Commit Graph

24052 Commits (1293f6d8a4dfad23ec693a1f2785cdb8d09b36f6)

Author SHA1 Message Date
Marius Bakke 426284d855
gnu: strace: Update to 4.22.
* gnu/packages/linux.scm (strace): Update to 4.22.
[source](uri): Download from home page.
2018-04-06 17:46:03 +02:00
Marius Bakke 67b5785e3c
gnu: ldc, bap: Build with Clang 3.8.
* gnu/packages/ldc.scm (ldc-bootstrap, ldc): Change LLVM and CLANG to LLVM-3.8
and CLANG-3.8.
* gnu/packages/ocaml.scm (bap)[native-inputs]: Change CLANG to CLANG-3.8.
[propagated-inputs, inputs]: Change LLVM to LLVM-3.8.
2018-04-06 17:46:03 +02:00
Marius Bakke 9bdbabe963
gnu: llvm, clang: Update to 6.0.0.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 6.0.0.
(clang-from-llvm)(patches): Set to empty list.
[arguments]: Adjust substitutions depending on major version.
(llvm-3.8, clang-runtime-3.8, clang-3.8): New public variables.
(clang-3.7, clang-3.6, clang-3.5)(patches): Add 'clang-3.5-libc-search-path.patch'.
(clang-3.9.1)(patches): Add 'clang-3.8-libc-search-path.patch'.
* gnu/packages/patches/clang-6.0-libc-search-path.patch: New file.
* gnu/packages/patches/clang-libc-search-path.patch: Rename to ...
* gnu/packages/patches/clang-3.5-libc-search-path.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-04-06 17:46:03 +02:00
Ricardo Wurmus 482959ffa4
gnu: sambamba: Update to 0.6.7-10-g223fa20.
* gnu/packages/bioinformatics.scm (sambamba)[source]: Fetch from git.
[arguments]: Disable parallel build; rename build phase "place-biod" to
"place-biod-and-undead"; add build phase "fix-ldc-version"; adjust phase
"unbundle-prerequisites".
[native-inputs]: Add python2-minimal; update biod sources; add undead sources.
2018-04-06 17:12:15 +02:00
Ricardo Wurmus 262ee8eae2
gnu: htslib-for-sambamba: Fix build.
* gnu/packages/bioinformatics.scm (htslib-for-sambamba)[arguments]: Do not
inherit htslib arguments.
2018-04-06 17:12:07 +02:00
Marius Bakke 169c658f7f
gnu: tar: Skip racy tests.
* gnu/packages/base.scm (tar)[arguments]: Skip two more tests in #:make-flags.
2018-04-06 15:22:24 +02:00
Leo Famulari ae81bf4f99
gnu: certbot: Update to 0.23.0.
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.23.0.
2018-04-05 23:20:25 -04:00
Marius Bakke 3359a70834
gnu: make-bootstrap: Inherit tar arguments in %static-inputs.
* gnu/packages/make-bootstrap.scm (%static-inputs)[tar]: Use
SUBSTITUTE-KEYWORD-ARGUMENTS so #:make-flags are inherited.
2018-04-05 23:42:26 +02:00
Julien Lepiller cfb55cfc4a
gnu: Add java-native-access-platform.
* gnu/packages/java.scm (java-native-access-platform): New variable.
2018-04-05 19:48:06 +02:00
Julien Lepiller a970288c8e
gnu: Add java-native-access.
* gnu/packages/java.scm (java-native-access): New variable.
2018-04-05 19:48:00 +02:00
Julien Lepiller f7b512c084
gnu: Add java-jakarta-oro.
* gnu/packages/java.scm (java-jakarta-oro): New variable.
2018-04-05 19:47:58 +02:00
Julien Lepiller 5fe981dc83
gnu: Add java-commons-vfs.
* gnu/packages/java.scm (java-commons-vfs): New variable.
2018-04-05 19:47:56 +02:00
Julien Lepiller 5f5b31c63f
gnu: Add java-commons-httpclient.
* gnu/packages/java.scm (java-commons-httpclient): New variable.
2018-04-05 19:47:54 +02:00
Julien Lepiller afb13a1002
gnu: Add java-commons-bsf.
* gnu/packages/java.scm (java-commons-bsf): New variable.
2018-04-05 19:47:52 +02:00
Julien Lepiller 37602dd8ba
gnu: Update java-commons-cli to 1.4.
* gnu/packages/java.scm (java-commons-cli): Update to 1.4.
2018-04-05 19:47:50 +02:00
Julien Lepiller 49d743117b
gnu: Add java-jline-2.
* gnu/packages/java.scm (java-jline-2): New variable.
2018-04-05 19:47:46 +02:00
Leo Famulari d355245030
gnu: openssh: Update to 7.7p1.
* gnu/packages/ssh.scm (openssh): Update to 7.7p1.
[arguments]: Set the test suite's working directory in #:make-flags.
2018-04-05 11:51:55 -04:00
Marius Bakke 44e3e431cd
gnu: make-bootstrap: Adjust gawk patch to 4.2.1.
* gnu/packages/patches/gawk-shell.patch: Update for 4.2.1.
2018-04-05 17:07:43 +02:00
David Thompson 6de2af288f
gnu: tiled: Update to 1.1.4.
* gnu/packages/game-development.scm (tiled): Update to 1.1.4.
2018-04-05 09:41:24 -04:00
Pierre Neidhardt f27f264e51
gnu: Add subdl.
* gnu/packages/video.scm (subdl): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-04-05 02:29:28 -04:00
Tobias Geerinckx-Rice fadc55330d
gnu: iptables: Remove trailing newline from description.
...introduced in be5dc5fb18.

* gnu/packages/linux.scm (iptables)[description]: Remove trailing newline.
2018-04-05 06:39:02 +02:00
Tobias Geerinckx-Rice 4bac91e1d8
gnu: perl-db-file: Update to 1.841.
* gnu/packages/databases.scm (perl-db-file): Update to 1.841.
2018-04-05 06:39:02 +02:00
Tobias Geerinckx-Rice 7b3a95e5d4
gnu: licensecheck: Update to 3.0.34.
* gnu/packages/license.scm (licensecheck): Update to 3.0.34.
2018-04-05 06:39:01 +02:00
Tobias Geerinckx-Rice 4b23535351
gnu: cppcheck: Update to 1.83.
* gnu/packages/check.scm (cppcheck): Update to 1.83.
2018-04-05 06:39:01 +02:00
Tobias Geerinckx-Rice 65cbfa7ebf
gnu: gama: Update to 1.22.
* gnu/packages/gps.scm (gama): Update to 1.22.
2018-04-05 06:39:01 +02:00
Tobias Geerinckx-Rice f560acf8d9
gnu: lmdb: Update to 0.9.22.
* gnu/packages/databases.scm (lmdb): Update to 0.9.22.
2018-04-05 06:39:01 +02:00
Tobias Geerinckx-Rice 36e8cfa19a
gnu: getmail: Update to 5.6.
* gnu/packages/mail.scm (getmail): Update to 5.6.
2018-04-05 06:39:00 +02:00
Tobias Geerinckx-Rice ada3b94ffb
gnu: jpegoptim: Use HTTPS home page.
* gnu/packages/image.scm (jpegoptim)[home-page]: Use HTTPS.
2018-04-05 06:39:00 +02:00
Tobias Geerinckx-Rice e8da8bb1cc
gnu: jpegoptim: Update to 1.4.5.
* gnu/packages/image.scm (jpegoptim): Update to 1.4.5.
2018-04-05 06:39:00 +02:00
Tobias Geerinckx-Rice 07922c501d
gnu: debootstrap: Update to 1.0.95.
* gnu/packages/debian.scm (debootstrap): Update to 1.0.95.
2018-04-05 06:39:00 +02:00
Tobias Geerinckx-Rice 00172e171c
gnu: czmq: Update to 4.1.1.
* gnu/packages/networking.scm (czmq): Update to 4.1.1.
2018-04-05 06:39:00 +02:00
Tobias Geerinckx-Rice ce9ae8a1c3
gnu: musescore: Update to 2.2.1.
* gnu/packages/music.scm (musescore): Update to 2.2.1.
2018-04-05 06:38:59 +02:00
Tobias Geerinckx-Rice 9767800687
gnu: mate-themes: Update to 3.22.16.
* gnu/packages/mate.scm (mate-themes): Update to 3.22.16.
2018-04-05 06:38:59 +02:00
Tobias Geerinckx-Rice fb5f8f0135
gnu: asymptote: Update to 2.42.
* gnu/packages/plotutils.scm (asymptote): Update to 2.42.
2018-04-05 06:38:59 +02:00
Tobias Geerinckx-Rice 408626774b
gnu: Use HTTPS for statnet.org home pages.
* gnu/packages/cran.scm (r-network, r-statnet-common, r-sna)[home-page]:
Use HTTPS and canonical domain name.
2018-04-05 06:38:59 +02:00
Tobias Geerinckx-Rice 92edaaea27
gnu: r-network: Update to 1.13.0.1.
* gnu/packages/cran.scm (r-network): Update to 1.13.0.1.
2018-04-05 06:38:58 +02:00
Tobias Geerinckx-Rice ba578d937d
gnu: r-lmtest: Update to 0.9-36.
* gnu/packages/cran.scm (r-lmtest): Update to 0.9-36.
2018-04-05 06:38:58 +02:00
Tobias Geerinckx-Rice 14b78ca6dc
gnu: r-broom: Update to 0.4.4.
* gnu/packages/cran.scm (r-broom): Update to 0.4.4.
2018-04-05 06:38:58 +02:00
Tobias Geerinckx-Rice e155c6034b
gnu: r-ggthemes: Update to 3.4.2.
* gnu/packages/statistics.scm (r-ggthemes): Update to 3.4.2.
2018-04-05 06:38:58 +02:00
Tobias Geerinckx-Rice 184020432b
gnu: r-caret: Update to 6.0-79.
* gnu/packages/statistics.scm (r-caret): Update to 6.0-79.
2018-04-05 06:38:57 +02:00
Tobias Geerinckx-Rice 0cb4fb81da
gnu: r-viridis: Update to 0.5.1.
* gnu/packages/statistics.scm (r-viridis): Update to 0.5.1.
2018-04-05 06:38:57 +02:00
Tobias Geerinckx-Rice ec2a2682fe
gnu: r-matrix: Update to 1.2-13.
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-13.
2018-04-05 06:38:57 +02:00
Tobias Geerinckx-Rice 9ed1824eeb
gnu: r-cluster: Update to 2.0.7.
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.7.
2018-04-05 06:38:57 +02:00
Tobias Geerinckx-Rice 4c44dd7aca
gnu: r-glmnet: Update to 2.0-16.
* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-16.
2018-04-05 06:38:56 +02:00
Tobias Geerinckx-Rice d22d746822
gnu: python-gst: Update to 1.12.5.
* gnu/packages/gstreamer.scm (python-gst): Update to 1.12.5.
2018-04-05 06:38:56 +02:00
Tobias Geerinckx-Rice dc944249d9
gnu: sshuttle: Update to 0.78.4.
* gnu/packages/vpn.scm (sshuttle): Update to 0.78.4.
2018-04-05 06:38:56 +02:00
Tobias Geerinckx-Rice bc32521a5b
gnu: nginx-documentation: Update to 2018-04-04-2131-dbaf3950f8e9.
* gnu/packages/web.scm (nginx-documentation): Update to
2018-04-04-2131-dbaf3950f8e9.
2018-04-05 06:38:55 +02:00
Tobias Geerinckx-Rice c70935a939
gnu: nginx: Update to 1.13.11.
* gnu/packages/web.scm (nginx): Update to 1.13.11.
2018-04-05 06:38:55 +02:00
Adam Massmann b357ccdd8b
gnu: xapers: Fix man page and xapers-adder installation
* gnu/packages/search.scm (xapers)[arguments]: Adjust install-file
destinations in install-doc phase.

Signed-off-by: Eric Bavier <bavier@member.fsf.org>
2018-04-04 21:19:08 -05:00
Leo Famulari b4eadf7e7f
gnu: syncthing: Update to 0.14.46.
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.46.
2018-04-04 18:31:12 -04:00
Leo Famulari dc0ec9914c
gnu: go-github-com-zillode-notify: Update to 0.0.0-3.53dd687.
* gnu/packages/syncthing.scm (go-github-com-zillode-notify): Update to
0.0.0-3.53dd687.
[source]: Update URL.
[arguments]: Update #:import-path.
2018-04-04 18:31:12 -04:00
Roel Janssen 723225c32c
gnu: Add perl-statistics-basic.
* gnu/packages/perl.scm (perl-statistics-basic): New variable.
2018-04-04 20:53:48 +02:00
Roel Janssen 25c4743156
gnu: Add perl-time-hires.
* gnu/packages/perl.scm (perl-time-hires): New variable.
2018-04-04 16:59:34 +02:00
Adam Massmann f50bad80a9
gnu: Add xapers
* gnu/packages/search.scm (xapers): New variable.

Signed-off-by: Eric Bavier <bavier@member.fsf.org>
2018-04-04 09:35:21 -05:00
Adam Massmann 2514fc1d69
gnu: Add python-pybtex
* gnu/packages/python.scm (python-pybtex): New variable.

Signed-off-by: Eric Bavier <bavier@member.fsf.org>
2018-04-04 09:35:21 -05:00
Adam Massmann c2b2f0c866
gnu: Add python-latexcodec
* gnu/packages/python.scm (python-latexcodec): New variable.

Signed-off-by: Eric Bavier <bavier@member.fsf.org>
2018-04-04 09:35:15 -05:00
Roel Janssen f0196e82b8
gnu: Add perl-text-format.
* gnu/packages/perl.scm (perl-text-format): New variable.
2018-04-04 16:15:59 +02:00
Roel Janssen bd468c975d
gnu: Add perl-set-intspan.
* gnu/packages/perl.scm (perl-set-intspan): New variable.
2018-04-04 15:58:18 +02:00
Tomáš Čech 0d0cf3b0f6
python: python-py3status: Update to 3.7.
* gnu/packages/python.scm (python-py3status): Update to 3.7.
 [arguments]: Adjust string substitution.
2018-04-04 15:51:20 +02:00
Roel Janssen 55dc003877
gnu: Add perl-number-format.
* gnu/packages/perl.scm (perl-number-format): New variable.
2018-04-04 15:48:55 +02:00
Roel Janssen 1a014680c8
gnu: Add perl-math-bezier.
* gnu/packages/perl.scm (perl-math-bezier): New variable.
2018-04-04 15:44:15 +02:00
Roel Janssen 821aaa9ca5
gnu: Add perl-threads.
* gnu/packages/perl.scm (perl-threads): New variable.
2018-04-04 15:35:08 +02:00
Roel Janssen 5a6e23fb1b
gnu: Add perl-math-round.
* gnu/packages/perl.scm (perl-math-round): New variable.
2018-04-04 15:22:19 +02:00
Roel Janssen e147856397
gnu: Add perl-memoize.
* gnu/packages/perl.scm (perl-memoize): New variable.
2018-04-04 15:16:53 +02:00
Roel Janssen 0d5c19452f
gnu: Add perl-font-ttf.
* gnu/packages/perl.scm (perl-font-ttf): New variable.
2018-04-04 15:07:50 +02:00
Roel Janssen ea09f99f7f
gnu: 4store: Remove preprocessor directive.
* gnu/packages/databases.scm (4store): Add patch to remove preprocessor
  directive.
* gnu/packages/patches/4store-unset-preprocessor-directive.patch: New file.
* gnu/local.mk: Register patch.
2018-04-04 14:54:02 +02:00
Roel Janssen b028a9830c
gnu: Add perl-pathtools.
* gnu/packages/perl.scm (perl-pathtools): New variable.
2018-04-04 14:50:37 +02:00
Konrad Hinsen 03efe78c34
gnu: Add emacs-password-store.
* gnu/packages/emacs.scm (emacs-password-store): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-04 14:39:39 +02:00
Mathieu Lirzin 95f3b626d7
gnu: Add python-empy.
* gnu/packages/python.scm (python-empy): New variable.
(python2-empy): Use 'package-with-python-2'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-04 14:39:39 +02:00
Mathieu Lirzin c3581ef968
gnu: Add emacs-emmet-mode.
* gnu/packages/emacs.scm (emacs-emmet-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-04 14:39:39 +02:00
Mathieu Lirzin d56ecf623e
gnu: Add dot2tex.
* gnu/packages/graphviz.scm (dot2tex): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-04 14:39:39 +02:00
Pierre Neidhardt a509041f2a
gnu: chromaprint: Build 'fpcalc'.
* gnu/packages/mp3.scm (chromaprint)[arguments]: Add #:configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-04 14:39:39 +02:00
Vijayalakshmi Vedantham 8b209bb692
gnu: Add python-django-override-storage.
* gnu/packages/django.scm (python-django-override-storage): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-04 14:39:39 +02:00
Rutger Helling 02e7e3f973
gnu: xpra: Update to 2.2.6.
* gnu/packages/xorg.scm (xpra): Update to 2.2.6.
2018-04-04 12:03:42 +02:00
Tobias Geerinckx-Rice 689d53fa49
gnu: iproute2: Update to 4.16.0.
* gnu/packages/linux.scm (iproute): Update to 4.16.0.
2018-04-04 03:31:50 +02:00
Sohom Bhattacharjee 2d11acb61c
gnu: emacs-anzu: Use the upstream release instead of MELPA.
* gnu/packages/emacs.scm (emacs-anzu)[source]: Replace MELPA tarball with the
upstream release.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2018-04-03 22:40:38 +05:30
Roel Janssen 7ba2230897
gnu: Add perl-carp.
* gnu/packages/perl.scm (perl-carp): New variable.
2018-04-03 15:16:42 +02:00
Roel Janssen 9dfa3d2264
gnu: Add perl-inline-c.
* gnu/packages/perl.scm (perl-inline-c): New variable.
2018-04-03 14:43:13 +02:00
Roel Janssen 229241b1a4
gnu: Add perl-inline.
* gnu/packages/perl.scm (perl-inline): New variable.
2018-04-03 14:36:05 +02:00
Roel Janssen 9b3deccd60
gnu: Add perl-pegex.
* gnu/packages/perl.scm (perl-pegex): New variable.
2018-04-03 14:31:57 +02:00
Roel Janssen 6d09a7b5ec
gnu: virtuoso-ose: Unbundle zlib and build with readline support.
* gnu/packages/databases.scm (virtuoso-ose):
  [inputs]: Add zlib, and readline;
  [arguments]: Add --without-internal-zlib, and --with-readline.
2018-04-03 13:07:21 +02:00
Kyle Meyer d3d576616c
gnu: emacs-helm-swoop: Update to 1.7.4.
* gnu/packages/emacs.scm (emacs-helm-swoop): Update to 1.7.4.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-04-03 12:43:26 +02:00
Kyle Meyer e0b0cafdea
gnu: emacs-helm: Update to 2.9.0.
* gnu/packages/emacs.scm (emacs-helm): Update to 2.9.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-04-03 12:43:23 +02:00
Kyle Meyer 4fca8a028e
gnu: emacs-elfeed: Update to 2.3.0.
* gnu/packages/emacs.scm (emacs-elfeed): Update to 2.3.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-04-03 12:43:20 +02:00
Marius Bakke 5c151862c2
gnu: git: Update to 2.17.0.
* gnu/packages/version-control.scm (git): Update to 2.17.0.
[arguments]: Remove obsolete substitution.
2018-04-03 12:21:29 +02:00
Marius Bakke fc8c229f14
gnu: perl-mailtools: Update to 2.20.
* gnu/packages/perl.scm (perl-mailtools): Update to 2.20.
2018-04-03 12:15:58 +02:00
Tobias Geerinckx-Rice 426916b7a0
gnu: python-oslotest: Update to 3.4.0.
* gnu/packages/openstack.scm (python-oslotest): Update to 3.4.0.
2018-04-03 11:17:34 +02:00
Tobias Geerinckx-Rice 3cc7d54262
gnu: python-libvirt: Update to 4.1.0.
* gnu/packages/virtualization.scm (python-libvirt): Update to 4.1.0.
2018-04-03 11:17:34 +02:00
Tobias Geerinckx-Rice 35d56c1cbb
gnu: libvirt: Update to 4.2.0.
* gnu/packages/virtualization.scm (libvirt): Update to 4.2.0.
[native-inputs]: Replace python-2 with python (@3).
2018-04-03 11:17:34 +02:00
Sahithi Yarlagadda 82c8e0ae0a
gnu: Add r-abc.
* gnu/packages/cran.scm (r-abc): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-04-02 23:25:39 +02:00
Nicolas Goaziou b3891a25f8
gnu: musescore: Update to 2.2.
* gnu/packages/music.scm (musescore): Update to 2.2.
[arguments]: Use new flag for freetype and remove corresponding fix.  Prevent
downloading sound fonts during installation.
[inputs]: Add portmidi.
2018-04-02 23:21:13 +02:00
Nicolas Goaziou a374d9c9b0
gnu: portmidi: Create "libporttime.so" symlink.
* gnu/packages/music.scm (portmidi): Add an `add-portime' phase.
2018-04-02 23:20:07 +02:00
Ludovic Courtès b948c04745
gnu: cuirass: Update to f090c0f.
* gnu/packages/ci.scm (cuirass): Update to f090c0f.
2018-04-02 23:16:30 +02:00
Ludovic Courtès 576f245c2d
gnu: guile-git: Update to 36f93c1.
* gnu/packages/guile.scm (guile-git): Update to 36f93c1.
2018-04-02 23:16:30 +02:00
Sahithi Yarlagadda 2a27c0bbb8
gnu: Add r-abc-data.
* gnu/packages/cran.scm (r-abc-data): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-04-02 23:13:17 +02:00
Leo Famulari 7edb3e50ae
gnu: libressl: Update to 2.7.2.
* gnu/packages/tls.scm (libressl): Update to 2.7.2.
2018-04-02 15:11:47 -04:00
Leo Famulari e34977327d
gnu: botan: Update to 2.5.0.
* gnu/packages/crypto.scm (botan): Update to 2.5.0.
[arguments]: Remove 'fix-rst2man-invocation' phase.
2018-04-02 15:11:44 -04:00
Christopher Lemmer Webber 75afbd2478
gnu: racket: Patch xform compilation errors.
* gnu/packages/patches/gnu/packages/patches/racket-fix-xform-issue.patch:
Renamed from gnu/packages/patches/racket-minus_zero_p-disable-xform.patch.
Switch to upstream patch in Racket.
* gnu/packages/scheme.scm (racket): Update to renamed patch.
2018-04-02 10:38:08 -05:00
Christopher Lemmer Webber 02283a6130
gnu: racket: Update to 6.12.
* gnu/packages/patches/racket-minus_zero_p-disable-xform.patch: New file.
* gnu/packages/scheme.scm (racket): Update version and patch.
2018-04-02 10:38:08 -05:00
Marius Bakke 35b3135f5d
gnu: notmuch: Update to 0.26.1.
* gnu/packages/mail.scm (notmuch): Update to 0.26.1.
2018-04-02 17:04:28 +02:00