gnu: Add r-affycontam.
* gnu/packages/bioconductor.scm (r-affycontam): New variable.
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@ -1030,6 +1030,31 @@ provides access to @dfn{GeneChip Operating System} (GCOS) and @dfn{GeneChip
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Command Console} (AGCC)-compatible sample annotation files.")
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(license license:artistic2.0)))
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(define-public r-affycontam
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(package
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(name "r-affycontam")
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(version "1.42.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "affyContam" version))
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(sha256
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(base32
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"0nzk1cm26rhmym753wyhn35hqnz5lvavi3i5qfgdvhxgjy3m1jgp"))))
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(properties `((upstream-name . "affyContam")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-affy" ,r-affy)
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("r-affydata" ,r-affydata)
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("r-biobase" ,r-biobase)))
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(home-page "https://bioconductor.org/packages/affyContam/")
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(synopsis "Structured corruption of Affymetrix CEL file data")
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(description
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"Microarray quality assessment is a major concern of microarray analysts.
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This package provides some simple approaches to in silico creation of quality
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problems in CEL-level data to help evaluate performance of quality metrics.")
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(license license:artistic2.0)))
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(define-public r-annotate
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(package
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(name "r-annotate")
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