0bd5c7b859
gnu: r-genomicalignments: Update to 1.14.2.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.14.2.
2018-04-21 23:07:52 +02:00
4207770218
gnu: r-dexseq: Update to 1.24.4.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.4.
2018-04-21 23:07:52 +02:00
3db5d04ccc
gnu: r-vegan: Update to 2.5-1.
...
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.5-1.
[propagated-inputs]: Add r-knitr.
2018-04-21 23:07:52 +02:00
2ef5ab8749
gnu: r-mapproj: Update to 1.2.6.
...
* gnu/packages/geo.scm (r-mapproj): Update to 1.2.6.
2018-04-21 23:07:52 +02:00
5895f238d7
gnu: r-maps: Update to 3.3.0.
...
* gnu/packages/geo.scm (r-maps): Update to 3.3.0.
2018-04-21 23:07:52 +02:00
8cf7b28ffe
gnu: r-igraph: Update to 1.2.1.
...
* gnu/packages/graph.scm (r-igraph): Update to 1.2.1.
[inputs]: Add glpk and zlib.
[propagated-inputs]: Remove r-irlba.
2018-04-21 23:07:52 +02:00
2bcf5fd337
gnu: r-subplex: Update to 1.5-4.
...
* gnu/packages/maths.scm (r-subplex): Update to 1.5-4.
2018-04-21 23:07:52 +02:00
61c868e1f5
gnu: r-shinydashboard: Update to 0.7.0.
...
* gnu/packages/web.scm (r-shinydashboard): Update to 0.7.0.
2018-04-21 23:07:52 +02:00
4fe0efddfe
gnu: r-htmlwidgets: Update to 1.2.
...
* gnu/packages/web.scm (r-htmlwidgets): Update to 1.2.
2018-04-21 23:07:52 +02:00
75a40e89d9
gnu: r-lme4: Update to 1.1-17.
...
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-17.
2018-04-21 23:07:52 +02:00
30d76d442a
gnu: r-futile-options: Update to 1.0.1.
...
* gnu/packages/statistics.scm (r-futile-options): Update to 1.0.1.
2018-04-21 23:07:52 +02:00
4184649940
gnu: r-xml: Update to .
...
* gnu/packages/statistics.scm (r-xml): Update to .
2018-04-21 23:07:52 +02:00
ff91ed7d56
gnu: r-rsqlite: Update to 2.1.0.
...
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.0.
2018-04-21 23:07:52 +02:00
1aa2ad5b32
gnu: r-survival: Update to 2.42-3.
...
* gnu/packages/statistics.scm (r-survival): Update to 2.42-3.
2018-04-21 23:07:52 +02:00
6fa9cf1abb
gnu: r-nlme: Update to 3.1-137.
...
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-137.
2018-04-21 23:07:52 +02:00
ac6672d539
gnu: r-cluster: Update to 2.0.7-1.
...
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.7-1.
2018-04-21 23:07:52 +02:00
c43ea99b39
gnu: r-minimal: Update to 3.4.4.
...
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.4.
2018-04-21 23:07:52 +02:00
785f40dfbc
gnu: spindle: Limit supported systems.
...
* gnu/packages/admin.scm (spindle)[supported-system]: New field.
2018-04-21 23:25:42 +03:00
c80629e7c2
gnu: freefall: Fix compilation error.
...
* gnu/packages/linux.scm (freefall)[arguments]: Add make-flag to set
CC=gcc.
2018-04-21 23:04:25 +03:00
841f833171
gnu: python-onetimepass: Make python-six a propagated input.
...
* gnu/packages/python.scm (python-onetimepass)[inputs]: Move python-six from
here...
[propagated-inputs]: ...to here.
2018-04-21 17:37:12 +02:00
0ccb104354
gnu: go-github-com-vitrun-qart-qr: Remove duplicate 'description' field.
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* gnu/packages/syncthing.scm (go-github-com-vitrun-qart-qr)[description]:
Remove duplicate 'description' field.
2018-04-21 05:29:53 -04:00
6b2752526b
gnu: uget: Remove duplicate 'native-inputs' field.
...
* gnu/packages/bittorrent.scm (uget)[native-inputs]: Remove duplicate
field initializer.
2018-04-21 05:29:42 -04:00
3fe49e5015
gnu: linux-libre@4.9: Update to 4.9.95.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.95.
2018-04-21 03:02:57 -04:00
9a58840235
gnu: Add osc.
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* gnu/packages/build-tools.scm (osc): New variable.
2018-04-21 08:40:40 +02:00
2f69121808
gnu: Add python-m2crypto, python2-m2crypto.
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* gnu/packages/python-crypto.scm (python-m2crypto): New variable.
(python2-m2crypto): New variable.
2018-04-21 08:40:40 +02:00
c596461187
gnu: Add python2-urlgrabber.
...
* gnu/packages/python-web (python2-urlgrabber): New variable.
2018-04-21 08:40:40 +02:00
15ed90b960
gnu: Add python-onetimepass.
...
* gnu/packages/python.scm (python-onetimepass): New variable.
2018-04-21 08:33:34 +02:00
b5178b3254
gnu: perl: Hack the replacement perl to think it is version 5.26.1.
...
Fixes <https://bugs.gnu.org/31216 >.
This is a followup to commits 217b8c2e0644b98b0002
2018-04-21 01:17:44 -04:00
5618193694
gnu: perl: Add more compatibility symlinks to the replacement perl.
...
Fixes <https://bugs.gnu.org/31216 >.
Reported by Julien Lepiller <julien@lepiller.eu>.
* gnu/packages/perl.scm (perl-5.26.2)[arguments]: Rename the
'workaround-grafting-version-bug' phase to 'install-compatibility-symlinks'.
Install symlinks in $out/lib/perl5/site_perl/5.26.1 and $out/bin/perl5.26.1,
in addition to $out/lib/perl5/5.26.1. Simplify the code a bit.
2018-04-20 23:29:14 -04:00
1af4212ae4
gnu: emacs-org, emacs-org-contrib: Update version.
...
* gnu/packages/emacs.scm (emacs-org): Update to 9.1.10.
(emacs-org-contrib): Update to 20180416.
2018-04-20 12:31:28 +02:00
582c122e7b
gnu: emacs-sx: Fix byte compilation.
...
The package would fail building when attempting to create a cache
directory. This has been fixed upstream but not in a tagged release.
* gnu/packages/emacs.scm (emacs-sx): Update to latest git version.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 15:38:32 +05:30
9835a71d80
gnu: emacs-esxml: Fix byte compilation.
...
* gnu/packages/emacs.scm (emacs-esxml)[arguments]: Add fix-sources phase.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 14:49:26 +05:30
62950ec7e9
gnu: Add emacs-kv.
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* gnu/packages/emacs.scm (emacs-kv): New variable.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 14:49:20 +05:30
9324d92e6a
gnu: lvm2: Enable pkg-config files generation.
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* gnu/packages/linux.scm (lvm2)[arguments]: Enable pkg-config files generation
via configure flag.
2018-04-20 10:38:50 +02:00
e60352e453
gnu: Add go-golang-org-x-crypto-ssh-terminal.
...
* gnu/packages/golang.scm (go-golang-org-x-crypto-ssh-terminal): New variable.
2018-04-20 10:38:31 +02:00
5368e67c4e
gnu: emacs-realgud: Update to 1.4.5.
...
* gnu/packages/emacs.scm (emacs-realgud): Update to 1.4.5.
2018-04-20 13:42:58 +05:30
aea388cf36
gnu: emacs-realgud: Fix autogen.sh after EMACSLOADPATH is set.
...
* gnu/packages/emacs.scm (emacs-realgud)[arguments]: Move the
fix-autogen-script phase to after the set-emacs-load-path phase.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 13:30:39 +05:30
872bda5de5
gnu: linux-libre: Update to 4.16.3.
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* gnu/packages/linux.scm (%linux-libre-version): Update to 4.16.3.
(%linux-libre-hash): Update hash.
2018-04-19 18:55:23 -04:00
58f427de8a
gnu: linux-libre@4.14: Update to 4.14.35.
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* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.35.
(%linux-libre-4.14-hash): Update hash.
2018-04-19 18:54:25 -04:00
652741cf28
gnu: emacs-deferred: Enable tests.
...
* gnu/packages/emacs.scm (emacs-deferred)[arguments]: Add fix-makefile
phase. Set #:test-command, and enable tests.
[native-inputs]: Add emacs-ert-expectations, emacs-undercover and ert-runner.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 02:09:10 +05:30
1848cdfb7d
gnu: emacs-memoize: Update to 1.1.
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* gnu/packages/emacs.scm (emacs-memoize): Update to 1.1. Re-indent.
[source]: Switch to release tarball.
[arguments]: Remove "-l" "memoize.el" from #:test-command.
2018-04-20 01:09:46 +05:30
bf5c74e713
gnu: doc: Add French documentation.
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* doc/contributing.fr.texi: New file.
* doc/guix.fr.texi: New file.
* doc/local.mk (TRANSLATED_INFO): Add them.
(info_TEXINFOS): Add guix.fr.texi.
* po/doc/contributing.fr.po: New file.
* po/doc/guix.fr.po: New file.
* po/doc/local.mk (EXTRA_DIST): Add them.
2018-04-19 21:32:07 +02:00
76fa5e042b
gnu: guix: Add po4a input.
...
* gnu/packages/package-management.scm (guix)[inputs]: Add po4a.
2018-04-19 21:30:49 +02:00
b9fe8fd662
gnu: doc: Allow documentation to be translated.
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* po/doc/contributing.pot: New file.
* po/doc/guix.pot: New file.
* po/doc/local.mk: New file.
* Makefile.am: Include it. Add gettext command. Add silent rules for po4a.
* configure.ac: Look for po4a-translate and po4a-updatepo.
* doc/local.mk: Add rules to generate translated texi files.
(TRANSLATED_INFO): New variable.
(BUILT_SOURCES, EXTRA_DIST, MAINTAINERCLEANFILES): Add it.
* .gitignore: Add generated files.
2018-04-19 21:30:30 +02:00
9490c411f0
gnu: ert-runner: Adjust ert-runner wrapper to honor EMACSLOADPATH.
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* gnu/packages/emacs.scm (ert-runner): Use 'prefix instead of '= for setting
the EMACSLOADPATH environment variable. Reuse the already computed
EMACSLOADPATH for wrap-program. Specify the dependencies directly in the
inputs field.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 00:49:53 +05:30
d1d41db6bb
gnu: Adapt Emacs packages to use the new check phase.
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* gnu/packages/emacs.scm (emacs-dash, emacs-s, emacs-string-inflection,
emacs-company, emacs-clojure-mode, emacs-julia-mode, emacs-elfeed,
emacs-memoize, emacs-use-package, emacs-xmlgen, emacs-json-reformat,
emacs-which-key, emacs-ws-butler, emacs-git-messenger, emacs-browse-at-remote,
emacs-evil-quickscope)[arguments]: Add #:tests? and #:test-command arguments
to use the new check phase.
(emacs-json-reformat)[inputs]: Move emacs-dash and emacs-shut-up to ...
[native-inputs]: here. Add ert-runner.
(emacs-company)[arguments]: Refactor fix-bin-dir phase.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 00:49:53 +05:30
facc0a96a1
build-system: emacs: Add improved check phase.
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* guix/build-system/emacs.scm (emacs-build): Add #:test-command keyword
argument. Remove #:configure-flags and #:test-target keyword arguments.
* guix/build/emacs-build-system.scm (check): New procedure.
(%standard-phases): Register check phase after the build phase.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 00:49:53 +05:30
8a8fa82e72
build-system: emacs: Replace system* with invoke.
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* guix/build/emacs-utils.scm: Use (guix build utils) for invoke.
(emacs-batch-eval, emacs-batch-edit-file): Replace system* with invoke.
* guix/build/emacs-build-system.scm (make-autoloads): No need to return #t
explicitly since emacs-generate-autoloads now uses invoke.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 00:49:53 +05:30
259ed58fef
gnu: emacs-pdf-tools: Fix byte compilation.
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* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Add
emacs-set-emacs-load-path phase.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 00:49:53 +05:30
b5904fcc34
build-system: emacs: Search all inputs for Emacs Lisp directories.
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* guix/build/emacs-build-system.scm (set-emacs-load-path): Include Emacs Lisp
directories from all inputs. Also, add the unpacked source directory to
EMACSLOADPATH.
(emacs-inputs, emacs-inputs-directories, emacs-input->el-directory,
emacs-inputs-el-directories): Remove.
(%standard-phases): Move set-emacs-load-path phase to after unpack phase.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-20 00:49:47 +05:30
Ricardo Wurmus