gnu: Add r-seqbias.
* gnu/packages/bioconductor.scm (r-seqbias): New variable.
This commit is contained in:
parent
12105c6c3a
commit
e5dfcd8e26
|
@ -5701,6 +5701,34 @@ with multiple R processes supported by the package @code{parallel}.")
|
||||||
@code{gdsfmt} package.")
|
@code{gdsfmt} package.")
|
||||||
(license license:gpl3)))
|
(license license:gpl3)))
|
||||||
|
|
||||||
|
(define-public r-seqbias
|
||||||
|
(package
|
||||||
|
(name "r-seqbias")
|
||||||
|
(version "1.32.0")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "seqbias" version))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"1pk97jsq0rxijsdm5wnmlw79mhy19skdq1h3mmfbdjh560md47lw"))))
|
||||||
|
(properties `((upstream-name . "seqbias")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs
|
||||||
|
`(("r-biostrings" ,r-biostrings)
|
||||||
|
("r-genomicranges" ,r-genomicranges)
|
||||||
|
("r-rhtslib" ,r-rhtslib)))
|
||||||
|
(inputs
|
||||||
|
`(("zlib" ,zlib))) ; This comes from rhtslib.
|
||||||
|
(home-page "https://bioconductor.org/packages/seqbias/")
|
||||||
|
(synopsis "Estimation of per-position bias in high-throughput sequencing data")
|
||||||
|
(description
|
||||||
|
"This package implements a model of per-position sequencing bias in
|
||||||
|
high-throughput sequencing data using a simple Bayesian network, the structure
|
||||||
|
and parameters of which are trained on a set of aligned reads and a reference
|
||||||
|
genome sequence.")
|
||||||
|
(license license:lgpl3)))
|
||||||
|
|
||||||
(define-public r-wavcluster
|
(define-public r-wavcluster
|
||||||
(package
|
(package
|
||||||
(name "r-wavcluster")
|
(name "r-wavcluster")
|
||||||
|
|
Loading…
Reference in New Issue