Commit Graph

35616 Commits (1a3f4684a533340c52f8c31f633a8302652e8874)

Author SHA1 Message Date
Ricardo Wurmus 704de8f5ee
gnu: Add r-ihw.
* gnu/packages/bioconductor.scm (r-ihw): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 2cb71d81a4
gnu: Add r-lpsymphony.
* gnu/packages/bioconductor.scm (r-lpsymphony): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 3087a2f37b
gnu: Add r-ebseq.
* gnu/packages/bioconductor.scm (r-ebseq): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 7ed869f796
gnu: Add r-nbpseq.
* gnu/packages/bioconductor.scm (r-nbpseq): New variable.
2019-03-13 13:17:51 +01:00
Nicolas Goaziou 2b6ab17f7d
gnu: wireshark: Update to 3.0.0.
* gnu/packages/networking.scm (wireshark): Update to 3.0.0.
2019-03-13 12:31:13 +01:00
Tomáš Čech 77f3d30364
gnu: python-py3status: Update to 3.16.
* gnu/packages/python-xyz.scm (python-py3status): Update to 3.16.
2019-03-13 10:06:19 +01:00
Jack Hill 2f041a4cef
gnu: r-minpack-lm: Fix typo in description.
* gnu/packages/cran.scm (r-minpack-lm)[description]: Fix typo.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-13 00:37:11 -04:00
Nicolas Goaziou 0d5101c3a3
gnu: rosegarden: Update to 18.12.
* gnu/packages/music.scm (rosegarden): Update to 18.12.
[arguments]: Remove unused flag.
2019-03-12 23:58:52 +01:00
Nicolas Goaziou a269c89457
gnu: musescore: Update to 3.0.5.
* gnu/packages/music.scm (musescore): Update to 3.0.5.
2019-03-12 23:58:52 +01:00
Ludovic Courtès c9c51ac39a
Revert "packages: 'package-input-rewriting' can take a promise."
This reverts commit 7d2be1277b, which
turned out to be unhelpful for the problem at hand:

  https://lists.gnu.org/archive/html/guix-devel/2019-01/msg00486.html
2019-03-12 23:51:32 +01:00
Ricardo Wurmus 29e76f0722
gnu: guile-stis-parser: Override source file name.
* gnu/packages/guile-xyz.scm (guile-stis-parser)[source]: Provide file name
for git checkout.
2019-03-12 22:48:40 +01:00
Ricardo Wurmus 173c99601a
gnu: Add r-deds.
* gnu/packages/bioconductor.scm (r-deds): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 5570804a69
gnu: Add r-zim.
* gnu/packages/cran.scm (r-zim): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus be0777ba86
gnu: Add r-penalized.
* gnu/packages/cran.scm (r-penalized): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 4d1f19e02c
gnu: Add r-nonnest2.
* gnu/packages/cran.scm (r-nonnest2): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus ca3f13704a
gnu: Add r-lavaan.
* gnu/packages/cran.scm (r-lavaan): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus e8be5a0098
gnu: Add r-pbivnorm.
* gnu/packages/cran.scm (r-pbivnorm): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 9e2ff342aa
gnu: Add r-msir.
* gnu/packages/cran.scm (r-msir): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 01fe44cbdc
gnu: Add r-moments.
* gnu/packages/cran.scm (r-moments): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 4fd994432f
gnu: Add r-minpack-lm.
* gnu/packages/cran.scm (r-minpack-lm): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 061a4b6850
gnu: Add r-gamlss-dist.
* gnu/packages/cran.scm (r-gamlss-dist): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus c60e3e10f3
gnu: Add r-drimpute.
* gnu/packages/cran.scm (r-drimpute): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 5f673e2c1c
gnu: Add r-cobs.
* gnu/packages/cran.scm (r-cobs): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 5fde35b385
gnu: Add r-compositions.
* gnu/packages/cran.scm (r-compositions): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 7d779142ab
gnu: Add r-rarpack.
* gnu/packages/cran.scm (r-rarpack): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 262ab4b17c
gnu: Add r-tensora.
* gnu/packages/cran.scm (r-tensora): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 8cd3f49d46
gnu: Add r-bayesm.
* gnu/packages/cran.scm (r-bayesm): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 1901a53241
gnu: Add r-outliers.
* gnu/packages/cran.scm (r-outliers): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 4af186a963
gnu: Add r-upsetr.
* gnu/packages/cran.scm (r-upsetr): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus f3233beec5
gnu: Add r-blockmodeling.
* gnu/packages/cran.scm (r-blockmodeling): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus c691c607d7
gnu: Add r-dorng.
* gnu/packages/cran.scm (r-dorng): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 4dc2ecc279
gnu: r-qvalue: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-qvalue): Move from here...
* gnu/packages/bioconductor.scm (r-qvalue): ...to here.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 557a1089c6
gnu: Add r-hsmmsinglecell.
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 12d73f9c3c
gnu: Add guile-persist.
* gnu/packages/guile-xyz.scm (guile-persist): New variable.
2019-03-12 22:47:56 +01:00
Oleg Pykhalov e80a809f1f
gnu: Add tmux-xpanes.
* gnu/packages/tmux.scm (tmux-xpanes): New variable.
2019-03-12 22:41:31 +03:00
Brian Leung 94a33ab899
gnu: Add emacs-eshell-bookmark.
* gnu/packages/emacs-xyz.scm (emacs-eshell-bookmark): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-03-12 21:56:09 +03:00
Julien Lepiller 2ffec22eeb
gnu: python-pygit2: Update to 0.27.4.
* gnu/packages/python-xyz.scm (python-pygit2): Update to 0.27.4.
(python-pygit2)[arguments]: Disable tests.
2019-03-12 18:56:34 +01:00
Efraim Flashner 7458ceaca8
gnu: inxi-minimal: Declare source-file-name.
* gnu/packages/admin.scm (inxi-minimal)[source]: Add missing field.
2019-03-12 17:29:19 +02:00
Tobias Geerinckx-Rice 49fb2d0922
gnu: inxi-minimal: Update to 3.0.22-1.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.22-1.
2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice 17ab1e43a6
gnu: perl-anyevent: Update to 7.15.
* gnu/packages/libevent.scm (perl-anyevent): Update to 7.15.
2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice 2f805e97f2
gnu: aide: Update to 0.16.1.
* gnu/packages/admin.scm (aide): Update to 0.16.1.
2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice 737300be4b
gnu: aide: Move project home.
* gnu/packages/admin.scm (aide)[source, home-page]: Update.
2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice 8dbd8e426c
gnu: aspell-dict-it: Update to 2.4-20070901-0.
* gnu/packages/aspell.scm (aspell-dict-it): Update to 2.4-20070901-0.
2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice b4ed7c3e8d
gnu: libinput: Don't use NAME in source URI.
* gnu/packages/freedesktop.scm (libinput)[source]: Hard-code NAME.
2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice e3df159edc
gnu: geos: Update to 3.7.1.
* gnu/packages/geo.scm (geos): Update to 3.7.1.
2019-03-12 15:26:19 +01:00
Pierre Neidhardt 75dabac633
gnu: Add emacs-lisp-extra-font-lock.
* gnu/packages/emacs-xyz.scm (emacs-lisp-extra-font-lock): New variable.
2019-03-12 09:28:01 +01:00
Pierre Neidhardt b6180f93bd
gnu: emacs-suggest: Update to 0.7.
* gnu/packages/emacs-xyz.scm (emacs-suggest): Update to 0.7.
2019-03-12 09:24:31 +01:00
Pierre Neidhardt a922b2aee2
gnu: emacs-helm: Update to 3.1.
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.1.
2019-03-12 08:06:50 +01:00
Tobias Geerinckx-Rice 2ee05bb9d4
gnu: freedink-engine: Update to 109.6.
* gnu/packages/games.scm (freedink-engine): Update to 109.6.
2019-03-12 02:22:37 +01:00
Tobias Geerinckx-Rice 98704a8133
gnu: libmanette: Update to 0.2.2.
* gnu/packages/games.scm (libmanette): Update to 0.2.2.
2019-03-12 02:22:37 +01:00
Tobias Geerinckx-Rice a554462123
gnu: kicad-symbols: Use GIT-FILE-NAME.
* packages/engineering.scm (kicad-symbols)[source]: Use GIT-FILE-NAME.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice 65bab0120b
gnu: kicad-symbols: Update to 5.0.2.
* gnu/packages/engineering.scm (kicad-symbols): Update to 5.0.2.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice b13b7143d7
gnu: kicad: Don't use NAME in source URI.
* gnu/packages/engineering.scm (kicad)[source]: Hard-code NAME.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice 23df8f3578
gnu: kicad: Update to 5.0.2.
* gnu/packages/engineering.scm (kicad): Update to 5.0.2.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice 3d21f1ea0f
gnu: gtkwave: Update to 3.3.99.
* gnu/packages/fpga.scm (gtkwave): Update to 3.3.99.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 5cfe650b9d
gnu: python-sqlalchemy: Use HTTPS home page.
* gnu/packages/databases.scm (python-sqlalchemy)[home-page]: Use HTTPS.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 6d04f694dc
gnu: python-sqlalchemy: Update to 1.3.1.
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.3.1.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 96ec46047b
gnu: gcompris-qt: Update to 0.96.
* gnu/packages/education.scm (gcompris-qt): Update to 0.96.
[inputs]: Add openssl.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 909404b571
gnu: python-sql: Update to 1.0.0.
* gnu/packages/databases.scm (python-sql): Update to 1.0.0.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice 99e690a59a
gnu: python-pyodbc: Update to 4.0.25.
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.25.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice 72b7de49b4
gnu: python-psycopg2: Update to 2.7.7.
* gnu/packages/databases.scm (python-psycopg2): Update to 2.7.7.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice d49bdbca5c
gnu: perl-dbd-sqlite: Update to 1.62.
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.62.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice 49596a5413
gnu: perl-dbd-mysql: Update to 4.050.
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.050.
2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice 2f813be342
gnu: perl-sql-abstract: Update to 1.86.
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.86.
2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice 55f4282e0c
gnu: guile-colorized: Move project home.
* gnu/packages/guile-xyz.scm (guile-colorized)[source, home-page]: Update.
2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice 1340ce2899
gnu: guile-colorized: Don't use unstable tarball.
* gnu/packages/guile-xyz.scm (guile-colorized)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-12 02:22:33 +01:00
Brian Leung 1bc24bbf00
gnu: Add emacs-debpaste.
* gnu/packages/emacs-xyz.scm (emacs-debpaste): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-03-11 23:12:26 +01:00
Brian Leung 6f93b525d3
gnu: Add emacs-xml-rpc.
* gnu/packages/emacs-xyz.scm (emacs-xml-rpc): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-03-11 23:12:26 +01:00
Ludovic Courtès bfc9c33930
packages: Add the channel .go files to the search path.
Until now %LOAD-COMPILED-PATH would wrongfully contain:

  CHANNEL/share/guile/site/X.Y

for each channel, thereby ignoring all the .go files of channels.  This
fixes it so that %LOAD-COMPILED-PATH instead contains:

  CHANNEL/lib/guile/X.Y/site-ccache

* guix/describe.scm (current-channel-entries): New procedure.
(package-path-entries): Change to return the %LOAD-COMPILED-PATH entries
as a second value.
* gnu/packages.scm (%package-module-path): Expect two values from
'package-path-entries' and augment %LOAD-COMPILED-PATH accordingly.
2019-03-11 23:12:26 +01:00
Ludovic Courtès 082c648d28
services: mate-desktop: Deprecate the 'mate-desktop-service' procedure.
* gnu/services/desktop.scm (mate-desktop-service): Deprecate.
* doc/guix.texi (Desktop Services): Document 'mate-desktop-service-type'
and 'mate-desktop-configuration'.  Fix spelling of "Enlightenment".
2019-03-11 23:12:26 +01:00
Ludovic Courtès 984a61624c
services: mate-desktop: Add default value.
* gnu/services/desktop.scm (mate-desktop-service-type)[default-value]:
New field.
2019-03-11 23:12:26 +01:00
Rutger Helling 7959ccac3f
gnu: swaylock: Fix indentation.
* gnu/packages/wm.scm (swaylock): Fix indentation.
2019-03-11 20:31:30 +01:00
Rutger Helling b0805973cd
gnu: Add swaylock.
* gnu/packages/wm.scm (swaylock): New variable.
2019-03-11 20:28:41 +01:00
Rutger Helling 06ae5efcf3
gnu: Add swayidle.
* gnu/packages/wm.scm (swayidle): New variable.
2019-03-11 20:28:41 +01:00
Rutger Helling 2ff844f090
gnu: Add sway.
* gnu/packages/wm.scm (sway): New variable.
2019-03-11 20:28:41 +01:00
Rutger Helling eea969cf8d
gnu: Add wlroots.
* gnu/packages/wm.scm (wlroots): New variable.
2019-03-11 20:28:41 +01:00
Pierre Neidhardt 684626763f
gnu: emacs-magit: Fix perl path in dedicated variable.
* gnu/packages/emacs-xyz.scm (emacs-magit)[arguments]: Do it.
2019-03-11 19:01:49 +01:00
Pierre Neidhardt 842e66c573
gnu: Add emacs-lorem-ipsum.
* gnu/packages/emacs-xyz.scm (emacs-lorem-ipsum): New variable.
2019-03-11 18:46:25 +01:00
Oleg Pykhalov 34e3d028b9
gnu: emacs-json-reformat: Fix test.
This patch deletes a test which tries to compare JSON objects order.

* gnu/packages/emacs-xyz.scm (emacs-json-reformat): Delete
'json-reformat-test:json-reformat-region' test.
2019-03-11 19:52:39 +03:00
Ricardo Wurmus 4948c23677
gnu: r-with-tests: Update to 3.5.3.
* gnu/packages/statistics.scm (r-with-tests): Update to 3.5.3.
2019-03-11 15:25:27 +01:00
Tobias Geerinckx-Rice e445bd1607
gnu: s6-linux-utils: Update to 2.5.0.1.
* gnu/packages/skarnet.scm (s6-linux-utils): Update to 2.5.0.1.
2019-03-11 13:25:15 +01:00
Tobias Geerinckx-Rice 8dc458bb18
gnu: s6-linux-init: Update to 0.4.0.1.
* gnu/packages/skarnet.scm (s6-linux-init): Update to 0.4.0.1.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice b673d2d793
gnu: s6-portable-utils: Update to 2.2.1.3.
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.1.3.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice 0953b09aa8
gnu: s6-rc: Update to 0.5.0.0.
* gnu/packages/skarnet.scm (s6-rc): Update to 0.5.0.0.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice 8722fd43d4
gnu: s6-networking: Update to 2.3.0.4.
* gnu/packages/skarnet.scm (s6-networking): Update to 2.3.0.4.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice ce3262e9a3
gnu: s6-dns: Update to 2.3.0.2.
* gnu/packages/skarnet.scm (s6-dns): Update to 2.3.0.2.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice 6954594d5c
gnu: s6: Update to 2.8.0.0.
* gnu/packages/skarnet.scm (s6): Update to 2.8.0.0.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice 5c9bf737c4
gnu: execline: Update to 2.5.1.0.
* gnu/packages/skarnet.scm (execline): Update to 2.5.1.0.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice a699a81b84
gnu: skalibs: Update to 2.8.0.1.
* gnu/packages/skarnet.scm (skalibs): Update to 2.8.0.1.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice 5e5bd81843
gnu: picocom: Fix description.
* gnu/packages/terminals.scm (picocom)[synopsis]: Shorten.
[description]: Properly introduce.
2019-03-11 13:25:12 +01:00
Tobias Geerinckx-Rice 33238b5520
gnu: picocom: Update to 3.1.
* gnu/packages/terminals.scm (picocom): Update to 3.1.
2019-03-11 13:25:12 +01:00
Tobias Geerinckx-Rice 130c12c9b9
gnu: perl-image-exiftool: Update to 11.31.
* gnu/packages/photo.scm (perl-image-exiftool): Update to 11.31.
2019-03-11 13:25:12 +01:00
Tobias Geerinckx-Rice 0234f4af27
gnu: perl-image-exiftool: Add upstream URL.
* gnu/packages/photo.scm (perl-image-exiftool)[source]: Also download
from the home page.
2019-03-11 13:25:11 +01:00
Mark H Weaver 3edd7a3f4c
gnu: linux-libre: Update to 5.0.1.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.1.
(%linux-libre-hash): Update hash.
2019-03-11 07:14:58 -04:00
Mark H Weaver 32ede5bbf9
gnu: linux-libre@4.19: Update to 4.19.28.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.28.
(%linux-libre-4.19-hash): Update hash.
2019-03-11 07:14:01 -04:00
Efraim Flashner 2206f23679
gnu: Add eternalterminal.
* gnu/packages/terminals.scm (eternalterminal): New variable.
2019-03-11 10:30:58 +02:00
Efraim Flashner a5c8460a6d
gnu: crawl: Build without SSE only on some architecures.
This is a follow-up to b89284407f.

* gnu/packages/games.scm (crawl)[arguments]: Remove custom 'patch-flags
phase, add make-flag on non-x86* architectures to build without SSE.
2019-03-11 10:06:29 +02:00
Tobias Geerinckx-Rice 93a72fa7c9
gnu: xvid: Update to 1.3.5.
* gnu/packages/video.scm (xvid): Update to 1.3.5.
2019-03-11 02:08:04 +01:00
Tobias Geerinckx-Rice d05c14dfc9
gnu: python-acme, certbot: Update to 0.32.0.
* gnu/packages/tls.scm (python-acme): Update to 0.32.0.
(certbot)[source]: Update hash.
[native-inputs]: Replace python-nose with python-pytest.
[propagated-inputs]: Add python-cryptography.
2019-03-11 02:08:04 +01:00
Tobias Geerinckx-Rice 4d34fe4681
gnu: avidemux: Update to 2.7.2.
* gnu/packages/video.scm (avidemux): Update to 2.7.2.
[arguments]: Update version of included ffmpeg.
2019-03-11 02:08:04 +01:00
Tobias Geerinckx-Rice 642de36b9e
gnu: avidemux: Factorise ffmpeg version.
* gnu/packages/video.scm (avidemux)[arguments]: Move oft-repeated
hard-coded ffmpeg version number to a single let-bound variable.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice 7d3ac6c08e
gnu: avidemux: Don't use NAME in source URI.
* gnu/packages/video.scm (avidemux)[source]: Hard-code NAME.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice 129294e748
gnu: youtube-dl: Update to 2019.03.09.
* gnu/packages/video.scm (youtube-dl): Update to 2019.03.09.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice 585be42f46
gnu: texmaker: Update to 5.0.3.
* gnu/packages/tex.scm (texmaker): Update to 5.0.3.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice dbfb24824b
gnu: stunnel: Update to 5.50.
* gnu/packages/web.scm (stunnel): Update to 5.50.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice a9644c5a49
gnu: you-get: Update to 0.4.1270.
* gnu/packages/video.scm (you-get): Update to 0.4.1270.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice 266cd19eb9
gnu: nginx-documentation: Update to 2019-03-01-2345-7ef11708457e.
* gnu/packages/web.scm (nginx-documentation): Update to 2019-03-01-2345-7ef11708457e.
[arguments]: Simplify substitution.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice fd46742dd2
gnu: nginx: Update to 1.15.9.
* gnu/packages/web.scm (nginx): Update to 1.15.9.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice 0330d6b2bf
gnu: xf86-video-ati: Update to 19.0.0.
* gnu/packages/xorg.scm (xf86-video-ati): Update to 19.0.0.
[source]: Re-indent.
2019-03-11 02:08:01 +01:00
Tobias Geerinckx-Rice 77ad8ec4fc
gnu: xf86-video-amdgpu: Update to 19.0.0.
* gnu/packages/xorg.scm (xf86-video-amdgpu): Update to 19.0.0.
[source]: Re-indent.
2019-03-11 02:08:01 +01:00
Tobias Geerinckx-Rice c170080689
gnu: console-setup: Update to 1.190.
* gnu/packages/xorg.scm (console-setup): Update to 1.190.
2019-03-11 02:08:01 +01:00
Tobias Geerinckx-Rice 0189045904
gnu: snd: Update to 19.2.
* gnu/packages/audio.scm (snd): Update to 19.2.
2019-03-11 02:08:00 +01:00
Ludovic Courtès 8b3ad455be
services: guix: Pre-compute the default ACL.
This makes the first boot slightly faster.

* gnu/services/base.scm (not-config?): New procedure.
(hydra-key-authorization): Rewrite to pre-compute the default ACL, and
pre-compute it using (guix pki) directly.
2019-03-10 23:41:33 +01:00
Ludovic Courtès 309d87c3aa
services: guix: Allocate build user UIDs in the system range.
Until now we were allocating the UIDs of build users above 30000, which
is in "normal" user UID range.  This static allocation was unnecessary,
so this change lets the system allocate UIDs in the system range (below
1000).

* gnu/services/base.scm (guix-build-accounts): Remove #:first-uid, and
remove 'uid' field from 'user-account'.
2019-03-10 23:41:33 +01:00
Ludovic Courtès 45fef894eb
gnu: gnome-shell: Avoid top-level reference to inkscape.
Fixes <https://bugs.gnu.org/34806>.
Reported by Marius Bakke <mbakke@fastmail.com>.

* gnu/packages/gnome.scm (gnome-shell)[source](snippet): Remove
reference to INKSCAPE.  Instead, simply copy the SVG file to
data/theme.
[arguments]: Add 'convert-logo-to-png' phase.
[native-inputs]: Add INKSCAPE.
2019-03-10 23:41:33 +01:00
Tobias Geerinckx-Rice 5ae5932b2f
gnu: ansible: Update to 2.7.8 [fixes CVE-2019-3828].
* gnu/packages/admin.scm (ansible): Update to 2.7.8.
2019-03-10 23:00:08 +01:00
Marius Bakke 7fda7b8fad
gnu: pugixml: Build as shared library.
* gnu/packages/patches/pugixml-versioned-libdir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (pugixml)[source](patches): New field.
[arguments]: Instruct the build system to create a shared rather than static
library.
[native-inputs]: Add PKG-CONFIG.
2019-03-10 21:44:25 +01:00
Marius Bakke e2bdf60982
gnu: FileZilla: Update to 3.41.1.
* gnu/packages/ftp.scm (filezilla): Update to 3.41.1.
2019-03-10 21:44:25 +01:00
Marius Bakke 6324727770
gnu: pugixml is a regular input.
* gnu/packages/emulators.scm (mame)[native-inputs]: Move PUGIXML ...
[inputs]: ... here.
* gnu/packages/ftp.scm (filezilla)[native-inputs, inputs]: Likewise.
2019-03-10 21:44:25 +01:00
Oleg Pykhalov e44de1d2fb
services: zabbix-front-end: Show location in messages.
* gnu/services/monitoring.scm (zabbix-front-end-config): Show location in
messages.
2019-03-10 21:32:38 +03:00
Oleg Pykhalov d132d9f96b
services: configuration: Add '%location'.
* gnu/services/configuration.scm (define-configuration): Add '%location'.
2019-03-10 21:32:38 +03:00
Marius Bakke 41ce92501b
gnu: xfd: Update to 1.1.3.
* gnu/packages/xorg.scm (xfd): Update to 1.1.3.
2019-03-10 18:30:51 +01:00
Marius Bakke 06e3ed5d19
gnu: xprop: Update to 1.2.4.
* gnu/packages/xorg.scm (xprop): Update to 1.2.4.
2019-03-10 18:30:51 +01:00
Marius Bakke df8dbfb30b
gnu: notmuch: Update to 0.28.3.
* gnu/packages/mail.scm (notmuch): Update to 0.28.3.
2019-03-10 18:30:51 +01:00
Marius Bakke 2c0cf9eec7
gnu: xapian: Update to 1.4.11.
* gnu/packages/search.scm (xapian, python-xapian-bindings): Update to 1.4.11.
2019-03-10 18:30:51 +01:00
Marius Bakke 511930c294
gnu: libmspack: Update to 0.10.1.
* gnu/packages/compression.scm (libmspack): Update to 0.10.1.
2019-03-10 18:30:50 +01:00
Marius Bakke 755226e9c2
gnu: python-dask: Update to 1.1.4.
* gnu/packages/python-xyz.scm (python-dask): Update to 1.1.4.
2019-03-10 18:30:50 +01:00
Marius Bakke f1fff66be5
gnu: elogind: Update to 239.4.
* gnu/packages/freedesktop.scm (elogind): Update to 239.4.
2019-03-10 18:30:50 +01:00
Tobias Geerinckx-Rice 6845ab5204
gnu: Import (gnu packages image) in (gnu packages scanner).
This is a follow-up to commit 10bd2889d2.

* gnu/packages/scanner.scm: #:use-module (gnu packages image).
2019-03-10 17:12:16 +01:00
Tobias Geerinckx-Rice 10bd2889d2
gnu: sane-backends: Support PNG scanimage output.
* gnu/packages/scanner.scm (sane-backends)[inputs]: Add libpng.
2019-03-10 16:33:55 +01:00
Ricardo Wurmus ca32afacf9
gnu: Add btanks.
* gnu/packages/games.scm (btanks): New variable.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus d7764d42e4
gnu: Add libsmpeg-with-sdl1.
* gnu/packages/video.scm (libsmpeg-with-sdl1): New variable.
(libsmpeg)[version]: Change to 0.4.5-401.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus 8ada024ba6
gnu: Add 4dtris.
* gnu/packages/games.scm (4dtris): New variable.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus c06709b8a4
gnu: Add slingshot.
* gnu/packages/games.scm (slingshot): New variable.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus 05487ed8e6
gnu: scons: Update to 3.0.4.
* gnu/packages/python-xyz.scm (scons): Update to 3.0.4.
[arguments]: Remove second instance of "imp.load_module" (bug 34236).
2019-03-10 14:04:28 +01:00
Tobias Geerinckx-Rice 4eb57ca883
gnu: Add opensmtpd-next.
* gnu/packages/mail.scm (opensmtpd-next): New public variable.
2019-03-10 13:37:18 +01:00
Tobias Geerinckx-Rice 380384e419
gnu: ibus: Update Unicode data to 12.0.0.
* gnu/packages/ibus.scm (ibus)[native-inputs]: Use versioned URLs for
Unicode data and update hashes.
2019-03-10 13:37:18 +01:00
Pierre Neidhardt 2b613a1a5d
gnu: hyperledger-fabric: Fix description, set supported system and parallel build.
* gnu/packages/hyperledger.scm (hyperledger-fabric)[description]: Rephrase
into something less marketing-ish.
[arguments]: Build with multiple jobs.
[supported-systems]: Support x86_64-linux only.
2019-03-09 12:30:24 +01:00
Ricardo Wurmus 7d4cab7473
gnu: Add openfst.
* gnu/packages/machine-learning.scm (openfst): New variable.
2019-03-09 10:43:37 +01:00
Pierre Neidhardt 983550692d
gnu: Add hyperledger-fabric.
* gnu/local.mk (hyperledger): New variable.
2019-03-09 10:15:46 +01:00
Tobias Geerinckx-Rice 373abfb398
gnu: lynis: Update to 2.7.2.
* gnu/packages/admin.scm (lynis): Update to 2.7.2.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice 7b957a3344
gnu: youtube-viewer: Update to "3.5.4.
* gnu/packages/video.scm (youtube-viewer): Update to "3.5.4.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice 37fc44eab9
gnu: dovecot: Avoid unnecessary patching.
* gnu/packages/mail.scm (dovecot)[arguments]: Replace ‘pre-configure’
patching with custom ‘make install sysconfdir=…’.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice f762e49f28
gnu: dovecot: Indent arguments.
* gnu/packages/mail.scm (dovecot)[arguments]: C-M-q and tuck left.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice 7969751f54
gnu: i3lock-color: Update to 2.12.c.
* gnu/packages/wm.scm (i3lock-color): Update to 2.12.c.
[inputs]: Add xcb-util-xrm.
2019-03-09 02:33:30 +01:00
Tobias Geerinckx-Rice f45cc966ba
gnu: i3lock-color: Don't use unstable tarball.
* gnu/packages/wm.scm (i3lock-color)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-09 02:33:30 +01:00
Tobias Geerinckx-Rice a48db08afe
gnu: i3lock-fancy: Don't use unstable tarball.
* gnu/packages/wm.scm (i3lock-fancy)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-09 02:33:30 +01:00
Ludovic Courtès d429878daf
activation: Shared system home directories are now 555 and root-owned.
Fixes <https://bugs.gnu.org/34788>.
Reported by Jack Hill <jackhill@jackhill.us>.

Regression introduced by the combination of
8bb76f3d44 and
0ae735bcc8ff7fdc89d67b492bdee9091ee19e86: /var/empty would be 700 and
owned by one of the system accounts (thus inaccessible to others), and
/var/run/dbus would be 700 as well, thereby preventing D-Bus clients
from connecting to the daemon.

* gnu/build/activation.scm (duplicates): New procedure.
(activate-users+groups)[system-accounts]: New variable.
Use it.  Make shared system account home directories #o555 and
root-owned.
* gnu/services/dbus.scm (dbus-activation): Make /var/run/dbus #o755.
* gnu/tests/base.scm (run-basic-test): Test the ownership and
permissions of /var/empty.
2019-03-08 23:21:59 +01:00
Ricardo Wurmus 74c2339fff
gnu: Add java-eclipse-jdt-compiler-apt.
* gnu/packages/java.scm (java-eclipse-jdt-compiler-apt): New variable.
2019-03-08 23:18:56 +01:00
Ricardo Wurmus 8b6acb1f20
gnu: blast+: Update to 2.7.1.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.7.1.
[inputs]: Add lmdb.
[source]: Remove obsolete patch.
* gnu/package/patches/blast+-fix-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-08 23:00:07 +01:00
Ricardo Wurmus f87dcb4d75
gnu: Add texlive-latex-pdfx.
* gnu/packages/tex.scm (texlive-latex-pdfx): New variable.
2019-03-08 21:49:25 +01:00
Ricardo Wurmus cafd4d387b
gnu: Add texlive-latex-xmpincl.
* gnu/packages/tex.scm (texlive-latex-xmpincl): New variable.
2019-03-08 21:48:19 +01:00
Ricardo Wurmus 847768b9cc
gnu: Add translate2geda.
* gnu/packages/engineering.scm (translate2geda): New variable.
2019-03-08 21:45:29 +01:00
Ricardo Wurmus a734da8675
gnu: Add rkrlv2.
* gnu/packages/music.scm (rkrlv2): New variable.
2019-03-08 21:02:49 +01:00
Danny Milosavljevic eb6ef893e8
gnu: fc-host-tools: Update to 10.
* gnu/packages/embedded.scm (fc-host-tools): Update to 10.
[arguments]<:make-flags>: Change INSTBIN to INSTALL_PREFIX.
2019-03-08 19:33:04 +01:00
Efraim Flashner 606c198788
gnu: crawl: Find all the included headers.
* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
change the path for some headers.
2019-03-08 17:22:29 +02:00
Efraim Flashner b89284407f
gnu: crawl: Don't assume system architecture.
This allows crawl to build on non-Intel architectures.

* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
remove x86* specific CFLAGS.
2019-03-08 17:22:29 +02:00
Efraim Flashner fc7d6bc60d
gnu: crawl: Build with python3-wrapper.
* gnu/packages/games.scm (crawl)[native-inputs replace python with
python-wrapper.
[arguments]: Remove custom 'patch-python phase.
2019-03-08 17:22:26 +02:00
Vagrant Cascadian fb0aeaacea
gnu: u-boot: Remove openssl input.
Fixes <https://bugs.gnu.org/34717>.

* gnu/packages/bootloaders (u-boot): Remove openssl from native-inputs.
  (u-boot-tools): Disable FIT_SIGNATURES in tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-08 12:31:37 +01:00
Rutger Helling 75f0bda71a
gnu: flatpak: Add more dependencies.
* gnu/packages/package-management.scm (flatpak)[propagated-inputs]: Add
"glib-networking", "gnupg" and "gsettings-desktop-schemas".
2019-03-08 11:50:56 +01:00
Ricardo Wurmus daeb3cd98c
gnu: r-genelendatabase: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.18.0.
2019-03-08 09:30:00 +01:00
Ricardo Wurmus 183b6575e7
gnu: r-mzr: Update to 2.16.2.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.2.
[inputs]: Replace "boost" with "boost-for-mysql".
2019-03-08 09:14:01 +01:00
Ricardo Wurmus 6453d7aecc
gnu: r-gviz: Update to 1.26.5.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.5.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus 101dcc29d3
gnu: r-ensembldb: Update to 2.6.7.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.7.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus d3713237c5
gnu: r-annotationhub: Update to 2.14.4.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.4.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus 53e7f028ed
gnu: r-rhtslib: Update to 1.14.1.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.14.1.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus d86b9eca56
gnu: r-genomicfeatures: Update to 1.34.4.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.4.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus d493043daf
gnu: r-rtracklayer: Update to 1.42.2.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.2.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus 57f40dc220
gnu: r-rsamtools: Update to 1.34.1.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.34.1.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus 58209b1e21
gnu: r-biocparallel: Update to 1.16.6.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.6.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus cd43ae3fd6
gnu: r-variantannotation: Update to 1.28.11.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.11.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus fff11bccc6
gnu: r-genomeinfodb: Update to 1.18.2.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.2.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus 8972989e10
gnu: r-dexseq: Update to 1.28.2.
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.2.
2019-03-08 09:14:00 +01:00
Tobias Geerinckx-Rice 792d3ed7eb
gnu: man-pages: Update to 5.00.
* gnu/packages/man.scm (man-pages): Update to 5.00.
[source]: Re-format.
2019-03-08 01:35:42 +01:00
Tobias Geerinckx-Rice 13b1fb5c92
gnu: dovecot: Update to 2.3.5.
* gnu/packages/mail.scm (dovecot): Update to 2.3.5.
[arguments]: Patch more tests in ‘patch-file-names’ phase, renamed from
‘patch-other-file-names’.
2019-03-08 01:34:41 +01:00
Tobias Geerinckx-Rice 2fa1a3a808
gnu: dovecot: Don't use NAME in source URI.
* gnu/packages/mail.scm (dovecot)[source]: Hard-code NAME.
2019-03-08 01:34:40 +01:00
Ricardo Wurmus 933dad9156
gnu: Add mruby.
* gnu/packages/ruby.scm (mruby): New variable.
2019-03-08 00:07:45 +01:00
Ricardo Wurmus 20662a3020
gnu: r-ggmap: Update to 3.0.0.
* gnu/packages/cran.scm (r-ggmap): Update to 3.0.0.
[propagated-inputs]: Add r-bitops, r-dplyr, r-glue, r-httr, r-magrittr,
r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-geosphere, r-mapproj,
r-proto, and r-reshape2.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus 8f37f53837
gnu: r-readxl: Update to 1.3.0.
* gnu/packages/cran.scm (r-readxl): Update to 1.3.0.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus f544ab3379
gnu: r-sys: Update to 3.0.
* gnu/packages/cran.scm (r-sys): Update to 3.0.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus 790db519f4
gnu: r-servr: Update to 0.13.
* gnu/packages/cran.scm (r-servr): Update to 0.13.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus e89d54278d
gnu: r-flextable: Update to 0.5.1.
* gnu/packages/cran.scm (r-flextable): Update to 0.5.1.
[propagated-inputs]: Add r-data-table, r-magick, and r-rlang; remove r-r6 and
r-stringr.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus e190d9af6c
gnu: r-proxy: Update to 0.4-23.
* gnu/packages/cran.scm (r-proxy): Update to 0.4-23.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus bef78244de
gnu: r-haven: Update to 2.1.0.
* gnu/packages/cran.scm (r-haven): Update to 2.1.0.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus 59c513422c
gnu: r-emdbook: Update to 1.3.11.
* gnu/packages/cran.scm (r-emdbook): Update to 1.3.11.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus 937e15571c
gnu: r-rmysql: Update to 0.10.17.
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.17.
[native-inputs]: Remove pkg-config.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus 2170a36c3b
gnu: r-gower: Update to 0.2.0.
* gnu/packages/cran.scm (r-gower): Update to 0.2.0.
[native-inputs]: Remove r-knitr.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus 6e4a9b8365
gnu: r-ggsignif: Update to 0.5.0.
* gnu/packages/cran.scm (r-ggsignif): Update to 0.5.0.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus 532b359865
gnu: r-jomo: Update to 2.6-7.
* gnu/packages/cran.scm (r-jomo): Update to 2.6-7.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus d2cd541cc7
gnu: r-mice: Update to 3.4.0.
* gnu/packages/cran.scm (r-mice): Update to 3.4.0.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus 22777c8657
gnu: r-xfun: Update to 0.5.
* gnu/packages/cran.scm (r-xfun): Update to 0.5.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus 87bb1b8c9e
gnu: r-metap: Update to 1.1.
* gnu/packages/cran.scm (r-metap): Update to 1.1.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus d8787b3387
gnu: r-ifultools: Update to 2.0-5.
* gnu/packages/cran.scm (r-ifultools): Update to 2.0-5.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus cb40b6eb9b
gnu: r-radiant-data: Update to 0.9.9.
* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.9.
[propagated-inputs]: Add r-stringi; remove r-summarytools.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus 00fb320392
gnu: r-later: Update to 0.8.0.
* gnu/packages/cran.scm (r-later): Update to 0.8.0.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus 8b2c80b8a3
gnu: r-vim: Update to 4.8.0.
* gnu/packages/cran.scm (r-vim): Update to 4.8.0.
[propagated-inputs]: Add r-ranger.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus b9b1041324
gnu: r-fnn: Update to 1.1.3.
* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus ea010aa31e
gnu: r-arules: Update to 1.6-3.
* gnu/packages/cran.scm (r-arules): Update to 1.6-3.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus f5ce1dcce2
gnu: r-zip: Update to 2.0.0.
* gnu/packages/cran.scm (r-zip): Update to 2.0.0.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus bbe9421174
gnu: r-maptools: Update to 0.9-5.
* gnu/packages/cran.scm (r-maptools): Update to 0.9-5.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus d3f22f0aea
gnu: r-reticulate: Update to 1.11.1.
* gnu/packages/cran.scm (r-reticulate): Update to 1.11.1.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus fd1a17a522
gnu: r-officer: Update to 0.3.3.
* gnu/packages/cran.scm (r-officer): Update to 0.3.3.
[propagated-inputs]: Add r-rlang.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus 7754557090
gnu: r-prediction: Update to 0.3.6.2.
* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.2.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus 3d5bcae0c2
gnu: r-abjutils: Update to 0.2.3.
* gnu/packages/cran.scm (r-abjutils): Update to 0.2.3.
[propagated-inputs]: Add r-furrr, r-future, r-readr, and r-rlang; remove
r-plyr.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus 1007b1b6d2
gnu: r-slam: Update to 0.1-45.
* gnu/packages/cran.scm (r-slam): Update to 0.1-45.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus a431c38166
gnu: r-hash: Update to 2.2.6.1.
* gnu/packages/cran.scm (r-hash): Update to 2.2.6.1.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus a6a87db8ce
gnu: r-dvmisc: Update to 1.1.3.
* gnu/packages/cran.scm (r-dvmisc): Update to 1.1.3.
[propagated-inputs]: Add r-cubature, r-data-table, r-dplyr, r-ggplot2,
r-mvtnorm, r-pracma, r-purrr, and r-survey.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus 5093cbdc04
gnu: r-summarytools: Update to 0.9.2.
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.2.
[propagated-inputs]: Add r-checkmate, r-dplyr, r-magick, and r-tidyr.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus b1f39e8c38
gnu: r-multcomp: Update to 1.4-10.
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-10.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus e0f861649c
gnu: r-emmeans: Update to 1.3.3.
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.3.
[propagated-inputs]: Add r-numderiv.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus e2fee46f04
gnu: r-afex: Update to 0.23-0.
* gnu/packages/cran.scm (r-afex): Update to 0.23-0.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus f18ca07eef
gnu: r-lmertest: Update to 3.1-0.
* gnu/packages/cran.scm (r-lmertest): Update to 3.1-0.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus 91f0b745f6
gnu: r-ks: Update to 1.11.4.
* gnu/packages/cran.scm (r-ks): Update to 1.11.4.
[propagated-inputs]: Remove r-misc3d.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus 0b14b100a2
gnu: r-tidytree: Update to 0.2.4.
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.4.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus 4bc5d45144
gnu: r-bigrquery: Update to 1.1.0.
* gnu/packages/cran.scm (r-bigrquery): Update to 1.1.0.
[propagated-inputs]: Add r-bit64.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus 8a05d17037
gnu: r-gmp: Update to 0.5-13.4.
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.4.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus 7706a98cda
gnu: r-huge: Update to 1.3.0.
* gnu/packages/cran.scm (r-huge): Update to 1.3.0.
[propagated-inputs]: Add r-rcpp and r-rcppeigen; remove r-lattice.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus f59cdeaf25
gnu: r-igraph: Update to 1.2.4.
* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus ed494a0acd
gnu: r-dplyr: Update to 0.8.0.1.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.0.1.
[native-inputs]: Move r-rcpp and r-bh from here...
[propagated-inputs]: ...to here; remove r-bindrcpp.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus 6caf80fbaf
gnu: r-lme4: Update to 1.1-21.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-21.
[native-inputs]: Move r-rcpp and r-rcppeigen from here...
[propagated-inputs]: ...to here; add r-boot.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus 34a98f79d7
gnu: r-forcats: Update to 0.4.0.
* gnu/packages/statistics.scm (r-forcats): Update to 0.4.0.
[propagated-inputs]: Add r-ellipsis.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus 6a0a2342dd
gnu: r-r6: Update to 2.4.0.
* gnu/packages/statistics.scm (r-r6): Update to 2.4.0.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus 4b16c00e9a
gnu: r-formatr: Update to 1.6.
* gnu/packages/statistics.scm (r-formatr): Update to 1.6.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus 1f7a76a0c1
gnu: r-evaluate: Update to 0.13.
* gnu/packages/statistics.scm (r-evaluate): Update to 0.13.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus 48a4b775b9
gnu: r-mgcv: Update to 1.8-27.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-27.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus 71fe7f9d21
gnu: r-stringi: Update to 1.3.1.
* gnu/packages/statistics.scm (r-stringi): Update to 1.3.1.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus 605fcf8a23
gnu: r-stringr: Update to 1.4.0.
* gnu/packages/statistics.scm (r-stringr): Update to 1.4.0.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus 17abcd521a
gnu: r-ranger: Update to 0.11.2.
* gnu/packages/statistics.scm (r-ranger): Update to 0.11.2.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus 9066534d4c
gnu: r-openssl: Update to 1.2.2.
* gnu/packages/statistics.scm (r-openssl): Update to 1.2.2.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus a1d9387d82
gnu: r-catools: Update to 1.17.1.2.
* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.2.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus 4fadef3ba0
gnu: r-xml: Update to 3.98-1.19.
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.19.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus bc7895e1cf
gnu: r-flexmix: Update to 2.3-15.
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-15.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus 6be62a5a72
gnu: r-irlba: Update to 2.3.3.
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.3.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus b22a20405a
gnu: r-registry: Update to 0.5-1.
* gnu/packages/statistics.scm (r-registry): Update to 0.5-1.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus 3db71d065c
gnu: r-r-utils: Update to 2.8.0.
* gnu/packages/statistics.scm (r-r-utils): Update to 2.8.0.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus 21886e730b
gnu: r-r-rsp: Update to 0.43.1.
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.43.1.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus ed4100dc96
gnu: r-mvtnorm: Update to 1.0-10.
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-10.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus ebd37b49f9
gnu: r-tidyr: Update to 0.8.3.
* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.3.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus 84840deb95
gnu: r-purrr: Update to 0.3.1.
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.1.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus b58220f599
gnu: r-pbapply: Update to 1.4-0.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus e51096b2ea
gnu: r-vgam: Update to 1.1-1.
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-1.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus aeb11b7549
gnu: r-ggthemes: Update to 4.1.0.
* gnu/packages/statistics.scm (r-ggthemes): Update to 4.1.0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus d235cf7268
gnu: r-shiny: Update to 1.2.0.
* gnu/packages/cran.scm (r-shiny): Update to 1.2.0.
[arguments]: Adjust processing of minified JavaScript.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus 83ef38b038
gnu: r-epi: Update to 2.35.
* gnu/packages/cran.scm (r-epi): Update to 2.35.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus 75cbc80037
gnu: r-network: Update to 1.14-377.
* gnu/packages/cran.scm (r-network): Update to 1.14-377.
[propagated-inputs]: Add r-magrittr and r-tibble.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus fadc49c6e5
gnu: r-vegan: Update to 2.5-4.
* gnu/packages/cran.scm (r-vegan): Update to 2.5-4.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus d1c2fd8eeb
gnu: r-future-apply: Update to 1.2.0.
* gnu/packages/cran.scm (r-future-apply): Update to 1.2.0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus 6e8b38d3e8
gnu: Add r-furrr.
* gnu/packages/cran.scm (r-furrr): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus f0bff69873
gnu: Add r-survey.
* gnu/packages/cran.scm (r-survey): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus dab3e92c94
gnu: Add r-magick.
* gnu/packages/cran.scm (r-magick): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus 3f22a115bd
gnu: Add r-ellipsis.
* gnu/packages/cran.scm (r-ellipsis): New variable.
2019-03-07 23:52:35 +01:00
Pierre Neidhardt d748cb5f47
gnu: Add autorandr.
* gnu/packages/xdisorg.scm (autorandr): New variable.
2019-03-07 22:23:38 +01:00
Julien Lepiller 945723be97
gnu: php: Update to 7.3.3.
* gnu/packages/php.scm (php): Update to 7.3.3.
2019-03-07 21:18:30 +01:00
Efraim Flashner dcf4d01f30
gnu: libmicrohttpd: Enable parallel tests.
* gnu/packages/gnunet.scm (libmicrohttpd)[arguments]: Don't disable
parallel tests.
2019-03-07 22:00:53 +02:00
Efraim Flashner c4bfce994e
gnu: libmicrohttpd: Update to 0.9.63.
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.63.
[arguments]: Remove custom phase to add missing LDFLAGS.
2019-03-07 22:00:53 +02:00
Efraim Flashner 0ef54303f3
gnu: c-graph: Update to 2.0.1.
* gnu/packages/maths.scm (c-graph): Update to 2.0.1.
2019-03-07 22:00:52 +02:00
Ludovic Courtès 0ae735bcc8
activation: Build account databases with (gnu build accounts).
* gnu/build/activation.scm (enumerate, current-users, current-groups)
(add-group, add-user, modify-user, ensure-user): Remove.
(activate-users+groups)[touch, activate-user]: Remove.
[make-home-directory]: New procedure.
Rewrite in terms of 'user+group-databases', 'write-group', etc.
* gnu/build/install.scm (directives): Remove "/root".
* gnu/system/shadow.scm (account-activation): Remove (setenv "PATH" ...)
expression, which is now unneeded.
2019-03-07 20:05:09 +01:00
Ludovic Courtès ec600e4544
Add (gnu build accounts).
* gnu/build/accounts.scm, tests/accounts.scm: New files.
* Makefile.am (SCM_TESTS): Add tests/accounts.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add build/accounts.scm.
2019-03-07 20:05:09 +01:00
Ludovic Courtès 6061d01512
activation: Operate on <user-account> and <user-group> records.
* gnu/system/accounts.scm (sexp->user-group, sexp->user-account): New
procedures.
* gnu/system/shadow.scm (account-activation): Call them in the arguments
to 'activate-users+groups'.
(account-shepherd-service): Likewise.
* gnu/build/activation.scm (activate-users+groups): Expect a list of
<user-account> and a list of <user-group>.  Replace uses of 'match' on
tuples with calls to record accessors.
(activate-user-home): Likewise.
2019-03-07 20:05:09 +01:00
Ludovic Courtès f6f67b87c0
system: Add (gnu system accounts).
The (gnu system accounts) module is meant to be used both on the build-
and on the host-side.

* gnu/system/shadow.scm <top level>: Call 'default-shell'.
(<user-account>, <user-group>): Move to...
* gnu/system/accounts.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add system/accounts.scm.
2019-03-07 20:04:02 +01:00
Pierre Neidhardt b60e9fb82f
gnu: fuseiso: Fix typo in description.
* gnu/packages/linux.scm (fuseiso)[description]: Fix typo.
2019-03-07 17:12:46 +01:00
Tobias Geerinckx-Rice 1e1142d8cb
gnu: Add nullmailer.
* gnu/packages/mail.scm (nullmailer): New public variable.
2019-03-07 15:39:46 +01:00
Ricardo Wurmus 3189fad217
gnu: neovim: Let build phase return #T.
* gnu/packages/vim.scm (neovim)[arguments]: Return #T from "patch-tic" phase.
2019-03-07 13:39:45 +01:00
Ricardo Wurmus 3b296475bf
gnu: cd-hit: Support longer sequences.
* gnu/packages/bioinformatics.scm (cd-hit)[arguments]: Pass MAX_SEQ to make
flags.
2019-03-07 13:38:01 +01:00
Ricardo Wurmus 237ee6f2b2
gnu: python2-fastlmm: Disable tests.
* gnu/packages/machine-learning.scm (python2-fastlmm)[arguments]: Disable
tests.
2019-03-07 13:37:58 +01:00
Rutger Helling 9fd6ad3e35
gnu: wireguard: Update to 0.0.20190227.
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190227.
[arguments]: Disable tests.
2019-03-07 12:23:43 +01:00
Rutger Helling 9cb4bda222
gnu: nftables: Update to 0.9.0.
* gnu/packages/linux.scm (nftables): Update to 0.9.0.
[arguments]: Add "--disable-man-doc" configure flag.
2019-03-07 12:08:21 +01:00
Kei Kebreau ccf2446730
gnu: minetest: Update to 5.0.0.
* gnu/packages/games.scm (minetest-data, minetest): Update to 5.0.0.
2019-03-07 05:31:19 -05:00
Gábor Boskovits 0a10abf73e
gnu: neovim: Fix #34616.
This fixes a segmentation fault in neovim, where an error return value
is passed in as a pointer.

* gnu/packages/vim.scm (neovim)[arguments](phases): Add 'patch-tic phase.
2019-03-07 11:08:31 +01:00
Gábor Boskovits 2702aa9136
gnu: unibilium: Update to 2.0.0.
* gnu/packages/terminal.scm (unibilium): Update to 2.0.0.
[native-inputs]: Add perl.
2019-03-07 09:48:03 +01:00
Tobias Geerinckx-Rice abe6e670d3
gnu: sane-backends-minimal: Fix USB support.
* gnu/packages/scanner.scm (sane-backends-minimal)[inputs]: Replace
libusb-compat with libusb.
[arguments]: Disable tests that require USB access.
2019-03-07 02:13:26 +01:00
Mark H Weaver 274fa49100
gnu: linux-libre: Update to 5.0.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.
(%linux-libre-hash): Update hash.
(%linux-libre-4.20-patches): Rename to ...
(%linux-libre-5.0-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-omap2plus):
Use %linux-libre-5.0-patches instead of %linux-libre-4.20-patches.
* gnu/packages/aux-files/linux-libre/4.20-arm.conf,
gnu/packages/aux-files/linux-libre/4.20-arm64.conf,
gnu/packages/aux-files/linux-libre/4.20-i686.conf,
gnu/packages/aux-files/linux-libre/4.20-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2019-03-06 17:51:55 -05:00
Mark H Weaver 9870f3ec61
gnu: linux-libre@4.19: Update to 4.19.27.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.27.
(%linux-libre-4.19-hash): Update hash.
2019-03-06 17:51:12 -05:00
Mark H Weaver 1b1a6c028b
gnu: linux-libre@4.14: Update to 4.14.105.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.105.
(%linux-libre-4.14-hash): Update hash.
2019-03-06 17:50:21 -05:00
Mark H Weaver 7850fa891d
gnu: linux-libre@4.9: Update to 4.9.162.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.162.
2019-03-06 17:49:26 -05:00
Ricardo Wurmus fc240e7e05
gnu: synthv1: Update to 0.9.5.
* gnu/packages/music.scm (synthv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus 6ef147bd1d
gnu: drumkv1: Update to 0.9.5.
* gnu/packages/music.scm (drumkv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus cf6195906c
gnu: samplv1: Update to 0.9.5.
* gnu/packages/music.scm (samplv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus 4b159add6f
gnu: padthv1: Update to 0.9.5.
* gnu/packages/music.scm (padthv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus d935f69b11
gnu: yoshimi: Update to 1.5.10.2.
* gnu/packages/music.scm (yoshimi): Update to 1.5.10.2.
2019-03-06 22:26:06 +01:00
Vagrant Cascadian 01d8a2a3d9
gnu: electron-cash: Update to 3.3.6.
* gnu/packages/finance (electron-cash): Update to 3.3.6.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-06 16:06:26 -05:00
Vagrant Cascadian 307603dd88
gnu: electrum: Update to 3.3.4.
* gnu/packages/finance (electrum): Update to 3.3.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-06 16:06:26 -05:00
Vagrant Cascadian 11599cff1e
gnu: diffoscope: Update to 113.
* gnu/packages/package-management (diffoscope): Update to 113.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-06 22:05:07 +01:00
Ricardo Wurmus 61e265d294
gnu: Add multitime.
* gnu/packages/benchmark.scm (multitime): New variable.
2019-03-06 21:55:14 +01:00
Ricardo Wurmus 8035819f4c
gnu: r-org-mm-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): ...to here.
2019-03-06 21:43:33 +01:00
Ricardo Wurmus d56df35a25
gnu: r-org-hs-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): ...to here.
2019-03-06 21:42:39 +01:00
Ricardo Wurmus f8780e96ff
gnu: r-org-dm-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): ...to here.
2019-03-06 21:41:48 +01:00
Ricardo Wurmus 3a08940e1a
gnu: r-org-ce-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): ...to here.
2019-03-06 21:35:20 +01:00
Ricardo Wurmus 7bc5d1b0e1
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Move from here...
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
...to here.
2019-03-06 21:33:17 +01:00
Ricardo Wurmus 13dabd6947
gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
...to here.
2019-03-06 21:31:41 +01:00
Ricardo Wurmus 0c792ffbd1
gnu: r-bsgenome-celegans-ucsc-ce10: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10): ...to here.
2019-03-06 21:30:30 +01:00
Ricardo Wurmus b7d93cf508
gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
2019-03-06 21:29:20 +01:00
Ricardo Wurmus c3adc83054
gnu: r-bsgenome-mmusculus-ucsc-mm10: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): ...to here.
2019-03-06 21:26:54 +01:00
Ricardo Wurmus 5acb9052cf
gnu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.
2019-03-06 21:25:18 +01:00
Ricardo Wurmus fe0b76e215
gnu: r-bsgenome-hsapiens-ucsc-hg19: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): ...to here.
2019-03-06 21:23:42 +01:00
Ricardo Wurmus 40a6505711
gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
...to here.
2019-03-06 21:23:20 +01:00
Ricardo Wurmus 66e35ce63b
gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): Move
from here...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): ...to
here.
2019-03-06 21:16:33 +01:00
Ricardo Wurmus bfb93b4889
gnu: r-geneplotter: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-geneplotter): Move from here...
* gnu/packages/bioconductor.scm (r-geneplotter): ...to here.
2019-03-06 21:13:38 +01:00
Ricardo Wurmus 9f8698ad1c
gnu: Add guile-stis-parser.
* gnu/packages/guile-xyz.scm (guile-stis-parser): New variable.
2019-03-06 21:07:49 +01:00
Ricardo Wurmus 3d13b448e5
gnu: r-copynumber: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.
2019-03-06 21:07:49 +01:00
Ricardo Wurmus 6aa896d82e
gnu: Update copyright headers.
This is a follow-up to commit 1fe9a36173.

* gnu/packages/bioconductor.scm: Update copyright header to account for moved
package.
2019-03-06 21:07:49 +01:00
Efraim Flashner d2b38df62e
gnu: font-gnu-unifont: Update to 12.0.01.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 12.0.01.
2019-03-06 20:51:47 +02:00
Tobias Geerinckx-Rice 393b55d5c7
gnu: cabextract: Don't use NAME in source URI.
* gnu/packages/compression.scm (cabextract)[source]: Hard-code NAME.
2019-03-06 16:48:40 +01:00
Tobias Geerinckx-Rice bde093c23d
gnu: cabextract: Update to 1.9.1.
* gnu/packages/compression.scm (cabextract): Update to 1.9.1.
2019-03-06 16:48:39 +01:00
Tobias Geerinckx-Rice 8fadbc4bb3
gnu: lcov: Update to 1.14.
* gnu/packages/code.scm (lcov): Update to 1.14.
2019-03-06 16:48:39 +01:00
Marius Bakke 7016e62070
gnu: python-mako: Update home page.
* gnu/packages/python-xyz.scm (python-mako)[home-page]: Use HTTPS.
2019-03-06 16:30:48 +01:00
Marius Bakke dff79364cf
gnu: fuseiso: Fix typo.
* gnu/packages/linux.scm (fuseiso)[synopsis]: s/imsages/images.
2019-03-06 16:30:48 +01:00
Marius Bakke a9eeda20b4
gnu: valgrind: Add download mirror.
* gnu/packages/valgrind.scm (valgrind)[source](uri): Add mirror.
2019-03-06 16:30:48 +01:00
Ricardo Wurmus 38502a7d13
gnu: bismark: Update to 0.20.1.
* gnu/packages/bioinformatics.scm (bismark): Update to 0.20.1.
[source]: Remove obsolete snippet.
[arguments]: Add build phase "replace-plotly.js" and add requried modules;
adjust "install" phase.
[inputs]: Add perl-carp and perl-getopt-long.
[native-inputs]: Add plotly.js and uglify-js.
2019-03-06 16:26:23 +01:00
Pierre Neidhardt 1564e0fefa
gnu: Add fuseiso.
* gnu/packages/linux.scm (fuseiso): New variable.
2019-03-06 16:24:34 +01:00
Ricardo Wurmus cb66fb101f
gnu: Add r-scde.
* gnu/packages/bioinformatics.scm (r-scde): New variable.
2019-03-06 15:55:54 +01:00
Ricardo Wurmus afeb10a056
gnu: Add bowtie1.
* gnu/packages/bioinformatics.scm (bowtie1): New variable.
2019-03-06 15:32:45 +01:00
Kei Kebreau 5b8f892872
gnu: octave, octave-cli: Update to 5.1.0.
* gnu/packages/maths.scm (octave, octave-cli): Update to 5.1.0.
2019-03-06 09:17:33 -05:00
Kei Kebreau e366521a94
gnu: crawl, crawl-tiles: Update to 0.23.1.
* gnu/packages/games.scm (crawl, crawl-tiles): Update to 0.23.1.
[native-inputs]: Add python and python-pyyaml.
[arguments]: Add 'patch-python' phase, modify the 'check' phase and move the
'check' phase back after the 'build' phase.
2019-03-06 09:17:24 -05:00
Ricardo Wurmus 5bb674a0cd
gnu: perl-czplib: Fix installation directory.
* gnu/packages/perl.scm (perl-czplib)[arguments]: Fix installation directory.
2019-03-06 15:05:38 +01:00
Ricardo Wurmus 5531782d1c
gnu: Add guile-studio.
* gnu/packages/guile-xyz.scm (guile-studio): New variable.
2019-03-06 14:40:02 +01:00
Ricardo Wurmus 4fc9b5b1dd
gnu: Add genrich.
* gnu/packages/bioinformatics.scm (genrich): New variable.
2019-03-06 13:28:45 +01:00
Ricardo Wurmus 1fe9a36173
gnu: r-dnacopy: Remove duplicate definition.
Reported by Christopher Baines <mail@cbaines.net>.

* gnu/packages/bioinformatics.scm (r-dnacopy): Remove variable.
2019-03-06 10:39:28 +01:00
Ricardo Wurmus 3dad6087be
gnu: Add r-org-dr-eg-db.
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
2019-03-06 10:29:25 +01:00
Ricardo Wurmus 43d6776ba4
gnu: java-eclipse-jdt-core: Update to 3.16.0.
* gnu/packages/java.scm (java-eclipse-jdt-core): Update to 3.16.0.
2019-03-06 10:10:23 +01:00
Ricardo Wurmus c8427a5e91
gnu: java-eclipse-core-resources: Update to 3.13.200.
* gnu/packages/java.scm (java-eclipse-core-resources): Update to 3.13.200.
2019-03-06 10:10:23 +01:00
Ricardo Wurmus 4fa9b6e657
gnu: java-eclipse-core-runtime: Update to 3.15.100.
* gnu/packages/java.scm (java-eclipse-core-runtime): Update to 3.15.100.
2019-03-06 10:10:23 +01:00
Ricardo Wurmus e40e3792e6
gnu: java-eclipse-equinox-common: Update to 3.10.200.
* gnu/packages/java.scm (java-eclipse-equinox-common): Update to 3.10.200.
2019-03-06 10:10:19 +01:00
Rutger Helling d9eada7917
gnu: shaderc: Update to 2018.0.
* gnu/packages/vulkan.scm (shaderc): Update to 2018.0.
2019-03-06 09:26:50 +01:00
Rutger Helling 264c803b82
gnu: spirv-tools: Update to 2019.1.
* gnu/packages/vulkan.scm (spirv-tools): Update to 2019.1.
[arguments]: Add 'fixgcc7 phase.
[native-inputs]: Add gcc-7.
2019-03-06 09:26:50 +01:00
Rutger Helling 9a1de5f0fa
gnu: spirv-headers: Update to commit 8bea0a2.
* gnu/packages/vulkan.scm (spirv-headers): Update to commit 8bea0a2.
2019-03-06 09:26:49 +01:00
Rutger Helling 3113ecfaec
gnu: glslang: Update to 7.11.3113.
* gnu/packages/vulkan.scm (glslang): Update to 7.11.3113.
2019-03-06 09:26:49 +01:00
Leo Famulari 3546e97f38
gnu: MPD: Update to 0.21.5.
* gnu/packages/mpd.scm (mpd): Update to 0.21.5.
2019-03-05 21:10:54 -05:00
Arne Babenhauserheide 84eb265eb8
gnu: FFmpeg: Build with AV1 support.
* gnu/packages/video.scm (ffmpeg)[inputs]: Add libaom.
[arguments]: Pass '--enable-libaom' to #:configure-flags.
(ffmpeg-3.4)[inputs, arguments]: Filter out libaom.
2019-03-05 18:29:20 -05:00
Arne Babenhauserheide a7afa45401
gnu: Add libaom.
* gnu/packages/video.scm (libaom): New variable.

Co-authored-by: Leo Famulari <leo@famulari.name>
2019-03-05 18:29:20 -05:00
Tobias Geerinckx-Rice dbfa3bb5d0
gnu: you-get: Update to 0.4.1256.
* gnu/packages/video.scm (you-get): Update to 0.4.1256.
2019-03-06 00:15:28 +01:00
Tobias Geerinckx-Rice fe67e51301
gnu: youtube-dl: Update to 2019.03.01.
* gnu/packages/video.scm (youtube-dl): Update to 2019.03.01.
2019-03-06 00:15:27 +01:00
Tobias Geerinckx-Rice 84bdd0ec06
gnu: plantuml: Update to 1.2019.2.
* gnu/packages/uml.scm (plantuml): Update to 1.2019.2.
2019-03-06 00:15:27 +01:00
Tobias Geerinckx-Rice 2830802043
gnu: xinit: Update to 1.4.1.
* gnu/packages/xorg.scm (xinit): Update to 1.4.1.
2019-03-06 00:15:27 +01:00
Tobias Geerinckx-Rice 2e625ef73a
gnu: lxc: Fix documentation directory.
* gnu/packages/virtualization.scm (lxc)[arguments]: Set ‘--docdir’ in #:configure-flags.
2019-03-06 00:15:26 +01:00
Tobias Geerinckx-Rice cc7058b20b
gnu: lxc: Update to 3.1.0.
* gnu/packages/virtualization.scm (lxc): Update to 3.1.0.
2019-03-06 00:15:26 +01:00
Leo Famulari 5f7c036cf6
gnu: dav1d: Update to 0.2.0.
* gnu/packages/video.scm (dav1d): Update to 0.2.0.
[source]: Add alternate URL.
2019-03-05 17:56:49 -05:00
Ludovic Courtès 5387971a9e
artwork: Update snapshot to b975164.
* gnu/artwork.scm (%artwork-repository): Update to b975164.
2019-03-05 23:08:53 +01:00
Ludovic Courtès af85757915
gnu: singularity: Leave PATH unchanged.
Previously 'singularity help' & co. would all fail on Guix System
because Coreutils, grep, etc. were not found in $PATH.

* gnu/packages/linux.scm (singularity)[source](snippet): Remove "PATH"
setting from 'bin/singularity.in'.
2019-03-05 23:08:53 +01:00
Ludovic Courtès fbf26cbcf3
gnu: singularity: Patch 'Makefile.in' in a snippet.
* gnu/packages/linux.scm (singularity)[source](snippet, modules): New
fields.
[arguments]: Remove 'disable-install-hook' phase.
2019-03-05 23:08:53 +01:00
Ludovic Courtès 107b081ef7
gnu: wpa-supplicant: Add 'cpe-name' property.
* gnu/packages/admin.scm (wpa-supplicant-minimal)[properties]: New
field.
2019-03-05 23:08:53 +01:00
Leo Famulari f4319c6e28
gnu: Syncthing: Update to 1.1.0.
* gnu/packages/syncthing.scm (syncthing): Update to 1.1.0.
2019-03-05 14:42:49 -05:00
Efraim Flashner f862697b5c
gnu: emacs-no-x-toolkit: Fix configure flags.
* gnu/packages/emacs.scm (emacs-no-x-toolkit)[arguments]: Don't lose
custom configure flags.
2019-03-05 21:38:51 +02:00
Pierre Neidhardt 7e80767dc3
gnu: emacs-disk-usage: Update to 1.3.0.
* gnu/packages/emacs-xyz.scm (emacs-disk-usage): Update to 1.3.0.
2019-03-05 20:03:20 +01:00
Tobias Geerinckx-Rice 908a3f3614
gnu: thinkfan: Let the build system handle rcscripts/.
This moves them from /share/thinkfan to their conventional locations
in /etc and /lib; the former was an arbitrary Guixism anyway.

* gnu/packages/linux.scm (thinkfan)[arguments]:
Re-write 'install-rc-scripts' as 'create-init-scripts' and move it after
the 'unpack' phase.
2019-03-05 17:01:53 +01:00
Tobias Geerinckx-Rice 9a3d176ee1
gnu: thinkfan: Update to 1.0.2.
* gnu/packages/linux.scm (thinkfan): Update to 1.0.2.
[arguments]: Adjust source directory.
2019-03-05 17:01:53 +01:00
Tobias Geerinckx-Rice 9eb7cde0e8
gnu: iucode-tool: Update to 2.3.1.
* gnu/packages/linux.scm (iucode-tool): Update to 2.3.1.
2019-03-05 17:01:53 +01:00
Tobias Geerinckx-Rice 59ac0a2a59
gnu: f2fs-tools: Update to 1.12.0.
* gnu/packages/linux.scm (f2fs-tools): Update to 1.12.0.
2019-03-05 17:01:53 +01:00
Tobias Geerinckx-Rice 2d588f3c03
gnu: f2fs-tools: Don't use NAME in source URI.
* gnu/packages/linux.scm (f2fs-tools-1.7, f2fs-tools)[source]:
Hard-code NAME.
2019-03-05 17:01:52 +01:00
Tobias Geerinckx-Rice 9e6008b775
gnu: xfsprogs: Update to 4.20.0.
* gnu/packages/linux.scm (xfsprogs): Update to 4.20.0.
2019-03-05 17:01:52 +01:00
Tobias Geerinckx-Rice e569c7723d
gnu: libnftnl: Update to 1.1.2.
* gnu/packages/linux.scm (libnftnl): Update to 1.1.2.
2019-03-05 17:01:52 +01:00
Tobias Geerinckx-Rice 083639a553
gnu: genext2fs: Update to 1.4.1-4.
* gnu/packages/linux.scm (genext2fs): Update to 1.4.1-4.
[arguments]: Add 'apply-debian-patches' phase.
[native-inputs]: Add autoconf and automake.
2019-03-05 17:01:51 +01:00
Efraim Flashner f5e08f1793
gnu: wget2: Update to 1.99.1.
This fixes https://issues.guix.info/issue/34718.

* gnu/packages/wget.scm (wget2): Update to 1.99.1.
[arguments]: Add phase to skip network tests. Update custom 'bootstrap
phase to not require unnecessary binaries.
[inputs]: Remove doxygen, python. Move autoconf, automake, flex,
gettext-minimal, libtool ...
[native-inputs]: ... to here. Add python-2.
2019-03-05 17:46:46 +02:00
Danny Milosavljevic f347fb79df
linux-modules: module-soft-dependencies: Partition the result and return it as two lists.
* gnu/build/linux-modules.scm (module-soft-dependencies): Partition the
result and return it as two lists.
2019-03-05 13:43:34 +01:00
Ivan Petkov 1a3db0b22f
gnu: rust: Update to 1.31.1.
* gnu/patches/rust-1.30-gdb-llvm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.29): ...this.
(rust-1.30): New variable.
(rust): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-05 13:43:09 +01:00
Rutger Helling ac5aad535c
gnu: scdoc: Update to 1.9.4.
* gnu/packages/man.scm (scdoc): Update to 1.9.4.
2019-03-05 11:49:06 +01:00
Pierre Neidhardt df747c8d68
gnu: Add mailcatcher.
* gnu/packages/ruby.scm (mailcatcher): New variable.
2019-03-05 11:25:21 +01:00
Pierre Neidhardt be6016db4b
gnu: Add ruby-skinny.
* gnu/packages/ruby.scm (ruby-skinny): New variable.
2019-03-05 11:22:34 +01:00
Pierre Neidhardt 6e87695ba4
gnu: Add ruby-thin.
* gnu/packages/ruby.scm (ruby-thin): New variable.
2019-03-05 11:22:34 +01:00
Pierre Neidhardt 3bb094e282
gnu: Add ruby-sinatra.
* gnu/packages/ruby.scm (ruby-sinatra): New variable.
2019-03-05 11:22:34 +01:00
Pierre Neidhardt acb9e3d8cc
gnu: Add ruby-mustermann.
* gnu/packages/ruby.scm (ruby-mustermann): New variable.
2019-03-05 11:22:28 +01:00
Pierre Neidhardt 3355e49cf8
gnu: ruby-rack-protection: Update to 2.0.5.
* gnu/packages/ruby.scm (ruby-rack-protection): Update to 2.0.5.
2019-03-05 10:06:05 +01:00
Brett Gilio 9c7226dfd5
gnu: python-language-server: Update to 0.24.0.
* gnu/packages/python-xyz.scm (python-language-server): Update to 0.24.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-04 22:37:02 -05:00
Tobias Geerinckx-Rice d22d246a25
gnu: btrfs-progs: Update to 4.20.2.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.20.2.
2019-03-05 00:05:14 +01:00
Tobias Geerinckx-Rice d23495fa69
gnu: folks: Update to 0.11.4.
* gnu/packages/gnome.scm (folks): Update to 0.11.4.
2019-03-05 00:05:14 +01:00
Tobias Geerinckx-Rice e5f4796e62
gnu: folks: Don't use NAME in source URI.
* gnu/packages/gnome.scm (folks)[source]: Hard-code NAME.
2019-03-05 00:05:13 +01:00
Tobias Geerinckx-Rice 8d6813f98e
gnu: virtualgl: Update to 2.6.1.
* gnu/packages/gl.scm (virtualgl): Update to 2.6.1.
2019-03-05 00:05:13 +01:00
Tobias Geerinckx-Rice 77593a444f
gnu: gegl: Update to 0.4.14.
* gnu/packages/gimp.scm (gegl): Update to 0.4.14.
2019-03-05 00:05:13 +01:00
Tobias Geerinckx-Rice bba5bb30dd
gnu: font-anonymous-pro: Use HTTPS home page.
* gnu/packages/fonts.scm (font-anonymous-pro)[source, home-page]: Use HTTPS.
2019-03-05 00:05:13 +01:00
Tobias Geerinckx-Rice 76498783ea
gnu: font-fira-code: Update to 1.206.
* gnu/packages/fonts.scm (font-fira-code): Update to 1.206.
2019-03-05 00:05:12 +01:00
Tobias Geerinckx-Rice 73c5c4820a
gnu: font-terminus: Update to 4.47.
* gnu/packages/fonts.scm (font-terminus): Update to 4.47.  Re-indent.
[native-inputs]: Replace perl with python.  Order alphabetically.
[arguments]: Remove #:configure-flags.
2019-03-05 00:05:12 +01:00
Tobias Geerinckx-Rice 2d8e1e286d
gnu: font-wqy-zenhei: Remove redundant FILE-NAME.
* gnu/packages/fonts.scm (font-wqy-zenhei)[source]: Remove FILE-NAME field.
2019-03-05 00:05:12 +01:00
Tobias Geerinckx-Rice 78cda0bca5
gnu: font-wqy-zenhei: Use HTTPS home page.
* gnu/packages/fonts.scm (font-wqy-zenhei)[home-page]: Use HTTPS.
2019-03-05 00:05:11 +01:00
Leo Famulari f0736d4795
gnu: go-github.com-jtolds-gls: Update to 4.20.
* gnu/packages/golang.scm (go-github.com-jtolds-gls): Update to 4.20.
2019-03-04 17:04:42 -05:00
Ricardo Wurmus e31f3cd57c
gnu: Add perl-data-dumper.
* gnu/packages/perl.scm (perl-data-dumper): New variable.
2019-03-04 23:02:12 +01:00
Ricardo Wurmus 84b226c27e
gnu: java-eclipse-jdt-core: Include resources.
* gnu/packages/java.scm (java-eclipse-jdt-core)[arguments]: Add build phases
"copy-resources" and "move-sources".
2019-03-04 23:02:12 +01:00
Marius Bakke 5ae458befc
gnu: rocksdb: Update to 5.18.3.
* gnu/packages/databases.scm (rocksdb): Update to 5.18.3.
2019-03-04 22:20:08 +01:00
Marius Bakke 6a7ef08aa9
gnu: liblo: Update to 0.30.
* gnu/packages/audio.scm (liblo): Update to 0.30.
2019-03-04 22:20:08 +01:00
Marius Bakke 248f651e77
gnu: xorg-server: Update to 1.20.4.
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.4.
(xorg-server-for-tests): Stay on version 1.20.3.
2019-03-04 22:20:07 +01:00
Marius Bakke cb505b27eb
gnu: xorg-server: Don't use NAME in source URI.
* gnu/packages/xorg.scm (xorg-server)[source](uri): Hard-code NAME.
2019-03-04 22:20:07 +01:00
Julien Lepiller b95d758b33
gnu: pootle: Update to 2.8.2.
* gnu/packages/django.scm (pootle): Update to 2.8.2.
2019-03-04 21:52:45 +01:00
Julien Lepiller add6635281
gnu: python-django-allauth: Update to 0.39.1.
* gnu/packages/django.scm (python-django-allauth): Update to 0.39.1.
2019-03-04 21:52:43 +01:00
Julien Lepiller 9597c55005
gnu: python2-openid: Fix package.
* gnu/packages/python-web (python2-openid)[arguments]: Disable tests.
2019-03-04 21:52:41 +01:00
Julien Lepiller 1396837184
gnu: python-django-rq: Update to 1.3.0.
* gnu/packages/django.scm (python-django-rq): Update to 1.3.0.
2019-03-04 21:52:38 +01:00
Julien Lepiller f55fe42b36
gnu: python-django-redis: Update to 4.10.0.
* gnu/packages/django.scm (python-django-redis): Update to 4.10.0.
2019-03-04 21:52:36 +01:00
Julien Lepiller 865c76ea3b
gnu: python-rq: Update to 0.13.0.
* gnu/packages/databases.scm (python-rq): Update to 0.13.0.
2019-03-04 21:52:33 +01:00
Julien Lepiller dcbe674c86
gnu: python-redis: Update to 3.2.0.
* gnu/packages/databases.scm (python-redis): Update to 3.2.0.
2019-03-04 21:52:17 +01:00
Christopher Baines bcbb3cc907
gnu: Add ruby-tilt.
* gnu/packages/ruby.scm (ruby-tilt): New variable.
2019-03-04 20:33:22 +00:00
Christopher Baines 8ea991e3af
gnu: Add ruby-haml.
* gnu/packages/ruby.scm (ruby-haml): New variable.
2019-03-04 20:33:22 +00:00
Christopher Baines 09e2b0af40
gnu: Add ruby-temple.
* gnu/packages/ruby.scm (ruby-temple): New variable.
2019-03-04 20:33:22 +00:00
Christopher Baines 76b732fbc3
gnu: Add ruby-markaby.
* gnu/packages/ruby.scm (ruby-markaby): New variable.
2019-03-04 20:33:21 +00:00
Christopher Baines 9efc888d97
gnu: Add ruby-sassc.
* gnu/packages/ruby.scm (ruby-sassc): New variable.
2019-03-04 20:33:21 +00:00
Christopher Baines 8c15015779
gnu: sassc: Update and improve the package.
Now that libsass is packaged, change the sassc package to build a dynamically
linked binary. Also update the version, and change the source to the Git
repository, rather than the archives from GitHub.

* gnu/packages/web.scm (sassc): Update to 3.5.0.
[source]: Change to the Git repository.
[arguments]: Tweak to link against libsass.
2019-03-04 20:33:21 +00:00
Christopher Baines 7fe1be1879
gnu: Add libsass.
* gnu/packages/web.scm (libsass): New variable.
2019-03-04 20:33:21 +00:00
Christopher Baines 450a3f7f2b
gnu: Add ruby-minitest-around.
* gnu/packages/ruby.scm (ruby-minitest-around): New variable.
2019-03-04 20:33:21 +00:00
Christopher Baines 93dc8684cf
gnu: Add ruby-test-construct.
* gnu/packages/ruby.scm (ruby-test-construct): New variable.
2019-03-04 20:33:21 +00:00
Christopher Baines d6084cdb12
gnu: Add ruby-omniauth-oauth2.
* gnu/packages/ruby.scm (ruby-omniauth-oauth2): New variable.
2019-03-04 20:33:21 +00:00
Christopher Baines ad6471d415
gnu: Add ruby-with-advisory-lock.
* gnu/packages/rails.scm (ruby-with-advisory-lock): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines e42eecdb78
gnu: Add ruby-warden-oauth2.
* gnu/packages/ruby.scm (ruby-warden-oauth2): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines e32c99d23e
gnu: Add ruby-warden.
* gnu/packages/ruby.scm (ruby-warden): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines 29dc48231d
gnu: Add ruby-omniauth.
* gnu/packags/ruby.scm (ruby-omniauth): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines 92b3750059
gnu: Add ruby-oauth2.
* gnu/packages/ruby.scm (ruby-oauth2): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines ca914b5bb1
gnu: Add ruby-multi-xml.
* gnu/packages/ruby.scm (ruby-multi-xml): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines 2a8581ac38
gnu: Add ruby-jwt.
* gnu/packages/ruby.scm (ruby-jwt): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines 2a9ce5cb3e
gnu: Add ruby-rbnacl.
* gnu/packages/ruby.scm (ruby-rbnacl): New variable.
2019-03-04 20:33:20 +00:00
Christopher Baines dbbe88d383
gnu: Add ruby-que.
* gnu/packages/ruby.scm (ruby-que): New variable.
2019-03-04 20:33:19 +00:00
Christopher Baines a714c30f96
gnu: Add ruby-terraform.
* gnu/packages/ruby.scm (ruby-terraform): New variable.
2019-03-04 20:33:19 +00:00
Christopher Baines b32225187b
gnu: Add ruby-lino.
* gnu/packages/ruby.scm (ruby-lino): New variable.
2019-03-04 20:33:19 +00:00
Christopher Baines 353b7eb8c5
gnu: Add ruby-hamster.
* gnu/packages/ruby.scm (ruby-hamster): New variable.
2019-03-04 20:33:19 +00:00
Christopher Baines 433e315430
gnu: Add ruby-open4.
Also add a copyright line, as I've obviously neglected to do that in the past.

* gnu/packages/ruby.scm (ruby-open4): New variable.
2019-03-04 20:33:17 +00:00
Efraim Flashner 2850d87772
gnu: dehydrated: Don't use unstable tarball.
* gnu/packages/tls.scm (dehydrated)[source]: Use release tarball.
[native-inputs]: Add gzip, tar.
[arguments]: Unzip tarball before installing. Install license file.
2019-03-04 22:17:26 +02:00
Dan Frumin 3d03fed47f
gnu: coq-coquelicot: Update to 3.0.2.
* gnu/packages/coq.scm (coq-coquelicot): Update to 3.0.2.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-03-04 20:58:57 +01:00
Pierre Neidhardt 7d3a78e731
gnu: emacs-orgit: Update to 20190304.
* gnu/packages/emacs-xyz.scm (emacs-orgit): Update to 20190304.
2019-03-04 19:42:10 +01:00
Tobias Geerinckx-Rice 171234d572
gnu: calcurse: Update to 4.4.0.
* gnu/packages/calcurse.scm (calcurse): Update to 4.4.0.
2019-03-04 19:07:10 +01:00
Tobias Geerinckx-Rice 02eae558fc
gnu: calcurse: Fix documentation directory.
* gnu/packages/calcurse.scm (calcurse)[arguments]: Set ‘--docdir’
in #:configure-flags' and add ‘respect-docdir’ phase to use it.
2019-03-04 19:07:10 +01:00
Tobias Geerinckx-Rice ad257ec8b5
gnu: thermald: Update to 1.8.
* gnu/packages/admin.scm (thermald): Update to 1.8.
[source]: Add patch.
* gnu/packages/patches/thermald-make-int-max32-visible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-03-04 19:07:10 +01:00
Ricardo Wurmus 96f39b2a6e
gnu: Add java-jblas.
* gnu/packages/java-maths.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-03-04 17:14:15 +01:00
Ricardo Wurmus 74fea1e2df
gnu: lyx: Remove obsolete patch.
* gnu/packages/patches/lyx-2.2.3-fix-test.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-04 17:14:15 +01:00
Efraim Flashner 0132f3e67f
gnu: emacs-minimal: Don't inherit configure-flags.
* gnu/packages/emacs.scm (emacs-minimal)[arguments]: Move
configure-flags lower than inherited package-arguments so it won't be
overwritten.
2019-03-04 17:35:26 +02:00
Rutger Helling c9d2d3104b
gnu: looking-glass-client: Update to commit 182c475.
* gnu/packages/virtualization.scm (looking-glass-client): Update to commit
182c475. Rename from lookingglass to looking-glass-client. Add
deprecated-package lookingglass.
2019-03-04 16:20:27 +01:00
Efraim Flashner 662ff659ec
gnu: mkvtoolnix: Use modular qt.
* gnu/packages/video.scm (mkvtoolnix)[inputs]: Remove qt, add qtbase,
qtmultimedia.
[native-inputs]: Add qttools.
2019-03-04 17:15:23 +02:00
Efraim Flashner f3395a7b4d
gnu: mkvtoolnix: Unbundle more libraries.
* gnu/packages/video.scm (mkvtoolnix)[source]: Remove more bundled
libraries.
[inputs]: Add fmt, cmark.
2019-03-04 17:15:23 +02:00
Efraim Flashner e7ed996c53
gnu: mkvtoolnix: Update to 31.0.0.
* gnu/packages/video.scm (mkvtoolnix): Update to 31.0.0.
[arguments]: Remove unneeded 'with-extra-includes' flag, add flags to
disable update checks and not use precompiled headers.
2019-03-04 17:15:20 +02:00
Lprndn c36448131d
gnu: Add arcan-sdl.
* gnu/packages/arcan.scm (arcan-sdl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-04 15:22:59 +01:00
Lprndn e32099732c
gnu: Add arcan.
* gnu/packages/arcan.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-04 15:22:59 +01:00
Pierre-Antoine Rouby 94be7c8b2a
gnu: emacs: Add modules support.
* gnu/packages/emacs.scm (emacs): Add modules support in configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-04 15:22:59 +01:00
Ludovic Courtès 56a93cb975
services: Use 'file-append' for user account shells.
* gnu/services/cuirass.scm (cuirass-account): Use 'file-append' instead
of #~(string-append #$shadow "/sbin/nologin").
* gnu/services/monitoring.scm (zabbix-server-account): Likewise.
(zabbix-agent-account): Likewise.
* gnu/services/rsync.scm (rsync-account): Likewise.
* gnu/services/ssh.scm (%openssh-accounts): Likewise.
2019-03-04 15:22:58 +01:00
Ludovic Courtès 8bb76f3d44
activation: Make home directories #o700 by default.
Until now they'd be #o755, except for /root, which is treated specially
in (gnu build install).

* gnu/build/activation.scm (activate-user-home): Chmod HOME to #o700.
Remove redundant 'unless system?'.
2019-03-04 15:22:58 +01:00
Ludovic Courtès ba926e3534
tests: Use non-deprecated (guix store) API.
This is a followup to f9e8a12379.

* gnu/tests/base.scm (run-basic-test)["/run/current-system is a GC
root"]: Use 'store-protocol-error?' instead of 'nix-protocol-error?'.
2019-03-04 15:22:58 +01:00
Ricardo Wurmus 3a0babacdc
gnu: Add r-htscluster.
* gnu/packages/bioconductor.scm (r-htscluster): New variable.
2019-03-04 15:00:18 +01:00
Ricardo Wurmus 4254b480c9
gnu: Add r-capushe.
* gnu/packages/cran.scm (r-capushe): New variable.
2019-03-04 15:00:05 +01:00
Ricardo Wurmus e7a53914f1
gnu: python-matplotlib-documentation: Fix build.
* gnu/packages/python-xyz.scm (python-matplotlib-documentation)
[native-inputs]: Add python-ipykernel; replace texlive with a texlive-union
consisting of texlive-latex-amsfonts, texlive-latex-amsmath,
texlive-latex-enumitem, texlive-latex-expdlist, texlive-latex-preview,
texlive-latex-type1cm, texlive-latex-ucs, texlive-generic-pdftex,
texlive-fonts-amsfonts, texlive-fonts-ec, texlive-fonts-adobe-times, and
texlive-fonts-txfonts.
[arguments]: Do not build PDF, remove PDF-related changes; patch to avoid
dependency on network resources.
2019-03-04 13:57:58 +01:00
Pierre Neidhardt b6fd7f5003
gnu: emacs-helm-emms: Update to 20190304.
* gnu/packages/emacs-xyz.scm (emacs-helm-emms): Update to 20190304.
2019-03-04 12:17:13 +01:00
Pierre Neidhardt 3499638ef8
gnu: emacs-evil-magit: Update to 20190224.
* gnu/packages/emacs-xyz.scm (emacs-evil-magit): Update to 20190224.
2019-03-04 08:33:35 +01:00
Pierre Neidhardt 3a56c51836
gnu: emacs-magit-todos: Update to 1.1.7.
* gnu/packages/emacs-xyz.scm (emacs-magit-todos): Update to 1.1.7.
2019-03-04 08:33:35 +01:00
Pierre Neidhardt d60213967a
gnu: emacs-magit: Update to 2.90.1.
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 2.90.1.
2019-03-04 08:33:35 +01:00
Efraim Flashner 3261a73280
gnu: avidemux: Build with modular qt.
* gnu/packages/video.scm (avidemux)[inputs]: Remove qt, add qtbase,
qttools.
2019-03-03 22:09:51 +02:00
Efraim Flashner ae63b2c582
gnu: avidemux: Update to 2.7.1.
* gnu/packages/video.scm (avidemux): Update to 2.7.1.
[arguments]: Update bundled ffmpeg to 3.3.7.
2019-03-03 22:09:47 +02:00
Efraim Flashner ad656e70b6
gnu: libopenshot: Build with modular qt.
* gnu/packages/video.scm (libopenshot)[propagated-inputs]: Remove qt,
add qtbase, qtmultimedia.
2019-03-03 17:35:50 +02:00
Efraim Flashner 277becbbb7
gnu: libopenshot: Remove bundled libraries.
* gnu/packages/video.scm (libopenshot)[source]: Add snippet to remove
bundled libraries.
2019-03-03 17:35:49 +02:00
Efraim Flashner 4f889375f2
gnu: libopenshot: Fix tests on other architectures.
* gnu/packages/video.scm (libopenshot)[source]: Add patch.
* gnu/packages/patches/libopenshot-fixup-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-03-03 17:35:49 +02:00
Brian Leung d2f555f59b
gnu: Add emacs-isearch+.
* gnu/packages/emacs-xyz.scm (emacs-isearch+): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-03 15:39:45 +01:00
Rutger Helling 0fa3d705d2
gnu: wine-staging: Add faudio support.
* gnu/packages/wine.scm (wine-staging)[inputs]: Add faudio.
[arguments]: Adjust patchinstall.sh to faudio.
* gnu/packages/wine.scm (wine64-staging)[arguments]: Adjust patchinstall.sh to
faudio.
2019-03-03 11:01:51 +01:00
Rutger Helling ea3510f8a7
gnu: Add faudio.
* gnu/packages/audio.scm (faudio): New variable.
2019-03-03 11:01:51 +01:00
Rutger Helling dbb1ef51c8
gnu: wine-staging: Update to 4.3.
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.3.
* gnu/packages/wine.scm (wine-staging): Update to 4.3.
2019-03-03 10:23:29 +01:00
Ricardo Wurmus d74656ea02
gnu: eolie: Update to 0.9.52.
* gnu/packages/gnome.scm (eolie): Update to 0.9.52.
2019-03-03 09:24:02 +01:00
Nicolas Goaziou 35556d7da0
gnu: musescore: Update to 3.0.4.
* gnu/packages/music.scm (musescore): Update to 3.0.4.
2019-03-03 00:17:30 +01:00
Marius Bakke 5a222ebaee
gnu: python-dask: Update to 1.1.3.
* gnu/packages/python-xyz.scm (python-dask): Update to 1.1.3.
2019-03-02 22:21:16 +01:00
Marius Bakke 0d6f2ea13a
gnu: appstream-glib: Update to 0.7.15.
* gnu/packages/glib.scm (appstream-glib): Update to 0.7.15.
2019-03-02 22:21:16 +01:00
Marius Bakke b4e1f1ae10
gnu: audit: Update to 2.8.5.
* gnu/packages/admin.scm (audit): Update to 2.8.5.
2019-03-02 22:21:16 +01:00
Marius Bakke b0251c71c7
gnu: libsecret: Update to 0.18.8.
* gnu/packages/gnome.scm (libsecret): Update to 0.18.8.
2019-03-02 22:21:16 +01:00
Marius Bakke 794e0664bd
gnu: ungoogled-chromium: Update to 72.0.3626.121-0.a80839c [fixes CVE-2019-5786].
* gnu/packages/chromium.scm (%chromium-version): Update to 72.0.3626.121.
(ungoogled-chromium-source): Update hash.
2019-03-02 22:21:16 +01:00
Marius Bakke e99e9e6f21
gnu: WebKitGTK: Update to 2.22.7.
* gnu/packages/webkit.scm (webkitgtk-2.22): Update to 2.22.7.
2019-03-02 22:21:16 +01:00
Marius Bakke 4422a8c60e
gnu: ldb: Update to 1.6.2.
* gnu/packages/samba.scm (ldb): Update to 1.6.2.
[native-inputs]: Change from PYTHON-2 to PYTHON.  Add WHICH.
2019-03-02 22:21:16 +01:00
Marius Bakke 97dcedbd2a
gnu: tdb: Update to 1.3.18.
* gnu/packages/databases.scm (tdb): Update to 1.3.18.
[native-inputs]: Add WHICH.  Change PYTHON-2 to PYTHON.
2019-03-02 22:21:15 +01:00
Marius Bakke 1ca20daa13
gnu: tevent: Update to 0.9.39.
* gnu/packages/samba.scm (tevent): Update to 0.9.39.
[native-inputs]: Add WHICH.  Change PYTHON-2 to PYTHON.
2019-03-02 22:21:15 +01:00
Marius Bakke 966c56f8c6
gnu: talloc: Update to 2.1.16.
* gnu/packages/samba.scm (talloc): Update to 2.1.16.
[native-inputs]: Add WHICH.
[inputs]: Change from PYTHON-2 to PYTHON.
(talloc/static)[arguments]: Adjust GCC command line.
2019-03-02 22:21:15 +01:00
Ricardo Wurmus c335df433f
gnu: pigx-chipseq: Update to 0.0.31.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.31.
2019-03-02 22:05:30 +01:00
Efraim Flashner e5a0348962
gnu: lyx: Parameterize more version variables.
* gnu/packages/tex.scm (lyx)[source]: Parameterize the version string.
[arguments]: Parameterize version variables in 'configre-flags and in
the custom phases 'setenv-check and 'install-symlink.
2019-03-02 22:15:37 +02:00
Ricardo Wurmus b17c892320
gnu: lyx: Update to 2.3.2-2.
* gnu/packages/tex.scm (lyx): Update to 2.3.2-2.
[source]: Remove patch.
[arguments]: Adjust configure flags; add build phase
"fix-compilation-with-boost-1.69"; remove phase "patch-installer"; create
missing file in phase "setenv-check".
[inputs]: Add mythes.
[propagated-inputs]: Replace texlive with a texlive-union containing
texlive-fonts-ec.
2019-03-02 18:44:56 +01:00
Pierre Neidhardt b8f924274b
gnu: emacs-desktop-environment: Update to 20190301.
* gnu/packages/emacs-xyz.scm (emacs-desktop-environment): Update to 20190301.
2019-03-02 16:15:12 +01:00
Leo Famulari 7a0479bb7b
gnu: Add WireGuard.
* gnu/packages/vpn.scm (wireguard): New variable.
2019-03-01 19:31:01 -05:00
Julien Lepiller 4fdd4d3312
gnu: bundler: Update to 1.17.3.
* gnu/packaqes/ruby.scm (bundler): Update to 1.17.3.
2019-03-01 23:52:30 +01:00
Tobias Geerinckx-Rice 23e3094b87
gnu: opensmtpd: Remove unused arguments.
* gnu/packages/mail.scm (opensmtpd)[arguments]: Remove unused procedure
arguments to 'patch-FHS-file-names' phase.
2019-03-01 23:41:42 +01:00
Tobias Geerinckx-Rice 38ab167fe7
gnu: perl-net-dns: Update to 1.19.
* gnu/packages/networking.scm (perl-net-dns): Update to 1.19.
2019-03-01 23:41:41 +01:00
Ricardo Wurmus 4f2ee8e285
gnu: teximpatient: Build with texlive-union.
* gnu/packages/tex.scm (teximpatient)[source]: Use url-fetch/tarbomb, so that
we can...
[arguments]: ...remove the custom "unpack" phase; disable tests instead of
deleting the "check" phase; add phase "fix-packaging-error".
[native-inputs]: Replace texlive with a texlive-union containing
texlive-latex-amsfonts, texlive-fonts-amsfonts, texlive-fonts-adobe-palatino,
texlive-fonts-adobe-zapfding, texlive-fonts-knuth-lib,
texlive-fonts-mflogo-font, and texlive-generic-pdftex.
2019-03-01 23:31:08 +01:00
Ricardo Wurmus 4628315bfb
gnu: Add texlive-fonts-adobe-zapfding.
* gnu/packages/tex.scm (texlive-fonts-adobe-zapfding): New variable.
2019-03-01 23:31:08 +01:00
Ricardo Wurmus f2d1f060c5
gnu: Add texlive-fonts-adobe-palatino.
* gnu/packages/tex.scm (texlive-fonts-adobe-palatino): New variable.
2019-03-01 23:31:08 +01:00
Ricardo Wurmus 01cf8c89de
gnu: Add texlive-fonts-mflogo-font.
* gnu/packages/tex.scm (texlive-fonts-mflogo-font): New variable.
2019-03-01 23:31:08 +01:00
Ricardo Wurmus 6072f82a1e
gnu: Add texlive-latex-mflogo.
* gnu/packages/tex.scm (texlive-latex-mflogo): New variable.
2019-03-01 23:31:08 +01:00
Ricardo Wurmus 96f5377d5e
gnu: texlive-fonts-knuth-lib: Build all tfm files.
* gnu/packages/tex.scm (texlive-fonts-knuth-lib)[arguments]: Build all tfm
files in "build" phase.
2019-03-01 23:31:08 +01:00
Ricardo Wurmus 5e9bf5a2e0
gnu: Add texlive-fonts-adobe-times.
* gnu/packages/tex.scm (texlive-fonts-adobe-times): New variable.
2019-03-01 23:31:08 +01:00
Ricardo Wurmus 00a7af0eea
gnu: texlive-latex-geometry: Add missing input.
* gnu/packages/tex.scm (texlive-latex-geometry)[propagated-inputs]: Add
texlive-latex-oberdiek.
2019-03-01 23:31:07 +01:00
Björn Höfling 1c492480ff
gnu: java-eclipse-jetty-http-test-classes: Return #t from all phases.
* gnu/packages/web.scm (java-eclipse-jetty-http-test-classes)[arguments]: Return #t
from 'chdir' phase.
2019-03-01 22:58:55 +01:00
Björn Höfling 176662a19d
gnu: java-eclipse-jetty-test-helper: Return #t from all phases.
* gnu/packages/web.scm (java-eclipse-jetty-test-helper)[arguments]: Return #t
from 'chdir' phase.
2019-03-01 22:58:55 +01:00
Björn Höfling ae69b39ed4
gnu: java-eclipse-sisu-inject: Don't use unstable tarball.
Using git-file-name also makes the source store-file nicer.

* gnu/packages/java.scm (java-eclipse-sisu-inject)[source]:  Use git-fetch and
git-file-name.
2019-03-01 22:58:55 +01:00
Björn Höfling d71cab2b77
gnu: java-tomcat: Update to 8.5.38.
* gnu/packages/web.scm (java-tomcat): Update to 8.38.
2019-03-01 22:58:55 +01:00
Dan Frumin 0b611996b9
gnu: coq-flocq: Update to 3.1.0.
* gnu/packages/coq.scm (coq-flocq): Update to 3.1.0.
(coq-interval): Update to 3.4.0.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-03-01 21:52:59 +01:00
Rutger Helling abfc114ae5
gnu: sdl2: Add KMSDRM video backend.
* gnu/packages/sdl.scm (sdl2): Add KMSDRM video backend.
2019-03-01 20:08:38 +01:00
Tobias Geerinckx-Rice 70c8b1ec30
gnu: acpica: Update to 20190215.
* gnu/packages/admin.scm (acpica): Update to 20190215.
2019-03-01 18:03:38 +01:00
Marius Bakke 81bb55459a
gnu: libssh: Update to 0.8.7.
* gnu/packages/ssh.scm (libssh): Update to 0.8.7.
2019-03-01 17:31:20 +01:00
Marius Bakke 3e493945e8
gnu: re2: Update to 2019-03-01.
* gnu/packages/regex.scm (re2): Update to 2019-03-01.
2019-03-01 17:31:19 +01:00
Marius Bakke 407e1dcb72
gnu: libqmi: Update to 1.22.2.
* gnu/packages/freedesktop.scm (libqmi): Update to 1.22.2.
2019-03-01 17:31:19 +01:00
Marius Bakke 6c5101f8b6
gnu: libqmi: Don't use NAME in source URI.
* gnu/packages/freedesktop.scm (libqmi)[source](uri): Hard-code NAME.
2019-03-01 17:31:19 +01:00
Marius Bakke 3fc700d276
gnu: python-cryptography: Update to 2.6.1.
* gnu/packages/python-crypto.scm (python-cryptography-vectors,
python-cryptography): Update to 2.6.1.
2019-03-01 17:31:19 +01:00
Marius Bakke 2833756643
gnu: OpenSSL: Update to 1.1.1b.
* gnu/packages/tls.scm (openssl-next): Update to 1.1.1b.
2019-03-01 17:31:19 +01:00
Marius Bakke 82e7a51ccd
gnu: efibootmgr: Remove obsolete configure flag.
* gnu/packages/linux.scm (efibootmgr)[arguments]: Don't override CFLAGS.
2019-03-01 17:31:19 +01:00
Marius Bakke 30559d8ffd
gnu: efibootmgr: Don't use NAME in source URI.
* gnu/packages/linux.scm (efibootmgr)[source](uri): Hard-code NAME.
2019-03-01 17:31:18 +01:00
Ricardo Wurmus a27ca96f10
gnu: Add velvet.
* gnu/packages/bioinformatics.scm (velvet): New variable.
2019-03-01 12:55:35 +01:00
Ricardo Wurmus 0ce256dc79
gnu: discrover: Remove indirect TexLive dependencies.
* gnu/packages/bioinformatics.scm (discrover)[native-inputs]: Remove
texlive-generic-ifxetex, texlive-latex-oberdiek, texlive-latex-url, and
texlive-latex-xcolor from texlive-union.
2019-03-01 12:55:35 +01:00
Ricardo Wurmus 0fc71e4b99
gnu: texlive-latex-pgf: Add missing input.
* gnu/packages/tex.scm (texlive-latex-pgf)[propagated-inputs]: Add
texlive-latex-xcolor.
2019-03-01 12:55:35 +01:00
Ricardo Wurmus 8983a52cb4
gnu: asymptote: Remove indirect TexLive dependency.
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Remove
texlive-generic-ifxetex from texlive-union.
2019-03-01 12:55:35 +01:00
Ricardo Wurmus 8412fa6cc7
gnu: hypre: Remove indirect TexLive dependencies.
* gnu/packages/maths.scm (hypre)[native-inputs]: Remove
texlive-latex-oberdiek, texlive-generic-ifxetex, and texlive-latex-url from
texlive-union.
2019-03-01 12:55:34 +01:00
Ricardo Wurmus a9cd7b0314
gnu: texlive-latex-oberdiek: Add ifxetex to inputs.
* gnu/packages/tex.scm (texlive-latex-oberdiek)[propagated-inputs]: Add
texlive-generic-ifxetex.
2019-03-01 12:55:34 +01:00
Ricardo Wurmus 2a0bcbf49a
gnu: texlive-latex-hyperref: Add missing inputs.
* gnu/packages/tex.scm (texlive-latex-hyperref)[propagated-inputs]: Add
texlive-latex-oberdiek and texlive-latex-url.
2019-03-01 12:55:34 +01:00
Ivan Petkov 7d141788b1
gnu: rust: Factor out "cargo-utils" from "cargo-build-system".
* guix/build/cargo-utils.scm: New file.
* Makefile.am (MODULES): Add it.
* guix/build-system/cargo.scm (%cargo-utils-modules): New variable.
(%cargo-build-system-modules): Use it.
* guix/build/cargo-build-system.scm (file-sha256, generate-checksums): Move
from here...
* guix/build/cargo-utils.scm: ...to here.
* gnu/packages/rust.scm (rust-1.19.0)[arguments]<#:imported-modules>: Use
%cargo-utils-modules.
<#:phases>[patch-cargo-checksums]: Use (guix build cargo-utils).
* gnu/packages/gnuzilla.scm (icecat):
[arguments]<#:imported-modules>: Use %cargo-utils-modules.
<#phases>[patch-cargo-checksums]: import (guix build cargo-utils).

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-01 08:20:50 +01:00
Tobias Geerinckx-Rice a215c938b3
gnu: openssl@1.1.1a: Don't inherit from openssl/fixed.
I was a bit hasty in a92c6b1a2b.
openssl-next replaces the source, and OpenSSL 1.1.1 is invulnerable.

* gnu/packages/tls.scm (openssl-next)[inherit]: Inherit from openssl
once more.
2019-03-01 00:12:36 +01:00
Tobias Geerinckx-Rice a92c6b1a2b
gnu: openssl: Fix CVE-2019-1559.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl/fixed): New variable.
(openssl-next)[inherit]: Inherit from it instead.
* gnu/packages/patches/openssl-CVE-2019-1559.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-03-01 00:00:16 +01:00
Tobias Geerinckx-Rice 8849109703
gnu: clementine: Use HTTPS home page.
* gnu/packages/music.scm (clementine)[home-page]: Use HTTPS.
2019-02-28 22:35:41 +01:00
Tobias Geerinckx-Rice ec0b94672b
gnu: libunwind: Update to 1.3.1.
* gnu/packages/libunwind.scm (libunwind): Update to 1.3.1.
2019-02-28 22:35:41 +01:00
Tobias Geerinckx-Rice 2a18b57222
gnu: netpbm: Fix CVE-2017-258[67].
* gnu/packages/netpbm.scm (netpbm)[source]: Add patches.
* gnu/packages/patches/netpbm-CVE-2017-2586.patch,
gnu/packages/patches/netpbm-CVE-2017-2587.patch: New files.
* gnu/local.mk: Fix missing copyright year.
(dist_patch_DATA): Add them.
2019-02-28 22:35:41 +01:00
Tobias Geerinckx-Rice 13966cbd5e
gnu: supercollider: Update to 3.10.2.
* gnu/packages/audio.scm (supercollider): Update to 3.10.2.
[arguments]: Remove ’apply-system-yaml-cpp-fix’ phase.
2019-02-28 22:35:40 +01:00
Marius Bakke c268c6a03e
gnu: speech-dispatcher: Build against eSpeak NG.
* gnu/packages/speech.scm (speech-dispatcher)[inputs]: Change from ESPEAK to
ESPEAK-NG.
2019-02-28 19:08:49 +01:00
Marius Bakke 7566afb1d2
gnu: Add eSpeak NG.
* gnu/packages/speech.scm (espeak-ng): New public variable.
2019-02-28 19:08:48 +01:00
Marius Bakke b8098cc691
gnu: Move espeak to speech.scm.
* gnu/packages/audio.scm (espeak): Move from here ...
* gnu/packages/speech.scm (espeak): ... to here.
2019-02-28 19:08:48 +01:00
Marius Bakke a4b71b32a7
gnu: Add pcaudiolib.
* gnu/packages/audio.scm (pcaudiolib): New public variable.
2019-02-28 19:08:48 +01:00
Marius Bakke 5d04ce48d1
gnu: speech-dispatcher: Update to 0.9.0.
* gnu/packages/speech.scm (speech-dispatcher): Update to 0.9.0.
[source](uri): Change to new upstream URI.
[arguments]: Add --with-kali and --with-baratinoo to #:configure-flags.
2019-02-28 19:08:48 +01:00
Marius Bakke 2422b1b450
gnu: speech-dispatcher: Don't build static libraries.
* gnu/packages/speech.scm (speech-dispatcher)[arguments]: New field.
2019-02-28 19:08:48 +01:00
Marius Bakke 14c272d5ce
gnu: GCC: Update to 8.3.0.
* gnu/packages/gcc.scm (gcc-8): Update to 8.3.0.
2019-02-28 19:08:48 +01:00
Marius Bakke 0ad4a12088
gnu: wpa_supplicant: Update to 2.7.
* gnu/packages/patches/wpa-supplicant-CVE-2017-13082.patch,
gnu/packages/patches/wpa-supplicant-CVE-2018-14526.patch,
gnu/packages/patches/wpa-supplicant-fix-key-reuse.patch,
gnu/packages/patches/wpa-supplicant-fix-nonce-reuse.patch,
gnu/packages/patches/wpa-supplicant-fix-zeroed-keys.patch,
gnu/packages/patches/wpa-supplicant-krack-followups.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.7.
[source](patches): Remove.
2019-02-28 19:08:48 +01:00
Efraim Flashner c643b49244
gnu: Add toot.
* gnu/packages/mastodon.scm (toot): New variable.
* gnu/local.mk (GNU_SYSTSEM_MODULES): Register it.
2019-02-28 08:56:59 +02:00
Nicolas Goaziou a9dac432d9
gnu: giac-xcas: Update to 1.5.0-43.
* gnu/packages/algebra.scm (giac-xcas): Update to 1.5.0-43.
2019-02-28 00:39:53 +01:00
Mark H Weaver 275beea9d8
gnu: linux-libre: Update to 4.20.13.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.13.
(%linux-libre-hash): Update hash.
2019-02-27 13:48:04 -05:00
Mark H Weaver fd5784d889
gnu: linux-libre@4.19: Update to 4.19.26.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.26.
(%linux-libre-4.19-hash): Update hash.
2019-02-27 13:47:15 -05:00
Mark H Weaver 70b1b5b7d0
gnu: linux-libre@4.14: Update to 4.14.104.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.104.
(%linux-libre-4.14-hash): Update hash.
2019-02-27 13:46:17 -05:00
Mark H Weaver c9ac753bce
gnu: linux-libre@4.9: Update to 4.9.161.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.161.
2019-02-27 13:45:27 -05:00
Pierre Neidhardt 933d810e16
gnu: emacs-disk-usage: Update to 1.2.0.
* gnu/packages/emacs-xyz.scm (emacs-disk-usage): Update to 1.2.0.
2019-02-27 17:09:22 +01:00
Tobias Geerinckx-Rice 4915894759
gnu: lmdb: Update to 0.9.23.
* gnu/packages/databases.scm (lmdb): Update to 0.9.23.
2019-02-27 15:48:53 +01:00
Tobias Geerinckx-Rice f167b432bb
gnu: lmdb: Don't use unstable tarball.
* gnu/packages/databases.scm (lmdb)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[arguments]: Adjust source directory name.
2019-02-27 15:48:53 +01:00
Tobias Geerinckx-Rice 7e17784cbe
gnu: sbcl: Update to 1.4.16.
* gnu/packages/lisp.scm (sbcl): Update to 1.4.16.
2019-02-27 15:48:52 +01:00
Tobias Geerinckx-Rice e17a0badef
gnu: libblockdev: Update to 2.21.
* gnu/packages/disk.scm (libblockdev): Update to 2.21.
2019-02-27 15:48:52 +01:00
Tobias Geerinckx-Rice 17c65da896
gnu: wesnoth: Update to 1.14.6.
* gnu/packages/games.scm (wesnoth): Update to 1.14.6.
[source]: Remove upstreamed patch.
* packages/patches/wesnoth-newer-boost.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-27 15:48:52 +01:00
Tobias Geerinckx-Rice 0c2e055e18
gnu: wesnoth: Don't use NAME in source URI.
* gnu/packages/games.scm (wesnoth)[source]: Hard-code NAME.
2019-02-27 15:48:52 +01:00
Tobias Geerinckx-Rice a4776d0981
gnu: ddrescue: Update to 1.24.
* gnu/packages/disk.scm (ddrescue): Update to 1.24.
2019-02-27 15:48:51 +01:00
Tobias Geerinckx-Rice 5fed63dda9
gnu: eog-plugins: Update to 3.26.3.
* gnu/packages/gnome.scm (eog-plugins): Update to 3.26.3.
2019-02-27 15:48:51 +01:00
Tobias Geerinckx-Rice f3b88ed26c
gnu: eog-plugins: Don't use NAME in source URI.
* gnu/packages/gnome.scm (eog-plugins)[source]: Hard-code NAME.
2019-02-27 15:48:51 +01:00
Tobias Geerinckx-Rice fbc930ec63
gnu: libwacom: Update to 0.32.
* gnu/packages/xdisorg.scm (libwacom): Update to 0.32.
2019-02-27 15:48:51 +01:00
Tobias Geerinckx-Rice cffdcbef1a
gnu: libwacom: Don't use NAME in source URI.
* gnu/packages/xdisorg.scm (libwacom)[source]: Hard-code NAME.
2019-02-27 15:48:50 +01:00
Tobias Geerinckx-Rice 6c8a0b6f5a
gnu: gom: Don't use NAME in source URI.
* gnu/packages/gnome.scm (gom)[source]: Hard-code NAME.
2019-02-27 15:48:50 +01:00
Tobias Geerinckx-Rice 54d80e31d6
gnu: libpipeline: Update to 1.5.1.
* gnu/packages/man.scm (libpipeline): Update to 1.5.1.
2019-02-27 15:48:50 +01:00
Tobias Geerinckx-Rice 0257294a61
gnu: mc: Update to 4.8.22.
* gnu/packages/mc.scm (mc): Update to 4.8.22.
[arguments]: ‘Fix’ failing test.
2019-02-27 15:48:50 +01:00
Ricardo Wurmus 8aa1ca85ac
gnu: flexbar: Fix reproducibility bug.
* gnu/packages/bioinformatics.scm (flexbar)[arguments]: Add phase
"do-not-tune-to-CPU".
2019-02-27 15:40:46 +01:00
Dimakakos Dimos d97283c3a6
gnu: emacs-projectile: Update to 2.0.0
* gnu/packages/emacs-xyz.scm (emacs-projectile): Update to 2.0.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-02-27 10:54:29 +02:00
Efraim Flashner 0b1fb0aa4c
gnu: fossil: Remove bundled libraries.
* gnu/packages/version-control.scm (fossil)[source]: Add snippet to
remove bundled libraries.
2019-02-27 10:38:12 +02:00
Jovany Leandro G.C 66d05055bb
gnu: fossil: Update to 2.8.
* gnu/packages/version-control.scm (fossil): Update to 2.8.
[inputs]: Remove sqlite, add sqlite@3.26.
[arguments]: Add custom phase to patch more shebangs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-02-27 10:38:12 +02:00
Efraim Flashner cfae5382fe
gnu: cflow: Update to 1.6.
* gnu/packages/code.scm (cflow): Update to 1.6.
2019-02-27 09:50:30 +02:00
Nicolas Goaziou 8d611ef085
gnu: musescore: Update to 3.0.3.
* gnu/packages/music.scm (musescore): Update to 3.0.3.
[source]: Remove now obsolete patch.
[arguments]: Do not use bundled (as a submodule) libcrashreporter-qt.
* gnu/packages/patches/musescore-fix-use_webengine.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Apply file removal.
2019-02-27 01:10:48 +01:00
Nicolas Goaziou 2dad4c910a
gnu: colobot: Update to 0.1.12-alpha.
* gnu/packages/games.scm (colobot): Update to 0.1.12-alpha.
[source]: Do not use unstable tarball.
[native-inputs]: Remove "colobot-data", now fetched with recursive
`git-fetch'.
2019-02-27 00:21:58 +01:00
Paul Garlick 3a261950ac
gnu: fenics-dolfin: Fix build.
* gnu/packages/simulation.scm (fenics-dolfin)[arguments]: Remove SNESTEST
mapping, no longer valid after update of PETSc to version 3.10.3.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-02-26 17:12:30 -05:00
Paul Garlick 758439cf4b
gnu: python-petsc4py: Update to 10.3.1.
* gnu/packages/maths.scm (python-petsc4py): Update to 10.3.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-02-26 17:12:29 -05:00
Gábor Boskovits 618631f368
gnu: openssh: Add libedit support.
* gnu/packages/ssh.scm (openssh)[native-inputs]: Add pkg-config.
[inputs]: Add libedit.
[arguments](configure-flags): Add --with-libedit.
2019-02-26 23:02:24 +01:00
Efraim Flashner 35aa016af1
gnu: beignet: Limit supported architectures.
* gnu/packages/opencl.scm (beignet)[supported-systems]: New field.
2019-02-26 22:26:35 +02:00
Gábor Boskovits 1094f1216f
gnu: libedit: Update to 20181209-3.1.
* gnu/packages/libedit.scm: (libedit): Update to 20181209-3.1.
2019-02-26 18:58:03 +01:00
Rutger Helling 6dcac92012
gnu: mgba: Add libelf input.
* gnu/packages/emulators.scm (mgba)[inputs]: Use libelf instead of elfutils.
2019-02-26 16:19:26 +01:00
Leo Famulari cc6731e928
gnu: Add hpenc.
* gnu/packages/crypto.scm (hpenc): New variable.
2019-02-26 00:02:00 -05:00
Yoshinori Arai 933ac939d6
gnu: Add nkf.
* gnu/packages/textutils.scm (nkf): New variable.
2019-02-25 23:16:48 -05:00
Timo Eisenmann 04b6e9c5df
gnu: twitchy: Update to 3.4.
* gnu/packages/video.scm: (twitchy): Update to 3.4.
[arguments]: Add phase 'patch-paths' to substitute in the absolute path to
'streamlink'.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-02-25 21:33:45 -05:00
Vagrant Cascadian 6dacaa70a0
gnu: diffoscope: Update to 112.
* gnu/packages/package-management (diffoscope): Update to 112.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-02-25 21:33:45 -05:00
Leo Famulari 848b3749b2
Revert "gnu: font-awesome: Update to 5.7.2."
This reverts commit 590b989c95.
2019-02-25 19:29:25 -05:00
Leo Famulari ef5fa91ccc
gnu: guile-emacs: Fetch source over HTTPS and be more idiomatic.
Fixes <https://bugs.gnu.org/27795>.

* gnu/packages/emacs.scm (guile-emacs)[source]: Use HTTPS.
Use git-version and git-file-name.
2019-02-25 18:23:14 -05:00
Leo Famulari 584dbd8568
gnu: librsync: Update to 2.0.2.
* gnu/packages/rsync.scm (librsync): Update to 2.0.2.
[source]: Update source URL.
[build-system]: Use cmake-build-system.
[inputs]: Add popt.
[arguments]: Remove field.
(librsync-0.9): New variable.
* gnu/packages/backup.scm (btar, duplicity, rdiff-backup)[inputs]: Use
librsync-0.9.
2019-02-25 18:23:06 -05:00
Clément Lassieur 089a2c51ff
gnu: Add emacs-amx.
* gnu/packages/emacs-xyz.scm (emacs-amx): New variable.
2019-02-25 18:44:52 +01:00
Rutger Helling e8ffa38289
gnu: mgba: Update to 0.7.1.
* gnu/packages/emulators.scm (mgba): Update to 0.7.1.
[inputs]: Add elfutils.
2019-02-25 16:34:35 +01:00
Rutger Helling 589ce84d17
gnu: Remove spice-protocol@0.12.14.
* gnu/packages/spice.scm (spice-protocol@0.12.14): Remove variable.
2019-02-25 16:00:20 +01:00
Rutger Helling 16a47f23f4
gnu: lookingglass: Update to commit 41f4166.
* gnu/packages/virtualization.scm (lookingglass): Update to commit 41f4166.
[inputs]: Add wayland.
2019-02-25 16:00:20 +01:00
Ricardo Wurmus cc842b58af
gnu: pigx-chipseq: Update to 0.0.21.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.21.
2019-02-25 15:40:12 +01:00
Ricardo Wurmus 3ca1d917b6
gnu: discrover: Replace "texlive" with a texlive-union.
* gnu/packages/bioinformatics.scm (discrover)[arguments]: Add build phase
"fix-latex-errors"; add build phase "setenv-HOME".
[inputs]: Add rmath-standalone.
[native-inputs]: Replace "texlive" with a texlive-union consisting of
texlive-fonts-cm, texlive-fonts-amsfonts, texlive-generic-ifxetex,
texlive-latex-doi, texlive-latex-examplep, texlive-latex-hyperref,
texlive-latex-ms, texlive-latex-natbib, texlive-bibtex,
texlive-latex-oberdiek, texlive-latex-pgf, texlive-latex-url,
texlive-latex-verbatimbox, and texlive-latex-xcolor.
2019-02-25 15:05:35 +01:00
Clément Lassieur 5c06a18503
gnu: gajim-omemo: Update to 2.6.27.
* gnu/packages/messaging.scm (gajim-omemo): Update to 2.6.27.
2019-02-25 13:33:07 +01:00
Tobias Geerinckx-Rice 9d391ccd10
gnu: asio: Update to 1.12.2.
* gnu/packages/networking.scm (asio): Update to 1.12.2.
2019-02-25 02:10:56 +01:00
Tobias Geerinckx-Rice 74a3ce308a
gnu: asio: Don't use NAME in source URI.
* gnu/packages/networking.scm (asio)[source]: Hard-code NAME.
2019-02-25 02:10:56 +01:00
Tobias Geerinckx-Rice 345eec8203
gnu: tcllib: Update to 1.19.
* gnu/packages/tcl.scm (tcllib): Update to 1.19.
2019-02-25 02:10:55 +01:00
Tobias Geerinckx-Rice f86f1531c9
gnu: tcllib: Don't use NAME in source URI.
* gnu/packages/tcl.scm (tcllib)[source]: Hard-code NAME.
2019-02-25 02:10:55 +01:00
Tobias Geerinckx-Rice f736e55021
gnu: ethtool: Update to 4.19.
* gnu/packages/networking.scm (ethtool): Update to 4.19.
2019-02-25 02:10:55 +01:00
Tobias Geerinckx-Rice 956a14b49f
gnu: ethtool: Don't use NAME in source URI.
* gnu/packages/networking.scm (ethtool)[source]: Hard-code NAME.
2019-02-25 02:10:55 +01:00
Tobias Geerinckx-Rice 63b9834d81
gnu: libqtxdg: Don't use NAME in source URI.
* gnu/packages/lxqt.scm (libqtxdg)[source]: Hard-code NAME.
2019-02-25 02:10:55 +01:00
Tobias Geerinckx-Rice 769921fef2
gnu: lxqt-build-tools: Don't use NAME in source URI.
* gnu/packages/lxqt.scm (lxqt-build-tools)[source]: Hard-code NAME.
2019-02-25 02:10:54 +01:00
Tobias Geerinckx-Rice ad0b91bde0
gnu: discount: Don't use NAME in source URI.
* gnu/packages/markup.scm (discount)[source]: Hard-code NAME.
2019-02-25 02:10:54 +01:00
Christopher Baines bb65f66ce0
services: desktop: Fix define for the upower-service procedure.
* gnu/services/desktop.scm (upower-service): Fill in the replacement for
upower-service.
2019-02-24 21:48:47 +00:00
Tobias Geerinckx-Rice c2e5047468
gnu: workrave: Update to 1.10.23.
* gnu/packages/gnome.scm (workrave): Update to 1.10.23.
[source]: Correct STRING-MAP.
2019-02-24 21:29:23 +01:00
Tobias Geerinckx-Rice abb90ff987
gnu: hdparm: Update to 9.58.
* gnu/packages/linux.scm (hdparm): Update to 9.58.
2019-02-24 21:29:22 +01:00
Tobias Geerinckx-Rice 1b1ef87ef1
gnu: hdparm: Don't use NAME in source URI.
* gnu/packages/linux.scm (hdparm)[source]: Hard-code NAME.
2019-02-24 21:29:22 +01:00
Tobias Geerinckx-Rice 8118a086bf
gnu: powertop: Update to 2.10.
* gnu/packages/linux.scm (powertop): Update to 2.10.
2019-02-24 21:29:22 +01:00
Tobias Geerinckx-Rice 063bc5f899
gnu: screengrab: Don't use NAME in source URI.
* gnu/packages/lxqt.scm (screengrab)[source]: Hard-code NAME.
2019-02-24 21:29:22 +01:00
Tobias Geerinckx-Rice bc9c3dc31e
gnu: fping: Update to 4.2.
* gnu/packages/networking.scm (fping): Update to 4.2.
2019-02-24 21:29:21 +01:00
Tobias Geerinckx-Rice c582ab2a39
gnu: gwenhywfar, aqbanking: Use HTTPS home page.
* gnu/packages/gnucash.scm (gwenhywfar, aqbanking)[home-page]: Use HTTPS.
2019-02-24 21:29:21 +01:00
Tobias Geerinckx-Rice f1f0390d4b
gnu: gnumeric: Update to 1.12.44.
* gnu/packages/gnome.scm (gnumeric): Update to 1.12.44.
2019-02-24 21:29:21 +01:00
Tobias Geerinckx-Rice b7fd0217e0
gnu: gnumeric: Don't use NAME in source URI.
* gnu/packages/gnome.scm (gnumeric)[source]: Hard-code NAME.
2019-02-24 21:29:20 +01:00
Tobias Geerinckx-Rice d74955606f
gnu: drumstick: Update to 1.1.2.
* gnu/packages/music.scm (drumstick): Update to 1.1.2.
2019-02-24 21:29:20 +01:00
Tobias Geerinckx-Rice cfb3bc053b
gnu: ktexteditor: Don't use NAME in source URI.
* gnu/packages/kde-frameworks.scm (ktexteditor)[source]: Hard-code NAME.
2019-02-24 21:29:20 +01:00
Tobias Geerinckx-Rice f79f49422e
gnu: ktexteditor: Return #t from all phases.
* gnu/packages/kde-frameworks.scm (ktexteditor)[arguments]: Always
return #t from phases.
2019-02-24 21:29:20 +01:00
Tobias Geerinckx-Rice d083a82309
gnu: font-hack: Future-proof description.
* gnu/packages/fonts.scm (font-hack)[description]: Use vague upstream wording.
2019-02-24 21:29:19 +01:00
Tobias Geerinckx-Rice 253a4bb23b
gnu: font-lato: Use HTTPS home page.
* gnu/packages/fonts.scm (font-lato)[source, home-page]: Use HTTPS.
2019-02-24 21:29:19 +01:00
Marius Bakke 6eb35d4a78
gnu: git: Update to 2.21.0.
* gnu/packages/version-control.scm (git): Update to 2.21.0.
2019-02-24 21:22:48 +01:00
Marius Bakke 191b07dfd0
gnu: GCC: Don't modify copyright headers in xtensa patch.
* gnu/packages/patches/ath9k-htc-firmware-gcc.patch: Drop hunk.
2019-02-24 21:22:48 +01:00
Tobias Geerinckx-Rice ddcda4ee12
gnu: libksysguard: Update to 5.15.1.
* gnu/packages/kde-plasma.scm (libksysguard): Update to 5.15.1.
2019-02-24 19:44:07 +01:00
Tobias Geerinckx-Rice 95c786758a
gnu: libkscreen: Update to 5.15.1.
* gnu/packages/kde-plasma.scm (libkscreen): Update to 5.15.1.
2019-02-24 19:44:07 +01:00
Tobias Geerinckx-Rice 3b6cfb427d
gnu: kscreenlocker: Update to 5.15.1.
* gnu/packages/kde-plasma.scm (kscreenlocker): Update to 5.15.1.
2019-02-24 19:44:07 +01:00
Tobias Geerinckx-Rice c31f2d01d4
gnu: kdecoration: Update to 5.15.1.
* gnu/packages/kde-plasma.scm (kdecoration): Update to 5.15.1.
2019-02-24 19:44:07 +01:00
Tobias Geerinckx-Rice 9296d4b66d
gnu: font-hack: Update to 3.003.
* gnu/packages/fonts.scm (font-hack): Update to 3.003.
2019-02-24 17:51:30 +01:00
Tobias Geerinckx-Rice 5d63272843
gnu: ragel: Update to 6.10.
* gnu/packages/ragel.scm (ragel): Update to 6.10.
2019-02-24 17:51:30 +01:00
Tobias Geerinckx-Rice da9e132055
gnu: ragel: Use HTTPS home page.
* gnu/packages/ragel.scm (ragel)[source, home-page]: Use HTTPS.
2019-02-24 17:51:30 +01:00
Tobias Geerinckx-Rice fc0dd636cc
gnu: bind: Update to 9.12.3-P4.
* gnu/packages/dns.scm (isc-bind): Update to 9.12.3-P4.
2019-02-24 17:51:30 +01:00
Tobias Geerinckx-Rice 54fd7c024b
gnu: bind: Don't use NAME in source URI.
* gnu/packages/dns.scm (isc-bind)[source]: Hard-code NAME.
2019-02-24 17:51:30 +01:00
Tobias Geerinckx-Rice 1584b9d680
gnu: autogen: Update to 5.18.16.
* gnu/packages/autogen.scm (autogen): Update to 5.18.16.
[inputs]: Update to guile-2.2.
[arguments]: Add ‘--disable-dependency-tracking’ to #:configure-flags.
Re-indent.
2019-02-24 17:51:29 +01:00
Tobias Geerinckx-Rice fcab568dea
gnu: clamav: Update to 0.101.1.
* gnu/packages/antivirus.scm (clamav): Update to 0.101.1.
[source]: Delete bundled tomsfastmath outright.
[native-inputs]: Remove bison and flex.
[inputs]: Switch to pcre2.
* gnu/packages/patches/clamav-system-tomsfastmath.patch: Update.
2019-02-24 17:51:29 +01:00
Tobias Geerinckx-Rice 545383fd04
gnu: parallel: Update to 20190222.
* gnu/packages/parallel.scm (parallel): Update to 20190222.
2019-02-24 17:51:29 +01:00
Tobias Geerinckx-Rice ed7dc85717
gnu: acpid: Update to 2.0.31.
* gnu/packages/linux.scm (acpid): Update to 2.0.31.
2019-02-24 17:51:29 +01:00
Tobias Geerinckx-Rice eea4a0910c
gnu: 4ti2: Update to 1.6.9.
* gnu/packages/maths.scm (4ti2): Update to 1.6.9.
[source]: Update URI.
2019-02-24 17:51:28 +01:00
Tobias Geerinckx-Rice d9c8009832
gnu: agda: Update to 2.5.4.2.
* gnu/packages/agda.scm (agda): Update to 2.5.4.2.
[inputs]: Remove cpphs.
2019-02-24 17:51:28 +01:00
Tobias Geerinckx-Rice 29ff0474f4
gnu: perl-net-idn-encode: Update to 2.500.
* gnu/packages/perl.scm (perl-net-idn-encode): Update to 2.500.
Re-indent.
2019-02-24 13:37:05 +01:00