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guix-devel/gnu/packages
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Efraim Flashner 48409ef269
gnu: infernal: Limit to i686 and x86_64 systems. 
* gnu/packages/bioinformatics.scm (infernal)[supported-systems]: The
package requires VMX or SSE capability for parallel instructions, so
limit it to those supported systems.
 		2016-09-04 12:43:10 +03:00
..
bootstrap
…
patches Merge branch 'gtk-im-modules' 2016-09-04 08:19:10 +02:00
abduco.scm
…
abiword.scm
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acct.scm
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acl.scm
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admin.scm gnu: autojump: Fix failing tests. 2016-08-31 00:46:59 -05:00
adns.scm gnu: adns: Update to 1.5.1. 2016-08-13 20:24:43 +03:00
aidc.scm
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algebra.scm Rename references to (gnu packages tcsh). 2016-08-03 16:22:31 +02:00
animation.scm
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anthy.scm
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apl.scm gnu: apl: Update to 1.6. 2016-08-30 08:38:59 +03:00
apr.scm
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aspell.scm gnu: Add German Aspell dictionary. 2016-08-30 06:57:31 +02:00
assembly.scm
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astronomy.scm gnu: wcslib: Correct formatting and grammar. 2016-08-31 20:57:23 +02:00
attr.scm
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audacity.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
audio.scm gnu: qsynth: Build with gnu++11. 2016-08-22 01:49:52 +02:00
augeas.scm
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autogen.scm
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autotools.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
avahi.scm
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avr.scm gnu: avr: Use the correct gcc version as native-input. 2016-08-15 14:48:21 -04:00
backup.scm gnu: borg: Update to 1.0.7. 2016-08-19 18:42:09 -04:00
base.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
bash.scm gnu: bash-completion: Update to 2.3. Update the patch. 2016-08-09 09:23:38 +02:00
bdw-gc.scm
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benchmark.scm gnu: Add fio. 2016-08-14 13:05:03 -04:00
bioinformatics.scm gnu: infernal: Limit to i686 and x86_64 systems. 2016-09-04 12:43:10 +03:00
bison.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
bittorrent.scm gnu: aria2: Update to 1.26.1. 2016-09-03 23:48:46 +03:00
boost.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
bootstrap.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
busybox.scm
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c.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
calcurse.scm
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calendar.scm gnu: khal: Update to 0.8.3. 2016-08-29 18:39:44 -04:00
ccache.scm gnu: ccache: Update to 3.2.5. 2016-07-10 06:48:27 +03:00
cdrom.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
certs.scm gnu: nss-certs: Stop inheriting from nss package. 2016-07-22 17:10:11 +02:00
check.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ci.scm
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cmake.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
code.scm gnu: Add trio. 2016-08-01 14:06:03 +02:00
commencement.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
compression.scm gnu: Add snappy. 2016-08-18 13:06:22 +02:00
conkeror.scm
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conky.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
connman.scm
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cook.scm gnu: cook: Update source URL. 2016-07-23 22:19:11 +02:00
cpio.scm
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cppi.scm
…
cross-base.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
crypto.scm gnu: keyutils: Fix typo in synopsis. 2016-08-29 22:02:38 +02:00
cryptsetup.scm
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cups.scm gnu: hplip: Update to 3.16.8. 2016-08-29 11:47:48 +02:00
curl.scm gnu: curl: Replace with 7.50.1 [fixes CVE-2016-{3739,4802,5419,5420,5421]. 2016-08-04 12:57:36 -04:00
cyrus-sasl.scm
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databases.scm gnu: Add lmdb. 2016-08-18 13:06:21 +02:00
datamash.scm
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datastructures.scm gnu: Add ssdeep. 2016-07-19 23:03:30 +02:00
dav.scm gnu: vdirsyncer: Update to 0.12.1. 2016-08-24 14:50:12 -04:00
dc.scm
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debug.scm gnu: Add stress-make. 2016-08-13 11:00:45 -05:00
dejagnu.scm
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dico.scm gnu: dico: Update to 2.3. 2016-08-11 13:20:12 +03:00
dictionaries.scm
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dillo.scm
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disk.scm gnu: Add gparted. 2016-08-21 23:39:19 +02:00
display-managers.scm gnu: slim: Move to display-managers.scm. 2016-09-01 14:36:49 +02:00
djvu.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
dns.scm
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docbook.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
docker.scm
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documentation.scm gnu: asciidoc: Use local docbook-xsl package. 2016-08-21 17:42:57 -04:00
dunst.scm
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dvtm.scm
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ebook.scm gnu: calibre: Update to 2.63.0. 2016-07-27 23:45:16 +02:00
ed.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
education.scm gnu: Add GCompris. 2016-08-03 18:50:26 +02:00
elf.scm
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elixir.scm gnu: Add Elixir. 2016-08-02 18:31:29 +02:00
emacs.scm gnu: Add emacs-auto-complete. 2016-08-31 10:10:30 +03:00
enchant.scm
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engineering.scm gnu: fritzing: Use modular qt. 2016-08-18 13:12:25 +02:00
enlightenment.scm gnu: enlightenment: Move efl to inputs. 2016-08-26 17:39:42 +03:00
entr.scm gnu: entr: Update to 3.6. 2016-08-30 15:22:30 -04:00
erlang.scm
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fcitx.scm
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feh.scm
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figlet.scm
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file.scm
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finance.scm gnu: bitcoin-core: Use modular qt. 2016-08-18 13:12:25 +02:00
firmware.scm
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flashing-tools.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
flex.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
fltk.scm
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fonts.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
fontutils.scm gnu: fontconfig: Fix CVE-2016-5384. 2016-08-08 20:33:21 -04:00
freedesktop.scm gnu: Add telepathy-mission-control. 2016-09-01 11:24:51 -04:00
freeipmi.scm gnu: freeimpi: Update to 1.5.3. 2016-08-11 13:20:16 +03:00
fribidi.scm
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ftp.scm
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fvwm.scm
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game-development.scm gnu: tiled: Update to 0.17.0. 2016-08-24 09:57:22 -04:00
games.scm gnu: bambam: Remove wrap-binary phase. 2016-08-31 12:16:19 -05:00
gawk.scm
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gcal.scm
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gcc.scm gnu: gcc-6: Update to 6.2.0. 2016-08-23 08:26:28 +03:00
gd.scm gnu: gd: Add fix for gd2_read test. 2016-07-29 18:28:40 -04:00
gdb.scm
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geeqie.scm gnu: exiv2: Update source url. 2016-07-24 21:17:04 +03:00
geo.scm gnu: gnome-maps: Update to 3.18.3. 2016-08-19 17:52:31 -04:00
gettext.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ghostscript.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
gimp.scm gnu: gimp: Fix python plugin. 2016-08-21 08:28:42 +08:00
gkrellm.scm
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gl.scm gnu: guile-opengl: Use https URL. 2016-08-30 03:23:59 -04:00
glib.scm
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gnome.scm Revert "gnu: yelp: Update to 3.21.3" 2016-09-03 16:25:47 +02:00
gnu-doc.scm
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gnu-pw-mgr.scm
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gnucash.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
gnunet.scm gnu: guile-gnunet: Use https URL. 2016-08-30 03:25:08 -04:00
gnupg.scm gnu: python-gnupg: Fix broken tests. 2016-08-26 23:58:55 +02:00
gnustep.scm gnu: Remove trailing periods from synopsis. 2016-07-29 17:37:22 +02:00
gnuzilla.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
golang.scm gnu: Add Go 1.6. 2016-08-01 01:11:57 +02:00
gperf.scm
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gprolog.scm
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gps.scm gnu: gpsbabel: Build with gnu++11. 2016-08-22 01:49:52 +02:00
graphics.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
graphviz.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
groff.scm
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grub.scm gnu: grub: Use https URL. 2016-08-30 03:24:03 -04:00
gsasl.scm
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gstreamer.scm gnu: gstreamer: Use license: prefix. 2016-08-18 13:12:26 +02:00
gtk.scm gnu: gtk: Add clipit. 2016-09-04 15:08:58 +08:00
guile-wm.scm
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guile.scm gnu: guile-daemon: Update to 0.1.1. 2016-08-18 11:02:39 +03:00
gv.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
gxmessage.scm
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haskell.scm gnu: Remove trailing periods from synopsis. 2016-07-29 17:37:22 +02:00
hexedit.scm gnu: Add hexedit. 2016-07-21 14:06:05 -04:00
hugs.scm
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hurd.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ibus.scm gnu: ibus: Fix simple engine. 2016-08-25 11:09:28 +02:00
icu4c.scm
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idutils.scm
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image.scm gnu: libtiff: Fix CVE-2016-5314. 2016-08-29 20:55:07 -04:00
imagemagick.scm gnu: imagemagick: Update to 6.9.5-8. 2016-08-29 19:11:07 -04:00
indent.scm
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inklingreader.scm
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inkscape.scm
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irc.scm gnu: Add sic. 2016-08-11 18:12:41 +03:00
iso-codes.scm
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java.scm gnu: icedtea-6: Update to 1.13.12 [security fixes]. 2016-08-31 19:04:46 -04:00
jemalloc.scm
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jrnl.scm
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julia.scm gnu: julia: Build with zlib. 2016-07-20 11:37:01 +03:00
kde-frameworks.scm gnu: Add kpmcore. 2016-08-30 22:38:33 +02:00
kde.scm gnu: snorenotify: Build with modular qt. 2016-07-07 12:23:39 +03:00
key-mon.scm
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kodi.scm
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language.scm
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ld-wrapper.in Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ldc.scm
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lego.scm
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less.scm
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lesstif.scm
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libbsd.scm
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libcanberra.scm
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libdaemon.scm
…
libedit.scm
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libevent.scm
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libffcall.scm
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libffi.scm
…
libftdi.scm
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libidn.scm gnu: libidn: Replace with 1.33 [fixes CVE-2015-8948 and CVE-2016-{6261,6263}]. 2016-09-02 09:52:56 -04:00
libphidget.scm
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libreoffice.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
libsigsegv.scm
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libunistring.scm
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libunwind.scm
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libupnp.scm
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libusb.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
links.scm
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linux-libre-4.1-i686.conf
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linux-libre-4.1-x86_64.conf
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linux-libre-4.4-i686.conf
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linux-libre-4.4-x86_64.conf
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linux-libre-4.7-i686.conf gnu: linux-libre: Update to 4.7. 2016-07-26 00:46:40 -04:00
linux-libre-4.7-x86_64.conf gnu: linux-libre: Update to 4.7. 2016-07-26 00:46:40 -04:00
linux.scm gnu: libnfsidmap: Set pluginpath at configure time. 2016-09-03 15:52:21 +02:00
lirc.scm gnu: python-lirc: Fix file-name. 2016-08-19 17:45:05 -04:00
lisp.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
llvm.scm gnu: llvm: Build without debugging symbols. 2016-07-18 20:28:21 -05:00
logging.scm
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lout.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
lsof.scm
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lua.scm gnu: Add lua5.1-sec. 2016-08-28 12:41:27 +02:00
lxde.scm gnu: Update URLs for sourceforge.net. 2016-07-22 11:47:12 -04:00
lxqt.scm
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lynx.scm
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m4.scm
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machine-learning.scm gnu: Add dlib. 2016-08-18 16:22:43 -04:00
mail.scm gnu: offlineimap: Update to 7.0.6. 2016-08-25 09:30:37 +03:00
make-bootstrap.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
man.scm gnu: help2man: Update to 1.47.4. 2016-07-10 21:34:37 +03:00
markdown.scm gnu: hoedown: Update to 3.0.7. 2016-07-17 16:20:47 +03:00
marst.scm gnu: Sync GNU descriptions with upstream. 2016-07-29 10:13:12 +02:00
mate.scm
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maths.scm Revert "gnu: gsl: Update to 2.2." 2016-09-01 20:17:01 -04:00
mc.scm
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mcrypt.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
messaging.scm gnu: Add prosody. 2016-08-28 12:41:27 +02:00
mg.scm
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mit-krb5.scm gnu: mit-krb5: Replace with 1.14.3 [fixes CVE-2016-3120]. 2016-08-23 06:40:00 -04:00
moe.scm
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mono.scm gnu: Add mono. 2016-08-08 14:27:13 -04:00
moreutils.scm gnu: moreutils: Add download location. 2016-08-19 10:42:29 +03:00
mp3.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
mpd.scm gnu: ncmpc: Update to 0.25. 2016-08-24 18:27:44 -04:00
mpi.scm gnu: openmpi: Make binaries reproducible. 2016-07-20 21:16:24 -05:00
mtools.scm
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multiprecision.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
music.scm gnu: synthv1: Build with gnu++11. 2016-08-22 01:49:52 +02:00
musl.scm gnu: Add Musl. 2016-08-13 11:31:39 +02:00
nano.scm
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ncdu.scm
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ncurses.scm
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netpbm.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
nettle.scm
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networking.scm gnu: Fix typo in copyright notice in (gnu packages networking). 2016-09-01 04:27:08 -04:00
ninja.scm
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node.scm
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noweb.scm
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ntp.scm
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nutrition.scm
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nvi.scm
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ocaml.scm gnu: opam: Upgrade to 1.2.2. 2016-08-22 23:59:54 -05:00
ocr.scm gnu: tesseract-ocr: Update to 3.04.01. 2016-07-21 17:18:42 +03:00
onc-rpc.scm gnu: rpcbind: Enable warm starts 2016-09-03 18:07:04 +02:00
openbox.scm gnu: openbox: Update source location. 2016-08-10 12:11:55 +03:00
openldap.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
openstack.scm gnu: python-requests-mock: Update to 1.0.0. 2016-09-02 06:44:25 +03:00
orpheus.scm
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ots.scm
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owncloud.scm
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package-management.scm gnu: diffoscope: Update to 56. 2016-08-12 01:55:47 -04:00
parallel.scm gnu: parallel: Use full paths for executables. 2016-08-08 22:07:49 +10:00
password-utils.scm gnu: cracklib: Fix CVE-2016-6318. 2016-08-17 00:40:39 -04:00
patchutils.scm
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pciutils.scm
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pcre.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
pdf.scm gnu: mupdf: Fix CVE-2016-{6265,6525}. 2016-08-27 17:35:21 -04:00
pem.scm
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perl.scm gnu: Add perl-encode-detect. 2016-08-08 22:36:38 -04:00
photo.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
pkg-config.scm
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plotutils.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
polkit.scm gnu: polkit-qt: Use modular qt. 2016-08-18 13:11:03 +02:00
popt.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
pretty-print.scm
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protobuf.scm gnu: python-protobuf: Update to 3.0.0. 2016-07-29 19:04:31 -04:00
pth.scm
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pulseaudio.scm gnu: pulseaudio: Update to 9.0. 2016-08-17 23:24:25 +02:00
pumpio.scm
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pv.scm
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python.scm gnu: Add python-odfpy. 2016-09-04 10:29:39 +03:00
qemu.scm gnu: qemu: Update to 2.6.1. 2016-08-21 07:38:22 +03:00
qt.scm gnu: Add prefix to license imports in (gnu packages qt). 2016-08-30 22:38:28 +02:00
ragel.scm
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rails.scm gnu: ruby-spring: Update to 1.7.2. 2016-08-10 15:36:33 +10:00
ratpoison.scm
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rdesktop.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
rdf.scm gnu: sord: Update to 0.14.0. 2016-08-14 16:03:42 +02:00
readline.scm gnu: Add rlwrap. 2016-07-17 08:56:03 +03:00
regex.scm gnu: Add re2. 2016-08-18 16:37:23 -04:00
rrdtool.scm
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rsync.scm
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ruby.scm gnu: ruby-concurrent: Adjust for 'replace-git-ls-files'. 2016-08-30 10:31:48 +10:00
rush.scm
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samba.scm gnu: iniparser: Use 'modify-phases'. 2016-07-24 15:43:34 +03:00
sawfish.scm
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scanner.scm
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scheme.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
screen.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
scribus.scm gnu: scribus: Build with gnu++11. 2016-08-22 01:49:52 +02:00
scsi.scm gnu: Add sg3-utils. 2016-08-14 12:45:44 -04:00
sdl.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
search.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
serialization.scm gnu: Add capnproto. 2016-08-23 11:58:35 -04:00
serveez.scm
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shells.scm gnu: zsh: Use 'modify-phases'. 2016-08-17 13:23:04 +02:00
shellutils.scm gnu: Add trash-cli. 2016-07-23 20:34:31 -04:00
shishi.scm
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skarnet.scm gnu: Add s6-linux-utils. 2016-08-01 01:11:57 +02:00
skribilo.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
slang.scm
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smalltalk.scm gnu: squeak-vm: Make builds bit-reproducible. 2016-08-30 12:00:52 +02:00
speech.scm
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spice.scm gnu: spice: Update to 0.12.8 [fixes CVE-2016-{0749,2150}]. 2016-08-22 13:08:38 +02:00
ssh.scm gnu: openssh: Set the default sshd user PATH to something sensible. 2016-08-22 00:20:48 +02:00
stalonetray.scm gnu: stalonetray: Update to 0.8.3. 2016-07-17 16:14:46 +03:00
statistics.scm gnu: python-statsmodels: Fix tests. 2016-08-04 13:40:13 +02:00
suckless.scm gnu: Add sent. 2016-08-16 01:05:14 -05:00
swig.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
sxiv.scm
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synergy.scm gnu: synergy: Upgrade to 1.8.2. 2016-08-23 00:01:08 -05:00
task-management.scm
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tbb.scm
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tcl.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
telephony.scm gnu: Add Seren. 2016-08-02 22:12:45 +03:00
terminals.scm gnu: kmscon: Add missing licenses. 2016-08-28 14:48:29 +02:00
tex.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
texinfo.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
textutils.scm gnu: Update URLs for sourceforge.net. 2016-07-22 11:47:12 -04:00
time.scm
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tls.scm gnu: Add perl-crypt-openssl-random. 2016-08-08 22:36:39 -04:00
tmux.scm gnu: Add Tmux Themepack. 2016-07-10 15:18:17 -04:00
tor.scm gnu: tor: Update to 0.2.8.7. 2016-08-24 16:03:42 -04:00
tre.scm
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tv.scm
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u-boot.scm gnu: dtc: Add missing symbols patch from debian. 2016-09-02 00:16:34 +02:00
unrtf.scm
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upnp.scm
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uucp.scm
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valgrind.scm
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version-control.scm gnu: git: Update to 2.10.0. 2016-09-03 16:24:18 +02:00
video.scm gnu: mpv: Update to 0.20.0. 2016-09-03 22:50:59 +03:00
vim.scm Rename references to (gnu packages tcsh). 2016-08-03 16:22:31 +02:00
vpn.scm
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vtk.scm
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w3m.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
wdiff.scm
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web.scm gnu: perl-net-smtp-ssl: Use CPAN mirror. 2016-08-19 23:22:51 +03:00
webkit.scm gnu: webkitgtk: Update to 2.12.4 [fixes CVE-2016-{4590,4591,4622,4624}]. 2016-08-25 01:09:09 -04:00
wget.scm
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wicd.scm
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wine.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
wm.scm gnu: awesome: Shorten the description. 2016-09-04 10:29:39 +03:00
wordnet.scm gnu: Remove trademark acknowledgements. 2016-08-22 21:51:50 +02:00
wv.scm
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wxwidgets.scm gnu: wxwidgets: Update source URL. 2016-07-24 10:36:54 +02:00
xdisorg.scm gnu: rofi: Update to 1.2.0. 2016-08-31 15:12:29 -04:00
xfce.scm
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xfig.scm
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xiph.scm gnu: opus: Update to 1.1.3. 2016-07-22 14:02:13 -04:00
xml.scm gnu: Remove superfluous whitespace from (gnu packages xml). 2016-08-21 16:16:31 -04:00
xnee.scm
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xorg.scm gnu: xf86-input-synaptics: Update to 1.8.99.1. 2016-08-28 20:31:30 +03:00
yubico.scm
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zile.scm
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zip.scm
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