gnu: Add r-absfiltergsea.
* gnu/packages/bioinformatics.scm (r-absfiltergsea): New variable.
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@ -13938,3 +13938,30 @@ generated by nanopore sequencing devices for the purposes of quality control and
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downstream analysis. Poretools operates directly on the native FAST5, a variant
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of the Hierarchical Data Format (HDF5) standard.")
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(license license:expat))))
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(define-public r-absfiltergsea
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(package
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(name "r-absfiltergsea")
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(version "1.5.1")
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(source
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(origin
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(method url-fetch)
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(uri (cran-uri "AbsFilterGSEA" version))
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(sha256
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(base32 "15srxkxsvn38kd5frdrwfdf0ad8gskrd0h01wmdf9hglq8fjrp7w"))))
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(properties `((upstream-name . "AbsFilterGSEA")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-deseq" ,r-deseq)
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("r-limma" ,r-limma)
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("r-rcpp" ,r-rcpp)
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("r-rcpparmadillo" ,r-rcpparmadillo)))
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(home-page "https://cran.r-project.org/web/packages/AbsFilterGSEA/")
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(synopsis "Improved false positive control of gene-permuting with absolute filtering")
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(description
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"This package provides a function that performs gene-permuting of a gene-set
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enrichment analysis (GSEA) calculation with or without the absolute filtering.
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Without filtering, users can perform (original) two-tailed or one-tailed
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absolute GSEA.")
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(license license:gpl2)))
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