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30098 Commits

Author SHA1 Message Date
rsiddharth 0f163f653e
gnu: Add ghc-aeson-compat. 
* gnu/packages/haskell.scm (ghc-aeson-compat): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:36 +02:00
rsiddharth 104e179d56
gnu: Add ghc-persistent. 
* gnu/packages/haskell.scm (ghc-persistent): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:34 +02:00
rsiddharth b6d8ea42a3
gnu: Add ghc-http-api-data. 
* gnu/packages/haskell.scm (ghc-http-api-data): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:32 +02:00
rsiddharth c56a30b3ba
gnu: Add ghc-time-locale-compat. 
* gnu/packages/haskell.scm (ghc-time-locale-compat): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:30 +02:00
rsiddharth 8ecefe72c1
gnu: Add ghc-uri-bytestring. 
* gnu/packages/haskell.scm (ghc-uri-bytestring): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:28 +02:00
rsiddharth e99bd15cbb
gnu: Add ghc-generics-sop. 
* gnu/packages/haskell.scm (ghc-generics-sop): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:26 +02:00
rsiddharth ff7dd11f0a
gnu: Add ghc-th-lift-instances. 
* gnu/packages/haskell.scm
(ghc-th-lift-instances): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:23 +02:00
rsiddharth ac7cdb40ab
gnu: Add ghc-attoparsec-iso8601. 
* gnu/packages/haskell.scm (ghc-attoparsec-iso8601): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:21 +02:00
rsiddharth d96a1bfe2b
gnu: Add ghc-resource-pool. 
* gnu/packages/haskell.scm (ghc-resource-pool): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:18 +02:00
rsiddharth aebe9d2556
gnu: Add ghc-yesod-core. 
* gnu/packages/haskell-web.scm (ghc-yesod-core): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:27:09 +02:00
rsiddharth 15b9ce634c
gnu: Add ghc-clientsession. 
* gnu/packages/haskell-web.scm (ghc-clientsession): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:26:58 +02:00
rsiddharth 7565a30893
gnu: Add ghc-cprng-aes. 
* gnu/packages/haskell-crypto.scm (ghc-cprng-aes): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:26:53 +02:00
rsiddharth 13c281672d
gnu: Add ghc-crypto-random. 
* gnu/packages/haskell-crypto.scm (ghc-crypto-random): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:26:50 +02:00
rsiddharth d91acee78f
gnu: Add ghc-cipher-aes. 
* gnu/packages/haskell-crypto.scm (ghc-cipher-aes): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:26:19 +02:00
rsiddharth 47a6582b12
gnu: Add ghc-crypto-cipher-tests. 
* gnu/packages/haskell-check.scm
(ghc-crypto-cipher-tests): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:26:04 +02:00
rsiddharth aab6df5b63
gnu: Add ghc-crypto-cipher-types. 
* gnu/packages/haskell-crypto.scm
(ghc-crypto-cipher-types): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:26:00 +02:00
rsiddharth 54f3536d55
gnu: Add ghc-securemem. 
* gnu/packages/haskell.scm (ghc-securemem): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:25:50 +02:00
rsiddharth 122260b390
gnu: Add ghc-skein. 
* gnu/packages/haskell-web.scm (ghc-skein): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:25:44 +02:00
rsiddharth 448d6226e3
gnu: Add ghc-path-pieces. 
* gnu/packages/haskell-web.scm (ghc-path-pieces): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:25:40 +02:00
rsiddharth b2b4575dca
gnu: Add ghc-shakespeare. 
* gnu/packages/haskell.scm (ghc-shakespeare): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:25:33 +02:00
rsiddharth fe9b5eff7b
gnu: Add ghc-monad-logger. 
* gnu/packages/haskell.scm (ghc-monad-logger): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:25:25 +02:00
rsiddharth fddb41f22b
gnu: Add ghc-monad-loops. 
* gnu/packages/haskell.scm (ghc-monad-loops): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:24:44 +02:00
rsiddharth bb87be09a9
gnu: Add ghc-stm-chans. 
* gnu/packages/haskell.scm (ghc-stm-chans): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:24:37 +02:00
rsiddharth d6e559ab29
gnu: ghc-chunked-data: Update inputs. 
* gnu/packages/haskell.scm (ghc-chunked-data)[inputs]: Add ghc-text.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:24:10 +02:00
Sohom Bhattacharjee 62d1105c88
gnu: Add emacs-anzu. 
* gnu/packages/emacs.scm (emacs-anzu): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-31 19:23:11 +02:00
Rutger Helling 2ac9f2a2b3
gnu: wine-staging: Update to 3.5. 
* gnu/packages/wine.scm (wine-staging): Update to 3.5.
 2018-03-31 09:16:24 +02:00
Rutger Helling 5125b3d5b0
gnu: wine-staging-patchset-data: Update to 3.5. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 3.5.
 2018-03-31 09:16:24 +02:00
Nils Gillmann f5fa1bdc1a
gnu: python-pycanberra: Update to new upstream location. 
* gnu/packages/libcanberra (python-pycanberra)[source]: Use new URL.
[home-page]: Change to new URL.

Signed-off-by: Nils Gillmann <ng0@n0.is>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-30 23:42:07 +02:00
Pierre Neidhardt abc4a3325e
gnu: Add pinentry-emacs. 
* gnu/packages/gnupg.scm (pinentry-emacs): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2018-03-30 23:42:07 +02:00
Ludovic Courtès 602a148650
daemon: Remove unused schema upgrade code. 
* nix/libstore/local-store.cc (LocalStore): Remove upgrade code.
(LocalStore::queryValidPathsOld, LocalStore::queryPathInfoOld)
(LocalStore::upgradeStore6, makeMutable)
(LocalStore::upgardeStore7): Remove.
* nix/libstore/local-store.hh: Adjust accordingly.
 2018-03-30 23:42:07 +02:00
Ludovic Courtès c7589cce8d
daemon: Remove dead code. 
* nix/libstore/globals.cc (Settings::loadConfFile, Settings::unpack):
Remove.
* nix/libstore/globals.hh: Adjust accordingly.
* nix/libstore/misc.cc (queryMissing): Remove.
* nix/libstore/misc.hh: Adjust accordingly.
* nix/libstore/store-api.cc (followLinksToStore)
(followLinksToStorePath, computeStorePathForHash): Remove.
* nix/libstore/store-api.hh: Adjust accordingly.
 2018-03-30 23:42:07 +02:00
Mark H Weaver dffd077c59
gnu: linux-libre: Update to 4.15.14. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.15.14.
(%linux-libre-hash): Update hash.
 2018-03-30 17:33:55 -04:00
Mark H Weaver cd3a0bcd1d
gnu: linux-libre@4.14: Update to 4.14.31. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.31.
(%linux-libre-4.14-hash): Update hash.
 2018-03-30 17:33:09 -04:00
Mark H Weaver ce484f1e09
gnu: linux-libre@4.9: Update to 4.9.91. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.91.
 2018-03-30 17:32:35 -04:00
Mark H Weaver e67512df40
gnu: linux-libre@4.4: Update to 4.4.125. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.125.
 2018-03-30 17:32:02 -04:00
Mark H Weaver 619d7bffa0
gnu: linux-libre@4.1: Update to 4.1.51. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.51.
 2018-03-30 17:31:15 -04:00
Julien Lepiller a7baa201cb
gnu: Update php to 7.2.4. 
* gnu/packages/php.scm (php): Update to 7.2.4.
 2018-03-30 23:22:18 +02:00
Ricardo Wurmus 4bd8a9d8e2
gnu: Define ao. 
This is a follow-up to commit 28f4d56dd3.

* gnu/packages/engineering.scm (ao): Restore variable definition.
 2018-03-30 22:54:51 +02:00
Ricardo Wurmus 28f4d56dd3
gnu: ao: Update to 0-2.9d857d1. 
* gnu/packages/engineering.scm (ao): Rename...
(libfive): ...to this new variable; update to 0-2.9d857d1.
[inputs]: Remove glfw, libepoxy, glm, guile-2.0; add qtbase, guile-2.2.
[home-page]: Use new libfive home page.
[description]: Adjust.
(ao): Redefine using 'deprecated-package'.
 2018-03-30 22:23:43 +02:00
Nicolas Goaziou 2d19a7e4f4
gnu: emacs-org: Change source and naming scheme. 
* gnu/packages/emacs.scm (emacs-org): Switch back to ELPA.  Adopt its naming
  scheme.
 2018-03-30 20:03:36 +02:00
Nicolas Goaziou 5ecd2d28d0
gnu: emacs-org-contrib: Fix build. 
* gnu/packages/emacs.scm (emacs-org-contrib): Update SHA256.
[version]: Add keyword.
[arguments]: Use new keyword.
 2018-03-30 20:03:31 +02:00
Roel Janssen fdc306879b
gnu: Add delly. 
* gnu/packages/bioinformatics.scm (delly): New variable.
* gnu/packages/patches/delly-use-system-libraries.patch: New file.
* gnu/local.mk: Include delly-use-system-libraries.patch.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-03-30 10:48:01 -04:00
Roel Janssen 183ce98849
gnu: Add r-regioner. 
* gnu/packages/bioconductor.scm (r-regioner): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-03-30 10:47:57 -04:00
Nikolai Merinov f342bb58fe
gnu: rust: Update rust to 1.24.1. 
* gnu/packages/rust.scm (rust-bootstrap): Freeze bootstrap version to 1.22.1.
Reorganize bootstrap binaries to match new "rust" package structure with two
ouputs "out" with Rust compiler and "cargo" with Cargo package manager.
Replace all "system*" by "invoke".
(rust-1.23): Rename "rustc" to "rust".  Update sha256 for tarball.  Add cargo
related dependencies.  Install "cargo" as separate "rust" output.  Remove
substitutes for parts that were fixed in "rustc" source code.  Install
documentation to separate "doc" output.  Update configuration according to
changes in "rustc" source code.  Replace all "system*" by "invoke".
(rust): Create package for 1.24.1 rust release based on rust-1.23 release.
* guix/build-system/cargo.scm (default-rust): Replace "default-cargo" and
"default-rustc" functions with "default-rust" function.
(cargo-build-system): Take only one package as "rust" source.  Use "rustc" of
default output of "rust" package, use "cargo" as "cargo" output of "rust"
package.
 2018-03-30 15:46:53 +02:00
Ben Woodcroft 8456a4c5cb
gnu: ruby-2.2: Update to 2.2.10. 
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.10.
 2018-03-30 12:27:57 +10:00
Ben Woodcroft 049edeb24c
gnu: ruby-2.3: Update to 2.3.7. 
* gnu/packages/ruby.scm (ruby-2.3): Update to 2.3.7.
 2018-03-30 12:24:59 +10:00
Ben Woodcroft f38ac742e6
gnu: mash: Update to 2.0. 
* gnu/packages/bioinformatics.scm (mash): Update to 2.0.
 2018-03-30 12:18:35 +10:00
Ben Woodcroft c7a8aa131d
gnu: mafft: Update to 7.394. 
* gnu/packages/bioinformatics.scm (mafft): Update to 7.394.
 2018-03-30 12:18:35 +10:00
Ben Woodcroft 9a40b8d9b2
gnu: diamond: Update to 0.9.19. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.19.
 2018-03-30 12:18:35 +10:00
Ricardo Wurmus 315ed91efb
gnu: pybitmessage: Update to 0.6.3.2 [security fixes]. 
* gnu/packages/messaging.scm (pybitmessage): Update to 0.6.3.2.
[source]: Fetch from git.
 2018-03-29 22:43:37 +02:00