b43a9eb361
gnu: bedops: Update to 2.4.33.
...
* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.33.
2018-04-27 01:11:57 +02:00
c829c5ea85
gnu: samtools: Update to 1.8.
...
* gnu/packages/bioinformatics.scm (samtools): Update to 1.8.
2018-04-27 01:11:47 +02:00
cbd9f91c32
gnu: bcftools: Update to 1.8.
...
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.8.
* gnu/local.mk: Remove patch.
* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: Remove file.
2018-04-27 01:11:42 +02:00
8df0267ad4
gnu: htslib: Update to 1.8.
...
* gnu/packages/bioinformatics.scm (htslib): Update to 1.8.
2018-04-27 01:11:24 +02:00
16ef3368da
gnu: PackageKit: Update to 1.1.10 [fixes CVE-2018-1106].
...
* gnu/packages/freedesktop.scm (packagekit): Update to 1.1.10.
2018-04-26 16:10:54 -04:00
1f22a544c2
gnu: emacs-magit-popup: Update to 2.12.3.
...
* gnu/packages/emacs.scm (emacs-magit-popup): Update to 2.12.3.
2018-04-26 23:03:51 +03:00
cec021d16a
gnu: emacs-with-editor: Update to 2.7.2.
...
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.7.2.
2018-04-26 23:03:51 +03:00
e9c3a780d1
gnu: geiser: Update to 0.10.
...
* gnu/packages/emacs.scm (geiser): Update to 0.10.
2018-04-26 23:03:51 +03:00
205044b9c1
gnu: python-josepy: Update to 1.1.0.
...
* gnu/packages/python-crypto.scm (python-josepy, python2-josepy): Update
to 1.1.0.
2018-04-26 15:41:40 -04:00
d1f1a7a0b1
gnu: python-qrcode: Update to 6.0.
...
* gnu/packages/python.scm (python-qrcode): Update to 6.0.
2018-04-26 21:09:00 +02:00
c10176649f
gnu: python2-pathlib2: Update to 2.3.2.
...
* gnu/packages/python.scm (python2-pathlib2): Update to 2.3.2.
2018-04-26 21:09:00 +02:00
5cf24cde18
gnu: python-rst.linker: Update to 1.9.
...
* gnu/packages/python.scm (python-rst.linker): Update to 1.9.
2018-04-26 21:09:00 +02:00
9052324d72
gnu: python-sphinx@1.6: Update to 1.6.4.
...
* gnu/packages/python.scm (python-sphinx-1.6): Update to 1.6.4.
2018-04-26 21:09:00 +02:00
ebf09e77dc
gnu: python-ndg-httpsclient: Update to 0.5.0.
...
* gnu/packages/python-web.scm (python-ndg-httpsclient): Update to 0.5.0.
2018-04-26 21:08:59 +02:00
9616e86aa0
gnu: r-ztable: Update to 0.1.8.
...
* gnu/packages/statistics.scm (r-ztable): Update to 0.1.8.
2018-04-26 21:08:59 +02:00
9b4d3c1d02
gnu: r-sn: Update to 1.5-2.
...
* gnu/packages/statistics.scm (r-sn): Update to 1.5-2.
2018-04-26 21:08:59 +02:00
442ce03acc
gnu: r-sourcetools: Update to 0.1.7.
...
* gnu/packages/statistics.scm (r-sourcetools): Update to 0.1.7.
2018-04-26 21:08:59 +02:00
5e517e9b98
gnu: python-html5-parser: Update to 0.4.5.
...
* gnu/packages/python-web.scm (python-html5-parser): Update to 0.4.5.
2018-04-26 21:08:58 +02:00
a4d8b386ac
gnu: mg: Update to 20180408.
...
* gnu/packages/text-editors.scm (mg): Update to 20180408.
[source]: Switch from discontinued proper releases to a git tag.
2018-04-26 21:08:58 +02:00
11edb2474c
gnu: mg: Find ncurses through pkg-config.
...
* gnu/packages/text-editors.scm (mg)[arguments]: Remove explicit
‘CURSES_LIBS=-lncurses’ setting from #:make-flags.
2018-04-26 21:08:58 +02:00
1cc3e26b6a
gnu: fio: Use INVOKE.
...
* gnu/packages/benchmark.scm (fio)[arguments]: Substitute INVOKE for
SYSTEM* and end phase with explicit #t.
2018-04-26 21:08:58 +02:00
d2caedf08d
gnu: ghostwriter: Update to 1.6.2.
...
* gnu/packages/text-editors.scm (ghostwriter): Update to 1.6.2.
2018-04-26 21:08:58 +02:00
3b8064734e
gnu: youtube-viewer: Update to 3.3.4.
...
* gnu/packages/video.scm (youtube-viewer): Update to 3.3.4.
2018-04-26 21:08:57 +02:00
a3cbd75bb3
gnu: openvpn: Update to 2.4.6.
...
* gnu/packages/vpn.scm (openvpn): Update to 2.4.6.
2018-04-26 21:08:57 +02:00
b6617a1ed8
gnu: perl-text-glob: Update to 0.11.
...
* gnu/packages/perl.scm (perl-text-glob): Update to 0.11.
2018-04-26 21:08:57 +02:00
4e7ec8c06e
gnu: perl-task-weaken: Update to 1.06.
...
* gnu/packages/perl.scm (perl-task-weaken): Update to 1.06.
2018-04-26 21:08:57 +02:00
4f1f1592a6
gnu: perl-module-find: Update to 0.13.
...
* gnu/packages/perl.scm (perl-module-find): Update to 0.13.
2018-04-26 21:08:56 +02:00
dbfbe2b0c8
gnu: perl-mime-types: Update to 2.17.
...
* gnu/packages/perl.scm (perl-mime-types): Update to 2.17.
2018-04-26 21:08:56 +02:00
4844ccb2fe
gnu: perl-file-sharedir-install: Update to 0.12.
...
* gnu/packages/perl.scm (perl-file-sharedir-install): Update to 0.12.
2018-04-26 21:08:56 +02:00
39a915c2bf
gnu: perl-devel-overloadinfo: Update to 0.005.
...
* gnu/packages/perl.scm (perl-devel-overloadinfo): Update to 0.005.
2018-04-26 21:08:56 +02:00
ff8b52bad9
gnu: perl-class-inspector: Update to 1.32.
...
* gnu/packages/perl.scm (perl-class-inspector): Update to 1.32.
2018-04-26 21:08:55 +02:00
ea1db49a89
gnu: perl-file-find-rule: Update to 0.34.
...
* gnu/packages/perl.scm (perl-file-find-rule): Update to 0.34.
2018-04-26 21:08:55 +02:00
8c8771c375
gnu: perl-error: Update to 0.17025.
...
* gnu/packages/perl-.scm (perl-error): Update to 0.17025.
2018-04-26 21:08:55 +02:00
41b937cd5f
gnu: perl-test-simple: Update to 1.302136.
...
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302136.
2018-04-26 21:08:55 +02:00
8cb722028c
gnu: perl-test-output: Update to 1.031.
...
* gnu/packages/perl-check.scm (perl-test-output): Update to 1.031.
2018-04-26 21:08:54 +02:00
23da2107f9
gnu: perl-test-differences: Update to 0.64.
...
* gnu/packages/perl-check.scm (perl-test-differences): Update to 0.64.
2018-04-26 21:08:54 +02:00
cb6fb537dd
gnu: perl-test-pod: Update to 1.52.
...
* gnu/packages/perl-check.scm (perl-test-pod): Update to 1.52.
2018-04-26 21:08:54 +02:00
79a9dee62d
gnu: perl-test-base: Update to 0.89.
...
* gnu/packages/perl-check.scm (perl-test-base): Update to 0.89.
2018-04-26 21:08:54 +02:00
379848ed31
gnu: zsh: Update to 5.5.1.
...
* gnu/packages/shells.scm (zsh): Update to 5.5.1.
[source]: Remove obsolete patches.
* gnu/packages/patches/zsh-CVE-2018-7548.patch,
gnu/packages/patches/zsh-CVE-2018-7549.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-04-26 15:06:03 -04:00
2690b6ce7d
gnu: Add libpfm4.
...
* gnu/packages/linux.scm (libpfm4): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-26 16:10:30 +02:00
25637b770e
gnu: Add psm2.
...
* gnu/packages/linux.scm (psm2): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-26 16:10:30 +02:00
28cae33891
gnu: perl@5.26.2: Don't export variable.
...
This prevents it from ending up in user profiles, which would fail due to
wrong search paths as reported in <https://bugs.gnu.org/31216#43 >.
* gnu/packages/perl.scm (perl-5.26.2): Use DEFINE instead of DEFINE-PUBLIC.
2018-04-26 12:52:45 +02:00
90a8ef8c43
gnu: qemu: Enable GTK3 frontend.
...
* gnu/packages/virtualization.scm (qemu)[native-inputs]: Add "gettext" to native-inputs.
[inputs]: Add "gtk+" to inputs.
* gnu/packages/virtualization.scm (qemu-minimal)[native-inputs]: Remove "gettext"
from inherited inputs.
[inputs]: Remove "gtk+" from inherited inputs.
2018-04-26 12:45:57 +02:00
27b52c1f6a
gnu: qemu: Build with Python 3 and SDL2 support.
...
* gnu/packages/bootloaders.scm (qemu-minimal-2.10): Remove variable.
* gnu/packages/virtualization.scm (qemu)[inputs]: Use sdl2 instead of sdl.
[native-inputs]: Use python-wrapper instead of python@2.
* gnu/packages/virtualization.scm (qemu-minimal)[inputs]: Remove sdl2 instead of
sdl from inherited packages.
* gnu/packages/virtualization.scm (qemu-minimal-2.10): Add variable.
[native-inputs]: Remove python-wrapper from inherited packages and use python@2
instead.
* gnu/packages/debug.scm (american-fuzzy-lop): Inherit from moved hidden-package
qemu-minimal-2.10.
2018-04-26 12:45:57 +02:00
87bcd9bf65
gnu: evince: Update to 3.28.2.
...
* gnu/packages/gnome.scm (evince): Update to 3.28.2.
2018-04-26 11:04:11 +02:00
5fa88cc466
gnu: gnome-disk-utility: Update to 3.28.1.
...
* gnu/packages/gnome.scm (gnome-disk-utility): Update to 3.28.1.
2018-04-26 09:58:30 +02:00
c7fc414e1e
gnu: gnome-tweak-tool: Update to 3.26.4.
...
* gnu/packages/gnome.scm (gnome-tweak-tool): Update to 3.26.4.
[arguments]: Replace 'configure, 'build, 'check and 'install phases with Meson
build phases.
[native-inputs]: Add "gtk+:bin", "meson" and "ninja".
[inputs]: Add "nautilus." Replace "python@2" with "python" and
"python2-pygobject" with "python-pygobject".
2018-04-26 09:51:26 +02:00
dcf3ab6ab3
gnu: enlightenment: Update to 0.22.3.
...
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.22.3.
2018-04-26 10:23:58 +03:00
5e94ce9794
gnu: terminology: Update to 1.2.0.
...
* gnu/packages/enlightenment.scm (terminology): Update to 1.2.0.
[source]: Update source snippet.
[build-system]: Switch to meson-build-system.
[native-inputs]: Add perl.
2018-04-26 10:23:58 +03:00
dce50fbc91
gnu: retroarch: Fix hash.
...
* gnu/packages/emulators.scm (retroarch): Fix incorrect hash.
2018-04-26 08:54:04 +02:00
Roel Janssen