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Author SHA1 Message Date
Ludovic Courtès 066ccc2c69
gnu: gcc: Fix cross-compilation. 
Previously "guix build gcc@5 --target=TRIPLET" would fail like this:

   checking for exported symbols... /tmp/guix-build-gcc-5.5.0.drv-0/gcc-5.5.0/libcc1/configure: line 14531: -T: command not found
   yes
   checking for -rdynamic... /tmp/guix-build-gcc-5.5.0.drv-0/gcc-5.5.0/libcc1/configure: line 14541: -T: command not found
   no
   checking for library containing dlopen... -ldl
   checking for -fPIC -shared... yes
   configure: error:
      Building GCC with plugin support requires a host that supports
      -fPIC, -shared, -ldl and -rdynamic.

* gnu/packages/gcc.scm (gcc-4.7)[maybe-target-tools]: Add "OBJDUMP".
(gcc-5)[source](snippet, modules): New fields.
 2017-12-20 22:21:16 +01:00
Ludovic Courtès 614fffe427
build-system/gnu: Add the "static" output of libc in cross environments. 
Fixes a regression whereby the host libc.a would be missing when
cross-compiling.

This is a followup to commit 6dff905e51.

* guix/build-system/gnu.scm (standard-cross-packages): Add the
"cross-libc:static".
 2017-12-20 14:56:47 +01:00
Marius Bakke 1b0f65dc99
gnu: icu4c: Update to 60.2. 
* gnu/packages/icu4c.scm (icu4c): Update to 60.2.
 2017-12-19 23:34:10 +01:00
Marius Bakke b8e607bcf4
gnu: gtk+: Update to 3.22.26. 
* gnu/packages/gtk.scm (gtk+): Update to 3.22.26.
 2017-12-19 23:34:10 +01:00
Marius Bakke 31d170f381
gnu: harfbuzz: Update to 1.7.3. 
* gnu/packages/gtk.scm (harfbuzz): Update to 1.7.3.
 2017-12-19 23:34:09 +01:00
Efraim Flashner 677bc34d5b
gnu: Remove redundant cmake libdir configure flags. 
* gnu/packages/bioinformatics.scm (imp)[arguments]: Remove
CMAKE_INSTALL_LIBDIR flag.
* gnu/packages/calendar.scm (libical): Same.
* gnu/packages/engineering.scm (kicad): Same.
* gnu/packages/games.scm (openrct2, mgba): Same.
* gnu/packages/gl.scm (virtualgl): Same.
* gnu/packages/image-processing.scm (mia): Same.
* gnu/packages/linux.scm (rdma-core): Same.
* gnu/packages/machine-learning.scm (dlib): Same.
* gnu/packages/maths.scm (lapack, superlu, z3): Same.
* gnu/packages/password-utils.scm (keepassxc): Same.
* gnu/packages/photo.scm (darktable): Same.
* gnu/packages/rdesktop.scm (freerdp): Same.
 2017-12-19 19:52:01 +02:00
Efraim Flashner 5857a0658a
guix: cmake-build-system: Install libraries to /lib. 
* guix/build/cmake-build-system.scm (configure): Add flag to always
install libraries in /lib.
 2017-12-19 19:52:00 +02:00
Marius Bakke 02f21a874e
gnu: ruby: Remove graft for 2.4.3. 
* gnu/packages/ruby.scm (ruby): Update to 2.4.3.
(ruby-2.4.3): Remove variable.
 2017-12-19 01:50:19 +01:00
Marius Bakke 4a158286a6
gnu: openssl: Remove graft for 1.0.2n. 
* gnu/packages/tls.scm (openssl): Update to 1.0.2n.
(openssl-1.0.2n): Remove variable.
 2017-12-19 01:44:30 +01:00
Marius Bakke 32cd878be0
Merge branch 'master' into core-updates 2017-12-19 01:42:40 +01:00
Marius Bakke 98bd11cfe7
gnu: termite: Update to 13. 
* gnu/packages/terminals.scm (termite): Update to 13.
 2017-12-19 01:37:22 +01:00
Marius Bakke 972fa87039
gnu: pcsc-lite: Update to 1.8.23. 
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.23.
[arguments]<#:configure-flags>: Add "--disable-libsystemd".
[license]: Adjust to removed sd-daemon files.
 2017-12-19 01:30:14 +01:00
Marius Bakke 937790df9d
gnu: qemu: Update to 2.10.2. 
* gnu/packages/patches/qemu-CVE-2017-15118.patch,
gnu/packages/patches/qemu-CVE-2017-15119.patch,
gnu/packages/patches/qemu-CVE-2017-15268.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/virtualization.scm (qemu): Update to 2.10.2.
[source](patches): Remove obsolete.
 2017-12-19 01:15:09 +01:00
Marius Bakke 7534256102
gnu: libdrm: Update to 2.4.89. 
* gnu/packages/xdisorg.scm (libdrm): Update to 2.4.89.
 2017-12-19 00:41:07 +01:00
Marius Bakke 2ea3333504
gnu: libjpeg-turbo: Update to 1.5.3. 
* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.3.
 2017-12-18 23:25:20 +01:00
Marius Bakke 7bd9af7376
gnu: libsodium: Update to 1.0.16. 
* gnu/packages/crypto.scm (libsodium): Update to 1.0.16.
 2017-12-18 23:25:20 +01:00
Marius Bakke 8e9b3c6647
gnu: expect: Update to 5.45.3. 
* gnu/packages/tcl.scm (expect): Update to 5.45.3.
 2017-12-18 23:25:20 +01:00
Kei Kebreau 63dc763816
gnu: deutex: Update to 5.1.0. 
* gnu/packages/games.scm (deutex): Update to 5.1.0.
 2017-12-18 17:19:58 -05:00
Ludovic Courtès 45f6211730
doc: Clarify treatment of the root account. 
* doc/guix.texi (operating-system Reference): Clarify the situation of
UID 0.
 2017-12-18 23:17:30 +01:00
Ludovic Courtès 3caab236c4
guix gc: '--verify=foo' is reported as an error. 
Fixes <https://bugs.gnu.org/29761>.
Reported by Martin Castillo <castilma@uni-bremen.de>.

* guix/scripts/gc.scm (argument->verify-options): New procedure.
(%options) ["verify"]: Adjust to use it.
* tests/guix-gc.sh: Add test.
 2017-12-18 23:17:30 +01:00
Kei Kebreau 147d42fc03
gnu: emacspeak: Update to 47.0. 
* gnu/packages/emacs.scm (emacspeak): Update to 47.0.
[source]: Remove snippet.
[arguments]: Set SHELL environment variable.
 2017-12-18 16:50:45 -05:00
Efraim Flashner 91675d5082
gnu: rsync: Patch CVE-2017-{16548,17433,17434}. 
* gnu/packages/rsync.scm (rsync)[source]: Add patches.
[properties]: Mark CVE-2017-15994 as not relevant.
* gnu/packages/patches/rsync-CVE-2017-16548.patch,
gnu/packages/patches/rsync-CVE-2017-17433.patch,
gnu/packages/patches/rsync-CVE-2017-17433-fix-tests.patch,
gnu/packages/patches/rsync-CVE-2017-17434-pt1.patch,
gnu/packages/patches/rsync-CVE-2017-17434-pt2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-12-18 22:53:46 +02:00
Ludovic Courtès b50a9cc008
gnu: psm: Update home page URL. 
* gnu/packages/linux.scm (psm)[home-page]: Update.
[source](uri): Use it.
 2017-12-18 17:52:58 +01:00
Ludovic Courtès ab25eb7caa
gexp: 'computed-file' has a new #:guile parameter. 
* guix/gexp.scm (<computed-file>)[guile]: New field.
(computed-file): Add #:guile.
(computed-file-compiler): Honor 'guile'.
 2017-12-18 17:52:58 +01:00
Ludovic Courtès 4e9dfe399b
gnu: Fix ambiguous 'zip' reference. 
* gnu/packages/photo.scm: Hide 'zip' from (srfi srfi-1).
 2017-12-18 17:52:58 +01:00
Ludovic Courtès 399993f804
ui: Non-zero exit for compound '&message' and '&error-location' conditions. 
* guix/ui.scm (call-with-error-handling): When both 'message?' and
'error-location?' are true, add call to 'exit'.
 2017-12-18 17:52:58 +01:00
Mathieu Othacehe 9f1e39d1fc
system: examples: Add a template for BeagleBone Black. 
* gnu/system/examples/beaglebone-black.tmpl: New file.
* Makefile.am (EXAMPLES): Add it.
* gnu/system/install.scm (/etc/configuration-files): Add it.
 2017-12-18 15:28:14 +01:00
Tobias Geerinckx-Rice af8c547d33
gnu: claws-mail: Update to 3.16.0. 
* gnu/packages/mail.scm (claws-mail): Update to 3.16.0.
 2017-12-18 15:22:08 +01:00
Clément Lassieur b05e8ee120
services: nginx: Allow to add raw content to the server blocks. 
* doc/guix.texi (Web Services): Document 'raw-content'.
* gnu/services/web.scm (<nginx-server-configuration>)[raw-content]: New field.
(emit-nginx-server-config): Add it.
 2017-12-18 12:03:14 +01:00
Clément Lassieur 8b223ceac4
services: nginx: Replace 'http-port' and 'https-port' with 'listen'. 
* doc/guix.texi (Web Services, Version Control Services): Update accordingly.
* gnu/services/certbot.scm (certbot-nginx-server-configurations): Likewise.
* gnu/services/version-control.scm (%cgit-configuration-nginx): Likewise.
* gnu/services/web.scm (<nginx-server-configuration>,
emit-nginx-server-config): Likewise.
* gnu/tests/version-control.scm (%cgit-configuration-nginx,
%git-nginx-configuration): Likewise.
* gnu/tests/web.scm (%nginx-servers, %php-fpm-nginx-server-blocks): Likewise.
 2017-12-18 12:03:14 +01:00
Ricardo Wurmus f1a2b1cb20
gnu: r-seurat: Update to 2.1.0. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.1.0.
[propagated-inputs]: Add r-diffusionmap, r-dtw, r-ggjoy, r-hmisc, r-ica,
r-mass, r-matrix, r-nmf, r-plotly, r-sdmtools, r-tidyr; remove r-plyr,
r-rcppeigen, r-fastica.
 2017-12-18 12:01:35 +01:00
Ricardo Wurmus fff9b88439
gnu: Add r-diffusionmap. 
* gnu/packages/graph.scm (r-diffusionmap): New variable.
 2017-12-18 12:01:35 +01:00
Ricardo Wurmus 007f6d9885
gnu: Add r-ggjoy. 
* gnu/packages/cran.scm (r-ggjoy): New variable.
 2017-12-18 12:01:34 +01:00
Ricardo Wurmus f90018e568
gnu: Add r-ggridges. 
* gnu/packages/cran.scm (r-ggridges): New variable.
 2017-12-18 12:01:34 +01:00
Ricardo Wurmus ae3f207951
gnu: Add r-scatterplot3d. 
* gnu/packages/cran.scm (r-scatterplot3d): New variable.
 2017-12-18 12:01:34 +01:00
Ricardo Wurmus 15ef07f00e
gnu: Add r-sdmtools. 
* gnu/packages/cran.scm (r-sdmtools): New variable.
 2017-12-18 12:01:34 +01:00
Ricardo Wurmus bf025ff6f2
gnu: Add r-dtw. 
* gnu/packages/cran.scm (r-dtw): New variable.
 2017-12-18 12:01:34 +01:00
Ricardo Wurmus ae16426007
gnu: Add r-ica. 
* gnu/packages/cran.scm (r-ica): New variable.
 2017-12-18 12:01:34 +01:00
Ricardo Wurmus 8271b8d22a
gnu: r-seurat: Fix ModularityOptimizer.jar. 
* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class
attribute in manifest.
 2017-12-18 12:01:34 +01:00
Ricardo Wurmus b6313997ad
gnu: qmidiarp: Update to 0.6.5. 
* gnu/packages/music.scm (qmidiarp): Update to 0.6.5.
 2017-12-18 12:01:33 +01:00
Ricardo Wurmus cf31d5e114
gnu: Add noise-repellent. 
* gnu/packages/audio.scm (noise-repellent): New variable.
 2017-12-18 12:01:33 +01:00
Ricardo Wurmus 13edf1b9ea
gnu: Add aj-snapshot. 
* gnu/packages/music.scm (aj-snapshot): New variable.
 2017-12-18 12:01:33 +01:00
Ricardo Wurmus 39b335849b
gnu: Add jack-capture. 
* gnu/packages/music.scm (jack-capture): New variable.
 2017-12-18 12:01:33 +01:00
Ricardo Wurmus 4071379357
gnu: Add qjackrcd. 
* gnu/packages/audio.scm (qjackrcd): New variable.
 2017-12-18 12:01:33 +01:00
Ricardo Wurmus 92b36e3aa5
gnu: Add whysynth. 
* gnu/packages/music.scm (whysynth): New variable.
 2017-12-18 12:01:33 +01:00
Ricardo Wurmus f7ce213404
gnu: Add sonivox-eas. 
* gnu/packages/music.scm (sonivox-eas): New variable.
 2017-12-18 12:01:32 +01:00
Martin Castillo 5a5d1a7f47
doc: Fix typo. 
* doc/guix.texi: remove double occurence of generations.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-12-18 11:12:45 +01:00
Ludovic Courtès 4423302724
nls: Update 'hu' translation. 2017-12-18 11:12:41 +01:00
Ludovic Courtès 11b9a22366
gnu: ncurses: Fix cross-compilation. 
This fixes a regression introduced in
667082d591 whereby cross-compiling ncurses
would fail.

* gnu/packages/ncurses.scm (ncurses)[arguments]: In CONFIGURE-PHASE, get
"rollup-patch" from NATIVE-INPUTS when cross-compiling.
 2017-12-18 10:06:32 +01:00
Leo Famulari 2ca712bdba
vm: Pass the host's /dev/urandom to the guest at /dev/hwrng. 
* gnu/build/vm.scm (load-in-linux-vm): Use QEMU's virtio-rng-pci.
* gnu/system/vm.scm (common-qemu-options): Likewise.
 2017-12-18 00:39:40 -05:00