gnu: Add r-dropbead.
* gnu/packages/bioinformatics.scm (r-dropbead): New variable.
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@ -10658,6 +10658,35 @@ are optimized per data type and for subsetted calculations such that both
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memory usage and processing time is minimized.")
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(license license:expat)))
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(define-public r-dropbead
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(let ((commit "cf0be5ae5302684bd03e78ab65b142900bbbb840")
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(revision "1"))
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(package
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(name "r-dropbead")
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(version (string-append "0-" revision "." (string-take commit 7)))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/rajewsky-lab/dropbead.git")
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(commit commit)))
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(sha256
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(base32
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"1b2lphsc236s1rdzlijxg8yl1jnqpwcvj4x938r89rqpj93jb780"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-ggplot2" ,r-ggplot2)
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("r-rcolorbrewer" ,r-rcolorbrewer)
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("r-gridextra" ,r-gridextra)
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("r-gplots" ,r-gplots)
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("r-plyr" ,r-plyr)))
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(home-page "https://github.com/rajewsky-lab/dropbead")
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(synopsis "Basic exploration and analysis of Drop-seq data")
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(description "This package offers a quick and straight-forward way to
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explore and perform basic analysis of single cell sequencing data coming from
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droplet sequencing. It has been particularly tailored for Drop-seq.")
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(license license:gpl3))))
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(define htslib-for-sambamba
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(let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5"))
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(package
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