guix-devel/guix
Ricardo Wurmus 5063deab08
import: cran: Support experiment and annotation packages.
* guix/import/cran.scm (%bioconductor-packages-list-url): Replace variable...
(bioconductor-packages-list-url): ...with this procedure.
(bioconductor-packages-list): Accept optional TYPE argument.
(latest-bioconductor-package-version): Same.
(fetch-description): Determine package type and use it in calls to
LATEST-BIOCONDUCTOR-PACKAGE-VERSION and BIOCONDUCTOR-URI.
(description->package): Pass package type to URI helper procedure; include
package type in annotation or experiment packages from Bioconducter.
2019-08-16 15:07:22 +02:00
..
build Merge branch 'master' into staging 2019-08-08 00:35:37 +02:00
build-system build-system/r: bioconductor-uri: Take optional package type. 2019-08-16 15:07:22 +02:00
import import: cran: Support experiment and annotation packages. 2019-08-16 15:07:22 +02:00
scripts machine: Implement 'roll-back-machine'. 2019-08-15 07:43:09 -04:00
store gnu, guix: Yearly ritual purging of the filesystems. 2019-04-25 04:42:16 +02:00
tests
base16.scm
base32.scm
base64.scm
build-system.scm
bzr-download.scm Add (guix bzr-download). 2019-05-09 00:22:37 -04:00
cache.scm
channels.scm channels: Always provide a <channel-metadata> record. 2019-07-19 11:53:47 +02:00
ci.scm ci: Add procedures to access evaluations. 2018-11-10 23:33:46 +01:00
colors.scm colors: Add 'highlight'. 2019-04-14 23:40:52 +02:00
combinators.scm
config.scm.in Add (guix lzlib). 2019-05-06 23:21:33 +02:00
cpio.scm
cve.scm
cvs-download.scm
deprecation.scm deprecation: Use the 'warning' procedure for diagnostics. 2019-06-03 23:18:47 +02:00
derivations.scm gexp: 'lowered-gexp-guile' now returns a <derivation-input>. 2019-07-15 10:01:05 +02:00
describe.scm describe: Add 'current-profile-date'. 2019-03-17 22:55:01 +01:00
diagnostics.scm Add (guix diagnostics). 2019-06-03 23:18:47 +02:00
discovery.scm discovery: 'scheme-files' ignores hidden files. 2019-07-26 21:49:25 +02:00
docker.scm maint: Switch to Guile-JSON 3.x. 2019-07-25 00:16:41 +02:00
download.scm download: Use the new 'derivation' calling convention. 2019-07-15 10:01:05 +02:00
elf.scm
ftp-client.scm Remove most uses of the _IO*F constants. 2019-01-09 14:47:53 +01:00
gexp.scm gexp: 'program-file' honors the current system and cross-compilation target. 2019-07-26 23:50:12 +02:00
git-download.scm maint: Switch to Guile-JSON 3.x. 2019-07-25 00:16:41 +02:00
git.scm git: 'switch-to-ref' resolves tag targets. 2019-07-26 11:21:36 +02:00
glob.scm
gnu-maintenance.scm gnu-maintenance: Switch to ftp.mirrorservice.org for KDE updater. 2019-06-10 13:58:24 +02:00
gnupg.scm
grafts.scm grafts: 'references-oracle' now takes a derivation input. 2019-07-02 18:33:51 +02:00
graph.scm
hg-download.scm
http-client.scm Remove most uses of the _IO*F constants. 2019-01-09 14:47:53 +01:00
i18n.scm
inferior.scm inferior: Add 'read-repl-response'. 2019-07-04 18:05:02 +02:00
licenses.scm licenses: Add Historical Permission Notice and Disclaimer license 2019-06-20 18:24:49 +02:00
lint.scm lint: source: Stop as soon as a valid URL is found. 2019-07-20 01:32:18 +02:00
lzlib.scm lzlib: 'make-lzip-input-port' better handles end of decompression. 2019-06-01 15:26:30 +02:00
man-db.scm
memoization.scm
modules.scm Remove traces of "GuixSD". 2019-03-13 23:12:43 +01:00
monad-repl.scm
monads.scm monads, gexp: Prevent redefinition of syntax parameters. 2019-02-06 23:06:18 +01:00
nar.scm nar: Really lock store files. 2019-06-05 23:10:37 +02:00
packages.scm gexp: 'compiled-modules' loads modules before compiling them. 2019-04-04 17:47:02 +02:00
pki.scm
profiles.scm profiles: Adjust packages->manifest pattern for inferior packages. 2019-07-03 12:03:07 +02:00
profiling.scm profiling: Add a "gc" profiling component. 2019-01-15 20:24:08 +01:00
progress.scm progress: Call 'time-difference' on times of the same type. 2019-06-24 23:10:13 +02:00
records.scm records: Support custom 'this' identifiers. 2019-03-30 11:08:39 +01:00
remote.scm remote: Resolve missing 'G_'. 2019-08-16 08:45:44 -04:00
repl.scm Add (guix repl). 2019-07-04 18:05:02 +02:00
scripts.scm scripts: GC hint suggests 'guix gc -d 1m'. 2019-04-10 17:09:47 +02:00
search-paths.scm
self.scm maint: Switch to Guile-JSON 3.x. 2019-07-25 00:16:41 +02:00
serialization.scm store: Rename '&nix-error' to '&store-error'. 2019-01-21 23:09:55 +01:00
sets.scm
ssh.scm machine: Use 'become-command'. 2019-08-16 08:47:28 -04:00
status.scm colors: Introduce a disjoint type and pre-compute ANSI escapes. 2019-04-11 18:18:13 +02:00
store.scm store: 'run-with-store' gracefully deals with #f store. 2019-07-05 00:51:17 +02:00
svn-download.scm guix: Add svn-multi-reference. 2019-07-23 21:43:24 +02:00
swh.scm maint: Switch to Guile-JSON 3.x. 2019-07-25 00:16:41 +02:00
tests.scm lzlib: Add 'make-lzip-input-port/compressed'. 2019-05-27 22:47:24 +02:00
ui.scm ui: 'warn-about-load-error' provides hints for unbound variables. 2019-07-20 01:32:17 +02:00
upstream.scm refresh: Update the source code URL. 2019-03-27 14:59:42 +01:00
utils.scm utils: canonical-newline-port: Fix handling of carriage return at buffer end. 2019-06-20 14:07:01 +02:00
workers.scm
zlib.scm