nixo
/
guix-devel
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity
39,873 Commits 1 Branch 0 Tags 104 MiB
Commit Graph

2196 Commits

Author SHA1 Message Date
Ricardo Wurmus ad3c61fcd3
gnu: python-hy: Update to 0.13.0. 
* gnu/packages/python.scm (python-hy): Update to 0.13.0.
 2017-10-19 01:37:52 +02:00
Marius Bakke 71d9f5614d
gnu: python-coverage: Update to 4.4.1. 
* gnu/packages/python.scm (python-coverage): Update to 4.4.1.
 2017-10-19 00:16:52 +02:00
Marius Bakke 7439173f2c
gnu: python-unittest2: Update to 1.1.0. 
* gnu/packages/python.scm (python-unittest2): Update to 1.1.0.
[source]: Use PYPI-URI. Add two patches.
[arguments]: Add phase to run tests.
[propagated-inputs]: Add PYTHON-SIX and PYTHON-TRACEBACK2.
(python2-unittest2): Use 'package-with-python2'.
* gnu/packages/patches/python2-unittest2-remove-argparse.patch: Rename to ...
* gnu/packages/patches/python2-unittest2-remove-argparse.patch: ... this.
* gnu/packages/patches/python-unittest2-python3-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2017-10-19 00:16:52 +02:00
Marius Bakke 5db49f7ac8
gnu: python-jinja2: Remove workaround for < Python 3.6. 
* gnu/packages/python.scm (python-jinja2)[arguments]: Remove field.
 2017-10-19 00:16:51 +02:00
Marius Bakke 4ae65558b8
gnu: Remove python-mock@1. 
* gnu/packages/python.scm (python-mock): Update to 2.0.0.
[native-inputs]: Add PYTHON-UNITTEST2.
[propagated-inputs]: Add PYTHON-PBR and PYTHON-SIX.
[arguments]: Override 'check' phase.
[properties]: Declare python2 variant.
(python2-mock)[propagated-inputs]: Add PYTHON2-FUNCTOOLS32 and PYTHON2-FUNCSIGS.
(python-mock-2): Remove variable.
* gnu/packages/python.scm (python-flake8)[native-inputs]: Adjust accordingly.
* gnu/packages/tls.scm (python-acme, certbot)[native-inputs]: Likewise.
 2017-10-19 00:16:51 +02:00
Marius Bakke 6bb9645e57
gnu: Add python2-funcsigs. 
* gnu/packages/python.scm (python2-funcsigs): New variable.
 2017-10-19 00:16:51 +02:00
Marius Bakke a0fd9a3ca9
gnu: python-flake8: Update to 3.4.1. 
* gnu/packages/python.scm (python-flake8): Update to 3.4.1.
[source]: Remove obsolete snippet.
[arguments]: Override 'check' phase.
[propagated-inputs]: Remove PYTHON-PEP8. Add PYTHON-PYCODESTYLE and
PYTHON-SETUPTOOLS.
[native-inputs]: Change PYTHON-MOCK to PYTHON-MOCK-2. Remove PYTHON-NOSE. Add
PYTHON-PYTEST-BOOTSTRAP and PYTHON-PYTEST-RUNNER.
[properties]: Declare python2 variant.
* gnu/packages/python.scm (python-flake8)[propagated-inputs]: Add PYTHON2-ENUM
and PYTHON2-CONFIGPARSER.
 2017-10-19 00:16:51 +02:00
Marius Bakke a6c6a59faf
gnu: Add python2-enum. 
* gnu/packages/python.scm (python2-enum): New variable.
 2017-10-19 00:16:51 +02:00
Marius Bakke 3e6218b2dd
gnu: Fix pytest dependency cycle. 
* gnu/packages/python.scm (python-traceback2,
python-linecache2)[native-inputs]: Use PYTHON-PBR-MINIMAL instead of PYTHON-PBR.
 2017-10-19 00:16:51 +02:00
Marius Bakke 8f65361286
gnu: python-mock@2: Add dependency on python-six. 
* gnu/packages/python.scm (python-mock-2)[propagated-inputs]: Add PYTHON-SIX.
 2017-10-19 00:16:50 +02:00
Marius Bakke 31612e1cee
gnu: python-mccabe: Update to 0.6.1. 
* gnu/packages/python.scm (python-mccabe): Update to 0.6.1.
 2017-10-19 00:16:50 +02:00
Marius Bakke 0098b95064
gnu: python-pyflakes: Update to 1.5.0. 
* gnu/packages/python.scm (python-pyflakes): Update to 1.5.0.
 2017-10-19 00:16:50 +02:00
Marius Bakke f2ef961e59
gnu: python-pytest: Update to 3.2.3. 
* gnu/packages/python.scm (python-pytest): Update to 3.2.3.
[native-inputs]: Add PYTHON-SETUPTOOLS-SCM.
(python-pytest)[native-inputs]: Likewise.
(python2-pytest)[native-inputs]: Remove PYTHON2-ENUM34.
 2017-10-19 00:16:50 +02:00
Marius Bakke cf659519c9
gnu: python-setuptools-scm: Update to 1.15.6. 
* gnu/packages/python.scm (python-setuptools-scm): Update to 1.15.6.
 2017-10-19 00:16:50 +02:00
Marius Bakke 92b2101a56
gnu: python-pytest: Add a minimal variant for bootstrapping. 
* gnu/packages/python.scm (python-pytest-bootstrap, python2-pytest-bootstrap):
New variables.
(python-six, python-hypothesis, python-pytest-runner,
python-mccabe)[native-inputs]: Use PYTHON-PYTEST-BOOTSTRAP instead of
PYTHON-PYTEST.
 2017-10-19 00:16:50 +02:00
Marius Bakke 928da609b5
gnu: Remove python-pytest@2. 
* gnu/packages/python.scm (python-pytest): Update to 3.0.7.
[source]: Move substitution to ...
[arguments]: ... here. Incorporate phase from pytest-3.0.
[native-inputs]: Add PYTHON-HYPOTHESIS.
(python-pytest-3.0): Remove variable.
(python2-pytest-3.0): Rename to ...
(python2-pytest): ... this.
[native-inputs]: Add PYTHON2-ENUM34.
* gnu/packages/backup.scm (borg)[native-inputs]: Replace PYTHON-PYTEST-3.0
with PYTHON-PYTEST.
* gnu/packages/calendar.scm (khal): Likewise.
* gnu/packages/databases.scm (python-orator): Likewise.
* gnu/packages/python.scm (python-sphinx-1.6, python-sphinx-1.5.3,
python-pexpect, python-cryptography, python-pyopenssl, python-pytest-warnings,
python-pytest-capturelog, python-pytest-catchlog, python-marshmallow,
python-apispec, python-flasgger, python-pyjwt, python-grako,
python-honcho): Likewise.
* gnu/packages/web.scm (python-internetarchive): Likewise.
 2017-10-19 00:16:49 +02:00
Marius Bakke 8ed675a77f
gnu: python-six: Update to 1.11.0. 
* gnu/packages/python.scm (python-six): Update to 1.11.0.
 2017-10-19 00:16:49 +02:00
Marius Bakke 8dd339e5a6
gnu: python-six: Really enable tests. 
* gnu/packages/python.scm (python-six)[arguments]: Override 'check' phase.
 2017-10-19 00:16:49 +02:00
Marius Bakke 220b0ac38e
gnu: python-py: Update to 1.4.34. 
* gnu/packages/python.scm (python-py, python2-py): Update to 1.4.34.
 2017-10-19 00:16:49 +02:00
Marius Bakke b18226c3a1
gnu: python@3: Update to 3.6.3. 
* gnu/packages/patches/python-3.5-fix-tests.patch: Rename to ...
* gnu/packages/patches/python-3-fix-tests.patch: ... this. Adjust and disable
more tests.
* gnu/packages/patches/python-3.5-getentropy-on-old-kernels.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python.scm (python-2.7)[argument]: Patch '/bin/sh' in one more file.
(python-3.5): Rename to ...
(python-3.6): ... this. Update to 3.6.3.
[source](patches): Remove obsolete patch, adjust to patch rename.
(python-3): Use PYTHON-3.6.
 2017-10-19 00:16:49 +02:00
Marius Bakke 603a64920f
gnu: python@2: Update to 2.7.14. 
* gnu/packages/python.scm (python-2.7): Update to 2.7.14.
[source]: Add patch to skip two new tests.  Delete upstreamed patch.
* gnu/packages/patches/python-2.7-adjust-tests.patch: New file.
* gnu/packages/patches/python-2.7-getentropy-on-old-kernels.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2017-10-19 00:16:49 +02:00
Roel Janssen 357ab93aac
gnu: Add python2-py2neo. 
* gnu/packages/python.scm (python2-py2neo): New variable.
 2017-10-17 09:59:35 +02:00
Roel Janssen 4640a11bee
gnu: Add python2-neo4j-driver. 
* gnu/packages/python.scm (python2-neo4j-driver): New variable.
 2017-10-17 09:59:06 +02:00
Thomas Danckaert 8cff2e7aed
Merge 'master' into core-updates 2017-10-16 19:52:30 +02:00
Efraim Flashner 0751fddd91
gnu: python-cffi: Move to libffi.scm 
* gnu/packages/python.scm (python-cffi): Move from here ...
* gnu/packages/libffi.scm: ... to here.
* gnu/packages/crypto.scm, gnu/packages/password-utils.scm: Adjust
module imports.
 2017-10-15 11:57:15 +03:00
Efraim Flashner cca55d571c
gnu: python-cffi: Update to 1.11.2. 
* gnu/packages/python.scm (python-cffi): Update to 1.11.2.
[home-page]: Use 'https'.
 2017-10-15 11:57:15 +03:00
Efraim Flashner a1add5b7fb
gnu: python-cffi: Disable test that fails on aarch64. 
* gnu/packages/python.cm (python-cffi)[arguments]: Disable test that
is known to fail on aarch64.
 2017-10-15 11:57:15 +03:00
ng0 b35936880d
gnu: Add python-pyqrcode. 
* gnu/packages/python.scm (python-pyqrcode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:37 +02:00
ng0 a4593cc95b
gnu: python-fonttools: Update to 3.15.1. 
* gnu/packages/python.scm (python-fonttools): Update to 3.15.1.
  (source)[uri]: Use 'pypi-uri'.
  (native-inputs): Add unzip.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2017-10-14 07:18:19 +01:00
Efraim Flashner e37415917c
gnu: python-psycopg2: Update to 2.7.3.1. 
* gnu/packages/python.scm (python-psycopg2): Update to 2.7.3.1.
[inputs]: Replace postgresql@9.6 with postgresql.
 2017-10-13 00:00:42 +03:00
Efraim Flashner 4e169fc67a
gnu: python-psycopg2: Use postgresql@9.6. 
* gnu/packages/python.scm (python-psycopg2)[inputs]: Replace postgresql
with postgresql@9.6.
 2017-10-12 23:39:36 +03:00
Christopher Baines ee8aab1f8d
gnu: Add python-jupyter-console as input to python-ipython. 
This fixes running ipython console and ipython3 console, as the
jupyter_console package is missing.

As python-ipython is an input to python-jupyter-console, use a modified
version of the package which doesn't have this input.

* gnu/packages/python.scm (python-jupyter-console-minimal): New variable.
  (python-ipython)[propagated-inputs]: Replace python-jupyter-console with
  python-jupyter-console-minimal.
 2017-10-12 20:23:25 +01:00
Ricardo Wurmus 22d1060eff
gnu: python-rpy2: Ignore test results. 
* gnu/packages/python.scm (python-rpy2)[arguments]: Ignore test failures.
 2017-10-11 11:06:05 +02:00
Troy Sankey c1578ad063
gnu: python-twisted: Update to 17.1.0. 
* gnu/packages/python.scm (python-twisted): Update to 17.1.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:41 +02:00
Troy Sankey 0cd83b4e00
gnu: Add python-incremental. 
* gnu/packages/python.scm (python-incremental, python2-incremental): New
variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:41 +02:00
Troy Sankey 96cb5ca1f2
gnu: Add python-automat. 
* gnu/packages/python.scm (python-automat, python2-automat): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:41 +02:00
Troy Sankey fd8ff99aa7
gnu: Add python-m2r. 
* gnu/packages/python.scm (python-m2r, python2-m2r): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:40 +02:00
Troy Sankey 9074bac139
gnu: Add python-constantly. 
* gnu/packages/python.scm (python-constantly, python2-constantly): New
variables.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:40 +02:00
Troy Sankey bb3b4b4ee9
gnu: Add python-attrs. 
* gnu/packages/python.scm (python-attrs, python2-attrs): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:40 +02:00
Marius Bakke c01ef97594
Merge branch 'master' into core-updates 2017-10-10 22:33:28 +02:00
Marius Bakke 1c055d7258
Merge branch 'staging' 2017-10-10 21:44:32 +02:00
Cyril Roelandt 4792a0321a
gnu: python2-unittest2: Update to 1.1.0. 
* gnu/packages/python.scm (python2-unittest2): Update to 1.1.0.
* gnu/packages/patches/python2-unittest2-remove-argparse.patch: New file.
* gnu/local.mk: Add it.
 2017-10-10 02:36:35 +02:00
Cyril Roelandt 1898eaa335
gnu: Add python-traceback2. 
* gnu/packages/python.scm (python-traceback2, python2-traceback2): New
  variables.
 2017-10-10 02:36:35 +02:00
Cyril Roelandt ab28aa229b
gnu: Add python-linecache2. 
* gnu/packages/python.scm (python-linecache2, python2-linecache2): New
  variables.
 2017-10-10 02:36:34 +02:00
Cyril Roelandt 576c0e29cd
gnu: python-netaddr: Fix the source URL. 
* gnu/packages/python.scm (python-netaddr, python2-netaddr): Fix the source URL.
 2017-10-10 02:36:34 +02:00
Cyril Roelandt cb95e5e50e
gnu: Add python2-aniso8601. 
* gnu/packages/python.scm (python2-aniso8601): New variable.
 2017-10-10 02:35:44 +02:00
Cyril Roelandt 64791fae63
gnu: python-aniso8601: Update to 1.3.0. 
* gnu/packages/python.scm (python-aniso8601, python2-aniso8601): Update to 1.3.0.
 2017-10-10 02:35:43 +02:00
Cyril Roelandt 96d63eead2
gnu: python-alembic: Update to 0.9.5. 
* gnu/packages/python.scm (python-alembic, python2-alembic): Update to 0.9.5.
 2017-10-10 02:35:43 +02:00
Cyril Roelandt 79cb661fc7
gnu: python-arrow: Update to 0.10.0. 
* gnu/packages/python.scm (python-arrow, python2-arrow): Update to 0.10.0.
 2017-10-10 02:35:43 +02:00
Cyril Roelandt a9769a290f
gnu: python-apispec: Update to 0.25.3. 
* gnu/packages/python.scm (python-apispec, python2-apispec): Update to 0.25.3.
 2017-10-10 02:35:41 +02:00
Leo Famulari d7eb680d85
gnu: Add python-guzzle-sphinx-theme. 
* gnu/packages/python.scm (python-guzzle-sphinx-theme,
python2-guzzle-sphinx-theme): New variables.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-10-08 13:36:20 -04:00
Tomáš Čech 3eabcc7878
gnu: Add missing input to python-py3status and fix call path. 
file is used to determine configuration file encoding and py3status fails to
start when this tool is missing.

* gnu/packages/python.scm (python-py3status)[inputs]: Add file.
  [arguments]: Modify phases to patch py3status to call file with an absolute
  path.
 2017-10-08 13:03:07 +02:00
Marius Bakke 6a317919cf
Merge branch 'master' into staging 2017-10-06 11:03:27 +02:00
Ricardo Wurmus 67a08f1809
gnu: Add python-numpy-next. 
* gnu/packages/python.scm (python-numpy-next, python2-numpy-next): New
variables.
 2017-10-05 12:04:32 +02:00
Ricardo Wurmus eaa1db1de6
Revert "gnu: python-numpy: Update to 1.13.1." 
This reverts commit 025b196d9b.

This is necessary as neither the current release nor the latest development
version of python-pandas can be build with numpy 1.13.x.
 2017-10-05 12:04:32 +02:00
Marius Bakke 7716ccd59c
Merge branch 'master' into staging 2017-10-05 00:45:38 +02:00
Ricardo Wurmus cb91edebda
gnu: python-numexpr: Update to 2.6.4. 
* gnu/packages/python.scm (python-numexpr): Update to 2.6.4.
 2017-10-04 15:19:52 +02:00
Thomas Danckaert 1033cdbb0c
gnu: python-numpy: Give sh store location instead of setting $SHELL. 
* gnu/packages/python.scm (python-numpy): [arguments] Don't set $SHELL in the
  environment, but embed the store location of bash-minimal as a default
  shell.  Otherwise, we have to set $SHELL for every package which uses
  numpy's distutils.
 2017-10-04 14:09:52 +02:00
David Thompson 7e2c67ca6a
gnu: awscli: Update to 1.11.164. 
* gnu/packages/python.scm (awscli): Update to 1.11.164.
 2017-10-03 20:34:28 -04:00
Cyril Roelandt 3ef85c1118
gnu: Add python-twine. 
* gnu/packages/python.scm (python-twine, python2-twine): New variables.
 2017-10-03 00:04:36 +02:00
Cyril Roelandt 78f46e65bd
gnu: Add python-pkginfo. 
* gnu/packages/python.scm (python-pkginfo, python2-pkginfo): New variables.
 2017-10-03 00:04:36 +02:00
Cyril Roelandt b84ef9e224
gnu: Add python-tqdm. 
* gnu/packages/python.scm (python-tqdm, python2-tqdm): New variables.
 2017-10-03 00:04:35 +02:00
Cyril Roelandt cf47e34e62
gnu: Update the propagated inputs of python-urllib3. 
* gnu/packages/python.scm (python-urllib3, python2-urllib3): Update propagated
  inputs.
 2017-10-03 00:04:34 +02:00
Cyril Roelandt 8e6ceb4737
gnu: Add python-nose-timer. 
* gnu/packages/python.scm (python-nose-time, python2-nose-timer): New variables.
 2017-10-03 00:04:33 +02:00
Cyril Roelandt 9bb7c05e3d
gnu: python-tox: Update to 2.8.1. 
* gnu/packages/python.scm (python-tox): Update to 2.8.1.
 2017-10-03 00:04:32 +02:00
Cyril Roelandt 74e9895f2d
gnu: Add python2-requests-toolbelt. 
* gnu/packages/python.scm (python2-requests-toolbelt): New variable.
 2017-10-03 00:04:32 +02:00
Cyril Roelandt 30d7207f2e
gnu: python-requests-toolbelt: Update to 0.8.0. 
* gnu/packages/python.scm (python-requests-toolbelt): Udpate to 0.8.0.
 2017-10-03 00:04:31 +02:00
Cyril Roelandt 8e483fb540
gnu: python-autopep8: Update to 1.3.2. 
* gnu/packages/python.scm (python-autopep8): Update to 1.3.2.
 2017-10-03 00:04:30 +02:00
Cyril Roelandt ab7f51fa34
gnu: Add python-pydiff. 
* gnu/packages/python.scm (python-pydiff, python2-pydiff): New variables.
 2017-10-03 00:04:29 +02:00
Efraim Flashner 64df08f0cf
Merge remote-tracking branch 'origin/master' into core-updates 2017-10-01 22:16:22 +03:00
Thomas Danckaert 80c3f4d6c0
gnu: python-ipython: Update to 5.3.0. 
* gnu/packages/python.scm (python-ipython, python2-ipython): Update to 5.3.0.
 2017-09-28 20:24:25 +02:00
Thomas Danckaert 025b196d9b
gnu: python-numpy: Update to 1.13.1. 
* gnu/packages/python.scm (python-numpy, python2-numpy): Update to 1.13.1.
[source]: Download the zip release from pypi instead of a git snapshot.
[native-inputs]: Add unzip.
[arguments]: Set SHELL environment variable.

Co-authored by Leo Famulari <leo@famulari.name>
 2017-09-28 20:24:25 +02:00
Marius Bakke ffcff27272
Merge branch 'master' into staging 2017-09-24 19:18:35 +02:00
Efraim Flashner 58816c3d3d
gnu: python-cython: Update to 0.27. 
* gnu/packages/python.scm (python-cython): Update to 0.27.
 2017-09-24 16:41:30 +03:00
Tobias Geerinckx-Rice a0b80a5718
gnu: python-unidecode: Fix typo in description. 
* gnu/packages/python.scm (python-unidecode)[description]: Fix typo.
 2017-09-23 14:12:52 +02:00
Tobias Geerinckx-Rice c37f58b75a
gnu: python-unidecode: Update to 0.04.21. 
* gnu/packages/python.scm (python-unidecode): Update to 0.04.21.
 2017-09-23 14:12:51 +02:00
Kei Kebreau dc1d3cdef7
gnu: Use 'modify-phases' syntax. 
* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal,
wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use
'modify-phases' syntax.
* gnu/packages/algebra.scm (arb)[arguments]: Likewise.
* gnu/packages/apr.scm (apr-util)[arguments]: Likewise.
* gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano,
lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound,
zita-convolver, zita-alsa-pcmi)[arguments]: Likewise.
* gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express,
flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise.
* gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise.
* gnu/packages/compression.scm (sharutils)[arguments]: Likewise.
* gnu/packages/conky.scm (conky)[arguments]: Likewise.
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise.
* gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise.
* gnu/packages/display-managers.scm (slim)[arguments]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise.
* gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise.
* gnu/packages/engineering.scm (pcb)[arguments]: Likewise.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise.
* gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise.
* gnu/packages/fltk.scm (fltk)[arguments]: Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise.
* gnu/packages/gd.scm (perl-gd)[arguments]: Likewise.
* gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise.
* gnu/packages/glib.scm (glibmm)[arguments]: Likewise.
* gnu/packages/gl.scm (glew)[arguments]: Likewise.
* gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs,
libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise.
* gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise.
* gnu/packages/graphics.scm (agg)[arguments]: Likewise.
* gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present,
python2-pycairo)[arguments]: Likewise.
* gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise.
* gnu/packages/hugs.scm (hugs)[arguments]: Likewise.
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal)
[arguments]: Likewise.
* gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise.
* gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static,
lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools)
[arguments]: Likewise.
* gnu/packages/lisp.scm (ccl)[arguments]: Likewise.
* gnu/packages/lout.scm (lout)[arguments]: Likewise.
* gnu/packages/lua.scm (luajit)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise.
* gnu/packages/mail.scm (exim)[arguments]: Likewise.
* gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise.
* gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun)
[arguments]: Likewise.
* gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise.
* gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise.
* gnu/packages/music.scm (solfege)[arguments]: Likewise.
* gnu/packages/noweb.scm (noweb)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]:
Likewise.
* gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise.
* gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]:
Likewise.
* gnu/packages/photo.scm (gphoto2)[arguments]: Likewise.
* gnu/packages/popt.scm (popt)[arguments]: Likewise.
* gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]:
Likewise.
* gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise.
* gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy,
python-sqlalchemy, python-docopt)[arguments]: Likewise.
* gnu/packages/rdf.scm (lrdf)[arguments]: Likewise.
* gnu/packages/regex.scm (tre)[arguments]: Likewise.
* gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise.
* gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise.
* gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise.
* gnu/packages/scheme.scm (racket)[arguments]: Likewise.
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise.
* gnu/packages/serveez.scm (serveez)[arguments]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise.
* gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise.
* gnu/packages/tcl.scm (expect)[arguments]: Likewise.
* gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise.
* gnu/packages/textutils.scm (recode, libgtextutils)[arguments]:
Likewise.
* gnu/packages/time.scm (time)[arguments]: Likewise.
* gnu/packages/tor.scm (privoxy)[arguments]: Likewise.
* gnu/packages/uucp.scm (uucp)[arguments]: Likewise.
* gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise.
* gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
* gnu/packages/wicd.scm (wicd)[arguments]: Likewise.
* gnu/packages/wm.scm (bspwm)[arguments]: Likewise.
* gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise.
* gnu/packages/xfce.scm (xfconf)[arguments]: Likewise.
* gnu/packages/xfig.scm (transfig)[arguments]: Likewise.
* gnu/packages/xorg.scm (imake)[arguments]: Likewise.
 2017-09-20 20:58:04 -04:00
Marius Bakke ad0f92d028
gnu: python-pyjwt: Update to 1.5.3. 
* gnu/packages/python.scm (python-pyjwt): Update to 1.5.3.
 2017-09-20 17:06:14 +02:00
Marius Bakke 0c19c0f272
gnu: python-pyopenssl: Update to 17.3.0. 
* gnu/packages/python.scm (python-pyopenssl): Update to 17.3.0.
 2017-09-17 17:14:13 +02:00
Ben Woodcroft da1f7a9e16
gnu: python-orator: Move to (gnu packages databases). 
* gnu/packages/python.scm: Remove (gnu packages time) import.
(python-orator, python2-orator): Move from here ...
* gnu/packages/databases.scm: ... to here.
 2017-09-17 11:07:46 +10:00
Ben Woodcroft 77e5c37032
gnu: python-orator: Update to 0.9.7. 
* gnu/packages/python.scm (python-orator, python2-orator): Update to 0.9.7.
[arguments]: Enable tests.  Loosen dependency requirements.
[propagated-inputs]: Remove python-arrow.  Add python-backpack,
python-pendulum, python-pygments, python-six.
(python2-orator)[propagated-inputs]: Also remove python2-ipaddress.
 2017-09-17 11:05:33 +10:00
Ben Woodcroft 00c7888241
gnu: python-pygments: Update to 2.2.0. 
* gnu/packages/databases.scm (python-pygments): Update to 2.2.0.
 2017-09-17 11:05:29 +10:00
Ben Woodcroft 5eebe8dcf7
gnu: python-cleo: Update to 0.6.1. 
* gnu/packages/databases.scm (python-cleo): Update to 0.6.1.
[native-inputs]: Add python-pytest-mock.
[propagated-inputs]: Add python-backpack, python-pastel.  Remove
python-psutil.
 2017-09-17 11:05:17 +10:00
Ben Woodcroft 963926bc78
gnu: python-pyaml: Update to 17.7.2. 
* gnu/packages/databases.scm (python-pyaml): Update to 17.7.2.
 2017-09-17 11:03:51 +10:00
Ben Woodcroft 04fb4516f4
gnu: Add python-backpack. 
* gnu/packages/python.scm (python-backpack): New variable.
 2017-09-17 11:00:56 +10:00
Stefan Reichör 24d158136f
gnu: Add python-schedule. 
* gnu/packages/python.scm (python-schedule, python2-schedule): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-15 18:31:53 +02:00
Tobias Geerinckx-Rice 3f9a4eaf92
gnu: awscli: Update to 1.11.151. 
* gnu/packages/python.scm (awscli): Update to 1.11.151.
 2017-09-13 04:30:32 +02:00
Tobias Geerinckx-Rice 46841c07ec
gnu: python-s3transfer: Update to 0.1.11. 
* gnu/packages/python.scm (python-s3transfer): Update to 0.1.11.
 2017-09-13 04:30:32 +02:00
Tobias Geerinckx-Rice 01fc102e37
gnu: python-botocore: Update to 1.7.9. 
* gnu/packages/python.scm (python-botocore): Update to 1.7.9.
 2017-09-13 04:30:31 +02:00
Jelle Licht b83ad3ace5
gnu: python-apsw: Update to 3.20.1-r1. 
* gnu/packages/python.scm (python-apsw): Update to 3.20.1-r1.
[origin]: Change to updated upstream url.
 2017-09-12 00:09:27 +02:00
Jelle Licht cfd34f4316
gnu: python-apsw: Build with all extensions. 
* gnu/packages/python.scm (python-apsw)[phases]: Replace build phase; add flag
  to build all extensions. Add build-test-helper to allow testing of
  extensions.
 2017-09-11 01:12:59 +02:00
Oleg Pykhalov 1eb6b72483
gnu: Add python-betamax-matchers. 
* gnu/packages/python.scm (python-betamax-matchers, python2-betamax-matchers):
  New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-08 18:12:51 +02:00
Oleg Pykhalov 4967946b8a
gnu: Add python-uritemplate. 
* gnu/packages/python.scm (python-uritemplate, python2-uritemplate): New
  variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-08 18:08:58 +02:00
Cyril Roelandt c98f9c5296
gnu: python-tox: Update to 2.8.0. 
* gnu/packages/python.scm (python-tox): Update to 2.8.0.
 2017-09-06 23:54:22 +02:00
Roel Janssen 13be557d98
gnu: Add python-html5-parser, python2-html5-parser. 
* gnu/packages/python.scm (python-html5-parser): New variable.
  (python2-html5-parser: New variable.
 2017-09-06 12:42:40 +02:00
Roel Janssen 2054b52201
gnu: Update python-lxml to 3.8.0. 
* gnu/packages/python.scm (python-lxml): Update to 3.8.0.
 2017-09-06 12:41:41 +02:00
Muriithi Frederick Muriuki 2038a48f4d
gnu: Add python-xenon. 
* gnu/packages/python.scm (python-xenon, python2-xenon) New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-02 00:58:11 +02:00
Leo Famulari 3a91ac8378
gnu: python-click-log: Update to 0.2.0. 
* gnu/packages/python.scm (python-click-log): Update to 0.2.0.
 2017-09-01 13:54:23 -04:00
Leo Famulari 19ecdbedd3
gnu: python-click-threading: Update to 0.4.3. 
* gnu/packages/python.scm (python-click-threading): Update to 0.4.3.
[source]: Use pypi-uri.
 2017-09-01 13:54:20 -04:00
Leo Famulari 2da21e48a8
gnu: python-icalendar: Update to 3.11.7. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.7.
 2017-09-01 13:41:39 -04:00
Arun Isaac a0596a2f27
gnu: python2-larch: Enable tests. 
* gnu/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python2-larch)[source]: Use it.
[arguments]: Move 'check' phase to before 'build' phase.
 2017-09-01 11:14:16 +05:30
Arun Isaac f618086220
gnu: python2-ttystatus: Enable tests. 
* gnu/packages/python.scm (python2-ttystatus)[arguments]: Replace 'check'
phase with custom function.
 2017-09-01 11:14:16 +05:30
Arun Isaac 689042e526
gnu: python2-cliapp: Enable tests. 
* gnu/packages/python.scm (python2-cliapp)[arguments]: Replace 'check' phase
with custom function.
 2017-09-01 11:14:16 +05:30
Ricardo Wurmus 59ff96aafd
gnu: Remove python2-rpy2. 
Python 2 is no longer supported.

* gnu/packages/python.scm (python2-rpy2): Remove variable.
 2017-08-31 18:24:52 +02:00
Ricardo Wurmus deee5ddaf4
gnu: python-rpy2: Update to 2.9.0. 
* gnu/packages/python.scm (python-rpy2): Update to 2.9.0.
[arguments]: Run tests before install phase; add build phase "fix-tests".
[propagated-inputs]: Add python-jinja2 and python-pytz.
[inputs]: Add r-ggplot2, r-rsqlite, r-dplyr, r-dbplyr, and python-numpy.
 2017-08-31 18:24:51 +02:00
Ricardo Wurmus c92483bd63
gnu: python-rpy2: Update license. 
* gnu/packages/python.scm (python-rpy2)[license]: Correct GPLv3+ to GPLv2+;
list additional licenses.
 2017-08-31 18:24:51 +02:00
Marius Bakke 7e31427ff0
gnu: python-pyjwt: Update to 1.5.2 [fixes CVE-2017-11424]. 
* gnu/packages/python.scm (python-pyjwt): Update to 1.5.2.
[source]: Add snippet to remove pre-compiled files.
[native-inputs]: Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
 2017-08-31 15:45:43 +02:00
Ricardo Wurmus 4a7d2009c8
gnu: Add python-spectra. 
* gnu/packages/python.scm (python-spectra, python2-spectra): New variables.
 2017-08-30 17:32:00 +02:00
Ricardo Wurmus beed6abc1d
gnu: Add python-colormath. 
* gnu/packages/python.scm (python-colormath, python2-colormath): New
variables.
 2017-08-30 17:31:59 +02:00
Ricardo Wurmus bac5fd21a1
gnu: python-jinja2: Update to 2.9.6. 
* gnu/packages/python.scm (python-jinja2): Update to 2.9.6.
[arguments]: Add build phase "delete-incompatible-files".
 2017-08-30 17:31:59 +02:00
Carlo Zancanaro 7a276cd945
gnu: Add python-pyaes. 
* gnu/packages/python.scm (python-pyaes, python2-pyaes): New variables.
 2017-08-30 09:20:52 +02:00
Carlo Zancanaro 07e62ae1c2
gnu: Add python-pysocks. 
* gnu/packages/python.scm (python-pysocks, python2-pysocks): New variables.
 2017-08-30 09:20:45 +02:00
Kei Kebreau 3c8ba11a97
Update e-mail for Kei Kebreau. 
* .mailmap: Map kei@openmailbox.org to current address.
* gnu/local.mk: Replace kei@openmailbox.org to current address.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/calendar.scm: Likewise.
* gnu/packages/check.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/emacs.scm: Likewise.
* gnu/packages/fltk.scm: Likewise.
* gnu/packages/freedesktop.scm: Likewise.
* gnu/packages/game-development.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/gnustep.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/hexedit.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/xfce.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/textutils.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/web-browsers.scm: Likewise.
* gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: Likewise.
 2017-08-29 20:13:24 -04:00
Leo Famulari 5f13bf0972
gnu: Fetch several Git sources over HTTPS. 
* gnu/packages/admin.scm (interrobang)[source]: Use HTTPS URL.
* gnu/packages/audio.scm (ardour)[source]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[source]: Likewise.
* gnu/packages/gnome.scm (byzanz)[source]: Likewise.
* gnu/packages/gnunet.scm (guile-gnunet)[source]Likewise.
* gnu/packages/java.scm (classpath)[source]: Likewise.
* gnu/packages/microcom.scm (microcom)[source]: Likewise.
* gnu/packages/python.scm (python-axolotl-curve25519)[source]: Likewise.
* gnu/packages/rdesktop.scm (freerdp)[source]: Likewise.
* gnu/packages/shells.scm (rc)[source]: Likewise.
* gnu/packages/web.scm (libwebsockets)[source]: Use new source URL.
 2017-08-27 18:24:49 -04:00
Marius Bakke 72e2815d18
Merge branch 'core-updates' 2017-08-26 15:15:49 +02:00
Stefan Reichör 84342e2fa9
gnu: Add honcho. 
* gnu/packages/python.scm (python-honcho, python2-honcho): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-24 21:27:23 +02:00
Arun Isaac 2d6da7942a
gnu: python2-ttystatus: Update to 0.35. 
* gnu/packages/python.scm (python2-ttystatus): Update to 0.35.
 2017-08-24 14:28:41 +05:30
Arun Isaac f6c5821530
gnu: cliapp: Update to 1.20170823. 
* gnu/packages/python.scm (python2-cliapp): Update to 1.20170823.
 2017-08-24 14:20:45 +05:30
Ricardo Wurmus d7eea7d7ae
gnu: python-scikit-learn: Update to 0.19.0. 
* gnu/packages/python.scm (python-scikit-learn): Update to 0.19.0.
 2017-08-23 17:31:54 +02:00
Thomas Danckaert 1206c95a49
gnu: python-netcdf4: Update to 1.2.9. 
* gnu/packages/python.scm (python-netcdf4): Update to 1.2.9.
 2017-08-22 09:02:32 +02:00
Thomas Danckaert 5c78db6222
gnu: python-h5py: Update to 2.7.0. 
* gnu/packages/python.scm (python-h5py): Update to 2.7.0.
 2017-08-22 09:02:24 +02:00
Tobias Geerinckx-Rice 58f3d45996
gnu: python-marshmallow: Update to 3.0.0b3. 
* gnu/packages/python.scm (python-marshmallow): Update to 3.0.0b3.
 2017-08-21 22:54:38 +02:00
Marius Bakke 2718a9cd09
Merge branch 'master' into core-updates 2017-08-21 02:40:37 +02:00
Tobias Geerinckx-Rice e121be1e15
gnu: python-netaddr: Update to 0.7.19. 
* gnu/packages/python.scm (python-netaddr): Update to 0.7.19.
 2017-08-19 02:17:43 +02:00
Marius Bakke 8c0c0c4def
gnu: python-pygit2: Update to 0.26.0. 
* gnu/packages/python.scm (python-pygit2): Update to 0.26.0.
* gnu/packages/patches/python-pygit2-disable-network-tests.patch: Skip one
more test. Use unittest.skipIf instead of deleting sections.
 2017-08-18 21:33:31 +02:00
Efraim Flashner e3b861ce38
gnu: python-cython: Update to 0.26. 
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.26.
[source]: Remove patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-17 06:46:06 +03:00
Tobias Geerinckx-Rice f73f1f0769
gnu: python-cryptography-vectors: Update to 2.0.3. 
* gnu/packages/python.scm (python-cryptography-vectors): Update to 2.0.3.
 2017-08-16 22:35:11 +02:00
Tobias Geerinckx-Rice f37995fa20
gnu: python-cryptography: Update to 2.0.3. 
* gnu/packages/python.scm (python-cryptography): Update to 2.0.3.
 2017-08-16 22:35:10 +02:00
Mark H Weaver 09ec5a0f0c
Merge branch 'master' into core-updates 2017-08-15 03:10:14 -04:00
Danny Milosavljevic 462ae6f612
gnu: python-pylint: Use Python2 variant system. 
* gnu/packages/python.scm (python-pylint): Use Python2 variant system.
(python2-pylint): Strip Python2 variant system.
 2017-08-12 16:30:16 +02:00
Mark H Weaver 3785e42e52
Merge branch 'master' into core-updates 2017-08-11 03:49:24 -04:00
Christopher Baines c795bc79d9
gnu: Add python-tornado-http-auth. 
* gnu/packages/python.scm (python-tornado-http-auth): New variable.
 2017-08-09 23:50:10 +01:00
Mark H Weaver cc294bcee6
Merge branch 'master' into core-updates 2017-08-09 17:25:31 -04:00
Leo Famulari ae7f246cf1
gnu: python-nbformat: Update to 4.3.0. 
* gnu/packages/python.scm (python-nbformat, python2-nbformat): Update to 4.3.0.
 2017-08-09 16:52:51 -04:00
Mark H Weaver 2d9495da23
Merge branch 'master' into core-updates 2017-08-07 16:45:16 -04:00
Leo Famulari fd8f946379
gnu: python-icalendar: Update to 3.11.6. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.6.
 2017-08-06 16:58:02 -04:00
Danny Milosavljevic 18c6a7b4c8
gnu: Add python-flask-httpauth. 
* gnu/packages/python.scm (python-flask-httpauth, python2-flask-httpauth):
New variables.
 2017-08-06 13:35:07 +02:00
Mark H Weaver f167595ba1
Merge branch 'master' into core-updates 2017-08-06 00:23:20 -04:00
Ludovic Courtès 240d3ceff7
gnu: python-argcomplete: Add dependency on the full Bash. 
Fixes a regression introduced in
704243e0c6.

* gnu/packages/python.scm (python-argcomplete)[native-inputs]: Add BASH.
 2017-08-05 00:31:26 +02:00
Thomas Danckaert a70b03d413
gnu: Add python-grako 
* gnu/packages/python.scm (python-grako): New variable.
 2017-08-02 14:08:33 +02:00
Marius Bakke aa9780daf9
Merge branch 'master' into core-updates 2017-08-01 23:42:28 +02:00
Muriithi Frederick Muriuki 269504a797
gnu: python-pbr-minimal: Update to 3.0.1 
* gnu/packages/python.scm (python-pbr-minimal): Update to 3.0.1
[source]: Update hash and remove patch.
* gnu/packages/patches/python-pbr-fix-man-page-support.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-08-01 15:21:52 +03:00
Marius Bakke e0b9e377f1
Merge branch 'master' into core-updates 2017-07-28 00:34:13 +02:00
Marius Bakke 90335ccea6
gnu: python-cryptography: Update to 2.0.2. 
* gnu/packages/python.scm (python-cryptography-vectors, python-cryptography):
Update to 2.0.2.
 2017-07-27 22:15:26 +02:00
Danny Milosavljevic 9ea61b1c6f
gnu: Add python-flask-principal. 
* gnu/packages/python.scm (python-flask-principal, python2-flask-principal):
New variables.
 2017-07-26 21:52:30 +02:00
Kei Kebreau 4fdab17371
gnu: python2-urwid: Actually build urwid for Python 2. 
* gnu/packages/python.scm (python2-urwid)[arguments]: Add #:python.
 2017-07-25 15:29:29 -04:00
Ludovic Courtès dc4f697f01
gnu: python-pexpect: Add dependency on the full Bash. 
Fixes a regression introduced in
704243e0c6.

* gnu/packages/python.scm (python-pexpect)[native-inputs]: Add BASH.
 2017-07-24 17:24:17 +02:00
Ludovic Courtès f1ddfe4f14
gnu: python-flaky: Fix Texinfo markup in description. 
* gnu/packages/python.scm (python-flaky)[description]: Escape "@".
 2017-07-24 12:05:53 +02:00
Leo Famulari e081e2dd0b
Merge branch 'master' into core-updates 2017-07-23 19:06:49 -04:00
Marius Bakke 09efef3384
gnu: python-scipy: Update to 0.19.1. 
* gnu/packages/python.scm (python-scipy): Update to 0.19.1.
[source]: Use 'pypi-uri'.
 2017-07-23 22:01:28 +02:00
Marius Bakke 71d20587a5
gnu: python-matplotlib: Update to 2.0.2. 
* gnu/packages/python.scm (python-matplotlib): Update to 2.0.2.
[source]: Use 'pypi-uri'.
 2017-07-23 22:01:28 +02:00
Marius Bakke 9e5ee6b60c
gnu: python-pyparsing: Update to 2.2.0. 
* gnu/packages/python.scm (python-pyparsing, python2-pyparsing): Update to
2.2.0.
 2017-07-23 22:01:27 +02:00
Marius Bakke 007176e710
gnu: python-pyparsing: Use 'modify-phases' syntax. 
* gnu/packages/python.scm (python-pyparsing)[arguments]<#:phases>: Use
'modify-phases'.
 2017-07-23 22:01:27 +02:00
Leo Famulari 6c1a317e29
Merge branch 'master' into core-updates 2017-07-23 03:42:12 -04:00
Marius Bakke c799eb2eb8
gnu: Remove python-fake-factory. 
Superseded by python-faker since ce7911ddae.

* gnu/packages/python.scm (python-fake-factory, python2-fake-factory):
Remove variables.
 2017-07-22 14:31:28 +02:00
Marius Bakke 2580c2f07f
gnu: python-pyopenssl: Update to 17.2.0. 
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0.
[native-inputs]: Add PYTHON-FLAKY.
[source](patches): Remove.
 2017-07-22 14:31:28 +02:00
Marius Bakke 4e52739c61
gnu: Add python-flaky. 
* gnu/packages/python.scm (python-flaky, python2-flaky): New variables.
 2017-07-22 14:31:27 +02:00
Muriithi Frederick Muriuki 1f84ff5135
gnu: Add python-clyent. 
* gnu/packages/python.scm (python-clyent, python2-clyent): New variables.
 2017-07-22 12:26:29 +02:00
Muriithi Frederick Muriuki 3fee003950
gnu: Update python-pytz to 2017.2. 
* gnu/packages/python.scm (python-pytz, python2-pytz): Update to 2017.2.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-07-22 12:26:29 +02:00
Ricardo Wurmus e7304ab18b
gnu: Add python-sphinx-1.6. 
* gnu/packages/python.scm (python-sphinx-1.6): New variable.
 2017-07-19 22:27:03 +02:00
Ricardo Wurmus 5f94ec913f
gnu: Add python-sphinxcontrib-websupport. 
* gnu/packages/python.scm (python-sphinxcontrib-websupport): New variable.
 2017-07-19 22:27:02 +02:00
Ricardo Wurmus 1fb9b6782b
gnu: snakemake: Update to 3.13.3. 
* gnu/packages/python.scm (snakemake): Update to 3.13.3.
 2017-07-19 14:39:37 +02:00
Ricardo Wurmus 8b89c1717c
gnu: python-numpy-documentation: Use texlive-union. 
* gnu/packages/python.scm (python-numpy-documentation)[native-inputs]: Replace
"texlive" with a texlive-union.
 2017-07-18 09:58:56 +02:00
Marius Bakke 27305769de
gnu: python-cryptograpy: Update to 2.0. 
* gnu/packages/python.scm (python-cryptography-vectors,
python2-cryptography-vectors, python-cryptography, python2-cryptography):
Update to 2.0.
 2017-07-18 01:31:10 +02:00
Ricardo Wurmus 2584beaedd
gnu: python-ipython: Use texlive-union. 
* gnu/packages/python.scm (python-ipython)[native-inputs]: Replace "texlive"
with a texlive-union.
 2017-07-17 14:01:46 +02:00
Danny Milosavljevic a12b30a05a
gnu: Add python-pytest-capturelog. 
* gnu/packages/python.scm (python-pytest-capturelog,
python2-pytest-capturelog): New variables.
 2017-07-15 11:46:18 +02:00
Oleg Pykhalov 841e59083d
gnu: Add python-jsonpatch. 
* gnu/packages/python.scm (python-jsonpatch, python2-jsonpatch,
python-jsonpatch-0.4, python2-jsonpatch-0.4): New variables.
 2017-07-15 10:51:34 +02:00
Oleg Pykhalov 4ff9e8685f
gnu: Add python-backports-csv. 
* gnu/packages/python.scm (python-backports-csv, python2-backports-csv):
New variables.
 2017-07-15 10:45:14 +02:00
Oleg Pykhalov 7734ed7af7
gnu: Add python-schema. 
* gnu/packages/python.scm (python-schema, python2-schema, python-schema-0.5,
python2-schema-0.5): New variables.
 2017-07-15 10:40:24 +02:00
Leo Famulari c8eb2b8c60
Merge branch 'master' into core-updates 2017-07-10 14:37:53 -04:00
Marius Bakke d28f90bed9
gnu: python-pyopenssl: Fix test failure on 32-bit platforms. 
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pyopenssl)[source]: Use it.
 2017-07-07 18:43:16 +02:00
Leo Famulari 642656a144
gnu: python-parsedatetime: Update to 2.4. 
* gnu/packages/python.scm (python-parsedatetime, python2-parsedatetime):
Update to 2.4.
 2017-07-07 01:23:12 -04:00
Leo Famulari 93013f1e79
gnu: python-icalendar: Update to 3.11.5. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.5.
 2017-07-07 01:23:08 -04:00
Marius Bakke a8a964db83
gnu: python-pylint: Update to 1.7.2. 
* gnu/packages/python.scm (python-pylint): Update to 1.7.2.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-PYTEST-RUNNER.
 2017-07-04 02:52:26 +02:00
Marius Bakke de2f56cf96
gnu: python-astroid: Update to 1.5.3. 
* gnu/packages/python.scm (python-astroid): Update to 1.5.3.
[properties]: Declare python2 variant.
(python2-astroid)[propagated-inputs]: Add PYTHON2-BACKPORTS-FUNCTOOLS-LRU-CACHE,
PYTHON2-ENUM34 and PYTHON2-SINGLEDISPATCH.
 2017-07-04 02:52:26 +02:00
Marius Bakke 96bbc41f8b
gnu: python-pyopenssl: Update to 17.1.0. 
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.1.0.
[source]: Remove patch.
[native-inputs]: Add PYTHON-PRETEND.
[arguments]<#:phases>: Disable the network test here instead of via a patch.
Also disable one new test.
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-04 02:52:26 +02:00
Marius Bakke 89fc5b82d4
gnu: python-cryptography: Update to 1.9. 
* gnu/packages/python.scm (python-cryptography-vectors): Update to 1.9.
(python-cryptography): Update to 1.9.
[propagated-inputs]: Remove PYTHON-PACKAGING.
 2017-07-04 02:52:25 +02:00
Marius Bakke 029933cf79
gnu: python-cffi: Update to 1.10.0. 
* gnu/packages/python.scm (python-cffi): Update to 1.10.0.
[arguments]<#:phases>: Patch distutils.ccompiler call to use "gcc". Patch
another hard-coded cc invocation. Adjust `py.test` invocation per README.
 2017-07-04 02:52:25 +02:00
Marius Bakke 295f32f34b
gnu: python-cffi: Really enable tests. 
* gnu/packages/python.scm (python-cffi, python2-cffi)[arguments]: Replace
'check' phase with custom expression. Change to 'modify-phases' syntax.
 2017-07-04 02:52:25 +02:00
Leo Famulari e00a59097e
gnu: python-vobject: Update to 0.9.5. 
* gnu/packages/python.scm (python-vobject, python2-vobject): Update to 0.9.5.
 2017-07-02 09:17:20 -04:00
Leo Famulari 1024c8119c
Merge branch 'master' into core-updates 2017-06-29 18:02:17 -04:00
Ricardo Wurmus e61bc976f6
gnu: snakemake: Fix cluster execution. 
* gnu/packages/python.scm (snakemake)[arguments]: Add build phase
"call-wrapper-not-wrapped-snakemake".
 2017-06-28 16:49:20 +02:00
Marius Bakke 60724d6975
gnu: python-pytest: Build with 'bash' instead of 'bash-final'. 
Addresses FTBFS after 704243e0c6.

* gnu/packages/python.scm (python-pytest)[native-inputs]: Add BASH.
(python-pytest-3.0)[native-inputs]: Inherit.
 2017-06-26 23:22:58 +02:00
Mark H Weaver ed068b960e
Merge branch 'master' into core-updates 2017-06-26 00:00:58 -04:00
Rutger Helling 7efd98be87
gnu: Add python-rencode. 
* gnu/packages/python.scm (python-rencode): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2017-06-23 14:16:44 +02:00
Rutger Helling f817b4d903
gnu: Add python2-pyopengl. 
* gnu/packages/python.scm (python2-pyopengl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-06-23 14:16:44 +02:00
Kei Kebreau fa56c7733d
gnu: Add python-uniseg. 
* gnu/packages/python.scm (python-uniseg, python2-uniseg): New
variables.
 2017-06-22 17:00:00 -04:00
Ricardo Wurmus d92621cf45
gnu: python-drmaa: Update source URL. 
* gnu/packages/python.scm (python-drmaa)[source]: Use pypi-uri.
 2017-06-22 08:54:44 +02:00
Tobias Geerinckx-Rice 9b8016612c
gnu: python-pycodestyle: Update to 2.3.1. 
* gnu/packages/python.scm (python-pycodestyle): Update to 2.3.1.
 2017-06-21 21:58:38 +02:00
Tobias Geerinckx-Rice 636437ec50
gnu: Remove unused python-flake8-2.2.4. 
* gnu/packages/python.scm (python-flake8-2.2.4): Remove variable.
 2017-06-21 21:58:37 +02:00
Tobias Geerinckx-Rice 5150d8b4b4
gnu: python-eventlet: Skip failing test phase. 
* gnu/packages/python.scm (python-eventlet)[arguments]: Disable tests.
 2017-06-21 21:58:37 +02:00
Tobias Geerinckx-Rice 0b84a530c8
gnu: python-vobject: Update to 0.9.4.1. 
* gnu/packages/python.scm (python-vobject): Update to 0.9.4.1.
 2017-06-21 21:58:37 +02:00
Roel Janssen fa3f5f472c
gnu: Add python-regex. 
* gnu/packages/python.scm (python-regex, python2-regex): New variables.
 2017-06-21 10:36:07 +02:00
Arun Isaac 148585c240
gnu: Move contents of zip module into compression module. 
* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to...
* gnu/packages/compression.scm: ...here.
* gnu/packages/zip.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file.
* po/packages/POTFILES.in: Unregister deleted file.
* gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression,
docbook, documentation, fonts, fpga, game-development, games, gl, gnome,
gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice,
markup, maths, mc, monitoring, music, php, pretty-print, python, scheme,
smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml,
zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm:
Adapt module import.
 2017-06-20 18:10:35 +05:30
Mark H Weaver 9815739e9b
Merge branch 'master' into core-updates 2017-06-20 00:25:59 -04:00
Leo Famulari 731b0c727c
gnu: Add python-mock-2. 
* gnu/packages/python.scm (python-mock-2): New variable.
 2017-06-19 13:07:20 -04:00
Efraim Flashner e46e957385
gnu: python: Skip one more test. 
* gnu/packages/python.scm (python)[source]: Remove another test.
 2017-06-19 11:37:27 +03:00
Danny Milosavljevic 7fadeab448
gnu: Add python-smmap2. 
* gnu/packages/python.scm (python-smmap2, python2-smmap2): New variables.
 2017-06-18 14:10:26 +02:00
Mark H Weaver 9d4385634d
Merge branch 'master' into core-updates 2017-06-18 02:36:51 -04:00
Danny Milosavljevic 7ea498e5cd
gnu: Add python-apache-libcloud. 
* gnu/packages/python.scm (python-apache-libcloud, python2-apache-libcloud):
New variables.
 2017-06-17 20:43:11 +02:00
Muriithi Frederick Muriuki ef74a425e6
gnu: python-rednose: Add the python2 variant. 
* gnu/packages/python.scm (python2-rednose): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-06-12 21:31:25 +02:00
Muriithi Frederick Muriuki af842d45b1
gnu: python-sphinx-rtd-theme: Update to 0.2.4. 
* gnu/packages/python.scm (python-sphinx-rtd-theme): Update to 0.2.4.
[source]: Use 'pypi-uri'.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-06-12 21:31:25 +02:00
Marius Bakke 5bace4c8ad
Merge branch 'master' into core-updates 
Conflicts:
* gnu/packages/tls.scm (gnutls): Incorporated 3.5.13 graft (88e2511e21).
 2017-06-11 02:07:06 +02:00
Danny Milosavljevic 4eadc8b90d
gnu: Add python-swagger-spec-validator. 
* gnu/packages/python.scm (python-swagger-spec-validator,
python2-swagger-spec-validator): New variables.
 2017-06-10 23:48:50 +02:00
Marius Bakke ea45e2c500
Merge branch 'master' into core-updates 2017-06-10 02:57:50 +02:00
宋文武 b22cdf0c42
gnu: python-paramiko: Update to 2.1.2. 
* gnu/packages.scm (python-paramiko, python2-paramiko):
Update to 2.1.2.  Enable tests.
 2017-06-09 20:50:11 +08:00
Leo Famulari 9f825cec1b
Merge branch 'master' into core-updates 2017-06-04 14:56:31 -04:00
Danny Milosavljevic 543c5f3fda
gnu: Add python-flasgger. 
* gnu/packages/python.scm (python-flasgger, python2-flasgger): New variables.
 2017-06-04 15:42:04 +02:00
Danny Milosavljevic 635b3636e2
gnu: Add python-apispec. 
* gnu/packages/python.scm (python-apispec, python2-apispec): New variables.
 2017-06-04 15:41:58 +02:00
Danny Milosavljevic d270df8d62
gnu: Add python-bottle. 
* gnu/packages/python.scm (python-bottle, python2-bottle): New variables.
 2017-06-04 15:41:53 +02:00
Danny Milosavljevic 235bc01b28
gnu: Add python-marshmallow. 
* gnu/packages/python.scm (python-marshmallow, python2-marshmallow):
New variables.
 2017-06-04 15:41:48 +02:00
Danny Milosavljevic 620b59eac9
gnu: Add python-flex. 
* gnu/packages/python.scm (python-flex, python2-flex): New variables.
 2017-06-04 15:41:42 +02:00
Danny Milosavljevic 0960bf8b39
gnu: Add python-validate-email. 
* gnu/packages/python.scm (python-validate-email, python2-validate-email):
New variables.
 2017-06-04 15:41:37 +02:00
Danny Milosavljevic 7d88093f42
gnu: Add python-rfc3987. 
* gnu/packages/python.scm (python-rfc3987, python2-rfc3987): New variables.
 2017-06-04 15:41:30 +02:00
Danny Milosavljevic 1e92287d41
gnu: Add python-jsonpointer. 
* gnu/packages/python.scm (python-jsonpointer, python2-jsonpointer):
New variables.
 2017-06-04 15:41:02 +02:00
Muriithi Frederick Muriuki 7e488f9991
gnu: Add python-nose-randomly. 
* gnu/packages/python.scm (python-nose-randomly, python2-nose-randomly): New
variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-06-04 14:48:18 +02:00
Muriithi Frederick Muriuki 5786b47c7e
gnu: Add python2-steadymark. 
* gnu/packages/python.scm (python2-steadymark): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-06-04 14:42:29 +02:00
Muriithi Frederick Muriuki 511b47dec2
gnu: Add python-misaka. 
* gnu/packages/python.scm (python-misaka, python2-misaka): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-06-04 14:38:49 +02:00
Muriithi Frederick Muriuki a0ffc701d4
gnu: Add python2-couleur. 
* gnu/packages/python.scm (python2-couleur): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-06-04 14:28:58 +02:00
Muriithi Frederick Muriuki 50d586f6df
gnu: Add python-sure. 
* gnu/packages/python.scm (python-sure, python2-sure): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-06-04 14:18:43 +02:00
Marius Bakke d0c45d2d82
Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/image.scm
        (incorporated libtiff graft)
 2017-06-03 17:51:21 +02:00
Sergei Trofimovich 9491227dcb
gnu: python-file: Drop outdated patch. 
* gnu/local.mk: Remove python-file-double-encoding-bug.patch
* gnu/packages/patches/python-file-double-encoding-bug.patch: Delete file.
* gnu/packages/python.scm (python-file)[source]:
Remove "python-file-double-encoding-bug.patch".

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2017-06-01 09:14:17 +02:00
Roel Janssen 76ab3141f5
gnu: scons: Update to 2.5.1. 
* gnu/packages/python.scm (scons): Update to 2.5.1.
 2017-05-31 17:40:16 +02:00
Muriithi Frederick Muriuki 65e7d52a0c
gnu: Add python-radon 
* gnu/packages/python.scm (python-radon, python2-radon): New variables.
 2017-05-27 13:46:40 -04:00
Adriano Peluso ecca63b654
gnu: Add python-relatorio. 
* gnu/packages/python.scm (python-relatorio, python2-relatorio): New variables.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-05-27 18:41:12 +05:30
Adriano Peluso b208f71b9b
gnu: Add python-genshi. 
* gnu/packages/python.scm (python-genshi, python2-genshi): New variables.
 * gnu/packages/patches/python-genshi-add-support-for-python-3.4-AST.patch: New file.
 * gnu/packages/patches/python-genshi-buildable-on-python-2.7.patch: New file.
 * gnu/packages/patches/python-genshi-disable-speedups-on-python-3.3.patch: New file.
 * gnu/packages/patches/python-genshi-fix-tests-on-python-3.5.patch: New file.
 * gnu/packages/patches/python-genshi-isstring-helper.patch: New file.
 * gnu/packages/patches/python-genshi-stripping-of-unsafe-script-tags.patch: New file.
 * gnu/local.mk (dist_patch_DATA): Add them.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-05-27 18:41:12 +05:30
Adriano Peluso ad2ef26073
gnu: Add python-sql. 
* gnu/packages/python.scm (python-sql, python2-sql): New variables.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-05-27 18:12:34 +05:30
Leo Famulari dc1bd2b560
gnu: python-cryptography: Update to 1.8.2. 
* gnu/packages/python.scm (python-cryptography, python2-cryptography,
python-cryptography-vectors, python2-cryptography-vectors):
Update to 1.8.2.
(python-cryptography, python2-cryptography)[propagated-inputs]: Add
python-asn1crypto and python-packaging. Remove python-pyasn1.
[native-inputs]: Remove python-pyasn1 and python-pyasn1-modules.
 2017-05-26 14:47:43 -04:00
Leo Famulari c0f5b80295
gnu: Add python-packaging. 2017-05-26 14:47:42 -04:00
José Miguel Sánchez García 8347c12291
gnu: python-xcffib: Update to 0.5.1. 
* gnu/packages/python.scm (python-xcffib): Update to 0.5.1.
[source]: Use 'pypi-uri'.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-26 20:30:32 +02:00
José Miguel Sánchez García e46bf22391
gnu: python-xcffib: Fix libxcb.so.1 path. 
* gnu/packages/python.scm (python-xcffib)[arguments]<#:phases>: Add phase to
embed full path to libxcb.so.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-26 20:30:32 +02:00
Danny Milosavljevic 013e1e853b
gnu: Add python-flask-migrate. 
* gnu/packages/python.scm (python-flask-migrate,
python2-flask-migrate): New variables.
 2017-05-26 11:59:49 +02:00
Danny Milosavljevic 75baf3193c
gnu: Add python-flask-script. 
* gnu/packages/python.scm (python-flask-script,
python2-flask-script): New variables.
 2017-05-26 11:59:39 +02:00
Stefan Reichoer ca0e62bfe2
gnu: Add python-ansi2html. 
* gnu/packages/python.scm (python-ansi2html, python2-ansi2html): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-25 23:27:31 +02:00
Danny Milosavljevic d169326908
gnu: Add python-behave-web-api. 
Fixes <http://bugs.gnu.org/26906>.

* gnu/packages/python.scm (python-behave-web-api, python2-behave-web-api):
New variables.
 2017-05-25 11:37:29 +02:00
Danny Milosavljevic 8ed1288938
gnu: Enable python-parse-type tests. 
Fixes <http://bugs.gnu.org/26900>.

* gnu/packages/python.scm (python-parse-type)[arguments]: Enable tests.
Add phase "patch-tests".
[native-inputs]: Add python-pytest, python-pytest-runner.
[properties]: Add python2-variant.
(python2-parse-type): New variable.
 2017-05-25 11:37:26 +02:00
Leo Famulari 5e0ddfba7c
gnu: python-pyasn1: Update to 0.2.3. 
* gnu/packages/python.scm (python-pyasn1, python2-pyasn1): Update to 0.2.3.
 2017-05-24 16:35:54 -04:00
Leo Famulari 37c04f9184
gnu: python-idna: Update to 2.5. 
* gnu/packages/python.scm (python-idna, python2-idna): Update to 2.5.
[source]: Use pypi-uri.
 2017-05-24 16:35:53 -04:00
José Miguel Sánchez García 80f78e8f6f
gnu: python-cairocffi: Update to 0.8.0. 
* gnu/packages/python.scm (python-cairocffi): Update to 0.8.0.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-05-24 15:12:31 +05:30
José Miguel Sánchez García 3015d4556f
gnu: python-cairocffi: Update source and home-page URIs. 
* gnu/packages/python.scm (python-cairocffi)[source]: Update URI.
[home-page]: Update URI.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-05-24 15:12:31 +05:30
Ben Woodcroft c522f57e22
gnu: python-future: Update to 0.16.0. 
* gnu/packages/python.scm (python-future): Update to 0.16.0.
 2017-05-21 15:42:08 +01:00
Mathieu Othacehe a5e8f5972c
gnu: python-termcolor: Fix uri. 
* gnu/packages/python.scm (python-termcolor): Remove "python-" from
  pypi uri.

This was causing guix refresh to fail on this package.
 2017-05-13 12:40:20 +02:00
Julien Lepiller f048db5aac
gnu: Fix python2-django-allauth. 
* gnu/packages/python.scm (python-openid)[properties]: Use python2-variant.
 2017-05-11 21:58:31 +02:00
Julien Lepiller 91154d4a40
gnu: Add python-fakeredis. 
* gnu/packages/python.scm (python-fakeredis, python2-fakeredis): New variables.
 2017-05-11 21:58:09 +02:00
Julien Lepiller c009e93451
gnu: Add python-hiredis. 
* gnu/packages/python.scm (python-hiredis, python2-hiredis): New variables.
 2017-05-11 21:58:07 +02:00
Julien Lepiller 3b08d1a612
gnu: Add python-mysqlclient. 
* gnu/packages/python.scm (python-mysqlclient, python2-mysqlclient): New variables.
 2017-05-11 21:57:45 +02:00
Julien Lepiller 5f25fd69df
gnu: Add python-translate-toolkit. 
* gnu/packages/python.scm (python-translate-toolkit, python2-translate-toolkit):
New variables.
 2017-05-11 21:57:42 +02:00
Julien Lepiller 54153b85c7
gnu: Add python-factory-boy. 
* gnu/packages/python.scm (python-factory-boy, python2-factory-boy): New variables.
 2017-05-11 21:57:37 +02:00
Julien Lepiller 18c2546078
gnu: Add python2-stemming. 
* gnu/packages/python.scm (python2-stemming): New variable.
 2017-05-11 21:57:35 +02:00
Julien Lepiller 38a370d2bc
gnu: Add python-scandir. 
* gnu/packages/python.scm (python-scandir, python2-scandir): New variables.
 2017-05-11 21:57:32 +02:00
Julien Lepiller a17ccbbb12
gnu: Add python-levenshtein. 
* gnu/packages/python.scm (python-levenshtein, python2-levenshtein):
New variables.
 2017-05-11 21:57:29 +02:00
Julien Lepiller e139c7a742
gnu: python-dateutil: Update to 2.6.0. 
* gnu/packages/python.scm (python-dateutil, python2-dateutil): Update to 2.6.0.
 2017-05-11 21:57:27 +02:00
Julien Lepiller afdfbb1dca
gnu: Add python-elasticsearch. 
* gnu/packages/python.scm (python-elasticsearch, python2-elasticsearch):
New variables.
 2017-05-11 21:57:24 +02:00
Julien Lepiller 1b16f1ecb1
gnu: Add python-nosexcover. 
* gnu/packages/python.scm (python-nosexcover, python2-nosexcover): New variables.
 2017-05-11 21:57:21 +02:00
Julien Lepiller d15a47911a
gnu: Add python-dirsync. 
* gnu/packages/python.scm (python-dirsync, python2-dirsync): New variables.
 2017-05-11 21:57:18 +02:00
Julien Lepiller 186d4f8d08
gnu: Add python-diff-match-patch. 
* gnu/packages/python.scm (python-diff-match-patch, python2-diff-match-patch):
New variables.
 2017-05-11 21:57:16 +02:00
Julien Lepiller 03ded2fd3b
gnu: Add python-cssmin. 
* gnu/packages/python.scm (python-cssmin, python2-cssmin): New variables.
 2017-05-11 21:57:13 +02:00
Julien Lepiller eed206cb8a
gnu: python-rq: Update to 0.7.1. 
* gnu/packages/python.scm (python-rq, python2-rq): Update to 0.7.1.
[source]: Use pypi-uri.
 2017-05-11 21:57:10 +02:00
Julien Lepiller 4c066b727c
gnu: Add python-sphinx-me. 
* gnu/packages/python.scm (python-sphinx-me, python2-sphinx-me): New variables.
 2017-05-11 21:57:08 +02:00
Julien Lepiller 709a5a9365
gnu: Add python-webassets. 
* gnu/packages/python.scm (python-webassets, python2-webassets): New variables.
 2017-05-11 21:57:05 +02:00
Julien Lepiller 75805449cf
gnu: Add python-utils. 
* gnu/packages/python.scm (python-utils, python2-utils): New variables.
 2017-05-11 21:57:02 +02:00
Julien Lepiller 2d6e56baa7
gnu: Add python-pytest-catchlog. 
* gnu/packages/python.scm (python-pytest-catchlog, python2-pytest-catchlog):
New variables.
 2017-05-11 21:56:58 +02:00
Julien Lepiller 59a972885c
gnu: Add python-pytest-warnings. 
* gnu/packages/python.scm (python-pytest-warnings, python2-pytest-warnings):
New variables.
 2017-05-11 21:56:54 +02:00
Julien Lepiller 047160f2f1
gnu: python-pytest-runner: Update to 2.11.1. 
* gnu/packages/python.scm (python-pytest-runner)
(python2-pytest-runner): Update to 2.11.1.
 2017-05-11 21:56:35 +02:00
Leo Famulari cb542830a2
gnu: python-kitchen: Update home-page URL. 
* gnu/packages/python.scm (python-kitchen, python2-kitchen)[home-page]:
Update URL.
 2017-05-10 23:37:24 -04:00
Ethan R. Jones 5ee684ff2f
gnu: python2-dogtail: Update home-page URL. 
* gnu/packages/python.scm (python2-dogtail)[home-page]: Update URL.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-05-10 23:37:23 -04:00
Leo Famulari 68ab3e6c9a
gnu: python-icalendar: Update to 3.11.4. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.4.
 2017-05-10 21:58:06 -04:00
Adriana Peluso f9f67fcb0f
gnu: Fix attributions for Adriano Peluso. 
* gnu/packages/emacs.scm, gnu/packages/perl.scm, gnu/packages/python.scm,
gnu/packages/xml.scm: Update copyright attributions for Adriano Peluso.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-05-07 20:17:55 -04:00
Danny Milosavljevic 7e16478f18
gnu: Add python-mwclient. 
Fixes <https://bugs.gnu.org/26744>.

* gnu/packages/python.scm (python-mwclient, python2-mwclient): New variables.
 2017-05-02 22:21:36 +02:00
Danny Milosavljevic 1aecfe176a
gnu: python-pytest-cov: Update to 2.4.0. 
Fixes <https://bugs.gnu.org/26743>.

* gnu/packages/python.scm (python-pytest-cov): Update to 2.4.0.
 2017-05-02 22:20:44 +02:00
Danny Milosavljevic 6e7302e93b
gnu: Add python-flask-oidc. 
Fixes <https://bugs.gnu.org/26731>.

* gnu/packages/python.scm (python-flask-oidc): New variable.
 2017-05-02 09:27:18 +02:00
Danny Milosavljevic f3f8d159c3
gnu: Add python-oauth2client. 
* gnu/packages/python.scm (python-oauth2client): New variable.
 2017-05-02 09:27:17 +02:00
Christopher Baines 6fdeb324a0
gnu: python-tornado: Update to 4.5.1. 
* gnu/packages/python.scm (python-tornado): Update to 4.5.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-01 23:59:22 +02:00
Christopher Baines e537c917e8
gnu: Add python-sockjs-tornado. 
* gnu/packages/python.scm (python-sockjs-tornado): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-05-01 23:59:15 +02:00
Maxim Cournoyer e93793059d
gnu: python2-urwid: Disable vterm tests. 
* gnu/packages/python.scm (python2-urwid)['delete-test_vterm]: Add phase to
delete problematic test modules.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-05-01 17:28:20 +02:00
Leo Famulari 4d31d14397
gnu: python-llfuse: Update to 1.2. 
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.2.
 2017-04-30 17:15:37 -04:00
Christopher Allan Webber b9ce9eca23
python-sphinxcontrib-programoutput: Update to 0.10. 
* gnu/packages/python.scm (python-sphinxcontrib-programoutput): Update to 0.10.
 2017-04-29 18:50:53 -05:00
Danny Milosavljevic 0660d3276c
gnu: python-openid: Fix package. 
Fixes <https://bugs.gnu.org/26692>.

* gnu/packages/python.scm (python-openid)[arguments]: Replace 'check phase.
[propagated-inputs]: Add python-defusedxml.
[native-inputs]: Add python-psycopg2, python-django.
 2017-04-29 10:52:55 +02:00
David Thompson 0cb9fba3dc
gnu: awscli: Add python-pyyaml input. 
Without this input, 'aws ec2 import-key-pair' doesn't work.

* gnu/packages/python.scm (awscli)[propagated-inputs]: Add python-pyyaml.
 2017-04-28 09:20:37 -04:00
Marius Bakke 833df99d62
gnu: python-pyopenssl: Update to 17.0.0. 
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.0.0.
[native-inputs]: Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: Adjust.
 2017-04-21 15:36:36 +02:00
Ben Sturmfels 16fe516e78
gnu: Add python-fudge. 
* gnu/packages/python.scm (python-fudge): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-04-18 19:16:45 +02:00
Tobias Geerinckx-Rice d1e4ad1b02
gnu: Fix typos in descriptions. 
* gnu/packages/admin.scm (di)[description]: Likewise.
* gnu/packages/bioinformatics.scm (r-annotate)[description]: Likewise.
* gnu/packages/datastructures.scm (sparsehash)[description]: Likewise.
* gnu/packages/dns.scm (knot)[description]: Likewise.
* gnu/packages/emacs.scm (emacs-idle-highlight)[synopsis, description]:
Likewise.
* gnu/packages/gnome.scm (libpeas)[description]: Likewise.
* gnu/packages/gtk.scm (python2-pygtk)[description]: Likewise.
* gnu/packages/kde-frameworks.scm (kactivities)[description]: Fix typo.
* gnu/packages/libevent.scm (perl-anyevent)[description]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[description]: Likewise.
* gnu/packages/mail.scm (mlmmj)[description]: Likewise.
* gnu/packages/maths.scm (vc)[description]: Likewise.
* gnu/packages/music.scm (gx-super-fuzz-lv2)[description]: Likewise.
* gnu/packages/networking.scm (nload)[description]: Likewise.
* gnu/packages/python.scm (python-execnet)[description]: Likewise.
* gnu/packages/terminals.scm (tilda)[description]: Likewise.
* gnu/packages/python.scm (python-execnet, python-tables)
(python2-coverage-test-runner, python2-rope)[description]: Likewise.
 2017-04-17 02:04:08 +02:00
Ben Sturmfels c1aba1a7c8
gnu: python-paramiko: Update to 1.17.4. 
* gnu/packages/python.scm (python-paramiko): Update to 1.17.4.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-11 18:03:35 +02:00
Mark H Weaver 482cd367c6
Revert "gnu: Add python-openid." 
This reverts commit ccda568866.
 2017-04-09 03:50:40 -04:00
ng0 ccda568866
gnu: Add python-openid. 
* gnu/packages/python.scm (python-openid): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:11 -04:00
Marius Bakke a3dea99107
gnu: python2-cython: Fix build on 32-bit platforms. 
* gnu/packages/python.scm (python-cython, python2-cython)[source]: Add patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-04-04 17:46:28 +02:00
Muriithi Frederick Muriuki b98d4ec0aa
gnu: Add python-mando-0.3.1 
* gnu/packages/python.scm (python-mando-0.3.1): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-04 00:10:00 +02:00
Marius Bakke 350a30845c
gnu: python-pexpect: Use python-pytest@3.0. 
* gnu/packages/python.scm (python-pexpect, python2-pexpect)[native-inputs]:
Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
 2017-04-03 19:25:57 +02:00
Marius Bakke cd158a2b77
gnu: python-cython: Update to 0.25.2. 
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.25.2.
 2017-04-03 19:25:56 +02:00
Leo Famulari 7bf837fd43
gnu: Use HTTPS URLs for GitHub home-pages. 
* gnu/packages/bioinformatics.scm, gnu/packages/emacs.scm,
gnu/packages/haskell.scm, gnu/packages/libffi.scm, gnu/packages/lisp.scm,
gnu/packages/ocaml.scm, gnu/packages/openstack.scm, gnu/packages/python.scm,
gnu/packages/ruby.scm, gnu/packages/shells.scm, gnu/packages/statistics.scm,
gnu/packages/xdisorg.scm: Use HTTPS URLs for all packages with a home-page on
GitHub.
 2017-04-02 20:00:51 -04:00
Marius Bakke 84157bb8bf
Merge branch 'master' into core-updates 
Most conflicts are from 6fd52309b8.
 2017-03-30 22:59:53 +02:00
Leo Famulari 5e92341471
gnu: python-enum34: Update to 1.1.6. 
* gnu/packages/python.scm (python-enum34, python2-enum34): Update to 1.1.6.
[arguments]: Remove custom test phase.
 2017-03-29 16:39:04 -04:00
Marius Bakke 3ee9355e2f
gnu: python-pexpect: Add verbose test output. 
Fixes <https://bugs.gnu.org/26286>.

* gnu/packages/python.scm (python-pexpect, python2-pexpect)[arguments]: Add
"-v" to "nosetests" command.
 2017-03-29 02:31:59 +02:00
Leo Famulari 23b9168dcd
gnu: python-pytest-2.9.2: Replace with python-pytest-3.0. 
* gnu/packages/python.scm (python-pytest-2.9.2): Replace with ...
(python-pytest-3.0): ... new variable.
(python2-pytest-3.0): New variable.
(python-cryptography, python2-cryptography, python-sphinx-1.5.3)[native-inputs]:
Replace python-pytest-2.9.2 with python-pytest-3.0.
* gnu/packages/backup.scm (borg)[native-inputs]: Likewise.
gnu/packages/calendar.scm (khal)[native-inputs]: Likewise.
 2017-03-28 15:59:22 -04:00
Muriithi Frederick Muriuki eec21d4be7
gnu: Add python-mando 
* gnu/packages/python.scm (python-mando, python2-mando): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-03-28 15:59:22 -04:00
Muriithi Frederick Muriuki 5d0c3ba856
gnu: Add python-paramunittest 
* gnu/packages/python.scm (python-paramunittest, python2-paramunittest): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-03-28 15:59:22 -04:00
Muriithi Frederick Muriuki 3061b33190
gnu: Add python-sphinx@1.5.3. 
* gnu/packages/python.scm (python-sphinx-1.5.3): New variable.
 2017-03-28 15:59:22 -04:00
Muriithi Frederick Muriuki 7f71e2579a
gnu: Add python-pytest@3.0.7 
* gnu/packages/python.scm (python-pytest-3.0.7): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-03-28 15:59:18 -04:00
Leo Famulari c17383f400
Merge branch 'master' into core-updates 2017-03-27 21:19:38 -04:00
Efraim Flashner c5be3467f2
gnu: python2-dogtail: Update to 0.9.9. 
* gnu/packages/python.scm (python2-dogtail): Update to 0.9.9.
[source]: Download using pypi-uri scheme.
 2017-03-25 23:53:03 +03:00
Leo Famulari 26b16fd9ca
gnu: python-appdirs: Use pypi-uri. 
This is a followup to commit 543782e1ff.

* gnu/packages/python.scm (python-appdirs, python2-appdirs)[source]: Use
pypi-uri.
 2017-03-23 12:06:15 -04:00
Efraim Flashner 0371b345e8
Merge remote-tracking branch 'origin/master' into core-updates 2017-03-23 14:53:33 +02:00
Tobias Geerinckx-Rice a06cd95ab0
gnu: python-natsort: Update to 5.0.2. 
* gnu/packages/python.scm (python-natsort): Update to 5.0.2.
 2017-03-23 02:53:17 +01:00
Tobias Geerinckx-Rice e17a12482b
gnu: python2-futures: Update to 3.0.5. 
* gnu/packages/python.scm (python2-futures): Update to 3.0.5.
 2017-03-23 02:53:17 +01:00
Tobias Geerinckx-Rice 06fe79f263
gnu: python-rauth: Update to 0.7.3. 
* gnu/packages/python.scm (python-rauth): Update to 0.7.3.
 2017-03-23 02:53:17 +01:00
Tobias Geerinckx-Rice 36e0d9db90
gnu: python-ipaddress: Update to 1.0.18. 
* gnu/packages/python.scm (python-ipaddress): Update to 1.0.18.
 2017-03-23 02:53:16 +01:00
Tobias Geerinckx-Rice 543782e1ff
gnu: python-appdirs: Update to 1.4.3. 
* gnu/packages/python.scm (python-appdirs): Update to 1.4.3.
 2017-03-23 02:53:16 +01:00
Tobias Geerinckx-Rice 80e8d8517a
gnu: python-beautifulsoup4: Update to 4.5.3. 
* gnu/packages/python.scm (python-beautifulsoup4): Update to 4.5.3.
 2017-03-23 02:53:15 +01:00
Tobias Geerinckx-Rice 7c4279322e
gnu: python-drmaa: Update to 0.7.7. 
* gnu/packages/python.scm (python-drmaa): Update to 0.7.7.
 2017-03-23 02:53:15 +01:00
Tobias Geerinckx-Rice fd2662e950
gnu: python-sqlalchemy-utils: Update to 0.32.13. 
* gnu/packages/python.scm (python-sqlalchemy-utils): Update to 0.32.13.
 2017-03-23 02:53:15 +01:00
Tobias Geerinckx-Rice 745d85b7db
gnu: python-pafy: Update to 0.5.3.1. 
* gnu/packages/python.scm (python-pafy): Update to 0.5.3.1.
 2017-03-23 02:53:14 +01:00
Efraim Flashner 378de69c59
Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
Tobias Geerinckx-Rice 8e71896340
gnu: python-psycopg2: Update to 2.6.2. 
* gnu/packages/python.scm (python-psycopg2): Update to 2.6.2.
 2017-03-22 02:03:35 +01:00
Tobias Geerinckx-Rice 35e1a0f1a7
gnu: python-zope-component: Update to 4.3.0. 
* gnu/packages/python.scm (python-zope-component): Update to 4.3.0.
[source]: Use pypi-uri.
 2017-03-22 02:03:35 +01:00
Tobias Geerinckx-Rice c56ad5e291
gnu: python-atomicwrites: Update to 1.1.5. 
* gnu/packages/python.scm (python-atomicwrites): Update to 1.1.5.
 2017-03-22 02:03:34 +01:00
Tobias Geerinckx-Rice 4c4d4df393
gnu: python-texttable: Update to 0.8.7. 
* gnu/packages/python.scm (python-texttable): Update to 0.8.7.
 2017-03-22 02:03:34 +01:00
Tobias Geerinckx-Rice d5c183d134
gnu: python-feedgenerator: Update to 1.9. 
* gnu/packages/python.scm (python-feedgenerator): Update to 1.9.
 2017-03-22 02:03:34 +01:00
Tobias Geerinckx-Rice d25bee2600
gnu: python-wrapt: Update to 1.10.8. 
* gnu/packages/python.scm (python-wrapt): Update to 1.10.8.
[source]: Use pypi-uri.
 2017-03-22 02:03:33 +01:00
Tobias Geerinckx-Rice b9463fdba2
gnu: python-py: Update to 1.4.32. 
* gnu/packages/python.scm (python-py): Update to 1.4.32.
 2017-03-22 02:03:33 +01:00
Tobias Geerinckx-Rice 5095bc7d71
gnu: python-sphinx-cloud-sptheme: Update to 1.8.0. 
* gnu/packages/python.scm (python-sphinx-cloud-sptheme): Update to 1.8.0.
 2017-03-22 02:03:33 +01:00
Tobias Geerinckx-Rice 9e59478f8d
gnu: python-wcwidth: Update to 0.1.7. 
* gnu/packages/python.scm (python-wcwidth): Update to 0.1.7.
[source]: Use pypi-uri.
 2017-03-22 02:03:32 +01:00
Tobias Geerinckx-Rice 4ffbe8c6d7
gnu: python-markdown: Update to 2.6.8. 
* gnu/packages/python.scm (python-markdown): Update to 2.6.8.
 2017-03-22 02:03:32 +01:00
Leo Famulari a9681c74ca
gnu: python-pillow: Fix test failures with freetype-2.7. 
* gnu/packages/patches/python-pillow-freetype-2.7-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pillow, python2-pillow)[source]: Use it.
 2017-03-21 16:20:10 -04:00
Ricardo Wurmus 4f9998c66f
gnu: snakemake: Add runtime dependencies. 
* gnu/packages/python.scm (snakemake)[propagated-inputs]: Add python-wrapt and
python-requests.
 2017-03-20 15:13:19 +01:00
Arun Isaac 315944a393
gnu: Add python-pylint. 
* gnu/packages/python.scm (python-pylint, python2-pylint): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-20 00:40:31 +01:00
Arun Isaac 61550dedf3
gnu: Add python2-coverage-test-runner. 
* gnu/packages/python.scm (python2-coverage-test-runner): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-20 00:40:31 +01:00
Arun Isaac 23db3fc67d
gnu: Add python-configparser. 
* gnu/packages/python.scm (python-configparser, python2-configparser): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-20 00:40:30 +01:00
Arun Isaac 965a083ed2
gnu: Add python2-backports-functools-lru-cache. 
* gnu/packages/python.scm (python2-backports-functools-lru-cache): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-20 00:40:30 +01:00
Arun Isaac 6ba0af7960
gnu: Add python-isort. 
* gnu/packages/python.scm (python-isort, python2-isort): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-20 00:40:30 +01:00
Arun Isaac d5ef113c05
gnu: Add python-astroid. 
* gnu/packages/python.scm (python-astroid, python2-astroid): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-20 00:40:30 +01:00
Mark H Weaver f67337e23e
Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
Ludovic Courtès 5927a843b4
gnu: python-minimal@2: Add dependencies on libffi and zlib. 
* gnu/packages/python.scm (python2-minimal)[inputs]: Add LIBFFI and ZLIB.
[arguments]: Remove.
 2017-03-19 23:42:57 +01:00
Ricardo Wurmus ef71ed8ffa
gnu: snakemake: Update to 3.11.2. 
* gnu/packages/python.scm (snakemake): Update to 3.11.2.
 2017-03-17 10:14:03 +01:00
Ricardo Wurmus 2d7c4ae3ee
gnu: r: Rename to r-minimal. 
* gnu/packages/statistics.scm (r): Rename to...
(r-minimal): ...this new variable.
(r-with-recommended-packages): Rename to...
(r): ...this.
* guix/build-system/r.scm (default-r): Reference r-minimal.
* gnu/packages/emacs.scm (emacs-ess)[inputs],
gnu/packages/machine-learning.scm (shogun)[inputs],
gnu/packages/python.scm (python-rpy2)[inputs],
gnu/packages/bioinformatics.scm (ribotaper)[inputs],
(couger)[propagated-inputs],
(roary)[inputs],
(rsem)[inputs],
(rcas-web)[inputs]: Change "r" to "r-minimal".
 2017-03-17 10:14:02 +01:00
Ricardo Wurmus aeb64f3cb2
gnu: r: Do not build recommended packages. 
* gnu/packages/statistics.scm (r)[arguments]: Rename phase
"build-recommended-packages-reproducibly" to "build-reproducibly"; add
configure flag "--without-recommended-packages".
* guix/import/cran.scm (default-r-packages): Remove recommended packages.
* gnu/packages/python.scm (python-rpy2)[inputs]: Add r-survival.
* gnu/packages/bioinformatics.scm (r-ape)[propagated-inputs]: Add r-lattice
and r-nlme.
(r-vegan)[propagated-inputs]: Add r-mass.
(r-genefilter)[propagated-inputs]: Add r-survival.
(r-grohmm)[propagated-inputs]: Add r-mass.
(r-bioccheck)[propagated-inputs]: Add r-codetools.
(r-summarizedexperiment)[propagated-inputs]: Add r-matrix.
(r-topgo)[propagated-inputs]: Add r-lattice.
(r-sva)[propagated-inputs]: Add r-mgcv.
(r-raremetals2)[propagated-inputs]: Add r-mass.
(r-vsn)[propagated-inputs]: Add r-lattice.
(r-pcamethods)[propagated-inputs]: Add r-mass.
* gnu/packages/bioinformatics.scm (r-ggplot2)[propagated-inputs]: Add r-mass.
(r-locfit)[propagated-inputs]: Add r-lattice.
(r-coda)[propagated-inputs]: Add r-lattice.
(r-irlba)[propagated-inputs]: Add r-matrix.
(r-glmnet)[propagated-inputs]: Add r-matrix.
(r-e1071)[propagated-inputs]: Add r-class.
(r-spams)[propagated-inputs]: Add r-lattice and r-matrix.
(r-hmisc)[propagated-inputs]: Add r-cluster, r-foreign, r-lattice, r-nnet, and
r-rpart.
(r-zoo)[propagated-inputs]: Add r-lattice.
(r-mixtools)[propagated-inputs]: Add r-boot and r-mass.
(r-flexmix)[propagated-inputs]: Add r-lattice and r-nnet.
(r-prabclus)[propagated-inputs]: Add r-mass.
(r-fpc)[propagated-inputs]: Add r-class, r-cluster, and r-mass.
(r-rcppeigen)[propagated-inputs]: Add r-matrix.
(r-matrixmodels)[propagated-inputs]: Add r-matrix.
(r-lme4)[propagated-inputs]: Add r-mass and r-nlme.
(r-pbkrtest)[propagated-inputs]: Add r-mass and r-matrix.
(r-car)[propagated-inputs]: Add r-mass, r-mgcv, and r-nnet.
(r-tclust)[propagated-inputs]: Add r-cluster.
 2017-03-17 10:14:02 +01:00
Efraim Flashner 4cacd87e4d
Merge remote-tracking branch 'origin/master' into core-updates 2017-03-16 13:11:28 +02:00
Tobias Geerinckx-Rice 9186216268
gnu: python-publicsuffix2: Update to 2.20160818. 
* gnu/packages/python.scm (python-publicsuffix2): Update to 2.20160818.
 2017-03-16 05:44:02 +01:00
Tobias Geerinckx-Rice 192b887a03
gnu: awscli: Update to 1.11.63. 
* gnu/packages/python.scm (awscli): Update to 1.11.63.
 2017-03-16 05:44:01 +01:00
Tobias Geerinckx-Rice d93985fe22
gnu: python-botocore: Update to 1.5.26. 
* gnu/packages/python.scm (python-botocore): Update to 1.5.26.
 2017-03-16 05:44:01 +01:00
Tobias Geerinckx-Rice 70fc93cb28
gnu: python-ptyprocess: Update to 0.5.1. 
* gnu/packages/python.scm (python-ptyprocess): Update to 0.5.1.
 2017-03-16 05:44:01 +01:00
Marius Bakke 4b7e5c1131
Merge branch 'master' into core-updates 2017-03-15 17:52:26 +01:00
Efraim Flashner 27bf00e691
gnu: python-waf: Update to 1.9.8. 
* gnu/packages/python.scm (python-waf, python2-waf): Update to 1.9.8.
[home-page]: Use https.
 2017-03-15 13:08:56 +02:00
Ludovic Courtès 28958b646f
gnu: python-parsedatetime: Update to 2.3. 
Version 2.1 was apparently time-sensitive and started failing like this:

  ======================================================================
  FAIL: testFloat (tests.TestDelta.test)
  ----------------------------------------------------------------------
  Traceback (most recent call last):
    File "/tmp/guix-build-python2-parsedatetime-2.1.drv-0/parsedatetime-2.1/tests/TestDelta.py", line 64, in testFloat
      self.cal.parse('1.4 months ago', self.source), months=-1.4)
    File "/tmp/guix-build-python2-parsedatetime-2.1.drv-0/parsedatetime-2.1/tests/TestDelta.py", line 37, in assertDelta
      self.assertTrue(diff < 0.05, '%s is not less than 0.05' % diff)
  AssertionError: 0.0666666666667 is not less than 0.05

  ----------------------------------------------------------------------

* gnu/packages/python.scm (python-parsedatetime): Update to 2.3.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-PYTEST-RUNNER.
[propagated-inputs]: New field.
 2017-03-14 11:18:16 +01:00
Leo Famulari 49c2a46e74
gnu: python@2.7: Update to 2.7.13 
* gnu/packages/python.scm (python-2.7): Update to 2.7.13.
 2017-03-14 02:45:23 -04:00
Leo Famulari dc5cec21f2
gnu: python@2.7: Fix getentropy() calls on kernels < 3.17. 
* gnu/packages/patches/python-2.7-getentropy-on-old-kernels.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-2.7)[source]: Use it.
 2017-03-14 02:45:23 -04:00
Efraim Flashner 3f9543aee1
Merge remote-tracking branch 'origin/master' into core-updates 2017-03-13 23:08:49 +02:00
Leo Famulari 7cb68a3cb3
gnu: Remove python-3.4. 
* gnu/packages/python.scm (python-3.4): Remove variable.
* gnu/packages/patches/python-3.4-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-03-13 15:33:54 -04:00
humanitiesNerd a71c863834
gnu: Add python-flask-login. 
* gnu/packages/python.scm (python-flask-login, python2-flask-login): New
variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-13 19:36:56 +01:00
humanitiesNerd 78c5566365
gnu: Add python-flask-htmlmin. 
* gnu/packages/python.scm (python-flask-htmlmin, python2-flask-htmlmin): New
variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-13 19:36:55 +01:00
humanitiesNerd 35db2d3cb7
gnu: Add python-htmlmin. 
* gnu/packages/python.scm (python-htmlmin, python2-htmlmin): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-13 19:36:54 +01:00
Marius Bakke e4d34cd0f0
gnu: python@3.5: Fix getentropy() calls on kernels < 3.17. 
* gnu/packages/patches/python-3.5-getentropy-on-old-kernels.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-3.5, python-minimal, python-minimal-wrapper,
python-wrapper)[source]: Use it.
 2017-03-12 18:40:56 +01:00
Marius Bakke 343cee8af3
gnu: python@3.5: Update to 3.5.3. 
* gnu/packages/python.scm (python-3.5, python-minimal, python-minimal-wrapper,
python-wrapper): Update to 3.5.3.
* gnu/packages/patches/python-fix-tests.patch: Adjust patch context.
* gnu/packages/patches/python-3.5-fix-tests.patch: Likewise. Patch one new test.
 2017-03-12 18:40:56 +01:00
Arun Isaac b6b2ca5d19
gnu: Add python2-larch. 
* gnu/packages/python.scm (python2-larch): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-09 17:11:03 +01:00
Arun Isaac c220f0b474
gnu: Add python2-tracing. 
* gnu/packages/python.scm (python2-tracing): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-09 17:09:17 +01:00
Arun Isaac 77e9941160
gnu: Add python2-ttystatus. 
* gnu/packages/python.scm (python2-ttystatus): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-09 16:53:23 +01:00
Arun Isaac 33e9490ca1
gnu: Add python2-cliapp. 
* gnu/packages/python.scm (python2-cliapp): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-09 16:52:53 +01:00
Marius Bakke 6741676911
gnu: python-numpy-documentation: Use full git commit hash in submodule. 
* gnu/packages/python.scm (python-numpy-documentation,
python2-numpy-documentation)[native-inputs]: Update hash of
SCIPY-SPHINX-THEME. Fix indentation of a line.
 2017-03-09 16:39:09 +01:00
Marius Bakke 63d62305c3
gnu: Remove obsolete numpy comment. 
* gnu/packages/python.scm: Remove comment.
 2017-03-09 16:39:08 +01:00
Ludovic Courtès e90e0fad1b
Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
Marius Bakke b03ee02f0d
gnu: python-pandas: Fix build on 32-bit. 
* gnu/packages/patches/python-pandas-skip-failing-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pandas, python2-pandas): Use it.
 2017-03-08 18:04:23 +01:00
Marius Bakke ce7911ddae
gnu: Add python-faker. 
* gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Adjust
paths. Also rename to ...
* gnu/packages/patches/python-faker-fix-build-32bit.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python.scm (python-faker, python2-faker): New variables.
(python-fake-factory)[properties]: Superseded by PYTHON-FAKER.
(python2-fake-factory)[properties]: Superseded by PYTHON2-FAKER.
(python-orator, python2-orator)[propagated-inputs]: Replace
PYTHON-FAKE-FACTORY with PYTHON-FAKER.
 2017-03-08 18:00:43 +01:00
Thomas Danckaert 1eaaea41e5
gnu: python-matplotlib-documentation: Fix build. 
* gnu/packages/python.scm (python-matplotlib-documentation)[native-inputs]:
Add python-mock and graphviz.
[arguments]: Use separate build and install phases; correctly set latex paper size.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-08 17:39:00 +01:00
Pjotr Prins d6abd094fc
gnu: python-rpy2: Propagate python2-singledispatch. 
* gnu/packages/python.scm (python-rp2)[native-inputs]: Rename to...
[propagated-inputs]: ... this.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-07 18:19:51 +01:00
Thomas Danckaert ba062b3ec4
gnu: python-colorspacious: Run tests. 
* gnu/packages/python.scm (python-colorspacious,
python2-colorspacious)[native-inputs]: Add python-nose.
[arguments]: Add custom 'check phase which runs nosetests.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-06 23:51:23 +01:00
Thomas Danckaert 5eefa50abd
gnu: Remove python-sphinx-1.2.3. 
* gnu/packages/python.scm (python-sphinx-1.2.3, python2-sphinx-1.2.3): Remove variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-06 23:28:10 +01:00
Marius Bakke 8e08604814
gnu: python-pandas: Update to 0.19.2. 
* gnu/packages/python.scm (python-pandas, python2-pandas): Update to 0.19.2.
[source]: Use 'pypi-uri'.
 2017-03-06 23:24:03 +01:00
Thomas Danckaert 4535a93adb
gnu: python-matplotlib: Update to 2.0.0. 
* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Update to
2.0.0.
[source]: Remove Tk backend patch, use Github instead of Sourceforge.
[outputs]: Remove "doc" output.
[inputs]: Add python-pyqt.
[propagated-inputs]: Add python-cycler.
[native-inputs]: Remove python-sphinx, python-numpydoc, texlive and texinfo.
(python2-matplotlib)[native-inputs]: Add python2-functools32 and
python2-subprocess32.
(python-matplotlib-documentation, python2-matplotlib-documentation): New
variables.
* gnu/packages/patches/matplotlib-setupext-tk.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-06 23:22:22 +01:00
Marius Bakke 550bd98b41
gnu: Add python2-subprocess32. 
* gnu/packages/python.scm (python2-subprocess32): New variable.
* gnu/packages/patches/python2-subprocess32-disable-input-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-03-06 23:21:34 +01:00
Thomas Danckaert 7ccb71e0ea
gnu: python-numpy: Update to 1.12.0. 
* gnu/packages/python.scm (python-numpy): Update to 1.12.0.
  [source]: Use github instead of sourceforge.
  [native-inputs]: Add python-cython.

  To simplify the handling of dependency cycles (numpy documentation depends
  on matplotlib, which depends on numpy), we split out the documentation into
  a separate package:
  (python-numpy-bootstrap, python2-numpy-bootstrap): Remove variables.
  (python-numpy-documentation, python2-numpy-documentation): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-06 23:21:06 +01:00
Troy Sankey 5b1f31ffcf
gnu: python-setuptools-scm: Update to 1.15.0. 
* gnu/packages/python.scm (python-setuptools-scm): Update to 1.15.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-06 13:55:37 +01:00
Marius Bakke c0446791bd
gnu: python2-backports-shutil-get-terminal-size: Enable tests. 
* gnu/packages/python.scm
(python2-backports-shutil-get-terminal-size)[arguments]: Replace 'check' phase
with custom command.
[native-inputs]: Add PYTHON2-PYTEST.
 2017-03-06 13:22:51 +01:00
Thomas Danckaert fb25d348dd
gnu: python-ipython: Update to 5.2.2. 
* gnu/packages/python.scm (python-ipython): Update to 5.2.2.
[propagated-inputs]: Add pyhon-prompt-toolkit and python-nbformat.
(python2-ipython) [arguments]: Enable tests.
[propagated-inputs]: Add python2-backports-shutil-get-terminal-size.
[native-inputs]: Add graphviz.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2017-03-06 04:35:00 +01:00
Thomas Danckaert 350932536a
gnu: python-scipy: Update to 0.18.1. 
* gnu/packages/python.scm (python-scipy): Update to 0.18.1.
[source]: Use github instead of sourceforge.
[native-inputs]: Add python-cython.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2017-03-06 03:35:26 +01:00
Thomas Danckaert b320f7bf06
gnu: python-testpath: Fix library location for python2 version. 
* gnu/packages/python.scm (python-testpath)[arguments]: Install module in the proper
"lib/pythonx.y" location for all Python versions.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2017-03-06 03:33:39 +01:00
Thomas Danckaert 2aa6d3aeeb
gnu: Add python-colorspacious. 
* gnu/packages/python.scm (python-colorspacious, python2-colorspacious): New
variables.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2017-03-06 03:24:29 +01:00
Thomas Danckaert ec07421332
gnu: Add python2-backports-shutil-get-terminal-size. 
* gnu/packages/python.scm (python2-backports-shutil-get-terminal-size): New
variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2017-03-06 03:22:30 +01:00
Marius Bakke 3f98071ac5
Merge branch 'python-tests' 2017-03-03 16:55:43 +01:00
Leo Famulari da5db9880e
gnu: python-requests: Update to 2.13.0. 
* gnu/packages/python.scm (python-requests, python2-requests): Update to 2.13.0.
 2017-03-03 04:29:55 -05:00
ng0 a80488c204
gnu: Add python-pykka. 
* gnu/packages/python.scm (python-pykka): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-03-02 14:02:00 -05:00
ng0 de95925041
gnu: Add python-eventlet. 
* gnu/packages/python.scm (python-eventlet): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-03-02 14:02:00 -05:00
Thomas Danckaert d5a9783999
gnu: python-netcdf4: Update to 1.2.7. 
* gnu/packages/python.scm (python-netcdf4, python2-netcdf4): Update to 1.2.7.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-02-27 14:55:39 +01:00
Marius Bakke 8779987bba
Merge branch 'master' into python-tests 2017-02-27 12:42:22 +01:00
Marius Bakke 154d0016b5
Revert "gnu: python2-fastlmm: Update to 0.2.26." 
This reverts commit 594358f5b6.
 2017-02-24 21:36:07 +01:00
Marius Bakke 3b86a385db
gnu: python-passlib: Update to 1.7.1. 
* gnu/packages/python.scm (python-passlib, python2-passlib): Update to 1.7.1.
 2017-02-24 19:44:10 +01:00
Marius Bakke 42945fb58c
gnu: python-fake-factory: Fix build on 32bit. 
* gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-fake-factory, python2-fake-factory)[source]:
Use it.
 2017-02-24 18:55:29 +01:00
Efraim Flashner fd61591850
gnu: python: Remove failing test on aarch64. 
* gnu/packages/python.scm (python-3.5)[source]: Add snippet removing
test that fails on aarch64.
 2017-02-21 21:14:57 +02:00
Efraim Flashner d15432ca9e
Merge remote-tracking branch 'origin/master' into core-updates 2017-02-20 12:56:14 +02:00
Marius Bakke 361d982ce3
gnu: Add python-cycler. 
* gnu/packages/python.scm (python-cycler, python2-cycler): New variables.
 2017-02-19 23:29:57 +01:00
Marius Bakke dc027d4014
gnu: python-pyicu: Fix build. 
* gnu/packages/python.scm (python-pyicu, python2-pyicu)[arguments]: New
field. Add phase to delete locale-dependent test.
 2017-02-19 01:20:39 +01:00
Marius Bakke 4d25c486a5
gnu: python-scikit-learn: Fix test failure. 
* gnu/packages/python.scm (python-scikit-learn,
python2-scikit-learn)[arguments]: Use 'modify-phases'. Move 'check' phase
after 'install' and incorporate 'set-HOME' phase.
 2017-02-19 01:19:33 +01:00
Marius Bakke 9200fe14f7
gnu: python-scipy: Declare python2-variant. 
This is a followup to a50e030141.

* gnu/packages/python.scm (python-scipy)[properties]: New field.
 2017-02-19 01:19:33 +01:00
Marius Bakke 2c1cad7ad2
gnu: python-flake8-polyfill: Enable tests. 
* gnu/packages/python.scm (python-flake8-polyfill,
python2-flake8-polyfill)[native-inputs]: Add PYTHON-FLAKE8, PYTHON-MOCK,
PYTHON-PYCODESTYLE and PYTHON-PYTEST. New field.
[arguments]: Replace 'check' phase with custom command.
 2017-02-19 01:19:33 +01:00
Marius Bakke d296d30013
gnu: python-flask-wtf: Drop failing test. 
* gnu/packages/python.scm (python-flask-wtf, python2-flask-wtf)[arguments]:
Add phase to delete file that needs network access.
 2017-02-19 01:19:33 +01:00
Marius Bakke fffcd8b829
gnu: python-pbkdf2: Fix tests. 
* gnu/packages/python.scm (python-pbkdf2)[arguments]: Replace 'check' phase
with custom command.
 2017-02-19 01:19:33 +01:00
Marius Bakke a10b9810c6
gnu: python-sphinx: Propagate python-requests. 
* gnu/packages/python.scm (python-sphinx)[native-inputs]: Move PYTHON-REQUESTS
to ...
[propagated-inputs]: ... here.
 2017-02-19 01:19:32 +01:00
Danny Milosavljevic a1e3ed6e8b
gnu: python-pbr: Support python-sphinx>=1.2.1. 
* gnu/packages/patches/python-pbr-fix-man-page-support.patch: New file.
* gnu/packages/python.scm (python-pbr-minimal): Use the new patch file.
 2017-02-18 16:43:37 +01:00
Leo Famulari b611d01827
gnu: python-icalendar: Update to 3.11.3. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.3.
 2017-02-15 13:03:22 -05:00
Marius Bakke 6925cd788b
gnu: python-qrcode: Disable tests. 
* gnu/packages/python.scm (python-qrcode, python2-qrcode)[arguments]: New field.
 2017-02-15 09:23:01 +01:00
Marius Bakke a31e2f1a56
gnu: python-sphinx-cloud-sptheme: Explicitly disable tests. 
* gnu/packages/python.scm (python-sphinx-cloud-sptheme,
python2-sphinx-cloud-sptheme)[arguments]: New field.
 2017-02-15 09:15:20 +01:00
Marius Bakke 5b3c3d4b5a
gnu: python-sphinx-repoze-autointerface: Disable tests. 
* gnu/packages/python.scm (python-sphinx-repoze-autointerface,
python2-sphinx-repoze-autointerface)[arguments]: New field.
 2017-02-15 09:08:11 +01:00
Marius Bakke 9893cff376
gnu: python-sphinx-rtd-theme: Disable tests. 
* gnu/packages/python.scm (python-sphinx-rtd-theme,
python2-sphinx-rtd-theme)[arguments]: New field.
 2017-02-15 09:05:56 +01:00
Marius Bakke 3d2a544c69
gnu: python-sphinxcontrib-newsfeed: Disable tests. 
* gnu/packages/python.scm (python-sphinxcontrib-newsfeed
python2-sphinxcontrib-newsfeed)[arguments]: New field.
 2017-02-15 09:03:05 +01:00
Marius Bakke e2cb140efb
gnu: python-sphinxcontrib-programoutput: Disable tests. 
* gnu/packages/python.scm (python-sphinxcontrib-programoutput,
python2-sphinxcontrib-programoutput)[arguments]: New field.
 2017-02-15 09:01:08 +01:00
Marius Bakke fe2ba3a888
gnu: python-tabulate: Disable tests. 
* gnu/packages/python.scm (python-tabulate)[arguments]: New field.
[native-inputs]: Remove.
[source]: Remove test substitution snippet.
 2017-02-15 08:28:03 +01:00
Eric Bavier d8768e3172
gnu: Add python-pypeg2. 
* gnu/packages/python.scm (python-pypeg2): New variable.
 2017-02-14 21:20:36 -06:00
Eric Bavier 4dcb135e7c
gnu: Add python-cssutils. 
* gnu/packages/python.scm (python-cssutils): New variable.
(python2-cssutils)[native-inputs]: Remove unused python2-mock.
 2017-02-14 21:14:02 -06:00
Marius Bakke 619bfd811e
gnu: awscli: Explicitly disable tests. 
* gnu/packages/python.scm (awscli)[arguments]: New field.
[native-inputs]: Remove.
 2017-02-14 16:09:49 +01:00
Marius Bakke a9c15e8b59
gnu: awscli: Update to 1.11.47. 
* gnu/packages/python.scm (awscli): Update to 1.11.47.
 2017-02-14 16:03:07 +01:00
Marius Bakke 0a7d96f8e4
gnu: python-botocore: Update to 1.5.10. 
* gnu/packages/python.scm (python-botocore, python2-botocore): Update to 1.5.10.
 2017-02-14 16:02:51 +01:00
Marius Bakke e435af5c2a
gnu: python-mako: Fix tests. 
* gnu/packages/python.scm (python-mako, python2-mako)[native-inputs]: Add
PYTHON-PYTEST.
 2017-02-14 00:49:49 +01:00
Marius Bakke ac72d3d2cc
gnu: python-openid-teams: Disable tests. 
* gnu/packages/python.scm (python-openid-teams,
python2-openid-teams)[arguments]: New field.
 2017-02-14 00:41:07 +01:00
Marius Bakke 019ccdb6c8
gnu: python-openid-cla: Disable tests. 
* gnu/packages/python.scm (python-openid-cla, python2-openid-cla)[arguments]:
New field.
 2017-02-14 00:41:06 +01:00
Marius Bakke bb6043fe9f
gnu: python-pygit2: Skip tests requiring network access. 
* gnu/packages/python.scm (python-pygit2, python2-pygit2)[source](patches):
New field.
* gnu/packages/patches/python-pygit2-disable-network-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-02-14 00:04:59 +01:00
Marius Bakke 97b62eb0bf
gnu: python-trollius-redis: Disable tests. 
* gnu/packages/python.scm (python-trollius-redis,
python2-trollius-redis)[arguments]: New field.
 2017-02-13 22:59:28 +01:00
Marius Bakke 424b1ae769
Merge branch 'master' into python-tests 2017-02-13 22:35:05 +01:00
Julien Lepiller 5220022a80
gnu: Add python-openid. 
* gnu/packages/python.scm (python-openid): New variable.
 2017-02-13 22:29:52 +01:00
Ludovic Courtès 768f0ac9dd
Merge branch 'master' into core-updates 2017-02-10 17:40:25 +01:00
Muriithi Frederick Muriuki 8fd6850436
gnu: Add python2-ruamel.ordereddict. 
* gnu/packages/python.scm (python2-ruamel.ordereddict): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-02-09 23:41:24 +01:00
Muriithi Frederick Muriuki 2299b13738
gnu: Add python-pycosat. 
* gnu/packages/python.scm (python-pycosat, python2-pycosat): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-02-09 23:41:24 +01:00
Muriithi Frederick Muriuki 2f4623dbd8
gnu: Add python-ddt. 
* gnu/packages/python.scm (python-ddt, python2-ddt): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-02-09 23:41:23 +01:00
Muriithi Frederick Muriuki 1f42d824c1
gnu: Add python-flake8-polyfill. 
* gnu/packages/python.scm (python-flake8-polyfill, python2-flake8-polyfill):
New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-02-09 22:54:58 +01:00
Muriithi Frederick Muriuki 1a917fc9de
gnu: Add python-rst2ansi. 
* gnu/packages/python.scm (python-rst2ansi): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-02-09 22:54:58 +01:00
ng0 6bd9ad6942
gnu: python-dateutil-2: Update to 2.5.3. 
* gnu/packages/python.scm (python-dateutil-2): Update to 2.5.3.
 2017-02-08 08:33:16 +01:00
Leo Famulari e8c83d04e1
Merge branch 'master' into core-updates 2017-02-02 10:52:24 -05:00
Tobias Geerinckx-Rice 0bb1c35ac1
gnu: python-stem: Update to 1.5.4. 
* gnu/packages/python.scm (python-stem): Update to 1.5.4.
 2017-02-01 15:53:31 +01:00
宋文武 736cfc10f0
gnu: python-xdo: Hardcode the path of 'libxdo.so'. 
* gnu/packages/python.scm (python-xdo)[arguments]: Add 'patch-libxdo-path'
phase.
 2017-01-28 12:30:41 +08:00
宋文武 0b5e08637e
gnu: python-xdo: Add 'python-six' to 'propagated-inputs'. 
* gnu/packages/python.scm (python-xdo)[propagated-inputs]: New field.
 2017-01-28 12:02:34 +08:00
Tobias Geerinckx-Rice 5bbb224916
gnu: python-pbr: Update to 1.10.0. 
* gnu/packages/python.scm (python-pbr): Update to 1.10.0.
 2017-01-26 21:05:06 +01:00
Tobias Geerinckx-Rice 0e6df70b6a
gnu: python-wheel: Update to 0.30.0a0. 
* gnu/packages/python.scm (python-wheel): Update to 0.30.0a0.
 2017-01-26 21:05:05 +01:00
Tobias Geerinckx-Rice 60a8be3a56
gnu: awscli: Update to 1.11.43. 
* gnu/packages/python.scm (awscli): Update to 1.11.43.
[home-page]: Use HTTPS.
 2017-01-26 21:05:05 +01:00
Tobias Geerinckx-Rice 28576403af
gnu: python-certifi: Update to 2017.1.23. 
* gnu/packages/python.scm (python-certifi): Update to 2017.1.23.
[arguments]: Remove: run tests if they're ever added.
[home-page]: Fix or update.
 2017-01-26 21:05:04 +01:00
Tobias Geerinckx-Rice eff8d773d6
gnu: python-mistune: Fix source URI. 
* gnu/packages/python.scm (python-mistune)[source]: Use pypi-uri.
 2017-01-26 08:15:09 +01:00
Tobias Geerinckx-Rice 911a8fafb2
gnu: python-redis: Update to 2.10.5. 
* gnu/packages/python.scm (python-redis): Update to 2.10.5.
[source]: Use pypi-uri.
 2017-01-26 08:07:03 +01:00
Leo Famulari d123f2f991
Merge branch 'master' into core-updates 2017-01-25 12:42:39 -05:00
Danny Milosavljevic a282d7ff17
gnu: python-2.7: Enable UCS-4 Unicode encoding. 
* gnu/packages/python.scm (python-2.7)[arguments]: Modify.
 2017-01-25 11:55:10 +01:00
Marius Bakke 5e217a8b4b
gnu: python-debian: Fix URL. 
* gnu/packages/python.scm (python-debian)[source]: Use 'pypi-uri'.
 2017-01-25 01:11:57 +01:00
Tobias Geerinckx-Rice e80aaeb4ad
gnu: python2-pysqlite: Update to 2.8.3. 
* gnu/packages/python.scm (python2-pysqlite): Update to 2.8.3.
 2017-01-24 23:27:07 +01:00
Tobias Geerinckx-Rice 49d5e338d6
gnu: python-cov-core: Fix & improve synopsis & description. 
* gnu/packages/python.scm (python-cov-core)[synopsis]: Capitalise and add
‘coverage’ key-word.
[description]: Use @code.
 2017-01-24 23:27:07 +01:00
Tobias Geerinckx-Rice b165c215e1
gnu: python-email-validator: Update to 1.0.2. 
* gnu/packages/python.scm (python-email-validator): Update to 1.0.2.
 2017-01-24 23:27:06 +01:00
Tobias Geerinckx-Rice 08b813366e
gnu: python-mistune: Update to 0.7.3. 
* gnu/packages/python.scm (python-mistune): Update to 0.7.3.
 2017-01-24 23:27:06 +01:00
Tobias Geerinckx-Rice e6ace98d10
gnu: python-tabulate: Update to 0.7.7. 
* gnu/packages/python.scm (python-tabulate): Update to 0.7.7
 2017-01-24 23:27:05 +01:00
Tobias Geerinckx-Rice ba1731dac5
gnu: python-paste: Update to 2.0.3. 
* gnu/packages/python.scm (python-paste): Update to 2.0.3.
[arguments]: Re-enable tests.  They now pass even on Python 3.
[properties]: Remove.
(python2-paste): Use package-with-python2 directly now.
 2017-01-24 23:27:05 +01:00
Tobias Geerinckx-Rice 46e110cca5
gnu: python-colorama: Fix typo in synopsis. 
* gnu/packages/python.scm (python-colorama)[synopsis]: Capitalise.
 2017-01-24 23:27:05 +01:00
Tobias Geerinckx-Rice f92576f963
gnu: python-colorama: Update to 0.3.7. 
* gnu/packages/python.scm (python-colorama): Update to 0.3.7.
 2017-01-24 23:27:04 +01:00
Tobias Geerinckx-Rice 02d7f33705
gnu: python-debian: Update to 0.1.28. 
* gnu/packages/python.scm (python-debian): Update to 0.1.28.
 2017-01-24 23:27:04 +01:00
Tobias Geerinckx-Rice ccc1876210
gnu: python-seaborn: Update to 0.7.1. 
* gnu/packages/python.scm (python-seaborn): Update to 0.7.1.
 2017-01-24 23:27:04 +01:00
Tobias Geerinckx-Rice 5754fe9570
gnu: python-unidecode: Update to 0.04.20. 
* gnu/packages/python.scm (python-unidecode): Update to 0.04.20.
 2017-01-24 23:27:03 +01:00
Tobias Geerinckx-Rice 4418990d77
gnu: python-alembic: Update to 0.8.10. 
* gnu/packages/python.scm (python-alembic): Update to 0.8.10.
 2017-01-24 23:27:03 +01:00
Tobias Geerinckx-Rice 9e2802cb8d
gnu: python-orderedmultidict: Update to 0.7.11. 
* gnu/packages/python.scm (python-orderedmultidict): Update to 0.7.11.
 2017-01-24 23:27:03 +01:00
Carlo Zancanaro af7caada40
gnu: Add python2-slowaes. 
* gnu/packages/python.scm (python2-slowaes): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-01-22 13:40:48 +08:00
Carlo Zancanaro cba84a3805
gnu: Add python-qrcode. 
* gnu/packages/python.scm (python-qrcode, python2-qrcode): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-01-22 13:39:57 +08:00
Carlo Zancanaro 916aafa401
gnu: Add python-pbkdf2. 
* gnu/packages/python.scm (python-pbkdf2, python2-pbkdf2): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-01-22 13:39:23 +08:00
Marius Bakke a50e030141
gnu: python-scipy, python-matplotlib: Fix build after Sphinx update. 
* gnu/packages/python.scm (python-sphinx-1.2.3, python2-sphinx-1.2.3): New
variables.
(python-matplotlib)[native-inputs]: Change 'python-sphinx' to 'python-sphinx-1.2.3'.
(python2-matplotlib)[native-inputs]: New field.
(python-scipy)[native-inputs]: Change 'python-sphinx' to 'python-sphinx-1.2.3'.
(python2-scipy)[native-inputs]: New field.
 2017-01-20 20:18:07 +01:00
Marius Bakke db967b6462
gnu: python-scipy: Fix expression after changing to 'modify-phases'. 
This is a followup to 16ca6aaac8.

* gnu/packages/python.scm (python-scipy)[arguments]: Fix parens.
 2017-01-19 18:48:37 +01:00
Marius Bakke 16ca6aaac8
gnu: python-scipy: Use 'modify-phases' syntax. 
* gnu/packages/python.scm (python-scipy)[arguments]: Use 'modify-phases'.
 2017-01-19 16:59:28 +01:00
Danny Milosavljevic 7adb90311f
gnu: python-testtools: Update to 1.4.0. 
* gnu/packages/python.scm (python-testtools): Update to 1.4.0.
  [source]: Use pypi-uri.
  [arguments]: New field.
 2017-01-19 16:29:56 +01:00
Danny Milosavljevic d83d872259
gnu: Add python-dulwich. 
* gnu/packages/python.scm (python-dulwich, python2-dulwich): New variables.
 2017-01-19 15:34:46 +01:00
Danny Milosavljevic b585e36184
gnu: Add python-fastimport. 
* gnu/packages/python.scm (python-fastimport, python2-fastimport):
  New variables.
 2017-01-19 00:39:49 +01:00
Danny Milosavljevic c227458ac8
gnu: python-sphinx: Update to 1.5.1 and enable tests. 
* gnu/packages/python.scm (python-sphinx): Update to 1.5.1.
  [arguments]: New field.
  [native-inputs]: Add graphviz, python-html5lib, python-mock, python-nose,
  python-requests.
  (python2-sphinx)[native-inputs]: Add python2-enum34.
 2017-01-19 00:32:35 +01:00
Marius Bakke df893a3855
gnu: Add python-cram. 
* gnu/packages/python.scm (python-cram, python2-cram): New variables.
 2017-01-18 21:28:59 +01:00
Marius Bakke c9a1812527
gnu: Add python-geventhttpclient. 
* gnu/packages/python.scm (python-geventhttpclient, python2-geventhttpclient):
New variables.
 2017-01-18 00:20:39 +01:00
Marius Bakke d1ba1d6bfd
gnu: python-requests: Update to 2.12.4. 
* gnu/packages/python.scm (python-requests, python2-requests): Update to 2.12.4.
 2017-01-18 00:19:04 +01:00
Thomas Danckaert 138adbbe05
gnu: Add python-autopep8. 
* gnu/packages/python.scm (python-autopep8, python2-autopep8): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-16 22:13:21 +01:00
Danny Milosavljevic fdcbf10b70
gnu: python-matplotlib: Make sure that phases end with #t. 
* gnu/packages/python.scm (python-matplotlib)[arguments]:
  Make sure that phases end with #t.
 2017-01-14 22:35:42 +01:00
Danny Milosavljevic 84e0f8c1ed
gnu: python-matplotlib: Fix reST markup error. 
* gnu/packages/python.scm (python-matplotlib)[arguments]:
  Fix reST markup error.
 2017-01-14 22:07:04 +01:00
Danny Milosavljevic 42b7009a00
gnu: python-matplotlib: Use 'modify-phases' syntax. 
* gnu/packages/python.scm (python-matplotlib)[arguments]: Use 'modify-phases'.
 2017-01-14 22:03:54 +01:00
Leo Famulari 268e8ad87f
gnu: python-icalendar: Update to 3.11.2. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.2.
 2017-01-14 14:18:30 -05:00
Leo Famulari 1003fbcfc6
gnu: python2-dogtail: Fix typo in synopsis. 
* gnu/packages/python.scm (python2-dogtail)[synopsis]: Remove 'ZERO
WIDTH SPACE' (U+200B) character.
 2017-01-13 17:12:43 -05:00
Danny Milosavljevic 9a8acd00da
gnu: python-sphinx: Update to 1.4.8. 
* gnu/packages/python.scm (python-sphinx)[version]: Update to 1.4.8.
  [source]: Use pypi-uri.
  [propagated-inputs]: Add python-imagesize, python-sphinx-alabaster-theme,
  python-babel, python-snowballstemmer, python-six.
  [properties]: Add python2-variant.
  (python2-sphinx)[native-inputs]: Add python2-mock.
  [propagated-inputs]: Add python2-pytz.
 2017-01-13 22:58:54 +01:00
Leo Famulari cc0725914e
Merge branch 'master' into python-tests 2017-01-13 10:21:17 -05:00
Danny Milosavljevic 8d67610bdc
gnu: Add python2-cheetah 
* gnu/packages/python.scm (python2-cheetah): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-11 13:09:21 -05:00
Tobias Geerinckx-Rice d4acb6db2f
gnu: python-click: Update to 6.7. 
* gnu/packages/python.scm (python-click): Update to 6.7.
 2017-01-10 17:36:57 +01:00
Ludovic Courtès 022c977258
gnu: libgit2, python-pygit2: Update to 0.25.1 [security fixes]. 
See <http://www.openwall.com/lists/oss-security/2017/01/10/5>.

* gnu/packages/version-control.scm (libgit2): Update to 0.25.1.
* gnu/packages/python.scm (python-pygit2): Update to 0.25.0.
 2017-01-10 15:49:49 +01:00
Maxim Cournoyer 392c26b0d1
gnu: python-pip: Update to 9.0.1 
* gnu/packages/python.scm (python-pip): Update to 9.0.1.
[native-inputs]: Remove.
[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-09 15:55:57 +01:00
Tobias Geerinckx-Rice 9657aeb187
gnu: python-tblib: Properly @end enumerate. 
* gnu/packages/python.scm (python-tblib)[description]: Don't use
‘@end itemize’ to end an ‘@enumerate’ block.
 2017-01-07 00:23:53 +01:00
Leo Famulari aa21c764d6
gnu: python-pycrypto: Fix CVE-2013-7459. 
* gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto)[source]: Use the
patch. Use pypi-uri.
 2017-01-06 13:50:18 -05:00
Leo Famulari 491b78a8e8
gnu: python-icalendar: Update to 3.11.1. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.1.
 2017-01-06 03:19:36 -05:00
Marius Bakke 1bd858cc14
gnu: Fix indentation of some python packages. 
This is a followup to abe2ec73..807a5b32.

* gnu/packages/python.scm (python-snowballstemmer,
  python-sphinx-cloud-sptheme, python-sphinx-alabaster-theme): Fix indentation.
 2017-01-05 16:28:01 +01:00
Danny Milosavljevic 807a5b32bf
gnu: Add python-sphinx-alabaster-theme. 
* gnu/packages/python.scm (python-sphinx-alabaster-theme,
  python2-sphinx-alabaster-theme): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:27 +01:00
Danny Milosavljevic 754bfd7019
gnu: Add python-sphinx-cloud-sptheme. 
* gnu/packages/python.scm (python-sphinx-cloud-sptheme,
  python2-sphinx-cloud-sptheme): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:27 +01:00
Danny Milosavljevic 89cd988b6c
gnu: Add python-snowballstemmer. 
* gnu/packages/python.scm (python-snowballstemmer,
  python2-snowballstemmer): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-05 16:17:26 +01:00
Tobias Geerinckx-Rice 3b3b60d037
gnu: Use HTTPS for all sourceforge.net home pages. 
* gnu/packages/admin.scm (mingetty, clusterssh)[home-page]: Use HTTPS.
* gnu/packages/audio.scm (libbs2b, soxr)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (bless)[home-page]: Likewise.
* gnu/packages/display-managers.scm (slim)[home-page]: Likewise.
* gnu/packages/games.scm (extremetuxracer)[home-page]: Likewise.
* gnu/packages/ghostscript.scm (gs-fonts)[home-page]: Likewise.
* gnu/packages/haskell.scm (ghc-regex-base, ghc-regex-posix,
ghc-regex-compat)[home-page]: Likewise.
* gnu/packages/image.scm (imlib2)[home-page]: Likewise.
* gnu/packages/libreoffice.scm (librevenge, libcmis, libodfgen, libmwaw)
[home-page]: Likewise.
* gnu/packages/linux.scm (hdparm, acpid, libavc1394, rng-tools)
[home-page]: Likewise.
* gnu/packages/mail.scm (esmtp)[home-page]: Likewise.
* gnu/packages/mp3.scm (ripperx)[home-page]: Likewise.
* gnu/packages/onc-rpc.scm (libtirpc)[home-page]: Likewise.
* gnu/packages/perl.scm (perl-czplib)[home-page]: Likewise.
* gnu/packages/python.scm (python-pyasn1-modules)[home-page]: Likewise.
* gnu/packages/xdisorg.scm (xosd)[home-page]: Likewise.
 2017-01-04 05:14:22 +01:00
Leo Famulari 7637de2313
gnu: Add python-xdo. 
* gnu/packages/python.scm (python-xdo): New variable.
(python2-xdo): Use package-with-python2.
 2017-01-03 12:35:44 -05:00
Leo Famulari e871c332a0
gnu: python2-xdo: Update to 0.3. 
* gnu/packages/python.scm (python2-xdo): Update to 0.3.
 2017-01-03 12:35:44 -05:00
Tobias Geerinckx-Rice 1b5ea0922f
gnu: python-s3transfer: Update to 0.1.10. 
* gnu/packages/python.scm (python-s3transfer): Update to 0.1.10.
 2017-01-02 08:37:26 +01:00
Tobias Geerinckx-Rice 1f89fb1691
gnu: python-greenlet: Update to 0.4.11. 
* gnu/packages/python.scm (python-greenlet): Update to 0.4.11.
 2017-01-02 08:37:25 +01:00
Tobias Geerinckx-Rice 3753f2e6e9
gnu: python-mako: Update to 1.0.6. 
* gnu/packages/python.scm (python-mako): Update to 1.0.6.
 2017-01-02 08:37:25 +01:00
Tobias Geerinckx-Rice af27e845e1
gnu: awscli: Update to 1.11.35. 
* gnu/packages/python.scm (awscli): Update to 1.11.35.
 2017-01-02 08:37:24 +01:00
Tobias Geerinckx-Rice bbb99d6b37
gnu: python-werkzeug: Update to 0.11.15. 
* gnu/packages/python.scm (python-werkzeug): Update to 0.11.15.
 2017-01-02 08:37:23 +01:00
Tobias Geerinckx-Rice 27f9148e1d
gnu: python-backports-abc: Update to 0.5. 
* gnu/packages/python.scm (python-backports-abc): Update to 0.5.
 2017-01-02 08:37:23 +01:00
Tobias Geerinckx-Rice d79fa7da1b
gnu: python-decorator: Update to 4.0.10. 
* gnu/packages/python.scm (python-decorator): Update to 4.0.10.
 2017-01-02 08:37:22 +01:00
Tobias Geerinckx-Rice 819939cb94
gnu: python-pycparser: Use ‘modify-phases’ syntax. 
* gnu/packages/python.scm (python-pycparser)[arguments]: Use
‘modify-phases’.
 2017-01-02 08:37:21 +01:00
Tobias Geerinckx-Rice 5043b20dcd
gnu: python-pycparser: Update to 2.17. 
* gnu/packages/python.scm (python-pycparser): Update to 2.17.
 2017-01-02 08:28:28 +01:00
Leo Famulari 2e161eafd8
gnu: python-pyicu: Update to 1.9.5. 
* gnu/packages/python.scm (python-pyicu, python2-pyicu): Update to 1.9.5.
[source]: Use pypi-uri.
 2017-01-01 20:15:06 -05:00
Leo Famulari 7be13d0006
gnu: python-ndg-httpsclient: Use pypi-uri. 
* gnu/packages/python.scm (python-ndg-httpsclient, python2-ndg-httpsclient)
[source]: Use pypi-uri.
 2017-01-01 17:01:32 -05:00
Tobias Geerinckx-Rice b13a5b4d16
gnu: python-graphql-relay: Update to 0.4.5. 
* gnu/packages/python.scm (python-graphql-relay): Update to 0.4.5.
 2016-12-31 16:51:56 +01:00
Tobias Geerinckx-Rice 0c315fb394
gnu: python-freezegun: Update to 0.3.8. 
* gnu/packages/python.scm (python-freezegun): Update to 0.3.8.
 2016-12-31 16:51:56 +01:00
Tobias Geerinckx-Rice 234ade2d7b
gnu: python-ply: Update to 3.9. 
* gnu/packages/python.scm (python-ply): Update to 3.9.
[source]: Use pypi-uri.
 2016-12-31 16:51:55 +01:00
Tobias Geerinckx-Rice ab0c342924
gnu: python-pyquery: Update to 1.2.17. 
* gnu/packages/python.scm (python-pyquery): Update to 1.2.17.
 2016-12-31 16:51:55 +01:00
Tobias Geerinckx-Rice 42734b9a88
gnu: python-click-log: Update to 0.1.8. 
* gnu/packages/python.scm (python-click-log): Update to 0.1.8.
 2016-12-31 16:51:54 +01:00
Tobias Geerinckx-Rice ae476d01da
gnu: python-ndg-httpsclient: Update to 0.4.2. 
* gnu/packages/python.scm (python-ndg-httpsclient): Update to 0.4.2.
 2016-12-31 16:51:54 +01:00
Tobias Geerinckx-Rice f165648e1b
gnu: python-ipykernel: Update to 4.5.2. 
* gnu/packages/python.scm (python-ipykernel): Update to 4.5.2.
 2016-12-31 16:51:53 +01:00
Tobias Geerinckx-Rice 45cc957c72
gnu: python-jupyter-core: Update to 4.2.1. 
* gnu/packages/python.scm (python-jupyter-core): Update to 4.2.1.
 2016-12-31 16:51:53 +01:00
Tobias Geerinckx-Rice 594358f5b6
gnu: python2-fastlmm: Update to 0.2.26. 
* gnu/packages/python.scm (python2-fastlmm): Update to 0.2.26.
 2016-12-31 16:51:40 +01:00
Tobias Geerinckx-Rice a5f92ca04f
gnu: python-pytz: Update to 2016.10. 
* gnu/packages/python.scm (python-pytz): Update to 2016.10.
 2016-12-31 16:36:20 +01:00
Tobias Geerinckx-Rice bf5e4bc42a
gnu: python-pyyaml: Update to 3.12. 
* gnu/packages/python.scm (python-pyyaml): Update to 3.12.
[source]: Use pypi-uri.
 2016-12-31 15:27:24 +01:00
Tobias Geerinckx-Rice 7d2e758df5
gnu: python-pygments: Update to 2.1.3. 
* gnu/packages/python.scm (python-pygments): Update to 2.1.3.
 2016-12-31 15:27:23 +01:00
ng0 d5bbf806f3
gnu: Add python-trollius-redis. 
* gnu/packages/python.scm (python-trollius-redis, python2-trollius-redis): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:53 -05:00
ng0 789de5e279
gnu: Add python-straight-plugin. 
* gnu/packages/python.scm (python-straight-plugin, python2-straight-plugins):
New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:53 -05:00
ng0 a0e41de4ab
gnu: Add python-openid-teams. 
* gnu/packages/python.scm (python-openid-teams, python2-openid-teams): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:53 -05:00
ng0 03702173f1
gnu: Add python-openid-cla. 
* gnu/packages/python.scm (python-openid-cla, python2-openid-cla): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:52 -05:00
ng0 3ef00f5609
gnu: Add python2-openid. 
* gnu/packages/python.scm (python2-openid): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:52 -05:00
ng0 0151a8df22
gnu: Add python-pygit2. 
* gnu/packages/python.scm (python-pygit2, python2-pygit2): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:52 -05:00
ng0 460fccd4b3
gnu: Add python-munch. 
* gnu/packages/python.scm (python-munch, python2-munch): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:51 -05:00
ng0 9f21414de4
gnu: Add python-kitchen. 
* gnu/packages/python.scm (python-kitchen, python2-kitchen): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:51 -05:00
ng0 a2c7d88e74
gnu: Add python-flask-multistatic. 
* gnu/packages/python.scm (python-flask-multistatic, python2-flask-multistatic):
New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:51 -05:00
ng0 a7ad802be5
gnu: Add python-flask-wtf. 
* gnu/packages/python.scm (python-flask-wtf, python2-flask-wtf): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-28 22:41:45 -05:00
Tobias Geerinckx-Rice 6a34f4ccc8
gnu: python-prompt-toolkit: Update to 1.0.9. 
* gnu/packages/python.scm (python-prompt-toolkit): Update to 1.0.9.
 2016-12-29 02:38:21 +01:00
Tobias Geerinckx-Rice 791ac6a68d
gnu: python-markdown: Update to 2.6.7. 
* gnu/packages/python.scm (python-markdown): Update to 2.6.7.
 2016-12-29 02:38:20 +01:00
Tobias Geerinckx-Rice 2ee57340f4
gnu: python-numexpr: Update to 2.6.1. 
* gnu/packages/python.scm (python-numexpr): Update to 2.6.1.
 2016-12-29 02:38:20 +01:00
Tobias Geerinckx-Rice ffb1e98d74
gnu: python-babel: Update to 2.3.4. 
* gnu/packages/python.scm (python-babel): Update to 2.3.4.
 2016-12-29 02:38:20 +01:00
Thomas Danckaert ea8450c82a
gnu: Add python-netcdf4. 
* gnu/packages/python.scm (python-netcdf4, python2-netcdf4): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-12-27 16:30:59 +01:00
Leo Famulari 1194575b3c
gnu: python-pycrypto: Add TODO "removal" comment. 
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto): Add
comment.
 2016-12-26 19:51:54 -05:00
Leo Famulari 4de2a710a6
gnu: python-stem: Don't use python-pycrypto. 
Python-pycrypto is an optional dependency of python-stem. Python-pycrypto is
unmaintained [0] and contains an exploitable buffer overflow bug [1].

[0] https://github.com/dlitz/pycrypto/issues/173
[1] https://github.com/dlitz/pycrypto/issues/176

* gnu/packages/python.scm (python-stem, python2-stem)[propagated-inputs]: Remove
python-pycrypto.
 2016-12-26 19:51:49 -05:00
Leo Famulari c976b319fe
gnu: python-stem: Update to 1.5.3. 
* gnu/packages/python.scm (python-stem, python2-stem): Update to 1.5.3.
[source]: Update URL.
 2016-12-26 13:20:52 -05:00
Thomas Danckaert d205f895ca
gnu: Add python-hdf4. 
* gnu/packages/python.scm (python-hdf4, python2-hdf4): New variables.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
 2016-12-23 14:51:56 +01:00
Ricardo Wurmus 8e401ab6db
gnu: python-scikit-learn: Update to 0.18.1. 
* gnu/packages/python.scm (python-scikit-learn): Update to 0.18.1.
[arguments]: Remove special "check" phase.
[native-inputs]: Add python-cython.
 2016-12-22 13:19:20 +01:00
Tobias Geerinckx-Rice 361a2fcf8d
gnu: Add python-xopen. 
* gnu/packages/python.scm (python-xopen, python2-xopen): New variables.
 2016-12-19 20:33:31 +01:00
Hartmut Goebel 00e0ca7ccb
gnu: python-docutils: Update to 0.13.1 
* gnu/packages/python.scm(python-docutils): Update to 0.13.1.
[source]: Use pypi-uri.
 2016-12-18 16:31:35 +01:00
Marius Bakke ee94ca11a1
gnu: python-beautifulsoup4: Fix python2 variant. 
This is a followup to 5f37f0b66e.

* gnu/packages/python.scm (python-beautifulsoup4)[properties]: New
  field. Delay python2 variant.
 2016-12-16 16:15:41 +01:00
Marius Bakke 752eb9e0d8
gnu: python2-kombu: Disable tests. 
* gnu/packages/python.scm (python2-kombu)[arguments]: Set #:tests? #f.
 2016-12-16 15:33:13 +01:00
Marius Bakke 7c6bf660d8
gnu: python-pyopenssl: Enable tests. 
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl)[source]: Use it.
[arguments]: Replace 'check' with custom phase.
 2016-12-16 14:36:15 +01:00
Marius Bakke 329553482d
gnu: ptpython: Disable tests. 
* gnu/packages/python.scm (ptpython, ptpython2)[arguments]: Set #:tests? #f.
 2016-12-16 13:39:07 +01:00
Marius Bakke 52f622ef9f
gnu: python-sympy: Update to 1.0. 
* gnu/packages/python.scm (python-sympy, python2-sympy): Update to 1.0.
[propagated-inputs]: Add python-mpmath.
 2016-12-16 13:22:12 +01:00
Marius Bakke 58a35665d9
gnu: Add python-mpmath. 
* gnu/packages/python.scm (python-mpmath, python2-mpmath): New variables.
 2016-12-16 13:22:10 +01:00
Marius Bakke 154d207c43
gnu: python-apsw: Fix tests. 
* gnu/packages/python.scm (python-apsw, python2-apsw)[arguments]: Use
  'modify-phases'. Add installed PYTHONPATH before running tests.
 2016-12-16 02:45:49 +01:00
Marius Bakke 80ce42bdbf
gnu: python-argcomplete: Fix tests. 
* gnu/packages/python.scm (python-argcomplete,
  python2-argcomplete)[native-inputs]: Add python-pexpect and tcsh.
 2016-12-16 02:16:23 +01:00
Marius Bakke 58f5fae7c4
gnu: python-widgetsnbextension: Fix tests. 
* gnu/packages/python.scm (python-widgetsnbextension,
  python2-widgetsnbextension)[native-inputs]: Add python-certifi.
 2016-12-16 02:14:54 +01:00
Marius Bakke ed11804309
gnu: python-pexpect: Update to 4.2.1. 
* gnu/packages/python.scm (python-pexpect, python2-pexpect): Update to 4.2.1.
[source]: Use 'pypi-uri'.
[arguments]: Add 'prepare-tests' phase to patch paths and delete network test.
[native-inputs]: Add python-pytest, man-db and which.
[propagated-inputs]: Add python-ptyprocess.
 2016-12-16 02:10:58 +01:00
Marius Bakke 01fb9f6638
gnu: python-axolotl: Remove workaround for bug #20765. 
* gnu/packages/python.scm (python-axolotl, python2-axolotl)[arguments]:
Remove #:configure-flags.
 2016-12-16 01:07:41 +01:00
Marius Bakke 22d7360b16
gnu: Remove python-dateutil@1.5. 
* gnu/packages/python.scm (python-dateutil-2, python2-dateutil-2): Rename to ...
(python-dateutil, python2-dateutil): ... this. Remove 1.5 version.
(python-tzlocal, python2-tzlocal): Adjust variable name.
(python-rst.linker, python2-rst.linker): Likewise.
(pelican): Likewise.
(python-matplotlib, python2-matplotlib): Likewise.
(python-sqlalchemy-utils, python2-sqlalchemy-utils): Likewise.
(python-icalendar, python2-icalendar): Likewise.
(python-botocore, python2-botocore): Likewise.
(python-vobject, python2-vobject): Likewise.
(python-arrow, python2-arrow): Likewise.
(python-fake-factory, python2-fake-factory): Likewise.
(python-freezegun, python2-freezegun): Likewise.
(python-aniso8601, python2-aniso8601): Likewise.
* gnu/packages/jrnl.scm (jrnl): Likewise.
* gnu/packages/calendar.scm (limnoria): Likewise.
 2016-12-16 00:54:48 +01:00
Marius Bakke 59f74825d6
gnu: python-flask-restplus: Disable tests. 
* gnu/packages/python.scm (python-flask-restplus)[arguments]: Set #:tests? #f.
 2016-12-15 19:56:44 +01:00
Marius Bakke ad348f9f39
gnu: python-gridmap: Disable tests. 
* gnu/packages/python.scm (python-gridmap, python2-gridmap)[arguments]:
Set #:tests? #f.
 2016-12-15 19:50:12 +01:00
Marius Bakke 15c37077bc
gnu: python-hy: Fix test suite. 
* gnu/packages/python.scm (python-hy, python2-hy)[arguments]: Replace 'check'
phase with custom command.
[native-inputs]: Add python-coverage and python-nose.
 2016-12-15 19:49:06 +01:00
Marius Bakke 8653c1d557
gnu: python-py3status: Disable tests. 
* gnu/packages/python.scm (python-py3status)[arguments]: Set #:tests? #f.
 2016-12-15 19:09:18 +01:00
Marius Bakke 0a70200951
gnu: python-pyserial: Disable tests. 
* gnu/packages/python.scm (python-pyserial, python2-pyserial)[arguments]:
Set #:tests? #f.
 2016-12-15 18:42:22 +01:00
Marius Bakke 8bd5164b4a
gnu: python-pystache: Disable tests for python3 variant. 
* gnu/packages/python.scm (python-pystache)[arguments]: Disable tests.
[properties]: New field. Delay python2 variant.
(python2-pystache)[arguments]: Replace 'check' phase with custom command.
 2016-12-15 18:35:21 +01:00
Marius Bakke 4eb385fb33
gnu: python-pytest-xdist: Disable tests. 
* gnu/packages/python.scm (python-pytest-xdist,
  python2-pytest-xdist)[arguments]: Set #:tests? #f.
 2016-12-15 18:11:43 +01:00
Marius Bakke 444464ec28
gnu: python-rpy2: Fix tests. 
* gnu/packages/python.scm (python-rpy2, python2-rpy2)[arguments]: Replace
  check phase with custom post-install command.
 2016-12-15 17:55:36 +01:00
Marius Bakke 6f976df677
gnu: python-seaborn: Disable tests. 
* gnu/packages/python.scm (python-seaborn, python2-seaborn)[arguments]:
  Disable tests.
 2016-12-15 17:31:29 +01:00
Marius Bakke 35d56b7b60
gnu: python-sqlalchemy-utils: Disable tests. 
* gnu/packages/python.scm (python-sqlalchemy-utils,
  python2-sqlalchemy-utils)[arguments]: Set #:tests? #f.
  [native-inputs]: Add python-dateutil-2, python-flexmock, python-pcycopg2 and
  python-pytz.
 2016-12-15 17:26:42 +01:00
Marius Bakke c616b5d3b5
gnu: python-oauthlib: Fix tests. 
* gnu/packages/python.scm (python-oauthlib)[native-inputs]:
  Add python-mock.
(python2-oauthlib)[native-inputs]: Inherit python-mock.
 2016-12-15 16:50:15 +01:00
Marius Bakke 49910e6a7c
gnu: python-paramiko: Disable tests. 
* gnu/packages/python.scm (python-paramiko, python2-paramiko)[arguments]:
Set #:tests? #f.
 2016-12-15 14:01:27 +01:00
Marius Bakke 7917a13554
gnu: python-termstyle: Fix tests. 
* gnu/packages/python.scm (python-termstyle)[arguments]: Replace 'check' phase
with custom command.
 2016-12-15 13:17:29 +01:00
Marius Bakke a960e73fad
gnu: python-twisted: Disable tests. 
* gnu/packages/python.scm (python-twisted, python2-twisted)[arguments]:
Set #:tests? #f.
 2016-12-15 13:13:23 +01:00
Marius Bakke a74f9b12ae
gnu: python-zope-security: Disable tests. 
* gnu/packages/python.scm (python-zope-security,
  python2-zope-security)[arguments]: Set #:tests? #f.
  [native-inputs]: Add python-six.
 2016-12-15 12:45:26 +01:00
Marius Bakke 40bb8e07ae
gnu: python-zope-location: Disable tests. 
* gnu/packages/python.scm (python-zope-location,
  python2-zope-location)[arguments]: Set #:tests? #f.
 2016-12-15 12:42:39 +01:00
Marius Bakke 66b3aadb73
gnu: python-zope-proxy: Disable tests. 
* gnu/packages/python.scm (python-zope-proxy, python2-zope-proxy)[arguments]:
  Set #:tests? #f.
 2016-12-15 12:40:10 +01:00
Marius Bakke 7e8b1bfa4b
gnu: python-zope-configuration: Disable tests. 
* gnu/packages/python.scm (python-zope-configuration,
  python2-zope-configuration)[arguments]: Set #:tests? #f.
 2016-12-15 12:38:04 +01:00
Marius Bakke 22dba2eff9
gnu: python-zope-interface: Disable tests. 
* gnu/packages/python.scm (python-zope-schema,
  python2-zope-schema)[arguments]: Set #:tests? #f.
 2016-12-15 12:35:26 +01:00
Marius Bakke 385871e5f7
gnu: python-zope-testrunner: Disable tests. 
* gnu/packages/python.scm (python-zope-testrunner,
  python2-zope-testrunner)[arguments]: Set #:tests? #f.
 2016-12-15 12:12:13 +01:00
Marius Bakke 7b93d86670
gnu: snakemake: Update to 3.9.0. 
* gnu/packages/python.scm (snakemake): Update to 3.9.0.
[source]: Use 'pypi-uri'.
[arguments]: Disable tests.
[home-page]: Update.
 2016-12-15 10:12:38 +01:00
Marius Bakke 972cf9be52
gnu: python-ly: Disable tests. 
* gnu/packages/python.scm (python-ly): Set #:tests? #f.
 2016-12-15 10:02:41 +01:00
Marius Bakke 9026e6890a
gnu: python-scikit-image: Disable tests. 
* gnu/packages/python.scm (python-scikit-image,
  python2-scikit-image)[arguments]: Set #:tests? #f.
 2016-12-14 23:01:40 +01:00
Marius Bakke bfce8a344d
gnu: python-jedi: Disable tests. 
* gnu/packages/python.scm (python-jedi, python2-jedi)[arguments]: Disable
  tests.
  [native-inputs]: Add python-pytest.
 2016-12-14 22:59:56 +01:00
Marius Bakke 6145b60462
gnu: python-clint: Fix tests. 
* gnu/packages/python.scm (python-clint, python2-clint)[native-inputs]: Add
  python-pytest.
  [arguments]: Replace 'check' phase with custom command.
 2016-12-14 22:07:38 +01:00
Marius Bakke b7f3ea9532
gnu: python-fake-factory: Fix tests. 
* gnu/packages/python.scm (python-fake-factory,
  python2-fake-factory)[arguments]: Replace 'check' phase with custom command.
 2016-12-14 22:01:36 +01:00
Tobias Geerinckx-Rice 6b7877e12c
gnu: python-mock: Update source and home-page URIs. 
* gnu/packages/python.scm (python-mock)[source]: Use ‘pypi-uri’.
[home-page]: Replace dead Google Code home page.
 2016-12-14 21:59:39 +01:00
Marius Bakke f620311a39
gnu: python-pyaml: Fix tests. 
* gnu/packages/python.scm (python-pyaml, python2-pyaml)[native-inputs]: Add
  python-unidecode.
 2016-12-14 19:53:21 +01:00
Marius Bakke e912752567
gnu: python-inflection: Fix test requirements. 
* gnu/packages/python.scm (python-inflection,
  python2-inflection)[native-inputs]: Add python-pytest.
 2016-12-14 19:50:44 +01:00
Marius Bakke 877fdac9e3
gnu: python-botocore: Disable tests. 
* gnu/packages/python.scm (python-botocore, python2-botocore): Set #:tests? #f.
 2016-12-14 19:49:35 +01:00
Marius Bakke 52a75a83f9
gnu: python-jmespath: Fix tests. 
* gnu/packages/python.scm (python-jmespath, python2-jmespath)[native-inputs]:
  Add python-nose.
 2016-12-14 19:45:46 +01:00
Marius Bakke 1b6d7c3f3f
gnu: python2-fastlmm: Fix test requirements. 
* gnu/packages/python.scm (python2-fastlmm)[native-inputs]: Add python2-nose.
 2016-12-14 19:38:50 +01:00
Marius Bakke 27fab2bf65
gnu: python-cryptography: Update to 1.7.1. 
* gnu/packages/python.scm (python-cryptography, python2-cryptography): Update
  to 1.7.1.
  [arguments]: Remove field.
(python-cryptography-vectors, python2-cryptography-vectors): Update to 1.7.1.
 2016-12-14 19:12:14 +01:00
Marius Bakke 30e0229a17
gnu: python-pyopenssl: Disable tests. 
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl)[arguments]:
Set #:tests? #f.
[native-inputs]: Add python-pytest.
 2016-12-14 18:36:52 +01:00
Marius Bakke bd100c7112
gnu: python-hypothesis: Don't propagate test inputs. 
* gnu/packages/python.scm (python-hypothesis,
  python2-hypothesis)[propagated-inputs]: Move everything from here ...
  [native-inputs]: ... to here.
(python2-hypothesis)[native-inputs]: Append inherited native-inputs.
 2016-12-14 17:35:28 +01:00
Marius Bakke 497355dc09
gnu: python-nbconvert: Disable tests. 
* gnu/packages/python.scm (python-nbconvert, python2-nbconvert)[arguments]:
Set #:tests? #f.
[native-inputs]: Add python-pytest.
 2016-12-14 12:59:40 +01:00
Marius Bakke 63b02364aa
gnu: python-iso8601: Fix test dependencies. 
* gnu/packages/python.scm (python-iso8601, python2-iso8601)[native-inputs]:
  Add python-pytest.
 2016-12-14 12:47:22 +01:00
Marius Bakke a717e8a698
gnu: python-flake8-2.2.4: Disable tests. 
* gnu/packages/python.scm (python-flake8-2.2.4,
  python2-flake8-2.2.4)[arguments]: Set #:tests? #f.
 2016-12-14 11:40:25 +01:00
Marius Bakke 73e3060d57
gnu: python-pep8-1.5.7: Disable tests. 
* gnu/packages/python.scm (python-pep8-1.5.7, python2-pep8-1.5.7)[arguments]:
Set #:tests? #f.
 2016-12-14 11:21:50 +01:00
Marius Bakke 0d84e1ef22
gnu: python-pyflakes-0.8.1: Disable tests. 
* gnu/packages/python.scm (python-pyflakes-0.8.1,
  python2-pyflakes-0.8.1)[arguments]: Set #:tests? #f.
 2016-12-14 11:19:11 +01:00
Marius Bakke 90110ef956
gnu: python-testrepository: Disable tests. 
* gnu/packages/python.scm (python-testrepository, python2-testrepository):
Set #:tests? #f.
 2016-12-14 10:46:47 +01:00
Marius Bakke f6c1ef1804
gnu: python-fixtures: Fix test suite. 
* gnu/packages/python.scm (python-fixtures, python2-fixtures): Replace 'check'
  with custom phase.
  [native-inputs]: Add python-mock.
 2016-12-14 10:40:21 +01:00
Marius Bakke fb08c4fedc
gnu: python-psutil: Disable tests. 
* gnu/packages/python.scm (python-psutil, python2-psutil): Disable tests.
 2016-12-14 10:18:33 +01:00
Leo Famulari 9d3a15b496
gnu: python-sphinx-rtd-theme: Build with python-sphinx. 
* gnu/packages/python.scm (python-sphinx-rtd-theme,
python2-sphinx-rtd-theme)[propagated-inputs]: Add python-sphinx.
 2016-12-13 20:54:34 -05:00
Leo Famulari 2b9e4bead9
gnu: python-zope-schema: Build with python-zope-exceptions. 
* gnu/packages/python.scm (python-zope-schema,
python2-zope-schema)[propagated-inputs]: Add python-zope-schema.
 2016-12-13 20:54:29 -05:00
Marius Bakke a792e1aa8d
gnu: python-cairocffi: Disable tests. 
* gnu/packages/python.scm (python-cairocffi, python2-cairocffi)[arguments]:
Set #:tests? #f.
 2016-12-13 17:04:20 -05:00
Marius Bakke 6734c7bae3
gnu: python-cairocffi: Use 'modify-phases' syntax. 
* gnu/packages/python.scm (python-cairocffi)[arguments]: Use 'modify-phases'.
 2016-12-13 17:04:20 -05:00
Marius Bakke e2816ac72d
gnu: python-xcffib: Disable tests. 
* gnu/packages/python.scm (python-xcffib, python2-xcffib)[arguments]:
Set #:tests? #f.
 2016-12-13 17:04:20 -05:00
Marius Bakke c8cd850c87
gnu: python-xcffib: Use 'modify-phases' syntax. 
* gnu/packages/python.scm (python-xcffib)[arguments]: Use 'modify-phases'.
 2016-12-13 17:04:19 -05:00
Marius Bakke cff0ccf9dc
gnu: python-requests: Disable tests. 
* gnu/packages/python.scm (python-requests, python2-requests,
python-requests-2.7)[native-inputs]: Remove field.
[arguments]: New field. Set #:tests? #f.
 2016-12-13 17:04:19 -05:00
Marius Bakke 97be1bc231
gnu: python-click: Fix tests. 
* gnu/packages/python.scm (python-click, python2-click)[arguments]: Replace
'check' with custom phase.
[native-inputs]: Add python-pytest.
 2016-12-13 17:04:19 -05:00
Marius Bakke 3fe2c209e0
gnu: python-tornado: Disable tests. 
* gnu/packages/python.scm (python-tornado, python2-tornado)[arguments]:
Set #:tests? #f.
 2016-12-13 17:04:19 -05:00
Marius Bakke 03cb5f9edb
gnu: python-sphinx: Disable tests. 
* gnu/packages/python.scm (python-sphinx, python2-sphinx)[arguments]:
Set #:tests? #f.
 2016-12-13 17:04:18 -05:00
Marius Bakke 995cb99e4b
gnu: python-pygments: Disable tests. 
* gnu/packages/python.scm (python-pygments, python2-pygments)[arguments]:
Set #:tests? #f.
 2016-12-13 17:04:18 -05:00
Marius Bakke bd10e677d1
gnu: python-coverage: Disable tests. 
* gnu/packages/python.scm (python-coverage, python2-coverage)[arguments]:
Set #:tests? #f.
 2016-12-13 17:04:18 -05:00
Marius Bakke 4fd129ee86
gnu: python-six: Fix test dependencies. 
* gnu/packages/python.scm (python-six, python2-six)[native-inputs]: Add
python-py and python-pytest.
 2016-12-13 17:04:18 -05:00
Marius Bakke dcb0da7bff
gnu: python-py: Disable tests. 
* gnu/packages/python.scm (python-py, python2-py)[arguments]: Set #:tests? #f.
 2016-12-13 21:04:31 +01:00
Marius Bakke d660f7be6d
gnu: python-setuptools: Update to 31.0.0. 
* gnu/packages/python.scm (python-setuptools, python2-setuptools): Update to
31.0.0.
[source]: Use 'pypi-uri'.
[license]: Update for bundled libraries.
 2016-12-13 09:37:49 +01:00
Marius Bakke 4eb6ed28a3
gnu: python-html5lib: Add dependency on python-webencodings. 
* gnu/packages/python.scm (python-html5lib,
python2-html5lib)[propagated-inputs]: Add python-webencodings.
 2016-12-11 20:09:26 +01:00
Marius Bakke adbca19e83
gnu: Add python-webencodings. 
* gnu/packages/python.scm (python-webencodings, python2-webencodings): New
variables.
 2016-12-11 20:09:23 +01:00
Tobias Geerinckx-Rice 6c2e82bcb7
gnu: Add python-argcomplete. 
* gnu/packages/python.scm (python-argcomplete): New variable.
 2016-12-11 11:58:40 +01:00
Danny Milosavljevic 444a79b6fe
gnu: Add python-flask-restful-swagger. 
* gnu/packages/python.scm (python-flask-restful-swagger,
  python2-flask-restful-swagger): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-12-09 11:57:10 +01:00
Marius Bakke a14061aae6
gnu: python-html5lib: Update to 1.0b10 [fixes CVE-2016-{9909,9910}]. 
* gnu/packages/python.scm (python-html5lib, python2-html5lib): Update to 1.0b10.
 2016-12-08 13:55:46 +01:00
Danny Milosavljevic bb4b17064d
gnu: python-sqlalchemy-utils: Update to 0.32.11. 
* gnu/packages/python.scm (python-sqlalchemy-utils): Update to 0.32.11.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-12-07 18:51:46 +01:00
Danny Milosavljevic 1ed21519f7
gnu: Add python-sadisplay. 
* gnu/packages/python.scm (python-sadisplay, python2-sadisplay): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-12-07 14:20:46 +01:00
Hartmut Goebel 3a735ecf0e
gnu: python2-notebook: Fix build. 
* gnu/packages/python.scm (python2-notebook)[properties]: Add
python2-variant.
(python2-notebook)[native-packages] add python2-mock. [arguments] Add
phase "disable-test-case" for disabling a failing test. immediately
 2016-12-06 11:30:15 +01:00
Hartmut Goebel c4abbac349
gnu: python-ipython-genutils: Update description. 
* gnu/packages/python.scm (python-ipython-genutils)[description]: Add
deprecation note and TODO comment.
 2016-12-06 11:29:37 +01:00
Hartmut Goebel 4dbc8ec483
gnu: python-ipython: Update to 4.0.3 
* gnu/packages/python.scm (python-ipython, python2-ipython): Update to
version 4.0.3.
 2016-12-06 11:29:35 +01:00
Leo Famulari 8f35c03061
gnu: python-flask: Propagate python-click. 
* gnu/packages/python.scm (python-flask, python2-flask)[native-inputs]: Move
python-click to ...
[propagated-inputs]: ... here.
 2016-12-04 19:27:47 -05:00
Leo Famulari a6c4790567
gnu: python-cryptography: Update to 1.6. 
* gnu/packages/python.scm (python-cryptography, python2-cryptography): Update
to 1.6.
(python-cryptography-vectors, python2-cryptography-vectors): Update to 1.6.
 2016-12-03 02:39:09 -05:00
Hartmut Goebel b0aa6ede25
gnu: python-numpy: Fix inputs. 
This fixes 2efabc5589, where some inputs
have been changed to propagated-inputs, but the propagated-inputs are
still extended from inputs and the inputs are not extended at all.

* gnu/packages/python.scm (python-numpy, python2-numpy)[inputs]:
Extend from python-numpy-bootstrap's package-inputs. [propagated-inputs]:
Extend from python-numpy-bootstrap's package-propagated-inputs.
 2016-12-02 18:07:36 +01:00
Hartmut Goebel 77a6932adf
gnu: python2-ipython: Fix inputs. 
This fixes e62600feb6, where the inputs
have been changed to native-inputs, but still extended from inputs.

* gnu/packages/python.scm (python2-ipython)[native-inputs]: Extend
from python-ipython's package-native-inputs.
 2016-12-02 18:07:36 +01:00
Hartmut Goebel fe4a8da445
gnu: python-numpydoc: Correct inputs. 
This does what 213d1745c6 was
supposed to do.

* gnu/packages/python.scm (python-numpydoc, python-numpydoc)
Change first of the duplicate [native-inputs] definitions to
[propagated-inputs].
 2016-12-02 18:07:36 +01:00
Hartmut Goebel 3bf4280659
Merge branch 'master' into python-build-system 2016-11-29 18:47:16 +01:00
Leo Famulari 6782444764
gnu: python-rarfile: Update to 2.8. 
* gnu/packages/python.scm (python-rarfile, python2-rarfile): Update to 2.8.
[source]: Remove obsolete patch.
* gnu/packages/patches/python-rarfile-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-27 14:49:35 -05:00
Leo Famulari 8c4964dd51
gnu: python-jellyfish: Update to 0.5.6. 
* gnu/packages/python.scm (python-jellyfish, python2-jellyfish): Update to
0.5.6.
 2016-11-27 14:49:35 -05:00
Leo Famulari 38e81a2c55
gnu: python-munkres: Update to 1.0.8. 
* gnu/packages/python.scm (python-munkres, python2-munkres): Update to 1.0.8.
 2016-11-27 14:49:34 -05:00
Danny Milosavljevic 7574cecf0f
gnu: python2-flask: Pick up python-flask's native-inputs. 
* gnu/packages/python.scm (python2-flask)[native-inputs]:
  Pick up python-flask's native-inputs.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-27 13:23:53 +01:00
Danny Milosavljevic c6c80104ab
gnu: python-flask: Update to 0.11.1. 
* gnu/packages/python.scm (python-flask): Update to 0.11.1.
[native-inputs]: Add python-click.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 16:35:07 +01:00
Danny Milosavljevic 61684de287
gnu: python-pyopenssl: Update to 16.2.0. 
* gnu/packages/python.scm (python-pyopenssl): Update to 16.2.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 16:35:07 +01:00
Danny Milosavljevic b2e6e150aa
gnu: python-simplejson: Update to 3.10.0. 
* gnu/packages/python.scm (python-simplejson): Update to 3.10.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 16:35:07 +01:00
Julien Lepiller d3eff97afd
gnu: Add python-polib. 
* gnu/packages/python.scm (python-polib, python2-polib): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 10:29:29 +01:00
Leo Famulari c415f76302
gnu: python-betamax: Fix typo. 
* gnu/packages/python.scm (python-betamax): Fix typo.
 2016-11-25 11:31:43 -05:00
Leo Famulari de32aa74b4
Merge branch 'master' into python-build-system 2016-11-25 11:20:21 -05:00
Leo Famulari 1c9f78eca1
gnu: python-passlib: Update to 1.7.0. 
* gnu/packages/python.scm (python-passlib, python2-passlib): Update to 1.7.0.
 2016-11-23 14:38:05 -05:00
Christopher Allan Webber 8957af324b
gnu: python-pyld: Update to 0.7.1. 
* gnu/packages/python.scm (python-pyld): Update to 0.7.1.
 2016-11-22 15:29:33 -06:00
Leo Famulari 25291aca74
gnu: python-icalendar: Update to 3.11. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.
 2016-11-20 11:22:27 -05:00
ng0 ed3fee5f7b
gnu: python-pafy: Disable tests. 
* gnu/packages/python.scm (python-pafy): Disable tests.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-18 15:16:48 -05:00
Hartmut Goebel d46491779e
gnu: python-awscli: fix inputs. 
* gnu/packages/python.scm (python-awscli): [inputs] change to
  [native-inputs].
 2016-11-15 22:36:22 +01:00
Hartmut Goebel 8fa6890b6c
gnu: python-botocore: fix inputs. 
* gnu/packages/python.scm (python-botocore): [inputs] change to
  [native-inputs].
 2016-11-15 22:36:21 +01:00
Hartmut Goebel 05e2e4cf00
gnu: python-pip: fix inputs. 
* gnu/packages/python.scm (python-pip): [inputs] change to
  [native-inputs].
 2016-11-15 22:36:21 +01:00
Hartmut Goebel e62600feb6
gnu: python2-ipython: fix inputs. 
* gnu/packages/python.scm (python2-ipython): [inputs] change to
  [native-inputs].
 2016-11-15 22:36:20 +01:00
Hartmut Goebel 5b1416d983
gnu: python-betamax: fix inputs. 
* gnu/packages/python.scm (python-betamax): [inputs] change to
  [propagated-inputs].
 2016-11-15 22:36:19 +01:00
Hartmut Goebel 1b5241c515
gnu: python-scikit-learn: Remove useless property "python2-variant". 
The Python 2 packages does not change the definition, thus the
propery is useless.

* gnu/packages/python.scm (python-scikit-learn): [properties]:
  Remove  "python2-variant". (python2-scikit-learn): Remove
  now needless "strip-python2-variant".
 2016-11-15 22:36:18 +01:00
Hartmut Goebel bac23672ee
gnu: python-tables: Remove python byte-code files from source. 
* gnu/packages/python.scm (python-tables)[source]: Add snippet.
 2016-11-15 22:36:18 +01:00
Hartmut Goebel b9c8ccce04
gnu: python-flake8-2.2.4: Remove python byte-code files from source. 
* gnu/packages/python.scm (python-flake8-2.2.4)[source]: Add snippet.
 2016-11-15 22:36:17 +01:00
Hartmut Goebel 011271c769
gnu: python-flake8: Remove python byte-code files from source. 
* gnu/packages/python.scm (python-flake8)[source]: Add snippet.
 2016-11-15 22:36:09 +01:00
Hartmut Goebel 632735f215
gnu: python-testlib: Remove useless self-defined phase "unpack". 
Unzipping is now done by standard-phase "unpack" automatically.

* gnu/packages/python.scm (python-testlib, python2-testlib)[phases] No longer
  replace "unpack".
 2016-11-15 22:31:59 +01:00
Hartmut Goebel 251ed7f2fe
gnu: python-sphinxcontrib-newsfeed: Remove needless input. 
* gnu/packages/python.scm (python-sphinxcontrib-newsfeed) [propagated-inputs]:
  Remove python-docutils, already porpagated by python-sphinx.
 2016-11-15 22:31:58 +01:00
Hartmut Goebel 38ceb106bd
gnu: python-nautilus: Correct inputs 
* gnu/packages/python.scm(python-nautilus, python2-nautilus):
  [propagated-inputs] remove python-graphql-core, python-graphql-relay,
  python-requests: not listed and already propagated by others. Remove
  pycparser: not listed, not used in source. Move python-nose2 to
  [native-inputs] (used for tests only).
 2016-11-15 22:31:57 +01:00
Hartmut Goebel 4e0969686c
gnu: python-freezegun: Correct input. 
* u/packages/python.scm(python-freezegun)[native-inputs] move
  python-dateutils-2 to [propagated-inputs].
 2016-11-15 22:31:56 +01:00
Hartmut Goebel fd1d6de729
gnu: python-consul: Correct inputs. 
* gnu/packages/python.scm(python-consul)[native-inuts] move python-requests
  and python-six to [propagated-inputs].
 2016-11-15 22:31:55 +01:00
Hartmut Goebel 2c199b5527
gnu: python-prompt-toolkit: Correct inputs 
* gnu/packages/python.scm(python-prompt-toolkit)[native-inputs] move
  python-six to [propagated-inputs]. Remove now empty [native-inputs].
 2016-11-15 22:31:55 +01:00
Hartmut Goebel d8ea5f2f27
gnu: python-responses: Correct inputs 
* gnu/packages/python.scm(python-responses)[native-inputs] move python-cookies
  to [propagated-inputs]
 2016-11-15 22:31:54 +01:00
Hartmut Goebel a0a0985978
gnu: python-sphinxcontrib-programoutput: Remove needless input. 
This is an indirect requirement and propagated by python-sphinx already.

* gnu/packages/python.scm(python-sphinxcontrib-programoutput)
  [propagated-inputs]: Remove python-docutils.
 2016-11-15 22:31:53 +01:00
Hartmut Goebel 47c7dc4a3f
gnu: python-sphinx-repoze-autointerface: Remove needless input. 
This is an indirect requirement and propagated by python-sphinx already.

* gnu/packages/python.scm(python-sphinx-repoze-autointerface)
  [propagated-inputs]: Remove python-docutils.
 2016-11-15 22:31:52 +01:00
Hartmut Goebel 06f1d73ed4
gnu: python-celery: Remove needless inputs. 
These are indirect requirements and propagated by python-kombu.

* gnu/packages/python.scm(python-celery)[propagated-inputs] Remove python-amqp
  and python-anyjson.
 2016-11-15 22:31:51 +01:00
Hartmut Goebel f7989b8bb0
gnu: Remove some outdated comments. 
These comments were about setuptools used at runtime for pkg_resources.

* gnu/packages/python.scm: Remove some outdated comments.
 2016-11-15 22:31:50 +01:00
Hartmut Goebel 7ba07edfb1
gnu: python-tox: Update FIXME comments. 
* gnu/packages/python.scm(python-tox)[arguments]: Update FIXME
  comment. [inputs]: Add FIXME comment.
 2016-11-15 22:31:49 +01:00