gnu: Add r-affycontam.

* gnu/packages/bioconductor.scm (r-affycontam): New variable.
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Ricardo Wurmus 2019-09-15 20:53:27 +02:00
parent 5094aa9472
commit 4ca2d6c1a6
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@ -1030,6 +1030,31 @@ provides access to @dfn{GeneChip Operating System} (GCOS) and @dfn{GeneChip
Command Console} (AGCC)-compatible sample annotation files.") Command Console} (AGCC)-compatible sample annotation files.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-affycontam
(package
(name "r-affycontam")
(version "1.42.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "affyContam" version))
(sha256
(base32
"0nzk1cm26rhmym753wyhn35hqnz5lvavi3i5qfgdvhxgjy3m1jgp"))))
(properties `((upstream-name . "affyContam")))
(build-system r-build-system)
(propagated-inputs
`(("r-affy" ,r-affy)
("r-affydata" ,r-affydata)
("r-biobase" ,r-biobase)))
(home-page "https://bioconductor.org/packages/affyContam/")
(synopsis "Structured corruption of Affymetrix CEL file data")
(description
"Microarray quality assessment is a major concern of microarray analysts.
This package provides some simple approaches to in silico creation of quality
problems in CEL-level data to help evaluate performance of quality metrics.")
(license license:artistic2.0)))
(define-public r-annotate (define-public r-annotate
(package (package
(name "r-annotate") (name "r-annotate")