't attempt to use the procedures we just removed.
|
||
((" build_lzma build_snappy") ""))
|
||
|
||
;; Preserve CMakeLists.txt for these.
|
||
(for-each (lambda (file)
|
||
(unless (string-suffix? "CMakeLists.txt" file)
|
||
(delete-file file)))
|
||
(append (find-files "extra/yassl")
|
||
(find-files "pcre") (find-files "zlib")))
|
||
#t))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
`(#:configure-flags
|
||
'("-DBUILD_CONFIG=mysql_release"
|
||
;; Linking with libarchive fails, like this:
|
||
|
||
;; ld: /gnu/store/...-libarchive-3.2.2/lib/libarchive.a(archive_entry.o):
|
||
;; relocation R_X86_64_32 against `.bss' can not be used when
|
||
;; making a shared object; recompile with -fPIC
|
||
|
||
;; For now, disable the features that that use libarchive (xtrabackup).
|
||
"-DWITH_LIBARCHIVE=OFF"
|
||
|
||
;; Ensure the system libraries are used.
|
||
"-DWITH_JEMALLOC=yes"
|
||
"-DWITH_PCRE=system"
|
||
"-DWITH_SSL=system"
|
||
"-DWITH_ZLIB=system"
|
||
|
||
"-DDEFAULT_CHARSET=utf8"
|
||
"-DDEFAULT_COLLATION=utf8_general_ci"
|
||
"-DMYSQL_DATADIR=/var/lib/mysql"
|
||
"-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
|
||
"-DINSTALL_INFODIR=share/mysql/docs"
|
||
"-DINSTALL_MANDIR=share/man"
|
||
"-DINSTALL_PLUGINDIR=lib/mysql/plugin"
|
||
"-DINSTALL_SCRIPTDIR=bin"
|
||
"-DINSTALL_INCLUDEDIR=include/mysql"
|
||
"-DINSTALL_DOCREADMEDIR=share/mysql/docs"
|
||
"-DINSTALL_SUPPORTFILESDIR=share/mysql/support-files"
|
||
"-DINSTALL_MYSQLSHAREDIR=share/mysql"
|
||
"-DINSTALL_DOCDIR=share/mysql/docs"
|
||
"-DINSTALL_SHAREDIR=share")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'fix-pcre-detection
|
||
(lambda _
|
||
;; The bundled PCRE in MariaDB has a patch that was upstreamed
|
||
;; in version 8.34. Unfortunately the upstream patch behaves
|
||
;; slightly differently and the build system fails to detect it.
|
||
;; See <https://bugs.exim.org/show_bug.cgi?id=2173>.
|
||
;; XXX: Consider patching PCRE instead.
|
||
(substitute* "cmake/pcre.cmake"
|
||
((" OR NOT PCRE_STACK_SIZE_OK") ""))
|
||
#t))
|
||
(add-after 'unpack 'adjust-tests
|
||
(lambda _
|
||
(let ((disabled-tests
|
||
'(;; These fail because root@hostname == root@localhost in
|
||
;; the build environment, causing a user count mismatch.
|
||
;; See <https://jira.mariadb.org/browse/MDEV-7761>.
|
||
"main.join_cache"
|
||
"main.explain_non_select"
|
||
"main.stat_tables_innodb"
|
||
"roles.acl_statistics"
|
||
|
||
;; FIXME: This test fails on i686:
|
||
;; -myisampack: Can't create/write to file (Errcode: 17 "File exists")
|
||
;; +myisampack: Can't create/write to file (Errcode: 17 "File exists)
|
||
;; When running "myisampack --join=foo/t3 foo/t1 foo/t2"
|
||
;; (all three tables must exist and be identical)
|
||
;; in a loop it produces the same error around 1/240 times.
|
||
;; montywi on #maria suggested removing the real_end check in
|
||
;; "strings/my_vsnprintf.c" on line 503, yet it still does not
|
||
;; reach the ending quote occasionally. Disable it for now.
|
||
"main.myisampack"
|
||
;; FIXME: This test fails on armhf-linux:
|
||
"mroonga/storage.index_read_multiple_double"))
|
||
|
||
;; This file contains a list of known-flaky tests for this
|
||
;; release. Append our own items.
|
||
(unstable-tests (open-file "mysql-test/unstable-tests" "a")))
|
||
(for-each (lambda (test)
|
||
(format unstable-tests "~a : ~a\n"
|
||
test "Disabled in Guix"))
|
||
disabled-tests)
|
||
(close-port unstable-tests)
|
||
|
||
(substitute* "mysql-test/mysql-test-run.pl"
|
||
(("/bin/ls") (which "ls"))
|
||
(("/bin/sh") (which "sh")))
|
||
#t)))
|
||
(add-before 'configure 'disable-plugins
|
||
(lambda _
|
||
(let ((disable-plugin (lambda (name)
|
||
(call-with-output-file
|
||
(string-append "plugin/" name
|
||
"/CMakeLists.txt")
|
||
(lambda (port)
|
||
(format port "\n")))))
|
||
(disabled-plugins '(;; XXX: Causes a test failure.
|
||
"disks")))
|
||
(for-each disable-plugin disabled-plugins)
|
||
#t)))
|
||
(replace 'check
|
||
(lambda* (#:key (tests? #t) #:allow-other-keys)
|
||
(if tests?
|
||
(with-directory-excursion "mysql-test"
|
||
(invoke "./mtr" "--verbose"
|
||
"--retry=3"
|
||
"--testcase-timeout=40"
|
||
"--suite-timeout=600"
|
||
"--parallel" (number->string (parallel-job-count))
|
||
"--skip-test-list=unstable-tests"))
|
||
(format #t "test suite not run~%"))
|
||
#t))
|
||
(add-after
|
||
'install 'post-install
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let* ((out (assoc-ref outputs "out"))
|
||
(test (assoc-ref outputs "test")))
|
||
(substitute* (string-append out "/bin/mysql_install_db")
|
||
(("basedir=\"\"")
|
||
(string-append "basedir=\"" out "\"")))
|
||
;; Remove unneeded files for testing.
|
||
(with-directory-excursion out
|
||
(for-each delete-file-recursively
|
||
'("data" "mysql-test" "sql-bench"
|
||
"share/man/man1/mysql-test-run.pl.1"))
|
||
;; Delete huge and unnecessary executables.
|
||
(for-each delete-file (find-files "bin" "(test|embedded)"))
|
||
;; And static libraries.
|
||
(for-each delete-file (find-files "lib" "\\.a$")))
|
||
#t))))))
|
||
(native-inputs
|
||
`(("bison" ,bison)
|
||
("perl" ,perl)))
|
||
(inputs
|
||
`(("jemalloc" ,jemalloc)
|
||
("libaio" ,libaio)
|
||
("libxml2" ,libxml2)
|
||
("ncurses" ,ncurses)
|
||
("pcre" ,pcre)
|
||
("snappy" ,snappy)
|
||
("xz" ,xz)
|
||
("zlib" ,zlib)))
|
||
(propagated-inputs
|
||
;; mariadb.pc says -lssl -lcrypto, so propagate it.
|
||
`(("openssl" ,openssl)))
|
||
;; The test suite is very resource intensive and can take more than three
|
||
;; hours on a x86_64 system. Give slow and busy machines some leeway.
|
||
(properties '((timeout . 64800))) ;18 hours
|
||
(home-page "https://mariadb.org/")
|
||
(synopsis "SQL database server")
|
||
(description
|
||
"MariaDB is a multi-user and multi-threaded SQL database server, designed
|
||
as a drop-in replacement of MySQL.")
|
||
(license license:gpl2)))
|
||
|
||
;; Don't forget to update the other postgresql packages when upgrading this one.
|
||
(define-public postgresql
|
||
(package
|
||
(name "postgresql")
|
||
(version "10.5")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://ftp.postgresql.org/pub/source/v"
|
||
version "/postgresql-" version ".tar.bz2"))
|
||
(sha256
|
||
(base32
|
||
"04a07jkvc5s6zgh6jr78149kcjmsxclizsqabjw44ld4j5n633kc"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:configure-flags '("--with-uuid=e2fs")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'configure 'patch-/bin/sh
|
||
(lambda _
|
||
;; Refer to the actual shell.
|
||
(substitute* '("src/bin/pg_ctl/pg_ctl.c"
|
||
"src/bin/psql/command.c")
|
||
(("/bin/sh") (which "sh")))
|
||
#t))
|
||
(add-after 'build 'build-contrib
|
||
(lambda _
|
||
(invoke "make" "-C" "contrib")))
|
||
(add-after 'install 'install-contrib
|
||
(lambda _
|
||
(invoke "make" "-C" "contrib" "install"))))))
|
||
(inputs
|
||
`(("readline" ,readline)
|
||
("libuuid" ,util-linux)
|
||
("zlib" ,zlib)))
|
||
(home-page "https://www.postgresql.org/")
|
||
(synopsis "Powerful object-relational database system")
|
||
(description
|
||
"PostgreSQL is a powerful object-relational database system. It is fully
|
||
ACID compliant, has full support for foreign keys, joins, views, triggers, and
|
||
stored procedures (in multiple languages). It includes most SQL:2008 data
|
||
types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and
|
||
TIMESTAMP. It also supports storage of binary large objects, including
|
||
pictures, sounds, or video.")
|
||
(license (license:x11-style "file://COPYRIGHT"))))
|
||
|
||
(define-public postgresql-9.6
|
||
(package
|
||
(inherit postgresql)
|
||
(name "postgresql")
|
||
(version "9.6.9")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://ftp.postgresql.org/pub/source/v"
|
||
version "/postgresql-" version ".tar.bz2"))
|
||
(sha256
|
||
(base32
|
||
"0biy8j69dbvdmrag55pdszpc0702agzqhhcwdx21xp02mzim4ydr"))))))
|
||
|
||
(define-public python-pymysql
|
||
(package
|
||
(name "python-pymysql")
|
||
(version "0.9.2")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "PyMySQL" version))
|
||
(sha256
|
||
(base32
|
||
"0gvi63f1zq1bbd30x28kqyx351hal1yc323ckp0mihainb5n1iwy"))))
|
||
(build-system python-build-system)
|
||
(native-inputs
|
||
`(("python-unittest2" ,python-unittest2)))
|
||
(inputs
|
||
`(("python-cryptography" ,python-cryptography)))
|
||
(arguments
|
||
`(#:tests? #f)) ; tests expect a running MySQL
|
||
(home-page "https://github.com/PyMySQL/PyMySQL/")
|
||
(synopsis "Pure-Python MySQL driver")
|
||
(description
|
||
"PyMySQL is a pure-Python MySQL client library, based on PEP 249.
|
||
Most public APIs are compatible with @command{mysqlclient} and MySQLdb.")
|
||
(license license:expat)))
|
||
|
||
(define-public python2-pymysql
|
||
(package-with-python2 python-pymysql))
|
||
|
||
(define-public qdbm
|
||
(package
|
||
(name "qdbm")
|
||
(version "1.8.78")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://fallabs.com/" name "/"
|
||
name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0gmpvhn02pkq280ffmn4da1g4mdr1xxz7l80b7y4n7km1mrzwrml"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`( #:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath="
|
||
(assoc-ref %outputs "out")
|
||
"/lib"))))
|
||
(home-page "http://fallabs.com/qdbm")
|
||
(synopsis "Key-value database")
|
||
(description "QDBM is a library of routines for managing a
|
||
database. The database is a simple data file containing key-value
|
||
pairs. Every key and value is serial bytes with variable length.
|
||
Binary data as well as character strings can be used as a key or a
|
||
value. There is no concept of data tables or data types. Records are
|
||
organized in a hash table or B+ tree.")
|
||
(license license:lgpl2.1+)))
|
||
|
||
(define-public recutils
|
||
(package
|
||
(name "recutils")
|
||
(version "1.7")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://gnu/recutils/recutils-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0cdwa4094x3yx7vn98xykvnlp9rngvd58d19vs3vh5hrvggccg93"))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
'(begin
|
||
;; Adjust the bundled gnulib to work with glibc 2.28. See e.g.
|
||
;; "m4-gnulib-libio.patch". This is a phase rather than patch
|
||
;; or snippet to work around <https://bugs.gnu.org/32347>.
|
||
(substitute* (find-files "lib" "\\.c$")
|
||
(("#if defined _IO_ftrylockfile")
|
||
"#if defined _IO_EOF_SEEN"))
|
||
(substitute* "lib/stdio-impl.h"
|
||
(("^/\\* BSD stdio derived implementations")
|
||
(string-append "#if !defined _IO_IN_BACKUP && defined _IO_EOF_SEEN\n"
|
||
"# define _IO_IN_BACKUP 0x100\n"
|
||
"#endif\n\n"
|
||
"/* BSD stdio derived implementations")))
|
||
#t))))
|
||
(build-system gnu-build-system)
|
||
|
||
;; Running tests in parallel leads to test failures and crashes in
|
||
;; torture/utils.
|
||
(arguments '(#:parallel-tests? #f
|
||
#:configure-flags
|
||
(list (string-append "--with-bash-headers="
|
||
(assoc-ref %build-inputs "bash:include")
|
||
"/include/bash"))
|
||
|
||
#:phases (modify-phases %standard-phases
|
||
(add-before 'build 'set-bash4.4-header-location
|
||
(lambda _
|
||
(substitute* "bash/Makefile.in"
|
||
;; Adjust the header search path for Bash
|
||
;; 4.4 in accordance with 'bash.pc'.
|
||
(("AM_CPPFLAGS = (.*)$" _ rest)
|
||
(string-append "AM_CPPFLAGS = "
|
||
"-I$(BASH_HEADERS)/include "
|
||
rest))
|
||
|
||
;; Install to PREFIX/lib/bash to match Bash
|
||
;; 4.4's search path.
|
||
(("^libdir = .*$")
|
||
"libdir = @libdir@/bash\n"))
|
||
#t)))))
|
||
|
||
(native-inputs `(("emacs" ,emacs-minimal)
|
||
("bc" ,bc)
|
||
("bash:include" ,bash "include")
|
||
("libuuid" ,util-linux)))
|
||
|
||
;; TODO: Add more optional inputs.
|
||
(inputs `(("curl" ,curl)
|
||
("libgcrypt" ,libgcrypt)
|
||
("check" ,check)))
|
||
(synopsis "Manipulate plain text files as databases")
|
||
(description
|
||
"GNU Recutils is a set of tools and libraries for creating and
|
||
manipulating text-based, human-editable databases. Despite being text-based,
|
||
databases created with Recutils carry all of the expected features such as
|
||
unique fields, primary keys, time stamps and more. Many different field
|
||
types are supported, as is encryption.")
|
||
(license license:gpl3+)
|
||
(home-page "https://www.gnu.org/software/recutils/")))
|
||
|
||
(define-public rocksdb
|
||
(package
|
||
(name "rocksdb")
|
||
(version "5.12.4")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/facebook/rocksdb"
|
||
"/archive/v" version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1jcwgsjhk4hdfr2wf549blkgb89vwcdb5i2ahhqs6zf3mm20i3bf"))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
'(begin
|
||
;; TODO: unbundle gtest.
|
||
(delete-file "build_tools/gnu_parallel")
|
||
(substitute* "Makefile"
|
||
(("build_tools/gnu_parallel") "parallel"))
|
||
#t))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:make-flags (list "CC=gcc" "V=1"
|
||
;; Ceph requires that RTTI is enabled.
|
||
"USE_RTTI=1"
|
||
(string-append "INSTALL_PATH="
|
||
(assoc-ref %outputs "out"))
|
||
|
||
;; Running the full test suite takes hours and require
|
||
;; a lot of disk space. Instead we only run a subset
|
||
;; (see .travis.yml and Makefile).
|
||
"ROCKSDBTESTS_END=db_tailing_iter_test")
|
||
#:test-target "check_some"
|
||
;; Many tests fail on 32-bit platforms. There are multiple reports about
|
||
;; this upstream, but it's not going to be supported any time soon.
|
||
#:tests? (let ((system ,(or (%current-target-system)
|
||
(%current-system))))
|
||
(or (string-prefix? "x86_64-linux" system)
|
||
(string-prefix? "aarch64-linux" system)))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'patch-Makefile
|
||
(lambda _
|
||
(substitute* "Makefile"
|
||
;; Don't depend on the static library when installing.
|
||
(("install: install-static")
|
||
"install: install-shared")
|
||
(("#!/bin/sh") (string-append "#!" (which "sh"))))
|
||
#t))
|
||
(delete 'configure)
|
||
;; The default target is only needed for tests and built on demand.
|
||
(delete 'build)
|
||
(add-before 'check 'disable-optimizations
|
||
(lambda _
|
||
;; Prevent the build from passing '-march=native' to the compiler.
|
||
(setenv "PORTABLE" "1")
|
||
#t))
|
||
(add-before 'check 'disable-failing-tests
|
||
(lambda _
|
||
(substitute* "Makefile"
|
||
;; These tests reliably fail due to "Too many open files".
|
||
(("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\")
|
||
(("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\"))
|
||
#t))
|
||
(add-after 'check 'build
|
||
;; The default build target is a debug build for tests. The
|
||
;; install target depends on the "shared_lib" release target
|
||
;; so we build it here for clarity.
|
||
(lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys)
|
||
(apply invoke "make" "shared_lib"
|
||
`(,@(if parallel-build?
|
||
`("-j" ,(number->string (parallel-job-count)))
|
||
'())
|
||
,@make-flags)))))))
|
||
(native-inputs
|
||
`(("parallel" ,parallel)
|
||
("perl" ,perl)
|
||
("procps" ,procps)
|
||
("python" ,python-2)
|
||
("which" ,which)))
|
||
(inputs
|
||
`(("bzip2" ,bzip2)
|
||
("gflags" ,gflags)
|
||
("jemalloc" ,jemalloc)
|
||
("lz4" ,lz4)
|
||
("snappy" ,snappy)
|
||
("zlib" ,zlib)))
|
||
(home-page "http://rocksdb.org/")
|
||
(synopsis "Persistent key-value store for fast storage")
|
||
(description
|
||
"RocksDB is a library that forms the core building block for a fast
|
||
key-value server, especially suited for storing data on flash drives. It
|
||
has a @dfn{Log-Structured-Merge-Database} (LSM) design with flexible tradeoffs
|
||
between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor}
|
||
(RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded
|
||
compactions, making it specially suitable for storing multiple terabytes of
|
||
data in a single database. RocksDB is partially based on @code{LevelDB}.")
|
||
;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header
|
||
;; files carry the 3-clause BSD license.
|
||
(license (list license:gpl2 license:asl2.0 license:bsd-3))))
|
||
|
||
(define-public sparql-query
|
||
(package
|
||
(name "sparql-query")
|
||
(version "1.1")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/tialaramex/"
|
||
name "/archive/" version ".tar.gz"))
|
||
(sha256
|
||
(base32 "0yq3k20472rv8npcc420q9ab6idy584g5y0q501d360k5q0ggr8w"))
|
||
(file-name (string-append name "-" version ".tar.gz"))))
|
||
(build-system gnu-build-system)
|
||
(inputs
|
||
`(("readline" ,readline)
|
||
("ncurses" ,ncurses)
|
||
("glib" ,glib)
|
||
("libxml2" ,libxml2)
|
||
("curl" ,curl)))
|
||
(native-inputs
|
||
`(("pkg-config" ,pkg-config)))
|
||
(arguments
|
||
`(#:make-flags '("CC=gcc")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure)
|
||
;; The Makefile uses git to obtain versioning information. This phase
|
||
;; substitutes the git invocation with the package version.
|
||
(add-after 'unpack 'remove-git-dependency
|
||
(lambda _
|
||
(substitute* "Makefile"
|
||
(("^gitrev :=.*$")
|
||
(string-append "gitrev = \"v" ,version "\"")))))
|
||
;; The install phase of the Makefile assumes $PREFIX/usr/local/bin.
|
||
;; This replacement does the same thing, except for using $PREFIX/bin
|
||
;; instead.
|
||
(replace 'install
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let* ((out (assoc-ref outputs "out"))
|
||
(bin (string-append out "/bin")))
|
||
(install-file "sparql-query" bin)
|
||
(system* "ln" "--symbolic"
|
||
(string-append bin "/sparql-query")
|
||
(string-append bin "/sparql-update")))))
|
||
(replace 'check
|
||
(lambda* (#:key make-flags #:allow-other-keys)
|
||
(and
|
||
(zero? (apply system* "make" `(,@make-flags "scan-test")))
|
||
(zero? (system "./scan-test"))))))))
|
||
(home-page "https://github.com/tialaramex/sparql-query/")
|
||
(synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
|
||
(description "Sparql-query is a command-line tool for accessing SPARQL
|
||
endpoints over HTTP. It has been intentionally designed to 'feel' similar to
|
||
tools for interrogating SQL databases. For example, you can enter a query over
|
||
several lines, using a semi-colon at the end of a line to indicate the end of
|
||
your query. It also supports readline so that you can more easily recall and
|
||
edit previous queries, even across sessions. It can be used non-interactively,
|
||
for example from a shell script.")
|
||
;; Some files (like scan-sparql.c) contain a GPLv3+ license header, while
|
||
;; others (like sparql-query.c) contain a GPLv2+ license header.
|
||
(license (list license:gpl3+))))
|
||
|
||
(define-public sqlcrush
|
||
;; Unfortunately, there is no proper upstream release and may never be.
|
||
(let ((commit "b5f6868f189566a26eecc78d0f0659813c1aa98a")
|
||
(revision "1"))
|
||
(package
|
||
(name "sqlcrush")
|
||
(version (git-version "0.1.5" revision commit))
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/coffeeandscripts/sqlcrush.git")
|
||
(commit commit)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"0x3wy40r93p0jv3nbwj9a77wa4ff697d13r0wffmm7q9h3mzsww8"))))
|
||
(build-system python-build-system)
|
||
(inputs
|
||
`(("python-cryptography" ,python-cryptography)
|
||
("python-psycopg2" ,python-psycopg2)
|
||
("python-pymysql" ,python-pymysql)
|
||
("python-sqlalchemy" ,python-sqlalchemy)))
|
||
(home-page "https://github.com/coffeeandscripts/sqlcrush")
|
||
(synopsis "Text console-based database viewer and editor")
|
||
(description
|
||
"SQLcrush lets you view and edit a database directly from the text
|
||
console through an ncurses interface. You can explore each table's structure,
|
||
browse and edit the contents, add and delete entries, all while tracking your
|
||
changes.")
|
||
(license license:gpl3+)))) ; no headers, see README.md
|
||
|
||
(define-public sqlite
|
||
(package
|
||
(name "sqlite")
|
||
(version "3.24.0")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (let ((numeric-version
|
||
(match (string-split version #\.)
|
||
((first-digit other-digits ...)
|
||
(string-append first-digit
|
||
(string-pad-right
|
||
(string-concatenate
|
||
(map (cut string-pad <> 2 #\0)
|
||
other-digits))
|
||
6 #\0))))))
|
||
(string-append "https://sqlite.org/2018/sqlite-autoconf-"
|
||
numeric-version ".tar.gz")))
|
||
(sha256
|
||
(base32
|
||
"0jmprv2vpggzhy7ma4ynmv1jzn3pfiwzkld0kkg6hvgvqs44xlfr"))))
|
||
(build-system gnu-build-system)
|
||
(inputs `(("readline" ,readline)))
|
||
(arguments
|
||
`(#:configure-flags
|
||
;; Add -DSQLITE_SECURE_DELETE, -DSQLITE_ENABLE_UNLOCK_NOTIFY and
|
||
;; -DSQLITE_ENABLE_DBSTAT_VTAB to CFLAGS. GNU Icecat will refuse
|
||
;; to use the system SQLite unless these options are enabled.
|
||
(list (string-append "CFLAGS=-O2 -DSQLITE_SECURE_DELETE "
|
||
"-DSQLITE_ENABLE_UNLOCK_NOTIFY "
|
||
"-DSQLITE_ENABLE_DBSTAT_VTAB"))))
|
||
(home-page "https://www.sqlite.org/")
|
||
(synopsis "The SQLite database management system")
|
||
(description
|
||
"SQLite is a software library that implements a self-contained, serverless,
|
||
zero-configuration, transactional SQL database engine. SQLite is the most
|
||
widely deployed SQL database engine in the world. The source code for SQLite
|
||
is in the public domain.")
|
||
(license license:public-domain)))
|
||
|
||
;; This is used by Tracker.
|
||
(define-public sqlite-with-fts5
|
||
(package (inherit sqlite)
|
||
(name "sqlite-with-fts5")
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments sqlite)
|
||
((#:configure-flags flags)
|
||
`(cons "--enable-fts5" ,flags))))))
|
||
|
||
(define-public tdb
|
||
(package
|
||
(name "tdb")
|
||
(version "1.3.16")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://www.samba.org/ftp/tdb/tdb-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1ibcz466xwk1x6xvzlgzd5va4lyrjzm3rnjak29kkwk7cmhw4gva"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:phases
|
||
(modify-phases %standard-phases
|
||
(replace 'configure
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let ((out (assoc-ref outputs "out")))
|
||
;; The 'configure' script is a wrapper for Waf and
|
||
;; doesn't recognize things like '--enable-fast-install'.
|
||
(zero? (system* "./configure"
|
||
(string-append "--prefix=" out)))))))))
|
||
(native-inputs
|
||
`(;; TODO: Build the documentation.
|
||
;; ("docbook-xsl" ,docbook-xsl)
|
||
;; ("libxml2" ,libxml2)
|
||
;; ("libxslt" ,libxslt)
|
||
("python" ,python-2))) ;for the Waf build system
|
||
(home-page "https://tdb.samba.org/")
|
||
(synopsis "Trivial database")
|
||
(description
|
||
"TDB is a Trivial Database. In concept, it is very much like GDBM,
|
||
and BSD's DB except that it allows multiple simultaneous writers and uses
|
||
locking internally to keep writers from trampling on each other. TDB is also
|
||
extremely small.")
|
||
(license license:lgpl3+)))
|
||
|
||
(define-public perl-dbi
|
||
(package
|
||
(name "perl-dbi")
|
||
(version "1.641")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"mirror://cpan/authors/id/T/TI/TIMB/DBI-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1hf2x29bnqf2x1v4bdhji802z7n2mbg7h1amv8gdkqyhrlrfa2am"))))
|
||
(build-system perl-build-system)
|
||
(synopsis "Database independent interface for Perl")
|
||
(description "This package provides an database interface for Perl.")
|
||
(home-page "https://metacpan.org/release/DBI")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-dbix-class
|
||
(package
|
||
(name "perl-dbix-class")
|
||
(version "0.082841")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/R/RI/RIBASUSHI/"
|
||
"DBIx-Class-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1gf3hgv8f9rnr8bl4ljgsqk4aliphmvljhsk4282kvdc4mcgh1fp"))))
|
||
(build-system perl-build-system)
|
||
(native-inputs
|
||
`(("perl-dbd-sqlite" ,perl-dbd-sqlite)
|
||
("perl-file-temp" ,perl-file-temp)
|
||
("perl-module-install" ,perl-module-install)
|
||
("perl-package-stash" ,perl-package-stash)
|
||
("perl-test-deep" ,perl-test-deep)
|
||
("perl-test-exception" ,perl-test-exception)
|
||
("perl-test-warn" ,perl-test-warn)))
|
||
(propagated-inputs
|
||
`(("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
|
||
("perl-class-c3-componentised" ,perl-class-c3-componentised)
|
||
("perl-class-inspector" ,perl-class-inspector)
|
||
("perl-config-any" ,perl-config-any)
|
||
("perl-context-preserve" ,perl-context-preserve)
|
||
("perl-data-dumper-concise" ,perl-data-dumper-concise)
|
||
("perl-data-page" ,perl-data-page)
|
||
("perl-dbi" ,perl-dbi)
|
||
("perl-devel-globaldestruction" ,perl-devel-globaldestruction)
|
||
("perl-hash-merge" ,perl-hash-merge)
|
||
("perl-module-find" ,perl-module-find)
|
||
("perl-moo" ,perl-moo)
|
||
("perl-mro-compat" ,perl-mro-compat)
|
||
("perl-namespace-clean" ,perl-namespace-clean)
|
||
("perl-path-class" ,perl-path-class)
|
||
("perl-scalar-list-utils" ,perl-scalar-list-utils)
|
||
("perl-scope-guard" ,perl-scope-guard)
|
||
("perl-sql-abstract" ,perl-sql-abstract)
|
||
("perl-sub-name" ,perl-sub-name)
|
||
("perl-text-balanced" ,perl-text-balanced)
|
||
("perl-try-tiny" ,perl-try-tiny)))
|
||
(home-page "https://metacpan.org/release/DBIx-Class")
|
||
(synopsis "Extensible and flexible object <-> relational mapper")
|
||
(description "An SQL to OO mapper with an object API inspired by
|
||
Class::DBI (with a compatibility layer as a springboard for porting) and a
|
||
resultset API that allows abstract encapsulation of database operations. It
|
||
aims to make representing queries in your code as perl-ish as possible while
|
||
still providing access to as many of the capabilities of the database as
|
||
possible, including retrieving related records from multiple tables in a
|
||
single query, \"JOIN\", \"LEFT JOIN\", \"COUNT\", \"DISTINCT\", \"GROUP BY\",
|
||
\"ORDER BY\" and \"HAVING\" support.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-dbix-class-cursor-cached
|
||
(package
|
||
(name "perl-dbix-class-cursor-cached")
|
||
(version "1.001004")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/A/AR/ARCANEZ/"
|
||
"DBIx-Class-Cursor-Cached-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"09b2jahn2x12qm4f7qm1jzsxbz7qn1czp6a3fnl5l2i3l4r5421p"))))
|
||
(build-system perl-build-system)
|
||
(native-inputs
|
||
`(("perl-cache-cache" ,perl-cache-cache)
|
||
("perl-dbd-sqlite" ,perl-dbd-sqlite)
|
||
("perl-module-install" ,perl-module-install)))
|
||
(propagated-inputs
|
||
`(("perl-carp-clan" ,perl-carp-clan)
|
||
("perl-dbix-class" ,perl-dbix-class)))
|
||
(home-page "https://metacpan.org/release/DBIx-Class-Cursor-Cached")
|
||
(synopsis "Cursor with built-in caching support")
|
||
(description "DBIx::Class::Cursor::Cached provides a cursor class with
|
||
built-in caching support.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-dbix-class-introspectablem2m
|
||
(package
|
||
(name "perl-dbix-class-introspectablem2m")
|
||
(version "0.001002")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
|
||
"DBIx-Class-IntrospectableM2M-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1w47rh2241iy5x3a9bqsyd5kdp9sk43dksr99frzv4qn4jsazfn6"))))
|
||
(build-system perl-build-system)
|
||
(native-inputs
|
||
`(("perl-module-install" ,perl-module-install)))
|
||
(propagated-inputs
|
||
`(("perl-dbix-class" ,perl-dbix-class)))
|
||
(home-page "https://metacpan.org/release/DBIx-Class-IntrospectableM2M")
|
||
(synopsis "Introspect many-to-many relationships")
|
||
(description "Because the many-to-many relationships are not real
|
||
relationships, they can not be introspected with DBIx::Class. Many-to-many
|
||
relationships are actually just a collection of convenience methods installed
|
||
to bridge two relationships. This DBIx::Class component can be used to store
|
||
all relevant information about these non-relationships so they can later be
|
||
introspected and examined.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-dbix-class-schema-loader
|
||
(package
|
||
(name "perl-dbix-class-schema-loader")
|
||
(version "0.07049")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
|
||
"DBIx-Class-Schema-Loader-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0r57fv71ypxafb85cpxph1hdqii7ipjwvc19yb6fpkvq2ggcssg8"))))
|
||
(build-system perl-build-system)
|
||
(native-inputs
|
||
`(("perl-config-any" ,perl-config-any)
|
||
("perl-config-general" ,perl-config-general)
|
||
("perl-dbd-sqlite" ,perl-dbd-sqlite)
|
||
("perl-dbix-class-introspectablem2m" ,perl-dbix-class-introspectablem2m)
|
||
("perl-module-install" ,perl-module-install)
|
||
("perl-moose" ,perl-moose)
|
||
("perl-moosex-markasmethods" ,perl-moosex-markasmethods)
|
||
("perl-moosex-nonmoose" ,perl-moosex-nonmoose)
|
||
("perl-namespace-autoclean" ,perl-namespace-autoclean)
|
||
("perl-test-deep" ,perl-test-deep)
|
||
("perl-test-differences" ,perl-test-differences)
|
||
("perl-test-exception" ,perl-test-exception)
|
||
("perl-test-pod" ,perl-test-pod)
|
||
("perl-test-warn" ,perl-test-warn)))
|
||
(propagated-inputs
|
||
`(("perl-class-unload" ,perl-class-unload)
|
||
("perl-class-inspector" ,perl-class-inspector)
|
||
("perl-class-accessor-grouped" ,perl-class-accessor-grouped)
|
||
("perl-class-c3-componentised" ,perl-class-c3-componentised)
|
||
("perl-carp-clan" ,perl-carp-clan)
|
||
("perl-data-dump" ,perl-data-dump)
|
||
("perl-dbix-class" ,perl-dbix-class)
|
||
("perl-hash-merge" ,perl-hash-merge)
|
||
("perl-list-moreutils" ,perl-list-moreutils)
|
||
("perl-lingua-en-inflect-phrase" ,perl-lingua-en-inflect-phrase)
|
||
("perl-lingua-en-inflect-number" ,perl-lingua-en-inflect-number)
|
||
("perl-lingua-en-tagger" ,perl-lingua-en-tagger)
|
||
("perl-namespace-clean" ,perl-namespace-clean)
|
||
("perl-mro-compat" ,perl-mro-compat)
|
||
("perl-scope-guard" ,perl-scope-guard)
|
||
("perl-string-camelcase" ,perl-string-camelcase)
|
||
("perl-string-toidentifier-en" ,perl-string-toidentifier-en)
|
||
("perl-sub-name" ,perl-sub-name)
|
||
("perl-try-tiny" ,perl-try-tiny)))
|
||
(arguments `(#:tests? #f)) ;TODO: t/20invocations.t fails
|
||
(home-page "https://metacpan.org/release/DBIx-Class-Schema-Loader")
|
||
(synopsis "Create a DBIx::Class::Schema based on a database")
|
||
(description "DBIx::Class::Schema::Loader automates the definition of a
|
||
DBIx::Class::Schema by scanning database table definitions and setting up the
|
||
columns, primary keys, unique constraints and relationships.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-dbd-pg
|
||
(package
|
||
(name "perl-dbd-pg")
|
||
(version "3.7.4")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/T/TU/TURNSTEP/"
|
||
"DBD-Pg-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0gkqlvbmzbdm0g4k328nlkjdg3wrjm5i2n9jxj1i8sqxkm79rylz"))))
|
||
(build-system perl-build-system)
|
||
(native-inputs
|
||
`(("perl-dbi" ,perl-dbi)))
|
||
(propagated-inputs
|
||
`(("perl-dbi" ,perl-dbi)
|
||
("postgresql" ,postgresql)))
|
||
(home-page "https://metacpan.org/release/DBD-Pg")
|
||
(synopsis "DBI PostgreSQL interface")
|
||
(description "This package provides a PostgreSQL driver for the Perl5
|
||
@dfn{Database Interface} (DBI).")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-dbd-mysql
|
||
(package
|
||
(name "perl-dbd-mysql")
|
||
(version "4.048")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/M/MI/MICHIELB/"
|
||
"DBD-mysql-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1zqmch6c9gq06z90mkmk1skajk2kaggriw19ym5w04l7wv5gydqp"))))
|
||
(build-system perl-build-system)
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'configure 'skip-library-detection
|
||
;; Avoid depencies on perl-devel-checklib, openssl, and zlib. They
|
||
;; are really only needed for the test suite; their absence does not
|
||
;; affect the build or the end result.
|
||
(lambda _
|
||
(substitute* "Makefile.PL"
|
||
(("use Devel::CheckLib;" match)
|
||
(string-append "# " match))
|
||
(("assert_lib")
|
||
"print"))
|
||
#t)))
|
||
;; Tests require running MySQL server.
|
||
#:tests? #f))
|
||
(propagated-inputs
|
||
`(("perl-dbi" ,perl-dbi)
|
||
("mysql" ,mysql)))
|
||
(home-page "https://metacpan.org/release/DBD-mysql")
|
||
(synopsis "DBI MySQL interface")
|
||
(description "This package provides a MySQL driver for the Perl5
|
||
@dfn{Database Interface} (DBI).")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-dbd-sqlite
|
||
(package
|
||
(name "perl-dbd-sqlite")
|
||
(version "1.58")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"mirror://cpan/authors/id/I/IS/ISHIGAKI/DBD-SQLite-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0fqx386jgs9mmrknr7smmzapf07izgivza7x08lfm39ks2cxs83i"))))
|
||
(build-system perl-build-system)
|
||
(inputs `(("sqlite" ,sqlite)))
|
||
(propagated-inputs `(("perl-dbi" ,perl-dbi)))
|
||
(synopsis "SQlite interface for Perl")
|
||
(description "DBD::SQLite is a Perl DBI driver for SQLite, that includes
|
||
the entire thing in the distribution. So in order to get a fast transaction
|
||
capable RDBMS working for your Perl project you simply have to install this
|
||
module, and nothing else.")
|
||
(license license:perl-license)
|
||
(home-page "https://metacpan.org/release/DBD-SQLite")))
|
||
|
||
(define-public perl-sql-abstract
|
||
(package
|
||
(name "perl-sql-abstract")
|
||
(version "1.85")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/I/IL/ILMARI/"
|
||
"SQL-Abstract-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1aycggrvppy2zgkwwn85jkdz93n5gsx4dambrjk67k5067hayi4z"))))
|
||
(build-system perl-build-system)
|
||
(native-inputs
|
||
`(("perl-module-install" ,perl-module-install)
|
||
("perl-test-deep" ,perl-test-deep)
|
||
("perl-test-exception" ,perl-test-exception)
|
||
("perl-test-warn" ,perl-test-warn)))
|
||
(propagated-inputs
|
||
`(("perl-hash-merge" ,perl-hash-merge)
|
||
("perl-moo" ,perl-moo)
|
||
("perl-mro-compat" ,perl-mro-compat)
|
||
("perl-text-balanced" ,perl-text-balanced)))
|
||
(home-page "https://metacpan.org/release/SQL-Abstract")
|
||
(synopsis "Generate SQL from Perl data structures")
|
||
(description "This module was inspired by the excellent DBIx::Abstract.
|
||
While based on the concepts used by DBIx::Abstract, the concepts used have
|
||
been modified to make the SQL easier to generate from Perl data structures.
|
||
The underlying idea is for this module to do what you mean, based on the data
|
||
structures you provide it, so that you don't have to modify your code every
|
||
time your data changes.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-sql-splitstatement
|
||
(package
|
||
(name "perl-sql-splitstatement")
|
||
(version "1.00020")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/E/EM/EMAZEP/"
|
||
"SQL-SplitStatement-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0bqg45k4c9qkb2ypynlwhpvzsl4ssfagmsalys18s5c79ps30z7p"))))
|
||
(build-system perl-build-system)
|
||
(native-inputs
|
||
`(("perl-test-exception" ,perl-test-exception)))
|
||
(propagated-inputs
|
||
`(("perl-class-accessor" ,perl-class-accessor)
|
||
("perl-list-moreutils" ,perl-list-moreutils)
|
||
("perl-regexp-common" ,perl-regexp-common)
|
||
("perl-sql-tokenizer" ,perl-sql-tokenizer)))
|
||
(home-page "https://metacpan.org/release/SQL-SplitStatement")
|
||
(synopsis "Split SQL code into atomic statements")
|
||
(description "This module tries to split any SQL code, even including
|
||
non-standard extensions, into the atomic statements it is composed of.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public perl-sql-tokenizer
|
||
(package
|
||
(name "perl-sql-tokenizer")
|
||
(version "0.24")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "mirror://cpan/authors/id/I/IZ/IZUT/"
|
||
"SQL-Tokenizer-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1qa2dfbzdlr5qqdam9yn78z5w3al5r8577x06qan8wv58ay6ka7s"))))
|
||
(build-system perl-build-system)
|
||
(home-page "https://metacpan.org/release/SQL-Tokenizer")
|
||
(synopsis "SQL tokenizer")
|
||
(description "SQL::Tokenizer is a tokenizer for SQL queries. It does not
|
||
claim to be a parser or query verifier. It just creates sane tokens from a
|
||
valid SQL query.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public unixodbc
|
||
(package
|
||
(name "unixodbc")
|
||
(version "2.3.7")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri
|
||
(string-append
|
||
"ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32 "0xry3sg497wly8f7715a7gwkn2k36bcap0mvzjw74jj53yx6kwa5"))))
|
||
(build-system gnu-build-system)
|
||
(synopsis "Data source abstraction library")
|
||
(description "Unixodbc is a library providing an API with which to access
|
||
data sources. Data sources include SQL Servers and any software with an ODBC
|
||
Driver.")
|
||
(license license:lgpl2.1+)
|
||
;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
|
||
(home-page "http://www.unixodbc.org")))
|
||
|
||
(define-public unqlite
|
||
(package
|
||
(name "unqlite")
|
||
(version "1.1.6")
|
||
(source (origin
|
||
(method url-fetch)
|
||
;; Contains bug fixes against the official release, and has an
|
||
;; autotooled build system.
|
||
(uri (string-append "https://github.com/aidin36/tocc/releases/"
|
||
"download/v1.0.0/"
|
||
"unqlite-unofficial-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1sbpvhg15gadq0mpcy16q7k3rkg4b4dicpnn5xifpkpn02sqik3s"))))
|
||
(build-system gnu-build-system)
|
||
(arguments `(#:tests? #f)) ;No check target
|
||
(home-page "http://www.unqlite.org")
|
||
(synopsis "In-memory key/value and document store")
|
||
(description
|
||
"UnQLite is an in-process software library which implements a
|
||
self-contained, serverless, zero-configuration, transactional NoSQL
|
||
database engine. UnQLite is a document store database similar to
|
||
MongoDB, Redis, CouchDB, etc. as well as a standard Key/Value store
|
||
similar to BerkeleyDB, LevelDB, etc.")
|
||
(license license:bsd-2)))
|
||
|
||
(define-public redis
|
||
(package
|
||
(name "redis")
|
||
(version "4.0.10")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://download.redis.io/releases/redis-"
|
||
version".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"194cydhv3hf4v95ifvjvsqrs4jn3ffrkg5lvxj5d3y04lwsp9dhx"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:tests? #f ; tests related to master/slave and replication fail
|
||
#:phases (modify-phases %standard-phases
|
||
(delete 'configure))
|
||
#:make-flags `("CC=gcc"
|
||
"MALLOC=libc"
|
||
"LDFLAGS=-ldl"
|
||
,(string-append "PREFIX="
|
||
(assoc-ref %outputs "out")))))
|
||
(synopsis "Key-value cache and store")
|
||
(description "Redis is an advanced key-value cache and store. Redis
|
||
supports many data structures including strings, hashes, lists, sets, sorted
|
||
sets, bitmaps and hyperloglogs.")
|
||
(home-page "http://redis.io/")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public kyotocabinet
|
||
(package
|
||
(name "kyotocabinet")
|
||
(version "1.2.76")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://fallabs.com/kyotocabinet/pkg/"
|
||
name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0g6js20x7vnpq4p8ghbw3mh9wpqksya9vwhzdx6dnlf354zjsal1"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:configure-flags
|
||
(list
|
||
"--disable-opt" ;"-march=native". XXX this also turns off -O0.
|
||
(string-append "LDFLAGS=-Wl,-rpath="
|
||
(assoc-ref %outputs "out") "/lib"))))
|
||
(inputs `(("zlib" ,zlib)))
|
||
(home-page "http://fallabs.com/kyotocabinet/")
|
||
(synopsis
|
||
"Kyoto Cabinet is a modern implementation of the DBM database")
|
||
(description
|
||
"Kyoto Cabinet is a standalone file-based database that supports Hash
|
||
and B+ Tree data storage models. It is a fast key-value lightweight
|
||
database and supports many programming languages. It is a NoSQL database.")
|
||
(license license:gpl3+)))
|
||
|
||
(define-public tokyocabinet
|
||
(package
|
||
(name "tokyocabinet")
|
||
(version "1.4.48")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://fallabs.com/tokyocabinet/"
|
||
name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"140zvr0n8kvsl0fbn2qn3f2kh3yynfwnizn4dgbj47m975yg80x0"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:configure-flags
|
||
(list "--enable-pthread" "--enable-off64" "--enable-fastest"
|
||
(string-append "LDFLAGS=-Wl,-rpath="
|
||
(assoc-ref %outputs "out") "/lib"))))
|
||
(inputs
|
||
`(("zlib" ,zlib)))
|
||
(home-page "http://fallabs.com/tokyocabinet/")
|
||
(synopsis "Tokyo Cabinet is a modern implementation of the DBM database")
|
||
(description
|
||
"Tokyo Cabinet is a library of routines for managing a database.
|
||
The database is a simple data file containing records, each is a pair of a
|
||
key and a value. Every key and value is serial bytes with variable length.
|
||
Both binary data and character string can be used as a key and a value.
|
||
There is neither concept of data tables nor data types. Records are
|
||
organized in hash table, B+ tree, or fixed-length array.")
|
||
(license license:lgpl2.1+)))
|
||
|
||
(define-public wiredtiger
|
||
(package
|
||
(name "wiredtiger")
|
||
(version "2.9.1")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"http://source.wiredtiger.com/releases/wiredtiger-"
|
||
version ".tar.bz2"))
|
||
(sha256
|
||
(base32
|
||
"0krwnb2zfbhvjaskwl875qzd3y626s84zcciq2mxr5c5riw3yh6s"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:configure-flags '("--enable-lz4" "--with-builtins=snappy,zlib")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'check 'disable-test/fops
|
||
(lambda _
|
||
;; XXX: timed out after 3600 seconds of silence
|
||
(substitute* "Makefile"
|
||
(("test/fops") ""))
|
||
#t)))))
|
||
(inputs
|
||
`(("lz4" ,lz4)
|
||
("zlib" ,zlib)
|
||
("snappy" ,snappy)))
|
||
(home-page "http://source.wiredtiger.com/")
|
||
(synopsis "NoSQL data engine")
|
||
(description
|
||
"WiredTiger is an extensible platform for data management. It supports
|
||
row-oriented storage (where all columns of a row are stored together),
|
||
column-oriented storage (where columns are stored in groups, allowing for
|
||
more efficient access and storage of column subsets) and log-structured merge
|
||
trees (LSM), for sustained throughput under random insert workloads.")
|
||
(license license:gpl3) ; or GPL-2
|
||
;; configure.ac: WiredTiger requires a 64-bit build.
|
||
(supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))))
|
||
|
||
(define-public wiredtiger-3
|
||
(package
|
||
(inherit wiredtiger)
|
||
(name "wiredtiger")
|
||
(version "3.1.0")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "http://source.wiredtiger.com/releases/wiredtiger-"
|
||
version ".tar.bz2"))
|
||
(sha256
|
||
(base32
|
||
"014awypv579ascg4jbx4pndj2wld337m79yyzrzyr7hxrff139jx"))))))
|
||
|
||
(define-public guile-wiredtiger
|
||
(package
|
||
(name "guile-wiredtiger")
|
||
(version "0.7.0")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://framagit.org/a-guile-mind/guile-wiredtiger.git")
|
||
(commit "340ad4bc2ff4dcc6216a2f5c6f9172ca320ac66b")))
|
||
(file-name (string-append name "-" version "-checkout"))
|
||
(sha256
|
||
(base32
|
||
"15j36bvxxzil7qpwlmh1rffqpva3ynvrcpqhhqbj2c9208ayz595"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:parallel-tests? #f ;; tests can't be run in parallel, yet.
|
||
#:configure-flags
|
||
(list (string-append "--with-libwiredtiger-prefix="
|
||
(assoc-ref %build-inputs "wiredtiger")))
|
||
#:make-flags '("GUILE_AUTO_COMPILE=0")))
|
||
(native-inputs
|
||
`(("autoconf" ,autoconf)
|
||
("automake" ,automake)
|
||
("pkg-config" ,pkg-config)))
|
||
(inputs
|
||
`(("wiredtiger" ,wiredtiger-3)
|
||
("guile" ,guile-2.2)))
|
||
(propagated-inputs
|
||
`(("guile-bytestructures" ,guile-bytestructures)))
|
||
(synopsis "WiredTiger bindings for GNU Guile")
|
||
(description
|
||
"This package provides Guile bindings to the WiredTiger ``NoSQL''
|
||
database.")
|
||
(home-page "https://framagit.org/a-guile-mind/guile-wiredtiger")
|
||
(license license:gpl3+)))
|
||
|
||
(define-public perl-db-file
|
||
(package
|
||
(name "perl-db-file")
|
||
(version "1.842")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"mirror://cpan/authors/id/P/PM/PMQS/DB_File-"
|
||
version
|
||
".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0w2d99vs9qarng2f9fpg3gchfdzy6an13507jhclcl8wv183h5hg"))))
|
||
(build-system perl-build-system)
|
||
(inputs `(("bdb" ,bdb)))
|
||
(native-inputs `(("perl-test-pod" ,perl-test-pod)))
|
||
(arguments
|
||
`(#:phases (modify-phases %standard-phases
|
||
(add-before
|
||
'configure 'modify-config.in
|
||
(lambda* (#:key inputs #:allow-other-keys)
|
||
(substitute* "config.in"
|
||
(("/usr/local/BerkeleyDB") (assoc-ref inputs "bdb")))
|
||
#t)))))
|
||
(home-page "https://metacpan.org/release/DB_File")
|
||
(synopsis
|
||
"Perl5 access to Berkeley DB version 1.x")
|
||
(description
|
||
"The DB::File module provides Perl bindings to the Berkeley DB version 1.x.")
|
||
(license license:perl-license)))
|
||
|
||
(define-public lmdb
|
||
(package
|
||
(name "lmdb")
|
||
(version "0.9.22")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/LMDB/lmdb/archive/"
|
||
"LMDB_" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0a7a8535csrvw71mrgx680m5d17bnxmmhcccij30idifi1cpi4pk"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:test-target "test"
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(replace 'configure
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(chdir (string-append
|
||
(getenv "PWD") "/lmdb-LMDB_" ,version "/libraries/liblmdb"))
|
||
(substitute* "Makefile"
|
||
(("/usr/local") (assoc-ref outputs "out")))
|
||
#t)))))
|
||
(home-page "https://symas.com/products/lightning-memory-mapped-database")
|
||
(synopsis "Lightning Memory-Mapped Database library")
|
||
(description
|
||
"The @dfn{Lightning Memory-Mapped Database} (LMDB) is a high-performance
|
||
transactional database. Unlike more complex relational databases, LMDB handles
|
||
only key-value pairs (stored as arbitrary byte arrays) and relies on the
|
||
underlying operating system for caching and locking, keeping the code small and
|
||
simple.
|
||
The use of ‘zero-copy’ memory-mapped files combines the persistence of classic
|
||
disk-based databases with high read performance that scales linearly over
|
||
multiple cores. The size of each database is limited only by the size of the
|
||
virtual address space — not physical RAM.")
|
||
(license license:openldap2.8)))
|
||
|
||
(define-public libpqxx
|
||
(package
|
||
(name "libpqxx")
|
||
(version "4.0.1")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"http://pqxx.org/download/software/libpqxx/"
|
||
name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0f6wxspp6rx12fkasanb0z2g2gc8dhcfwnxagx8wwqbpg6ifsz09"))))
|
||
(build-system gnu-build-system)
|
||
(native-inputs
|
||
`(("python" ,python-2)))
|
||
(inputs `(("postgresql" ,postgresql)))
|
||
(arguments
|
||
`(#:tests? #f ; # FAIL: 1
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'configure 'fix-sed-command
|
||
(lambda _
|
||
;; Newer sed versions error out if double brackets are not used.
|
||
(substitute* "configure"
|
||
(("\\[:space:\\]") "[[:space:]]"))
|
||
#t)))))
|
||
(synopsis "C++ connector for PostgreSQL")
|
||
(description
|
||
"Libpqxx is a C++ library to enable user programs to communicate with the
|
||
PostgreSQL database back-end. The database back-end can be local or it may be
|
||
on another machine, accessed via TCP/IP.")
|
||
(home-page "http://pqxx.org/")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python-peewee
|
||
(package
|
||
(name "python-peewee")
|
||
(version "2.10.2")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "peewee" version))
|
||
(sha256
|
||
(base32
|
||
"10f2mrd5hw6rjklrzaix2lsxlgc8vx3xak54arcy6yd791zhchi3"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:tests? #f)) ; Fails to import test data
|
||
(native-inputs
|
||
`(("python-cython" ,python-cython)))
|
||
(home-page "https://github.com/coleifer/peewee/")
|
||
(synopsis "Small object-relational mapping utility")
|
||
(description
|
||
"Peewee is a simple and small ORM (object-relation mapping) tool. Peewee
|
||
handles converting between pythonic values and those used by databases, so you
|
||
can use Python types in your code without having to worry. It has built-in
|
||
support for sqlite, mysql and postgresql. If you already have a database, you
|
||
can autogenerate peewee models using @code{pwiz}, a model generator.")
|
||
(license license:expat)))
|
||
|
||
(define-public python2-peewee
|
||
(package-with-python2 python-peewee))
|
||
|
||
(define-public sqlcipher
|
||
(package
|
||
(name "sqlcipher")
|
||
(version "3.3.1")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/sqlcipher/" name
|
||
"/archive/v" version ".tar.gz"))
|
||
(sha256
|
||
(base32 "1gv58dlbpzrmznly52yqbxgvii0ib88zr3aszla1bsypwjr6flff"))
|
||
(file-name (string-append name "-" version ".tar.gz"))))
|
||
(build-system gnu-build-system)
|
||
(inputs
|
||
`(("libcrypto" ,openssl)
|
||
("libtcl8.6" ,tcl))) ; required for running the tests
|
||
(native-inputs
|
||
`(("tcl" ,tcl)))
|
||
(arguments
|
||
'(#:configure-flags
|
||
'("--enable-tempstore=yes"
|
||
"CFLAGS=-DSQLITE_HAS_CODEC -DSQLITE_ENABLE_FTS3"
|
||
"LDFLAGS=-lcrypto -ltcl8.6"
|
||
"--disable-tcl")
|
||
;; tests cannot be run from the Makefile
|
||
;; see: <https://github.com/sqlcipher/sqlcipher/issues/172>
|
||
#:test-target "testfixture"
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'check 'build-test-runner
|
||
(assoc-ref %standard-phases 'check))
|
||
(replace 'check
|
||
(lambda _
|
||
(zero?
|
||
(system* "./testfixture" "test/crypto.test")))))))
|
||
(home-page "https://www.zetetic.net/sqlcipher/")
|
||
(synopsis
|
||
"Library providing transparent encryption of SQLite database files")
|
||
(description "SQLCipher is an implementation of SQLite, extended to
|
||
provide transparent 256-bit AES encryption of database files. Pages are
|
||
encrypted before being written to disk and are decrypted when read back. It’s
|
||
well suited for protecting embedded application databases and for mobile
|
||
development.")
|
||
;; The source files
|
||
;; src/{crypto.c,crypto_impl.c,crypto.h,crypto_cc.c,crypto_libtomcrypt.c},
|
||
;; src/{crypto_openssl.c,sqlcipher.h}, tool/crypto-speedtest.tcl,
|
||
;; test/crypto.test are licensed under a 3-clause BSD license. All other
|
||
;; source files are in the public domain.
|
||
(license (list license:public-domain license:bsd-3))))
|
||
|
||
(define-public python-pyodbc-c
|
||
(package
|
||
(name "python-pyodbc-c")
|
||
(version "3.1.4")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://gitlab.com/daym/pyodbc-c/repository/"
|
||
"archive.tar.gz?ref=v" version))
|
||
(sha256
|
||
(base32
|
||
"05aq2297k779xidmxcwkrrxjvj1bh2q7d9a1rcjv6zr15y764ga9"))
|
||
(file-name (string-append name "-" version ".tar.gz"))))
|
||
(build-system python-build-system)
|
||
(inputs
|
||
`(("unixodbc" ,unixodbc)))
|
||
(arguments
|
||
`(;; No unit tests exist.
|
||
#:tests? #f))
|
||
(home-page "https://github.com/mkleehammer/pyodbc")
|
||
(synopsis "Python ODBC Library")
|
||
(description "@code{python-pyodbc-c} provides a Python DB-API driver
|
||
for ODBC.")
|
||
(license (license:x11-style "file://LICENSE.TXT"))))
|
||
|
||
(define-public python2-pyodbc-c
|
||
(package-with-python2 python-pyodbc-c))
|
||
|
||
(define-public python-pyodbc
|
||
(package
|
||
(name "python-pyodbc")
|
||
(version "4.0.24")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "pyodbc" version))
|
||
(sha256
|
||
(base32
|
||
"1m311vi7vpay1j7rkq71fpsk0gb7454k4lldk5b63hyy6yvsn9j3"))
|
||
(file-name (string-append name "-" version ".tar.gz"))))
|
||
(build-system python-build-system)
|
||
(inputs
|
||
`(("unixodbc" ,unixodbc)))
|
||
(arguments
|
||
`(;; No unit tests exist.
|
||
#:tests? #f))
|
||
(home-page "https://github.com/mkleehammer/pyodbc")
|
||
(synopsis "Python ODBC Library")
|
||
(description "@code{python-pyodbc} provides a Python DB-API driver
|
||
for ODBC.")
|
||
(license (license:x11-style "file:///LICENSE.TXT"))))
|
||
|
||
(define-public python2-pyodbc
|
||
(package-with-python2 python-pyodbc))
|
||
|
||
(define-public mdbtools
|
||
(package
|
||
(name "mdbtools")
|
||
(version "0.7.1")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/brianb/mdbtools/archive/"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"05hbmxcq173kzb899gdi3bz2qcc1vi3n1qbbkwpsvrq7ggf11wyw"))
|
||
(file-name (string-append name "-" version ".tar.gz"))))
|
||
(build-system gnu-build-system)
|
||
(inputs
|
||
`(("glib" ,glib)))
|
||
(native-inputs
|
||
`(("autoconf" ,autoconf)
|
||
("automake" ,automake)
|
||
("libtool" ,libtool)
|
||
("pkg-config" ,pkg-config)
|
||
("txt2man" ,txt2man)
|
||
("which" ,which)))
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'autoreconf
|
||
(lambda _
|
||
(zero? (system* "autoreconf" "-vfi")))))))
|
||
(home-page "http://mdbtools.sourceforge.net/")
|
||
(synopsis "Read Microsoft Access databases")
|
||
(description "MDB Tools is a set of tools and applications to read the
|
||
proprietary MDB file format used in Microsoft's Access database package. This
|
||
includes programs to export schema and data from Microsoft's Access database
|
||
file format to other databases such as MySQL, Oracle, Sybase, PostgreSQL,
|
||
etc., and an SQL engine for performing simple SQL queries.")
|
||
(license (list license:lgpl2.0
|
||
license:gpl2+))))
|
||
|
||
(define-public python-lmdb
|
||
(package
|
||
(name "python-lmdb")
|
||
(version "0.94")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "lmdb" version))
|
||
(sha256
|
||
(base32
|
||
"1zh38gvkqw1jm5105if6rr7ccbgyxr7k2rm5ygb9ab3bq82pyaww"))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
;; Delete bundled lmdb source files.
|
||
'(begin
|
||
(for-each delete-file (list "lib/lmdb.h"
|
||
"lib/mdb.c"
|
||
"lib/midl.c"
|
||
"lib/midl.h"))
|
||
#t))))
|
||
(build-system python-build-system)
|
||
(inputs
|
||
`(("lmdb" ,lmdb)))
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'build 'use-system-lmdb
|
||
(lambda* (#:key inputs #:allow-other-keys)
|
||
(let ((lmdb (assoc-ref inputs "lmdb")))
|
||
(setenv "LMDB_FORCE_SYSTEM" "set")
|
||
(setenv "LMDB_INCLUDEDIR" (string-append lmdb "/include"))
|
||
(setenv "LMDB_LIBDIR" (string-append lmdb "/lib"))
|
||
#t))))
|
||
;; Tests fail with: ‘lmdb.tool: Please specify environment (--env)’.
|
||
#:tests? #f))
|
||
(home-page "https://github.com/dw/py-lmdb")
|
||
(synopsis "Python binding for the ‘Lightning’ database (LMDB)")
|
||
(description
|
||
"python-lmdb or py-lmdb is a Python binding for the @dfn{Lightning
|
||
Memory-Mapped Database} (LMDB), a high-performance key-value store.")
|
||
(license
|
||
(list license:openldap2.8
|
||
;; ‘lib/win32/inttypes.h’ and ‘lib/win32-stdint/stdint.h’ are BSD-3,
|
||
;; but not actually needed on platforms currently supported by Guix.
|
||
license:bsd-3))))
|
||
|
||
(define-public python2-lmdb
|
||
(package-with-python2 python-lmdb))
|
||
|
||
(define-public python-orator
|
||
(package
|
||
(name "python-orator")
|
||
(version "0.9.7")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "orator" version))
|
||
(sha256
|
||
(base32
|
||
"14r58z64fdp76ixnvmi4lni762b405ynmsx6chr1qihs3yl9zn6c"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'loosen-dependencies
|
||
;; Tests are not actually run since they are not included with the
|
||
;; distributed package, but dependencies are checked.
|
||
(lambda _
|
||
(substitute* "setup.py"
|
||
((",<.*'") "'")
|
||
(("flexmock==0.9.7") "flexmock")
|
||
;; The pytest-mock package is out of date, so we remove minimum
|
||
;; version requirement.
|
||
(("pytest-mock.*'") "pytest-mock'"))
|
||
#t)))))
|
||
(native-inputs
|
||
`(("python-pytest-mock" ,python-pytest-mock)
|
||
("python-pytest" ,python-pytest)
|
||
("python-flexmock" ,python-flexmock)))
|
||
(propagated-inputs
|
||
`(("python-backpack" ,python-backpack)
|
||
("python-blinker" ,python-blinker)
|
||
("python-cleo" ,python-cleo)
|
||
("python-faker" ,python-faker)
|
||
("python-inflection" ,python-inflection)
|
||
("python-lazy-object-proxy" ,python-lazy-object-proxy)
|
||
("python-pendulum" ,python-pendulum)
|
||
("python-pyaml" ,python-pyaml)
|
||
("python-pygments" ,python-pygments)
|
||
("python-simplejson" ,python-simplejson)
|
||
("python-six" ,python-six)
|
||
("python-wrapt" ,python-wrapt)))
|
||
(home-page "https://orator-orm.com/")
|
||
(synopsis "ActiveRecord ORM for Python")
|
||
(description
|
||
"Orator provides a simple ActiveRecord-like Object Relational Mapping
|
||
implementation for Python.")
|
||
(license license:expat)
|
||
(properties `((python2-variant . ,(delay python2-orator))))))
|
||
|
||
(define-public python2-orator
|
||
(package-with-python2 (strip-python2-variant python-orator)))
|
||
|
||
(define-public virtuoso-ose
|
||
(package
|
||
(name "virtuoso-ose")
|
||
(version "7.2.5")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"https://github.com/openlink/virtuoso-opensource/releases/"
|
||
"download/v" version "/virtuoso-opensource-" version ".tar.gz"))
|
||
(sha256
|
||
(base32 "0r1xakclkfi69pzh8z2k16z3x0m49pxp764icj0ad4w4bb97fr42"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:tests? #f ; Tests require a network connection.
|
||
;; TODO: Removing the libsrc/zlib source directory breaks the build.
|
||
;; This indicates that the internal zlib code may still be used.
|
||
#:configure-flags '("--without-internal-zlib"
|
||
"--with-readline")))
|
||
(inputs
|
||
`(("openssl" ,openssl)
|
||
("net-tools" ,net-tools)
|
||
("readline" ,readline)
|
||
("zlib" ,zlib)))
|
||
(home-page "http://vos.openlinksw.com/owiki/wiki/VOS/")
|
||
(synopsis "Multi-model database system")
|
||
(description "Virtuoso is a scalable cross-platform server that combines
|
||
relational, graph, and document data management with web application server
|
||
and web services platform functionality.")
|
||
;; configure: error: ... can only be build on 64bit platforms
|
||
(supported-systems '("x86_64-linux" "mips64el-linux" "aarch64-linux"))
|
||
(license license:gpl2)))
|
||
|
||
(define-public r-rmysql
|
||
(package
|
||
(name "r-rmysql")
|
||
(version "0.10.15")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (cran-uri "RMySQL" version))
|
||
(sha256
|
||
(base32
|
||
"0bmc7w5fnkjaf333sgc0hskiy332m9gmfaxg0yzkjxscpizdw43n"))))
|
||
(properties `((upstream-name . "RMySQL")))
|
||
(build-system r-build-system)
|
||
(native-inputs
|
||
`(("pkg-config" ,pkg-config)))
|
||
(inputs
|
||
`(("mariadb" ,mariadb)
|
||
("zlib" ,zlib)))
|
||
(propagated-inputs
|
||
`(("r-dbi" ,r-dbi)))
|
||
(home-page "https://github.com/r-dbi/RMySQL")
|
||
(synopsis "Database interface and MySQL driver for R")
|
||
(description
|
||
"This package provides a DBI interface to MySQL / MariaDB. The RMySQL
|
||
package contains an old implementation based on legacy code from S-PLUS which
|
||
is being phased out. A modern MySQL client based on Rcpp is available from
|
||
the RMariaDB package.")
|
||
(license license:gpl2)))
|
||
|
||
(define-public python-ccm
|
||
(package
|
||
(name "python-ccm")
|
||
(version "2.1.6")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "ccm" version))
|
||
(sha256
|
||
(base32
|
||
"177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
|
||
`(("python-pyyaml" ,python-pyyaml)
|
||
;; Not listed in setup.py, but used in ccmlib/node.py for full
|
||
;; functionality
|
||
("python-psutil" ,python-psutil)
|
||
("python-six" ,python-six)))
|
||
(home-page "https://github.com/pcmanus/ccm")
|
||
(synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on
|
||
localhost")
|
||
(description "Cassandra Cluster Manager is a development tool for testing
|
||
local Cassandra clusters. It creates, launches and removes Cassandra clusters
|
||
on localhost.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python2-ccm
|
||
(package-with-python2 python-ccm))
|
||
|
||
(define-public python2-pysqlite
|
||
(package
|
||
(name "python2-pysqlite")
|
||
(version "2.8.3")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "pysqlite" version))
|
||
(sha256
|
||
(base32
|
||
"1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp"))))
|
||
(build-system python-build-system)
|
||
(inputs
|
||
`(("sqlite" ,sqlite)))
|
||
(arguments
|
||
`(#:python ,python-2 ; incompatible with Python 3
|
||
#:tests? #f)) ; no test target
|
||
(home-page "https://github.com/ghaering/pysqlite")
|
||
(synopsis "SQLite bindings for Python")
|
||
(description
|
||
"Pysqlite provides SQLite bindings for Python that comply to the
|
||
Database API 2.0T.")
|
||
(license license:zlib)))
|
||
|
||
(define-public python-sqlalchemy
|
||
(package
|
||
(name "python-sqlalchemy")
|
||
(version "1.2.11")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://pypi.python.org/packages/source/S/"
|
||
"SQLAlchemy/SQLAlchemy-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"094mmbs4igrxplfyqd59j90jb83ixpbbzqc0w49yw81m82nnjrgg"))))
|
||
(build-system python-build-system)
|
||
(native-inputs
|
||
`(("python-cython" ,python-cython) ;for c extensions
|
||
("python-pytest" ,python-pytest)
|
||
("python-mock" ,python-mock))) ;for tests
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(replace 'check
|
||
(lambda _ (invoke "py.test"))))))
|
||
(home-page "http://www.sqlalchemy.org")
|
||
(synopsis "Database abstraction library")
|
||
(description
|
||
"SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that
|
||
gives application developers the full power and flexibility of SQL. It
|
||
provides a full suite of well known enterprise-level persistence patterns,
|
||
designed for efficient and high-performing database access, adapted into a
|
||
simple and Pythonic domain language.")
|
||
(license license:x11)))
|
||
|
||
(define-public python2-sqlalchemy
|
||
(package-with-python2 python-sqlalchemy))
|
||
|
||
(define-public python-sqlalchemy-utils
|
||
(package
|
||
(name "python-sqlalchemy-utils")
|
||
(version "0.32.21")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "SQLAlchemy-Utils" version))
|
||
(sha256
|
||
(base32
|
||
"1myn71dn8j74xglyh46f12sh8ywb7j0j732rzwq70kvwwnq32m73"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
'(#:tests? #f)) ; FIXME: Many tests require a running database server.
|
||
;; #:phases
|
||
;; (modify-phases %standard-phases
|
||
;; (replace 'check
|
||
;; (lambda _
|
||
;; (zero? (system* "py.test" "sqlalchemy_utils" "tests")))))
|
||
(propagated-inputs
|
||
`(("python-six" ,python-six)
|
||
("python-sqlalchemy" ,python-sqlalchemy)))
|
||
(native-inputs
|
||
`(("python-dateutil" ,python-dateutil)
|
||
("python-flexmock" ,python-flexmock)
|
||
("python-psycopg2" ,python-psycopg2)
|
||
("python-pytest" ,python-pytest)
|
||
("python-pytz" ,python-pytz)))
|
||
(home-page "https://github.com/kvesteri/sqlalchemy-utils")
|
||
(synopsis "Various utility functions for SQLAlchemy")
|
||
(description
|
||
"SQLAlchemy-utils provides various utility functions and custom data types
|
||
for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python.
|
||
|
||
You might also want to install the following optional dependencies:
|
||
@enumerate
|
||
@item @code{python-passlib}
|
||
@item @code{python-babel}
|
||
@item @code{python-cryptography}
|
||
@item @code{python-pytz}
|
||
@item @code{python-psycopg2}
|
||
@item @code{python-furl}
|
||
@item @code{python-flask-babel}
|
||
@end enumerate
|
||
")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-sqlalchemy-utils
|
||
(package-with-python2 python-sqlalchemy-utils))
|
||
|
||
(define-public python-alembic
|
||
(package
|
||
(name "python-alembic")
|
||
(version "0.9.6")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "alembic" version))
|
||
(sha256
|
||
(base32
|
||
"0cm73vabrqj92v7a0wwvldj8j7bc7dwv358kvkk7p87gx7mm2a04"))))
|
||
(build-system python-build-system)
|
||
(native-inputs
|
||
`(("python-mock" ,python-mock)
|
||
("python-pytest-cov" ,python-pytest-cov)))
|
||
(propagated-inputs
|
||
`(("python-dateutil" ,python-dateutil)
|
||
("python-sqlalchemy" ,python-sqlalchemy)
|
||
("python-mako" ,python-mako)
|
||
("python-editor" ,python-editor)))
|
||
(home-page "https://bitbucket.org/zzzeek/alembic")
|
||
(synopsis
|
||
"Database migration tool for SQLAlchemy")
|
||
(description
|
||
"Alembic is a lightweight database migration tool for usage with the
|
||
SQLAlchemy Database Toolkit for Python.")
|
||
(license license:expat)))
|
||
|
||
(define-public python2-alembic
|
||
(package-with-python2 python-alembic))
|
||
|
||
(define-public python-pickleshare
|
||
(package
|
||
(name "python-pickleshare")
|
||
(version "0.7.5")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "pickleshare" version))
|
||
(sha256
|
||
(base32 "1jmghg3c53yp1i8cm6pcrm280ayi8621rwyav9fac7awjr3kss47"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:phases (modify-phases %standard-phases
|
||
(replace 'check
|
||
(lambda _
|
||
(invoke "pytest"))))))
|
||
(native-inputs
|
||
`(("python-pytest" ,python-pytest)))
|
||
(home-page "https://github.com/vivainio/pickleshare")
|
||
(synopsis "Tiny key value database with concurrency support")
|
||
(description
|
||
"PickleShare is a small ‘shelve’-like datastore with concurrency support.
|
||
Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike
|
||
shelve, many processes can access the database simultaneously. Changing a
|
||
value in database is immediately visible to other processes accessing the same
|
||
database. Concurrency is possible because the values are stored in separate
|
||
files. Hence the “database” is a directory where all files are governed by
|
||
PickleShare.")
|
||
(properties `((python2-variant . ,(delay python2-pickleshare))))
|
||
(license license:expat)))
|
||
|
||
(define-public python2-pickleshare
|
||
(let ((pickleshare (package-with-python2
|
||
(strip-python2-variant python-pickleshare))))
|
||
(package (inherit pickleshare)
|
||
(propagated-inputs `(("python2-pathlib2" ,python2-pathlib2)
|
||
,@(package-propagated-inputs pickleshare))))))
|
||
|
||
(define-public python-apsw
|
||
(package
|
||
(name "python-apsw")
|
||
(version "3.20.1-r1")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/rogerbinns/apsw/archive/"
|
||
version ".tar.gz"))
|
||
(file-name (string-append "apsw-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"00ai7m2pqi26qaflhz314d8k5i3syw7xzr145fhfl0crhyh6adz2"))))
|
||
(build-system python-build-system)
|
||
(inputs
|
||
`(("sqlite" ,sqlite)))
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(replace 'build
|
||
(lambda _
|
||
(invoke "python" "setup.py" "build" "--enable-all-extensions")
|
||
#t))
|
||
(add-after 'build 'build-test-helper
|
||
(lambda _
|
||
(invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
|
||
"-I." "-Isqlite3" "src/testextension.c")
|
||
#t))
|
||
(delete 'check)
|
||
(add-after 'install 'check
|
||
(lambda* (#:key inputs outputs #:allow-other-keys)
|
||
(add-installed-pythonpath inputs outputs)
|
||
(invoke "python" "setup.py" "test")
|
||
#t)))))
|
||
(home-page "https://github.com/rogerbinns/apsw/")
|
||
(synopsis "Another Python SQLite Wrapper")
|
||
(description "APSW is a Python wrapper for the SQLite
|
||
embedded relational database engine. In contrast to other wrappers such as
|
||
pysqlite it focuses on being a minimal layer over SQLite attempting just to
|
||
translate the complete SQLite API into Python.")
|
||
(license license:zlib)))
|
||
|
||
(define-public python2-apsw
|
||
(package-with-python2 python-apsw))
|
||
|
||
(define-public python2-neo4j-driver
|
||
(package
|
||
(name "python2-neo4j-driver")
|
||
;; NOTE: When upgrading to 1.5.0, please add a python3 variant.
|
||
(version "1.4.0")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "neo4j-driver" version))
|
||
(sha256
|
||
(base32
|
||
"011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:python ,python-2))
|
||
(home-page "https://neo4j.com/developer/python/")
|
||
(synopsis "Neo4j driver code written in Python")
|
||
(description "This package provides the Neo4j Python driver that connects
|
||
to the database using Neo4j's binary protocol. It aims to be minimal, while
|
||
being idiomatic to Python.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python2-py2neo
|
||
(package
|
||
(name "python2-py2neo")
|
||
(version "3.1.2")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "py2neo" version))
|
||
(sha256
|
||
(base32
|
||
"1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:python ,python-2))
|
||
(home-page "http://py2neo.org")
|
||
(synopsis "Library and toolkit for working with Neo4j in Python")
|
||
(description "This package provides a client library and toolkit for
|
||
working with Neo4j from within Python applications and from the command
|
||
line. The core library has no external dependencies and has been carefully
|
||
designed to be easy and intuitive to use.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python-psycopg2
|
||
(package
|
||
(name "python-psycopg2")
|
||
(version "2.7.5")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "psycopg2" version))
|
||
(sha256
|
||
(base32
|
||
"17klx964gw8z0znl0raz3by8vdc7cq5gxj4pdcrfcina84nrdkzc"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
;; Tests would require a postgresql database "psycopg2_test"
|
||
;; and a running postgresql database management service.
|
||
`(#:tests? #f)) ; TODO re-enable after providing a test-db.
|
||
(inputs
|
||
`(("postgresql" ,postgresql))) ; libpq
|
||
(home-page "http://initd.org/psycopg/")
|
||
(synopsis "Python PostgreSQL adapter")
|
||
(description
|
||
"psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API
|
||
2.0.")
|
||
(license license:lgpl3+)))
|
||
|
||
(define-public python2-psycopg2
|
||
(package-with-python2 python-psycopg2))
|
||
|
||
(define-public python-sadisplay
|
||
(package
|
||
(name "python-sadisplay")
|
||
(version "0.4.8")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "sadisplay" version))
|
||
(sha256
|
||
(base32
|
||
"01d9lxhmgpb68gy8rd6zj6fcwp84n2qq210n1qsk3qbsir79bzh4"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
|
||
`(("python-sqlalchemy" ,python-sqlalchemy)))
|
||
(native-inputs
|
||
;; For tests.
|
||
`(("python-nose" ,python-nose)))
|
||
(home-page "https://bitbucket.org/estin/sadisplay")
|
||
(synopsis "SQLAlchemy schema displayer")
|
||
(description "This package provides a program to build Entity
|
||
Relationship diagrams from a SQLAlchemy model (or directly from the
|
||
database).")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-sadisplay
|
||
(package-with-python2 python-sadisplay))
|
||
|
||
(define-public python-mysqlclient
|
||
(package
|
||
(name "python-mysqlclient")
|
||
(version "1.3.13")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "mysqlclient" version))
|
||
(sha256
|
||
(base32
|
||
"0kv4a1icwdav8jpl7qvnr931lw5h3v22ids6lwq6qpi1hjzf33pz"))))
|
||
(build-system python-build-system)
|
||
(native-inputs
|
||
`(("mariadb" ,mariadb)
|
||
("nose" ,python-nose)
|
||
("mock" ,python-mock)
|
||
("py.test" ,python-pytest)))
|
||
(inputs
|
||
`(("mysql" ,mysql)
|
||
("libz" ,zlib)
|
||
("openssl" ,openssl)))
|
||
(home-page "https://github.com/PyMySQL/mysqlclient-python")
|
||
(synopsis "MySQLdb is an interface to the popular MySQL database server for Python")
|
||
(description "MySQLdb is an interface to the popular MySQL database server
|
||
for Python. The design goals are:
|
||
@enumerate
|
||
@item Compliance with Python database API version 2.0 [PEP-0249],
|
||
@item Thread-safety,
|
||
@item Thread-friendliness (threads will not block each other).
|
||
@end enumerate")
|
||
(license license:gpl2)))
|
||
|
||
(define-public python2-mysqlclient
|
||
(package-with-python2 python-mysqlclient))
|
||
|
||
(define-public python-hiredis
|
||
(package
|
||
(name "python-hiredis")
|
||
(version "0.2.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "hiredis" version))
|
||
(sha256
|
||
(base32
|
||
"1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
;; no tests
|
||
`(#:tests? #f))
|
||
(home-page "https://github.com/redis/hiredis-py")
|
||
(synopsis "Python extension that wraps protocol parsing code in hiredis")
|
||
(description "Python-hiredis is a python extension that wraps protocol
|
||
parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-hiredis
|
||
(package-with-python2 python-hiredis))
|
||
|
||
(define-public python-fakeredis
|
||
(package
|
||
(name "python-fakeredis")
|
||
(version "0.8.2")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "fakeredis" version))
|
||
(sha256
|
||
(base32
|
||
"0zncahj3byyasyfx9i7k991ph0n0lq8v3a21pqri5qxn9564bk9r"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
;; no tests
|
||
`(#:tests? #f))
|
||
(home-page "https://github.com/jamesls/fakeredis")
|
||
(synopsis "Fake implementation of redis API for testing purposes")
|
||
(description
|
||
"Fakeredis is a pure-Python implementation of the redis-py Python client
|
||
that simulates talking to a redis server. It was created for a single purpose:
|
||
to write unit tests.
|
||
|
||
Setting up redis is not hard, but one often wants to write unit tests that don't
|
||
talk to an external server such as redis. This module can be used as a
|
||
reasonable substitute.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-fakeredis
|
||
(package-with-python2 python-fakeredis))
|
||
|
||
(define-public python-redis
|
||
(package
|
||
(name "python-redis")
|
||
(version "2.10.6")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "redis" version))
|
||
(sha256
|
||
(base32 "03vcgklykny0g0wpvqmy8p6azi2s078317wgb2xjv5m2rs9sjb52"))))
|
||
(build-system python-build-system)
|
||
;; Tests require a running Redis server
|
||
(arguments '(#:tests? #f))
|
||
;; As long as we are not running test, we do not need this input :-)
|
||
;;(native-inputs
|
||
;; `(("python-pytest" ,python-pytest)))
|
||
(home-page "https://github.com/andymccurdy/redis-py")
|
||
(synopsis "Redis Python client")
|
||
(description
|
||
"This package provides a Python interface to the Redis key-value store.")
|
||
(license license:expat)))
|
||
|
||
(define-public python2-redis
|
||
(package-with-python2 python-redis))
|
||
|
||
(define-public python-rq
|
||
(package
|
||
(name "python-rq")
|
||
(version "0.7.1")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "rq" version))
|
||
(sha256
|
||
(base32 "0gaq5pnh0zy46r8jvygi0ifbvz3pq6i7xla78ijcgjw0x77qzsdh"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
|
||
`(("python-click" ,python-click)
|
||
("python-redis" ,python-redis)))
|
||
(home-page "http://python-rq.org/")
|
||
(synopsis "Simple job queues for Python")
|
||
(description
|
||
"RQ (Redis Queue) is a simple Python library for queueing jobs and
|
||
processing them in the background with workers. It is backed by Redis and it
|
||
is designed to have a low barrier to entry.")
|
||
(license license:bsd-2)))
|
||
|
||
(define-public python2-rq
|
||
(package-with-python2 python-rq))
|
||
|
||
(define-public python-trollius-redis
|
||
(package
|
||
(name "python-trollius-redis")
|
||
(version "0.1.4")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "trollius_redis" version))
|
||
(sha256
|
||
(base32
|
||
"0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy"))))
|
||
(build-system python-build-system)
|
||
;; TODO: Tests require packaging 'hiredis'.
|
||
(arguments '(#:tests? #f))
|
||
(home-page "https://github.com/benjolitz/trollius-redis")
|
||
(synopsis "Port of asyncio-redis to trollius")
|
||
(description "@code{trollius-redis} is a Redis client for Python
|
||
trollius. It is an asynchronious IO (PEP 3156) implementation of the
|
||
Redis protocol.")
|
||
(license license:bsd-2)))
|
||
|
||
(define-public python2-trollius-redis
|
||
(package-with-python2 python-trollius-redis))
|
||
|
||
(define-public python-sqlparse
|
||
(package
|
||
(name "python-sqlparse")
|
||
(version "0.2.4")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "sqlparse" version))
|
||
(sha256
|
||
(base32
|
||
"1v3xh0bkfhb262dbndgzhivpnhdwavdzz8jjhx9vx0xbrx2880nf"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(replace 'check
|
||
(lambda _ (zero? (system* "py.test")))))))
|
||
(native-inputs
|
||
`(("python-pytest" ,python-pytest)))
|
||
(home-page "https://github.com/andialbrecht/sqlparse")
|
||
(synopsis "Non-validating SQL parser")
|
||
(description "Sqlparse is a non-validating SQL parser for Python. It
|
||
provides support for parsing, splitting and formatting SQL statements.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-sqlparse
|
||
(package-with-python2 python-sqlparse))
|
||
|
||
(define-public python-sql
|
||
(package
|
||
(name "python-sql")
|
||
(version "0.9")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "python-sql" version))
|
||
(sha256
|
||
(base32
|
||
"0p6kaqj02vz0habmdx37zjk6hjxdfm8aw737zs059vvpr70ird87"))))
|
||
(build-system python-build-system)
|
||
(home-page "https://python-sql.tryton.org/")
|
||
(synopsis "Library to write SQL queries in a pythonic way")
|
||
(description "@code{python-sql} is a library to write SQL queries, that
|
||
transforms idiomatic python function calls to well-formed SQL queries.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python2-sql
|
||
(package-with-python2 python-sql))
|
||
|
||
(define-public mongo-tools
|
||
(package
|
||
(name "mongo-tools")
|
||
(version "3.4.0")
|
||
(source
|
||
(origin (method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/mongodb/mongo-tools")
|
||
(commit (string-append "r" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1bcsz5cvj39a7nsxsfqmz9igrw33j6yli9kffigqyscs52amw7x1"))))
|
||
(build-system go-build-system)
|
||
(arguments
|
||
`(#:import-path "github.com/mongodb/mongo-tools"
|
||
#:modules ((srfi srfi-1)
|
||
(guix build go-build-system)
|
||
(guix build utils))
|
||
#:phases
|
||
(let ((all-tools
|
||
'("bsondump" "mongodump" "mongoexport" "mongofiles"
|
||
"mongoimport" "mongooplog" "mongorestore"
|
||
"mongostat" "mongotop")))
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'delete-bundled-source-code
|
||
(lambda _
|
||
(delete-file-recursively
|
||
"src/github.com/mongodb/mongo-tools/vendor")
|
||
#t))
|
||
;; We don't need to install the source code for end-user applications
|
||
(delete 'install-source)
|
||
(replace 'build
|
||
(lambda _
|
||
(every (lambda (tool)
|
||
(let ((command
|
||
`("go" "build"
|
||
;; This is where the tests expect to find the
|
||
;; executables
|
||
"-o" ,(string-append
|
||
"src/github.com/mongodb/mongo-tools/bin/"
|
||
tool)
|
||
"-v"
|
||
"-tags=\"ssl sasl\""
|
||
"-ldflags"
|
||
"-extldflags=-Wl,-z,now,-z,relro"
|
||
,(string-append
|
||
"src/github.com/mongodb/mongo-tools/"
|
||
tool "/main/" tool ".go"))))
|
||
(simple-format #t "build: running ~A\n"
|
||
(string-join command))
|
||
(apply invoke command)))
|
||
all-tools)))
|
||
(replace 'check
|
||
(lambda _
|
||
(with-directory-excursion "src"
|
||
(every (lambda (tool)
|
||
(invoke
|
||
"go" "test" "-v"
|
||
(string-append "github.com/mongodb/mongo-tools/" tool)))
|
||
all-tools))))
|
||
(replace 'install
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(for-each (lambda (tool)
|
||
(install-file
|
||
(string-append "src/github.com/mongodb/mongo-tools/bin/" tool)
|
||
(string-append (assoc-ref outputs "out")
|
||
"/bin")))
|
||
all-tools)))))))
|
||
(native-inputs
|
||
`(("go-github.com-howeyc-gopass" ,go-github.com-howeyc-gopass)
|
||
("go-github.com-jessevdk-go-flags" ,go-github.com-jessevdk-go-flags)
|
||
("go-golang.org-x-crypto-ssh-terminal" ,go-golang.org-x-crypto-ssh-terminal)
|
||
("go-gopkg.in-mgo.v2" ,go-gopkg.in-mgo.v2)
|
||
("go-gopkg.in-tomb.v2" ,go-gopkg.in-tomb.v2)
|
||
("go-github.com-nsf-termbox-go" ,go-github.com-nsf-termbox-go)
|
||
("go-github.com-smartystreets-goconvey" ,go-github.com-smartystreets-goconvey)))
|
||
(home-page "https://github.com/mongodb/mongo-tools")
|
||
(synopsis "Various tools for interacting with MongoDB and BSON")
|
||
(description
|
||
"This package includes a collection of tools related to MongoDB.
|
||
@table @code
|
||
@item bsondump
|
||
Display BSON files in a human-readable format
|
||
@item mongoimport
|
||
Convert data from JSON, TSV or CSV and insert them into a collection
|
||
@item mongoexport
|
||
Write an existing collection to CSV or JSON format
|
||
@item mongodump/mongorestore
|
||
Dump MongoDB backups to disk in the BSON format
|
||
@item mongorestore
|
||
Read MongoDB backups in the BSON format, and restore them to a live database
|
||
@item mongostat
|
||
Monitor live MongoDB servers, replica sets, or sharded clusters
|
||
@item mongofiles
|
||
Read, write, delete, or update files in GridFS
|
||
@item mongooplog
|
||
Replay oplog entries between MongoDB servers
|
||
@item mongotop
|
||
Monitor read/write activity on a mongo server
|
||
@end table")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public apache-arrow
|
||
(package
|
||
(name "apache-arrow")
|
||
(version "0.7.0")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/apache/arrow")
|
||
(commit (string-append "apache-arrow-" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1x7sdd8lbs3nfqjql1pcgbkjc19bls56zmgjayshkmablvlc4dy3"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
`(#:tests? #f
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'configure 'enter-source-directory
|
||
(lambda _ (chdir "cpp") #t))
|
||
(add-after 'unpack 'set-env
|
||
(lambda _
|
||
(setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost"))
|
||
(setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli"))
|
||
(setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers"))
|
||
(setenv "JEMALLOC_HOME" (assoc-ref %build-inputs "jemalloc"))
|
||
(setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
|
||
#t)))
|
||
#:build-type "Release"
|
||
#:configure-flags
|
||
(list "-DARROW_PYTHON=ON"
|
||
|
||
;; Install to PREFIX/lib (the default is
|
||
;; PREFIX/lib64).
|
||
(string-append "-DCMAKE_INSTALL_LIBDIR="
|
||
(assoc-ref %outputs "out")
|
||
"/lib")
|
||
|
||
;; XXX These Guix package offer static
|
||
;; libraries that are not position independent,
|
||
;; and ld fails to link them into the arrow .so
|
||
"-DARROW_WITH_SNAPPY=OFF"
|
||
"-DARROW_WITH_ZLIB=OFF"
|
||
"-DARROW_WITH_ZSTD=OFF"
|
||
"-DARROW_WITH_LZ4=OFF"
|
||
|
||
;; Building the tests forces on all the
|
||
;; optional features and the use of static
|
||
;; libraries.
|
||
"-DARROW_BUILD_TESTS=OFF"
|
||
"-DARROW_BUILD_STATIC=OFF")))
|
||
(inputs
|
||
`(("boost" ,boost)
|
||
("rapidjson" ,rapidjson)
|
||
("brotli" ,google-brotli)
|
||
("flatbuffers" ,flatbuffers)
|
||
;; Arrow is not yet compatible with jemalloc >= 5:
|
||
;; https://issues.apache.org/jira/browse/ARROW-1141
|
||
("jemalloc" ,jemalloc-4.5.0)
|
||
("python-3" ,python)
|
||
("python-numpy" ,python-numpy)))
|
||
(home-page "https://arrow.apache.org/")
|
||
(synopsis "Columnar in-memory analytics")
|
||
(description "Apache Arrow is a columnar in-memory analytics layer
|
||
designed to accelerate big data. It houses a set of canonical in-memory
|
||
representations of flat and hierarchical data along with multiple
|
||
language-bindings for structure manipulation. It also provides IPC and common
|
||
algorithm implementations.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python-pyarrow
|
||
(package
|
||
(name "python-pyarrow")
|
||
(version "0.7.0")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/apache/arrow")
|
||
(commit (string-append "apache-arrow-" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1x7sdd8lbs3nfqjql1pcgbkjc19bls56zmgjayshkmablvlc4dy3"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
'(#:tests? #f ; XXX Test failures related to missing libhdfs, libhdfs3,
|
||
; and "Unsupported numpy type 22".
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'enter-source-directory
|
||
(lambda _ (chdir "python") #t))
|
||
(add-after 'unpack 'set-env
|
||
(lambda _
|
||
(setenv "ARROW_HOME" (assoc-ref %build-inputs "apache-arrow"))
|
||
#t)))))
|
||
(propagated-inputs
|
||
`(("apache-arrow" ,apache-arrow)
|
||
("python-numpy" ,python-numpy)
|
||
("python-pandas" ,python-pandas)
|
||
("python-six" ,python-six)))
|
||
(native-inputs
|
||
`(("cmake" ,cmake)
|
||
("python-cython" ,python-cython)
|
||
("python-pytest" ,python-pytest)
|
||
("python-setuptools-scm" ,python-setuptools-scm)))
|
||
(home-page "https://arrow.apache.org/docs/python/")
|
||
(synopsis "Python bindings for Apache Arrow")
|
||
(description "This library provides a Pythonic API wrapper for the reference
|
||
Arrow C++ implementation, along with tools for interoperability with pandas,
|
||
NumPy, and other traditional Python scientific computing packages.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python2-pyarrow
|
||
(package-with-python2 python-pyarrow))
|