gnu: Add r-gosemsim.

* gnu/packages/bioconductor.scm (r-gosemsim): New variable.
master
Ricardo Wurmus 2019-03-25 16:19:52 +01:00
parent 3e41919d51
commit c04f230eb3
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1 changed files with 27 additions and 0 deletions

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@ -2644,3 +2644,30 @@ of the matrix are sorted according to a hierarchical clustering, and the
corresponding dendrogram is plotted. Optionally, panels with additional corresponding dendrogram is plotted. Optionally, panels with additional
information about samples and features can be added to the plot.") information about samples and features can be added to the plot.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public r-gosemsim
(package
(name "r-gosemsim")
(version "2.8.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "GOSemSim" version))
(sha256
(base32
"0ckihpy8jmgn2np1avprz76v9z7i5hqm2gj514c6dmmq3csbc7ib"))))
(properties `((upstream-name . "GOSemSim")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-go-db" ,r-go-db)
("r-rcpp" ,r-rcpp)))
(home-page "https://guangchuangyu.github.io/software/GOSemSim")
(synopsis "GO-terms semantic similarity measures")
(description
"The semantic comparisons of @dfn{Gene Ontology} (GO) annotations provide
quantitative ways to compute similarities between genes and gene groups, and
have became important basis for many bioinformatics analysis approaches.
GOSemSim is an R package for semantic similarity computation among GO terms,
sets of GO terms, gene products and gene clusters.")
(license license:artistic2.0)))