Weave.jl/README.md

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# Weave
[![Build Status](https://travis-ci.org/mpastell/Weave.jl.svg?branch=master)](https://travis-ci.org/mpastell/Weave.jl)
[![Build status](https://ci.appveyor.com/api/projects/status/r97pwi9x8ard6xk6/branch/master?svg=true)](https://ci.appveyor.com/project/mpastell/weave-jl/branch/master)
[![Coverage Status](https://img.shields.io/coveralls/mpastell/Weave.jl.svg)](https://coveralls.io/r/mpastell/Weave.jl?branch=master)
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[![](https://img.shields.io/badge/docs-stable-blue.svg)](https://mpastell.github.io/Weave.jl/stable)
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[![](http://joss.theoj.org/papers/10.21105/joss.00204/status.svg)](http://dx.doi.org/10.21105/joss.00204)
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Weave is a scientific report generator/literate programming tool
for Julia. It resembles [Pweave](http://mpastell.com/pweave), Knitr, rmarkdown
and Sweave.
You can write your documentation and code in input document using Noweb,
Markdown, Script syntax and use `weave` function to execute to document to capture results
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and figures.
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**Current features**
* Noweb, markdown or script syntax for input documents.
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* Execute code as terminal or "script" chunks.
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* Capture Plots.jl figures *(or Gadfly and PyPlot on julia 0.6)*.
* Supports LaTex, Pandoc, Github markdown, MultiMarkdown, Asciidoc and reStructuredText output
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* Publish markdown directly to html and pdf using Julia or Pandoc markdown.
* Simple caching of results
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* Convert to and from IJulia notebooks
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**Citing Weave:** *Pastell, Matti. 2017. Weave.jl: Scientific Reports Using Julia. The Journal of Open Source Software. http://dx.doi.org/10.21105/joss.00204*
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![Weave code and output](http://mpastell.com/images/weave_demo.png)
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## Installation
You can install the latest release using Julia package manager:
```julia
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using Pkg
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Pkg.add("Weave")
```
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## Usage
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Run from julia using Plots.jl for plots:
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```julia
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#First add depencies for the example
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using Pkg; Pkg.add.(["Plots", "DSP"])
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#Use Weave
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using Weave
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weave(joinpath(dirname(pathof(Weave)), "../examples", "FIR_design.jmd"), out_path=:pwd)
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```
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If you have LaTeX installed you can also weave directly to pdf.
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```julia
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weave(joinpath(dirname(pathof(Weave)), "../examples", "FIR_design.jmd"),
out_path=:pwd, doctype="md2pdf")
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```
## Documentation
Documenter.jl with MKDocs generated documentation:
[![](https://img.shields.io/badge/docs-stable-blue.svg)](https://mpastell.github.io/Weave.jl/stable)
[![](https://img.shields.io/badge/docs-latest-blue.svg)](https://mpastell.github.io/Weave.jl/latest)
## Editor support
I have made [language-weave](https://atom.io/packages/language-weave) package
for Atom to do the syntax highlighting correctly.
## Contributing
I will probably add new features to Weave when I need them myself or if they are requested and not too difficult to implement. You can contribute by opening issues on Github or implementing things yourself and making a pull request. I'd also appreciate example documents written using Weave to add to examples.
## Contributors
You can see the list of contributors on Github: https://github.com/mpastell/Weave.jl/graphs/contributors. Thanks for the important additions, fixes and comments.