2ccd850192
gnu: r-gqtlstats: Update to 1.10.1.
...
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.10.1.
2017-12-19 20:35:04 +01:00
28d25d037e
gnu: r-rtracklayer: Update to 1.38.2.
...
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.2.
2017-12-19 20:35:04 +01:00
d41f678420
gnu: r-limma: Update to 3.34.4.
...
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.34.4.
2017-12-19 20:35:03 +01:00
ab0dd8ac10
gnu: r-edger: Update to 3.20.2.
...
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.2.
2017-12-19 20:35:03 +01:00
7665fb39f5
gnu: r-biocstyle: Update to 2.6.1.
...
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.6.1.
2017-12-19 20:35:03 +01:00
756ac7254c
gnu: r-dexseq: Update to 1.24.2.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.2.
2017-12-19 20:35:03 +01:00
8d11ef4470
gnu: r-vegan: Update to 2.4-5.
...
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-5.
2017-12-19 20:35:02 +01:00
f1a2b1cb20
gnu: r-seurat: Update to 2.1.0.
...
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.1.0.
[propagated-inputs]: Add r-diffusionmap, r-dtw, r-ggjoy, r-hmisc, r-ica,
r-mass, r-matrix, r-nmf, r-plotly, r-sdmtools, r-tidyr; remove r-plyr,
r-rcppeigen, r-fastica.
2017-12-18 12:01:35 +01:00
8271b8d22a
gnu: r-seurat: Fix ModularityOptimizer.jar.
...
* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class
attribute in manifest.
2017-12-18 12:01:34 +01:00
6098a386a9
gnu: bedtools: Update to 2.27.1.
...
* gnu/packages/ruby.scm (bedtools): Update to 2.27.1.
2017-12-15 13:56:51 +10:00
4e0b3583ea
gnu: diamond: Update to 0.9.14.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.14.
2017-12-14 22:50:10 +10:00
9cf5f134d5
gnu: Switch to using the version-major procedure.
...
* gnu/packages/audio.scm (ardour)[arguments]: Switch to using version-major.
(hmmer)[source]: Switch to using version-major.
(pidgin)[native-search-paths]: Switch to using version-major.
(r-minimal)[source]: Switch to using version-major.
2017-12-11 19:12:33 +00:00
83b9d121a7
gnu: bedtools-2.18: Fix build.
...
* gnu/packages/bioinformatics.scm (bedtools-2.18)[arguments]: Restore custom
install phase.
Reported by Mark H Weaver <mhw@netris.org>.
2017-12-09 13:01:15 +01:00
0d9824cc12
gnu: bedtools: Update to 2.27.0.
...
* gnu/packages/bioinformatics.scm (bedtools): Update to 2.27.0.
[arguments]: Remove custom "install" phase; specify prefix.
2017-12-06 19:13:35 +01:00
d112e5a8c2
gnu: Add kallisto.
...
* gnu/packages/bioinformatics.scm (kallisto): New variable.
2017-12-03 18:38:58 +01:00
117d8cc40e
gnu: jellyfish: Update to 2.2.7.
...
* gnu/packages/bioinformatics.scm (jellyfish): Update to 2.2.7.
[native-inputs]: Add pkg-config.
[inputs]: Add htslib.
2017-11-30 17:38:36 +01:00
9b8d02011f
gnu: r-annotationhub: Update to 2.10.1.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.10.1.
2017-11-30 17:28:24 +01:00
87e91a9fff
gnu: r-msnid: Update to 1.12.1.
...
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.12.1.
2017-11-30 17:28:23 +01:00
439492654b
gnu: r-maldiquant: Update to 1.17.
...
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.17.
2017-11-30 17:28:23 +01:00
06e8e0fc6c
gnu: r-genomicalignments: Update to 1.14.1.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.14.1.
2017-11-30 17:28:22 +01:00
1ce5d32b49
gnu: r-limma: Update to 3.34.2.
...
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.34.2.
2017-11-30 17:28:22 +01:00
8131cf4162
gnu: r-variantannotation: Update to 1.24.2.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.24.2.
2017-11-30 17:28:21 +01:00
d2081a17ed
gnu: r-getopt: Update to 1.20.1.
...
* gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.1.
2017-11-30 17:28:20 +01:00
4220ab0c81
gnu: r-gseabase: Update to 1.40.1.
...
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.40.1.
2017-11-30 17:28:20 +01:00
d259932ca8
gnu: r-dexseq: Update to 1.24.1.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.1.
2017-11-30 17:28:19 +01:00
058644c0f2
gnu: r-deseq2: Update to 1.18.1.
...
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.18.1.
2017-11-30 17:28:18 +01:00
654c29aceb
gnu: r-annotate: Update to 1.56.1.
...
* gnu/packages/bioinformatics.scm (r-annotate): Update to 1.56.1.
2017-11-30 17:28:18 +01:00
9364a520ce
gnu: metabat: Use scons-build-system.
...
* gnu/packages/bioinformatics.scm (metabat): Switch to scons-build-system.
2017-11-30 18:19:32 +05:30
1fd904fb38
gnu: Update r-mutationalpatterns to 1.4.1.
...
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.4.1.
2017-11-29 14:56:28 +01:00
efa6a1ddb5
gnu: Add r-copynumber.
...
* gnu/packages/bioinformatics.scm (r-copynumber): New variable.
2017-11-29 12:46:17 +01:00
d7f24778de
gnu: Add java-picard-1.113.
...
* gnu/packages/bioinformatics.scm (java-picard-1.113): New variable.
2017-11-27 12:12:41 +01:00
d7fed31ad2
gnu: Add java-picard.
...
* gnu/packages/bioinformatics.scm (java-picard): New variable.
2017-11-27 12:12:40 +01:00
bd94b6f850
gnu: java-htsjdk: Update to 2.3.0.
...
* gnu/packages/bioinformatics.scm (java-htsjdk): Update to 2.3.0.
[arguments]: Build with JDK 8.
[inputs]: Add java-ngs, java-snappy, java-commons-compress,
java-commons-logging-minimal, java-commons-jexl-2, and java-xz.
[native-inputs]: Add java-testng.
2017-11-27 12:12:40 +01:00
35e78aaa25
gnu: r-rhdf5: Fix build phase.
...
* gnu/packages/bioinformatics.scm (r-rhdf5)[arguments]: Fix "unpack-smallhdf5"
phase.
2017-11-27 12:11:52 +01:00
e6debcaf02
gnu: subread: Update to 1.6.0.
...
* gnu/packages/bioinformatics.scm (subread): Update to 1.6.0.
2017-11-23 13:16:12 +01:00
aa33cc29ca
gnu: idr: Update to 2.0.3.
...
* gnu/packages/bioinformatics.scm (idr): Update to 2.0.3.
[source]: Add snippet to remove generated code.
2017-11-21 23:17:43 +01:00
40590caf3b
gnu: idr: Correct license.
...
* gnu/packages/bioinformatics.scm (idr)[license]: Change to GPLv2+.
2017-11-21 23:17:43 +01:00
261b38a978
gnu: r-genomeinfodbdata: Update to 0.99.1.
...
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Update to 0.99.1.
2017-11-18 11:18:41 +01:00
592f4a9434
gnu: r-go-db: Update to 3.5.0.
...
* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.5.0.
2017-11-18 11:18:41 +01:00
e4664290ce
gnu: r-org-ce-eg-db: Update to 3.5.0.
...
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.5.0.
2017-11-18 11:18:40 +01:00
19fc299f68
gnu: r-org-dm-eg-db: Update to 3.5.0.
...
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.5.0.
2017-11-18 11:18:40 +01:00
f3569f5218
gnu: r-org-mm-eg-db: Update to 3.5.0.
...
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.5.0.
2017-11-18 11:18:40 +01:00
57dc9b58db
gnu: r-genomationdata: Update to 1.10.0.
...
* gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.10.0.
2017-11-18 11:18:39 +01:00
90dbd984f8
gnu: Remove duplicate from (gnu packages bioinformatics).
...
* gnu/packages/bioinformatics.scm (r-annotationfilter): Remove duplicate.
2017-11-18 11:18:39 +01:00
676507e388
gnu: r-org-hs-eg-db: Clarify description.
...
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db)[description]: Clarify.
2017-11-18 11:18:38 +01:00
d595fed33d
gnu: r-org-hs-eg-db: Update to 3.5.0.
...
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.5.0.
2017-11-18 11:18:37 +01:00
ccedfd3a43
gnu: r-org-hs-eg-db: Remove duplicate package definition.
...
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Remove duplicate variable.
2017-11-18 11:18:37 +01:00
ac257f127a
gnu: Move testing packages from python.scm to check.scm.
...
* gnu/packages/python.scm (python-behave-web-api, python2-behave-web-api,
python-mock, python2-mock, python-mock-2, python-nose, python2-nose,
python-nose2, python2-nose2, python-unittest2, python2-unittest2,
python-pytest, python2-pytest, python-pytest-3.0, python2-pytest-3.0,
python-pytest-cov, python2-pytest-cov, python-pytest-runner,
python2-pytest-runner, python-pytest-mock, python2-pytest-mock,
python-pytest-xdist, python2-pytest-xdist, python-scripttest,
python2-scripttest, python-testtools, python2-testtools, python-testscenarios,
python2-testscenarios, python-testresources, python2-testresources,
python-subunit, python2-subunit, python-fixtures, python2-fixtures,
python-testrepository, python2-testrepository, python-coverage,
python2-coverage, python-cov-core, python2-cov-core, python-testpath,
python2-testpath, python-testlib, python2-testlib, python-pytest-cache,
python2-pytest-cache, python-pytest-localserver, python-pytest-xprocess,
python-pytest-subtesthack, python2-pytest-subtesthack, python-hypothesis,
python2-hypothesis, python-lit, python2-lit, python-pytest-pep8,
python2-pytest-pep8, python-pytest-flakes, python2-pytest-flakes,
python2-coverage-test-runner, python-pylint, python2-pylint,
python-paramunittest, python2-python-paramunittest, python-pytest-warnings,
python2-pytest-warnings, python-pytest-capturelog, python2-pytest-capturelog,
python-pytest-catchlog, python2-pytest-catchlog, python-nosexcover,
python2-nosexcover, python-discover, python2-discover, behave, python-rednose,
python2-rednose, python-nose-randomly, python2-nose-randomly,
python-nose-timer, python2-nose-timer): Move from here...
* gnu/packages/check.scm: ...to here.
* gnu/packages/admin.scm,
gnu/packages/android.scm,
gnu/packages/backup.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/calendar.scm,
gnu/packages/dav.scm,
gnu/packages/django.scm,
gnu/packages/freedesktop.scm,
gnu/packages/haskell.scm,
gnu/packages/image.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/ldc.scm,
gnu/packages/libffi.scm,
gnu/packages/mail.scm,
gnu/packages/mpd.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/password-utils.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/rdf.scm,
gnu/packages/statistics.scm,
gnu/packages/storage.scm,
gnu/packages/time.scm,
gnu/packages/tls.scm,
gnu/packages/tor.scm,
gnu/packages/tryton.scm: Adjust accordingly.
2017-11-17 22:36:26 +01:00
589e3f4e70
gnu: Move more packages from python to python-web.
...
* gnu/packages/python.scm (python-requests, python2-requests)
(python-requests-2.7, python-oauthlib, python2-oauthlib)
(python-furl, python2-furl, python-wsgi-intercept)
(python-publicsuffix, python2-publicsuffix)
(python-publicsuffix2, python2-publicsuffix2): Move to...
* gnu/packages/python-web.scm: ... here.
* gnu/packages/bioinformatics.scm, gnu/packages/finance.scm:
gnu/packages/maths.scm, gnu/packages/terminals.scm,
gnu/packages/video.scm, gnu/packages/virtualization.scm: Adjust
accordingly.
2017-11-16 08:45:15 +01:00
a68e586097
gnu: diamond: Update to 0.9.13.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.13.
2017-11-14 08:25:43 +10:00
5ccde2079e
gnu: Move test packages from perl to perl-check.
...
* gnu/packages/perl.scm (perl-test2-bundle-extended,
perl-test2-plugin-nowarnings, perl-test-base, perl-test-class,
perl-test-class-most, perl-test-cleannamespaces, perl-test-command,
perl-test-cpan-meta, perl-test-cpan-meta-json, perl-test-deep,
perl-test-differences, perl-test-directory, perl-test-eol,
perl-test-exception, perl-test-fatal, perl-test-file-sharedir-dist,
perl-test-files, perl-test-harness, perl-test-leaktrace,
perl-test-longstring, perl-test-manifest, perl-test-memory-cycle,
perl-test-mockobject, perl-test-mocktime, perl-test-most, perl-test-needs,
perl-test-notabs, perl-test-nowarnings, perl-test-number-delta,
perl-test-output, perl-test-pod, perl-test-pod-coverage, perl-test-requires,
perl-test-script, perl-test-sharedfork, perl-test-simple, perl-test-taint,
perl-test-tester, perl-test-trap, perl-test-utf8, perl-test-warn,
perl-test-warnings, perl-test-without-module, perl-test-writevariants,
perl-test-yaml, perl-test-trailingspace): Move variables to ...
* gnu/packages/perl-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/glib.scm,
gnu/packages/gnupg.scm,
gnu/packages/image-viewers.scm,
gnu/packages/language.scm,
gnu/packages/networking.scm,
gnu/packages/package-management.scm,
gnu/packages/perl.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/version-control.scm,
gnu/packages/web.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm: Use perl-check module.
2017-11-13 23:03:01 +01:00
d4735e8c65
gnu: cd-hit: Update source tarball hash.
...
* gnu/packages/bioinformatics.scm (cd-hit)[source]: Update hash.
2017-11-13 16:02:35 +01:00
11ed4108fb
gnu: methylkit: Use new home page.
...
* gnu/packages/bioinformatics.scm (methylkit)[home-page]: Update.
2017-11-11 05:17:58 +01:00
7c087150ec
gnu: vsearch: Update to 2.6.0.
...
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.6.0.
2017-11-11 09:33:16 +10:00
0af4df7e61
gnu: cutadapt: Update to 1.14.
...
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.14.
2017-11-10 15:32:42 +01:00
da4a707c88
gnu: roary: Update to 3.11.0.
...
* gnu/packages/bioinformatics.scm (roary): Update to 3.11.0.
[inputs]: Add perl-digest-md5-file.
2017-11-09 18:12:32 +10:00
34260a10d7
gnu: miso: Use pypi-uri.
...
* gnu/packages/bioinformatics.scm (miso)[source]: Use pypi-uri.
2017-11-08 17:41:08 +01:00
c49102ecca
gnu: Add r-hitc.
...
* gnu/packages/bioinformatics.scm (r-hitc): New variable.
2017-11-07 23:32:45 +01:00
30eb4e37c8
gnu: Add r-fithic.
...
* gnu/packages/bioinformatics.scm (r-fithic): New variable.
2017-11-07 23:32:45 +01:00
fbf5440637
gnu: Add r-sushi.
...
* gnu/packages/bioinformatics.scm (r-sushi): New variable.
2017-11-07 23:32:45 +01:00
2e4ce60e7c
gnu: Add r-gwascat.
...
* gnu/packages/bioinformatics.scm (r-gwascat): New variable.
2017-11-07 23:32:44 +01:00
4272000661
gnu: Add r-gviz.
...
* gnu/packages/bioinformatics.scm (r-gviz): New variable.
2017-11-07 23:32:44 +01:00
794ff347a9
gnu: Add r-gqtlstats.
...
* gnu/packages/bioinformatics.scm (r-gqtlstats): New variable.
2017-11-07 23:32:44 +01:00
66c39102e5
gnu: Add r-ldblock.
...
* gnu/packages/bioinformatics.scm (r-ldblock): New variable.
2017-11-07 23:32:44 +01:00
15f98b0d23
gnu: Add r-erma.
...
* gnu/packages/bioinformatics.scm (r-erma): New variable.
2017-11-07 23:32:43 +01:00
421c68e3f7
gnu: Add r-homo-sapiens.
...
* gnu/packages/bioinformatics.scm (r-homo-sapiens): New variable.
2017-11-07 23:32:43 +01:00
b52a866d14
gnu: Add r-org-hs-eg-db.
...
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): New variable.
2017-11-07 23:32:43 +01:00
dd5fc8b78e
gnu: Add r-snpstats.
...
* gnu/packages/bioinformatics.scm (r-snpstats): New variable.
2017-11-07 23:32:43 +01:00
e2b927993e
gnu: Add r-gqtlbase.
...
* gnu/packages/bioinformatics.scm (r-gqtlbase): New variable.
2017-11-07 23:32:43 +01:00
96a392a0b2
gnu: Add r-gprofiler.
...
* gnu/packages/bioinformatics.scm (r-gprofiler): New variable.
2017-11-07 23:32:42 +01:00
60faf94597
gnu: Add r-ggbio.
...
* gnu/packages/bioinformatics.scm (r-ggbio): New variable.
2017-11-07 23:32:42 +01:00
7af1f40373
gnu: Add r-biovizbase.
...
* gnu/packages/bioinformatics.scm (r-biovizbase): New variable.
2017-11-07 23:32:42 +01:00
2f6f61fd8e
gnu: Add r-organismdbi.
...
* gnu/packages/bioinformatics.scm (r-organismdbi): New variable.
2017-11-07 23:32:42 +01:00
aa30ab5aee
gnu: Add r-ensembldb.
...
* gnu/packages/bioinformatics.scm (r-ensembldb): New variable.
2017-11-07 23:32:42 +01:00
763e98103a
gnu: Add r-annotationfilter.
...
* gnu/packages/bioinformatics.scm (r-annotationfilter): New variable.
2017-11-07 23:32:42 +01:00
04e2a2e969
gnu: Add r-dirichletmultinomial.
...
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): New variable.
2017-11-07 23:32:41 +01:00
3af149f524
gnu: Add r-complexheatmap.
...
* gnu/packages/bioinformatics.scm (r-complexheatmap): New variable.
2017-11-07 23:32:41 +01:00
902fb15d92
gnu: Add r-genomicfiles.
...
* gnu/packages/bioinformatics.scm (r-genomicfiles): New variable.
2017-11-07 23:32:41 +01:00
e160aa1f81
gnu: Add r-gage.
...
* gnu/packages/bioinformatics.scm (r-gage): New variable.
2017-11-07 12:39:51 +01:00
3121814ef1
gnu: Add r-keggrest.
...
* gnu/packages/bioinformatics.scm (r-keggrest): New variable.
2017-11-07 12:39:51 +01:00
baa00ee90d
gnu: r-msnbase: Update to 2.4.0.
...
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.4.0.
[propagated-inputs]: Add r-lattice; remove r-reshape2.
2017-11-07 08:15:44 +01:00
39d9098def
gnu: r-mutationalpatterns: Update to 1.4.0.
...
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.4.0.
[propagated-inputs]: Add r-cowplot, r-ggdendro, and r-s4vectors.
2017-11-07 08:15:44 +01:00
14b3c71911
gnu: r-annotationhub: Update to 2.10.0.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.10.0.
[propagated-inputs]: Add r-curl.
2017-11-07 08:15:44 +01:00
15ca195979
gnu: r-mzr: Remove bundled copy of boost.
...
* gnu/packages/bioinformatics.scm (r-mzr)[source]: Remove boost source.
[arguments]: Add build phase "use-system-boost" to link with our boost
package and avoid building the bundled sources.
2017-11-07 08:15:44 +01:00
34b9675449
gnu: r-mzr: Update to 2.12.0.
...
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.12.0.
2017-11-07 08:15:43 +01:00
b500dbcdef
gnu: r-mzid: Update to 1.16.0.
...
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.16.0.
2017-11-07 08:15:43 +01:00
eeaa6967f9
gnu: r-chipseq: Update to 1.28.0.
...
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.28.0.
[propagated-inputs]: Add r-lattice.
2017-11-07 08:15:43 +01:00
158b6743dc
gnu: r-genomicfeatures: Update to 1.30.0.
...
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.30.0.
[propagated-inputs]: Add r-rmysql.
2017-11-07 08:15:43 +01:00
4dd469ef6d
gnu: r-rtracklayer: Update to 1.38.0.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.0.
[arguments]: Adjust patch to use system zlib.
2017-11-07 08:15:42 +01:00
a044c7f4c4
gnu: r-biocparallel: Update to 1.12.0.
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* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.12.0.
[propagated-inputs]: Add r-bh.
2017-11-07 08:15:42 +01:00
42e11d3301
gnu: r-biomart: Update to 2.34.0.
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* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.34.0.
[propagated-inputs]: Add r-progress and r-stringr.
2017-11-07 08:15:42 +01:00
010ab2ffd2
gnu: r-edger: Update to 3.20.1.
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* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.1.
[propagated-inputs]: Add r-rcpp.
2017-11-07 08:15:42 +01:00
eb3f5cc76a
gnu: r-gostats: Update to 2.44.0.
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* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.44.0.
[propagated-inputs]: Add r-rgraphviz.
2017-11-07 08:15:41 +01:00
2404cc4283
gnu: r-category: Update to 2.44.0.
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* gnu/packages/bioinformatics.scm (r-category): Update to 2.44.0.
[propagated-inputs]: Remove r-rsqlite; add r-dbi.
2017-11-07 08:15:41 +01:00
1be0f53664
gnu: r-vsn: Update to 3.46.0.
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* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.46.0.
[propagated-inputs]: Remove r-hexbin.
2017-11-07 08:15:40 +01:00
007424b5a5
gnu: r-motifrg: Rename input label.
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* gnu/packages/bioinformatics.scm (r-motifrg)[propagated-inputs]:
Rename label of r-bsgenome-hsapiens-ucsc-hg19.
2017-11-07 08:15:40 +01:00
ce59d62519
gnu: r-motifrg: Update to 1.22.0.
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* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.22.0.
2017-11-07 08:15:40 +01:00
98791c25c8
gnu: r-qvalue: Update to 2.10.0.
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* gnu/packages/bioinformatics.scm (r-qvalue): Update to 2.10.0.
2017-11-07 08:15:39 +01:00
87fa5aface
gnu: r-fastseq: Update to 1.24.0.
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* gnu/packages/bioinformatics.scm (r-fastseq): Update to 1.24.0.
2017-11-07 08:15:39 +01:00
1567c8d91b
gnu: r-interactivedisplaybase: Update to 1.16.0.
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* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to
1.16.0.
2017-11-07 08:15:39 +01:00
Ricardo Wurmus