Commit Graph

29276 Commits (2f28ffd81d72307fb3ddf775662c74bac92101a5)

Author SHA1 Message Date
Tobias Geerinckx-Rice b590951ff2
gnu: meandmyshadow: Update home page.
* gnu/packages/games.scm (meandmyshadow)[home-page]: Follow permanent
redirect.
2018-10-31 02:31:18 +01:00
Tobias Geerinckx-Rice 1d9a9d27ae
gnu: meandmyshadow: Update to 0.5.
* gnu/packages/games.scm (meandmyshadow): Update to 0.5.
[source]: Add unreleased bugfix patch.
[arguments]: Remove obsolete ‘set-sdl'paths’ phase.
[inputs]: Switch to SDL 2. Add lua. Remove libx11, mesa, and glu.
* gnu/packages/patches/meandmyshadow-define-paths-earlier.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-10-31 02:31:18 +01:00
Tobias Geerinckx-Rice 4cae7e67f3
gnu: hyperrogue: Update to 10.4x.
* gnu/packages/games.scm (hyperrogue): Update to 10.4x.
2018-10-30 23:40:43 +01:00
Tobias Geerinckx-Rice 21fc352bad
gnu: yosys: Don't use unstable tarball.
* gnu/packages/fpga.scm (yosys)[source]: Use GIT-FETCH and GIT-FILE-NAME.
2018-10-30 23:40:43 +01:00
Tobias Geerinckx-Rice becee7029f
gnu: disorderfs: Update to 0.5.5.
* gnu/packages/file-systems.scm (disorderfs): Update to 0.5.5.
2018-10-30 23:40:42 +01:00
Tobias Geerinckx-Rice 58cd3123ac
gnu: pulseview: Update to 0.4.1.
* gnu/packages/electronics.scm (pulseview): Update to 0.4.1.
[arguments]: Remove CMAKE_CXX_FLAGS from #:configure-flags. (Keep)
build(ing) the unit tests. Add a ‘remove-empty-doc-directory’ phase.
2018-10-30 23:40:42 +01:00
Tobias Geerinckx-Rice 61c58b7827
gnu: sigrok-cli: Update to 0.7.1.
* gnu/packages/electronics.scm (sigrok-cli): Update to 0.7.1.
2018-10-30 23:40:42 +01:00
Tobias Geerinckx-Rice 295fc4152a
gnu: cloc: Update to 1.80.
* gnu/packages/code.scm (cloc): Update to 1.80.
2018-10-30 23:40:42 +01:00
Tobias Geerinckx-Rice 1204402a90
gnu: python-partd: Update to 0.3.9.
* gnu/packages/python.scm (python-partd): Update to 0.3.9.
2018-10-30 23:40:42 +01:00
Ricardo Wurmus fd649d1e68
gnu: Add r-r2glmm.
* gnu/packages/cran.scm (r-r2glmm): New variable.
2018-10-30 22:47:35 +01:00
Ricardo Wurmus 7c02dd6268
gnu: Add r-lmertest.
* gnu/packages/cran.scm (r-lmertest): New variable.
2018-10-30 22:47:26 +01:00
Ricardo Wurmus 49863fd695
gnu: Add r-afex.
* gnu/packages/cran.scm (r-afex): New variable.
2018-10-30 22:47:18 +01:00
Ricardo Wurmus 20ff6e3a34
gnu: Add r-mvabund.
* gnu/packages/cran.scm (r-mvabund): New variable.
2018-10-30 22:47:10 +01:00
Ricardo Wurmus 4fb35ebd8d
gnu: Add r-rcppgsl.
* gnu/packages/cran.scm (r-rcppgsl): New variable.
2018-10-30 22:47:00 +01:00
Ricardo Wurmus 373cef0a0c
gnu: Add r-tweedie.
* gnu/packages/cran.scm (r-tweedie): New variable.
2018-10-30 22:46:47 +01:00
Ricardo Wurmus 32499b26e6
gnu: Add r-clusteval.
* gnu/packages/cran.scm (r-clusteval): New variable.
2018-10-30 22:13:01 +01:00
Ricardo Wurmus 7a06cdfa8c
gnu: r-analytics: Update to 3.0.
* gnu/packages/cran.scm (r-analytics): Update to 3.0.
[propagated-inputs]: Add r-vim.
2018-10-30 21:48:10 +01:00
Ricardo Wurmus e5f9e9fa79
gnu: r-radiant-data: Update to 0.9.7.
* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.7.
[propagated-inputs]: Add r-shinyfiles and r-summarytools.
2018-10-30 21:48:10 +01:00
Ricardo Wurmus 39528a5ee9
gnu: r-pracma: Update to 2.1.8.
* gnu/packages/maths.scm (r-pracma): Update to 2.1.8.
[propagated-inputs]: Remove r-quadprog.
2018-10-30 21:48:10 +01:00
Ricardo Wurmus 4633c8e6fc
gnu: r-shinydashboard: Update to 0.7.1.
* gnu/packages/web.scm (r-shinydashboard): Update to 0.7.1.
[propagated-inputs]: Add r-promises.
2018-10-30 21:48:10 +01:00
Ricardo Wurmus 65279cc8f3
gnu: Add r-shinyfiles.
* gnu/packages/web.scm (r-shinyfiles): New variable.
2018-10-30 21:48:10 +01:00
Ricardo Wurmus a056e2251e
gnu: r-htmlwidgets: Update to 1.3.
* gnu/packages/web.scm (r-htmlwidgets): Update to 1.3.
2018-10-30 21:48:10 +01:00
Ricardo Wurmus f697ef4a0d
gnu: r-servr: Update to 0.11.
* gnu/packages/web.scm (r-servr): Update to 0.11.
2018-10-30 21:48:10 +01:00
Ricardo Wurmus 8871a51350
gnu: r-webshot: Update to 0.5.1.
* gnu/packages/cran.scm (r-webshot): Update to 0.5.1.
[propagated-inputs]: Add r-callr; remove r-processx and r-withr.
2018-10-30 21:48:09 +01:00
Ricardo Wurmus d42f741035
gnu: r-dendextend: Update to 1.9.0.
* gnu/packages/cran.scm (r-dendextend): Update to 1.9.0.
2018-10-30 21:48:09 +01:00
Ricardo Wurmus 31c8d9fe00
gnu: r-emmeans: Update to 1.3.0.
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.0.
2018-10-30 21:48:09 +01:00
Ricardo Wurmus bec74196ea
gnu: r-abps: Update to 0.3.
* gnu/packages/cran.scm (r-abps): Update to 0.3.
2018-10-30 21:48:09 +01:00
Ricardo Wurmus 464676a970
gnu: r-proc: Update to 1.13.0.
* gnu/packages/cran.scm (r-proc): Update to 1.13.0.
2018-10-30 21:48:03 +01:00
Ricardo Wurmus 71d995392b
gnu: r-rdpack: Update to 0.10-1.
* gnu/packages/cran.scm (r-rdpack): Update to 0.10-1.
2018-10-30 21:47:54 +01:00
Ricardo Wurmus 081af9fae7
gnu: r-hdf5r: Update to 1.0.1.
* gnu/packages/cran.scm (r-hdf5r): Update to 1.0.1.
2018-10-30 21:47:46 +01:00
Ricardo Wurmus 08645fcff5
gnu: r-fansi: Update to 0.4.0.
* gnu/packages/cran.scm (r-fansi): Update to 0.4.0.
2018-10-30 21:47:37 +01:00
Ricardo Wurmus 7608984fe9
gnu: r-later: Update to 0.7.5.
* gnu/packages/cran.scm (r-later): Update to 0.7.5.
2018-10-30 21:47:28 +01:00
Ricardo Wurmus 80234d3294
gnu: r-maptools: Update to 0.9-4.
* gnu/packages/cran.scm (r-maptools): Update to 0.9-4.
2018-10-30 21:47:20 +01:00
Ricardo Wurmus fda8dd58c2
gnu: r-shinyace: Update to 0.3.2.
* gnu/packages/cran.scm (r-shinyace): Update to 0.3.2.
2018-10-30 21:47:06 +01:00
Ricardo Wurmus 02c57c018a
gnu: r-np: Update to 0.60-9.
* gnu/packages/cran.scm (r-np): Update to 0.60-9.
2018-10-30 21:46:57 +01:00
Ricardo Wurmus 44de41b572
gnu: r-expm: Update to 0.999-3.
* gnu/packages/cran.scm (r-expm): Update to 0.999-3.
2018-10-30 21:46:48 +01:00
Ricardo Wurmus 484e81f73a
gnu: r-cubature: Update to 1.4-1.
* gnu/packages/cran.scm (r-cubature): Update to 1.4-1.
2018-10-30 21:46:36 +01:00
Ricardo Wurmus 905734fd7c
gnu: r-extradistr: Update to 1.8.10.
* gnu/packages/cran.scm (r-extradistr): Update to 1.8.10.
2018-10-30 21:46:26 +01:00
Ricardo Wurmus 534bf85b9d
gnu: r-ttr: Update to 0.23-4.
* gnu/packages/cran.scm (r-ttr): Update to 0.23-4.
2018-10-30 21:46:17 +01:00
Ricardo Wurmus dda4ce560f
gnu: r-tinytex: Update to 0.9.
* gnu/packages/cran.scm (r-tinytex): Update to 0.9.
2018-10-30 21:46:10 +01:00
Ricardo Wurmus a8de3090d8
gnu: r-xfun: Update to 0.4.
* gnu/packages/cran.scm (r-xfun): Update to 0.4.
2018-10-30 21:46:00 +01:00
Ricardo Wurmus 8c456dff26
gnu: r-fitdistrplus: Update to 1.0-11.
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.0-11.
[propagated-inputs]: Add r-npsurv.
2018-10-30 21:45:51 +01:00
Ricardo Wurmus bba80fadbe
gnu: r-magic: Update to 1.5-9.
* gnu/packages/cran.scm (r-magic): Update to 1.5-9.
2018-10-30 21:45:42 +01:00
Ricardo Wurmus 5621b8403b
gnu: r-sm: Update to 2.2-5.6.
* gnu/packages/cran.scm (r-sm): Update to 2.2-5.6.
2018-10-30 21:45:32 +01:00
Ricardo Wurmus 870faab4b7
gnu: r-xts: Update to 0.11-1.
* gnu/packages/cran.scm (r-xts): Update to 0.11-1.
2018-10-30 21:45:16 +01:00
Ricardo Wurmus 16a39c2d56
gnu: r-ggridges: Update to 0.5.1.
* gnu/packages/cran.scm (r-ggridges): Update to 0.5.1.
2018-10-30 21:45:07 +01:00
Ricardo Wurmus 9e82d6080e
gnu: r-cli: Update to 1.0.1.
* gnu/packages/cran.scm (r-cli): Update to 1.0.1.
2018-10-30 21:44:59 +01:00
Ricardo Wurmus 2b8126a4ec
gnu: r-reshape: Update to 0.8.8.
* gnu/packages/cran.scm (r-reshape): Update to 0.8.8.
2018-10-30 21:44:48 +01:00
Ricardo Wurmus ecdfca05c8
gnu: r-ffbase: Update to 0.12.5.
* gnu/packages/cran.scm (r-ffbase): Update to 0.12.5.
2018-10-30 21:44:38 +01:00
Ricardo Wurmus 674c818560
gnu: r-rcpp: Update to 0.12.19.
* gnu/packages/cran.scm (r-rcpp): Update to 0.12.19.
2018-10-30 21:44:28 +01:00
Ricardo Wurmus 0ab28e5450
gnu: r-pkgload: Update to 1.0.1.
* gnu/packages/cran.scm (r-pkgload): Update to 1.0.1.
2018-10-30 21:43:38 +01:00
Ricardo Wurmus 2657e666cb
gnu: r-pkgbuild: Update to 1.0.2.
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.2.
[propagated-inputs]: Add r-cli and r-prettyunits.
2018-10-30 21:43:28 +01:00
Ricardo Wurmus 7e127ab128
gnu: r-ps: Update to 1.2.0.
* gnu/packages/cran.scm (r-ps): Update to 1.2.0.
2018-10-30 21:43:19 +01:00
Ricardo Wurmus b62e104b84
gnu: r-ape: Update to 5.2.
* gnu/packages/cran.scm (r-ape): Update to 5.2.
2018-10-30 21:43:10 +01:00
Ricardo Wurmus 1c9906c2dd
gnu: r-reprex: Update to 0.2.1.
* gnu/packages/cran.scm (r-reprex): Update to 0.2.1.
[propagated-inputs]: Add r-fs, remove r-knitr.
2018-10-30 21:42:59 +01:00
Ricardo Wurmus 6b451c0801
gnu: r-gprofiler: Update to 0.6.7.
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.7.
2018-10-30 21:42:48 +01:00
Ricardo Wurmus 4fc6609a0c
gnu: r-keggrest: Update to 1.20.2.
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.20.2.
2018-10-30 21:42:39 +01:00
Ricardo Wurmus 67cfb83ff1
gnu: r-msnbase: Update to 2.6.4.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.6.4.
2018-10-30 21:42:31 +01:00
Ricardo Wurmus 807d961cc9
gnu: r-methylkit: Update to 1.6.3.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.6.3.
2018-10-30 21:42:20 +01:00
Ricardo Wurmus ac0166450d
gnu: r-wgcna: Update to 1.66.
* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.66.
2018-10-30 21:42:09 +01:00
Ricardo Wurmus 1182460750
gnu: r-go-db: Update to 3.6.0.
* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.6.0.
2018-10-30 21:42:00 +01:00
Ricardo Wurmus 466bf3af89
gnu: r-genomicfeatures: Update to 1.32.3.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.32.3.
2018-10-30 21:41:12 +01:00
Ricardo Wurmus dd0216e0e7
gnu: r-delayedarray: Update to 0.6.6.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.6.6.
2018-10-30 21:40:57 +01:00
Ricardo Wurmus 72408357fa
gnu: r-genomicranges: Update to 1.32.7.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.32.7.
2018-10-30 21:40:48 +01:00
Ricardo Wurmus 9dad1957ab
gnu: r-limma: Update to 3.36.5.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.36.5.
2018-10-30 21:40:40 +01:00
Ricardo Wurmus 57cf6a14f0
gnu: r-edger: Update to 3.22.5.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.22.5.
2018-10-30 21:40:32 +01:00
Ricardo Wurmus eb890466fa
gnu: r-genomeinfodbdata: Update to 1.1.0.
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Update to 1.1.0.
2018-10-30 21:40:22 +01:00
Ricardo Wurmus e563acb96b
gnu: r-iranges: Update to 2.14.12.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.14.12.
2018-10-30 21:40:12 +01:00
Ricardo Wurmus 192c19f484
gnu: r-vegan: Update to 2.5-3.
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.5-3.
2018-10-30 21:40:00 +01:00
Ricardo Wurmus 696e1ce263
gnu: r-graph: Update to 1.58.2.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.58.2.
2018-10-30 21:39:50 +01:00
Ricardo Wurmus 6ab5670aba
gnu: r-nloptr: Update to 1.2.1.
* gnu/packages/statistics.scm (r-nloptr): Update to 1.2.1.
[native-inputs]: Add r-knitr and gfortran.
2018-10-30 21:39:39 +01:00
Ricardo Wurmus c5bd8a7c23
gnu: r-devtools: Update to 2.0.1.
* gnu/packages/statistics.scm (r-devtools): Update to 2.0.1.
[propagated-inputs]: Remove r-whisker; add r-callr, r-cli, r-pkgbuild,
r-pkgload, r-rcmdcheck, r-remotes, r-sessioninfo, and r-usethis.
2018-10-30 21:39:29 +01:00
Ricardo Wurmus aa99568639
gnu: r-evaluate: Update to 0.12.
* gnu/packages/statistics.scm (r-evaluate): Update to 0.12.
[propagated-inputs]: Remove r-stringr.
2018-10-30 21:39:16 +01:00
Ricardo Wurmus 60aac7ec16
gnu: r-robustbase: Update to 0.93-3.
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-3.
2018-10-30 21:39:06 +01:00
Ricardo Wurmus 16508df1d3
gnu: r-cardata: Update to 3.0-2.
* gnu/packages/statistics.scm (r-cardata): Update to 3.0-2.
2018-10-30 21:38:55 +01:00
Ricardo Wurmus 98a4b9d040
gnu: r-zoo: Update to 1.8-4.
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-4.
2018-10-30 21:38:35 +01:00
Ricardo Wurmus 834f203c07
gnu: r-tidyselect: Update to 0.2.5.
* gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.5.
2018-10-30 21:38:25 +01:00
Ricardo Wurmus 33fb92aacd
gnu: r-doparallel: Update to 1.0.14.
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.14.
2018-10-30 21:38:16 +01:00
Ricardo Wurmus 3ea7aefd59
gnu: r-snow: Update to 0.4-3.
* gnu/packages/statistics.scm (r-snow): Update to 0.4-3.
2018-10-30 21:38:03 +01:00
Ricardo Wurmus 62a7492c90
gnu: r-plotrix: Update to 3.7-4.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-4.
2018-10-30 21:37:53 +01:00
Ricardo Wurmus 943cab4f72
gnu: r-rstudioapi: Update to 0.8.
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.8.
2018-10-30 21:37:35 +01:00
Ricardo Wurmus 960425c9e3
gnu: r-commonmark: Update to 1.6.
* gnu/packages/statistics.scm (r-commonmark): Update to 1.6.
2018-10-30 21:37:25 +01:00
Ricardo Wurmus e028eaa992
gnu: r-coda: Update to 0.19-2.
* gnu/packages/statistics.scm (r-coda): Update to 0.19-2.
2018-10-30 21:37:14 +01:00
Ricardo Wurmus 672ba7494b
gnu: r-data-table: Update to 1.11.8.
* gnu/packages/statistics.scm (r-data-table): Update to 1.11.8.
2018-10-30 21:37:03 +01:00
Ricardo Wurmus f75ee8c691
gnu: r-dplyr: Update to 0.7.7.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.7.
2018-10-30 21:36:54 +01:00
Ricardo Wurmus 17f6198f06
gnu: r-rlang: Update to 0.3.0.1.
* gnu/packages/statistics.scm (r-rlang): Update to 0.3.0.1.
2018-10-30 21:36:44 +01:00
Ricardo Wurmus 822863f8f9
gnu: r-r6: Update to 2.3.0.
* gnu/packages/statistics.scm (r-r6): Update to 2.3.0.
2018-10-30 21:36:35 +01:00
Ricardo Wurmus 3a83251c4f
gnu: r-testthat: Update to 2.0.1.
* gnu/packages/statistics.scm (r-testthat): Update to 2.0.1.
2018-10-30 21:36:24 +01:00
Ricardo Wurmus cb448dd251
gnu: r-microbenchmark: Update to 1.4-6.
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-6.
2018-10-30 21:36:13 +01:00
Ricardo Wurmus 9f7438355d
gnu: r-mine: Update to 0.6.
* gnu/packages/statistics.scm (r-mine): Update to 0.6.
2018-10-30 21:36:04 +01:00
Ricardo Wurmus 9413424d2d
gnu: r-ggplot2: Update to 3.1.0.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.1.0.
2018-10-30 21:35:52 +01:00
Ricardo Wurmus 058394967c
gnu: r-digest: Update to 0.6.18.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.18.
2018-10-30 21:35:40 +01:00
Ricardo Wurmus b85f805090
gnu: r-mgcv: Update to 1.8-25.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-25.
2018-10-30 21:35:26 +01:00
Ricardo Wurmus 2f5e8f6094
gnu: r-mass: Update to 7.3-51.
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.
2018-10-30 21:35:12 +01:00
Ricardo Wurmus 2ea75a8369
gnu: Add r-npsurv.
* gnu/packages/cran.scm (r-npsurv): New variable.
2018-10-30 21:35:03 +01:00
Ricardo Wurmus 7c7ee6cf4c
gnu: Add r-lsei.
* gnu/packages/cran.scm (r-lsei): New variable.
2018-10-30 21:34:55 +01:00
Ricardo Wurmus 74cc74e434
gnu: Add r-summarytools.
* gnu/packages/cran.scm (r-summarytools): New variable.
2018-10-30 21:34:45 +01:00
Ricardo Wurmus 319a80ce96
gnu: Add r-pander.
* gnu/packages/cran.scm (r-pander): New variable.
2018-10-30 21:34:35 +01:00
Ricardo Wurmus 9b02d1a11e
gnu: Add r-rapportools.
* gnu/packages/cran.scm (r-rapportools): New variable.
2018-10-30 21:34:25 +01:00
Ricardo Wurmus 5df4e27fec
gnu: Add r-rcmdcheck.
* gnu/packages/cran.scm (r-rcmdcheck): New variable.
2018-10-30 21:34:15 +01:00
Ricardo Wurmus 7d8f34707a
gnu: Add r-xopen.
* gnu/packages/cran.scm (r-xopen): New variable.
2018-10-30 21:34:05 +01:00
Ricardo Wurmus cbc8e6dd4a
gnu: Add r-remotes.
* gnu/packages/cran.scm (r-remotes): New variable.
2018-10-30 21:33:56 +01:00
Ricardo Wurmus 993426244e
gnu: Add r-sessioninfo.
* gnu/packages/cran.scm (r-sessioninfo): New variable.
2018-10-30 21:33:47 +01:00
Ricardo Wurmus efefd3ec42
gnu: Add r-usethis.
* gnu/packages/cran.scm (r-usethis): New variable.
2018-10-30 21:33:37 +01:00
Ricardo Wurmus 153e5b2ddc
gnu: Add r-clisymbols.
* gnu/packages/cran.scm (r-clisymbols): New variable.
2018-10-30 21:33:25 +01:00
Ricardo Wurmus d6871153c8
gnu: Add r-fs.
* gnu/packages/cran.scm (r-fs): New variable.
2018-10-30 21:33:13 +01:00
Ricardo Wurmus 21405e81e7
gnu: Add r-gh.
* gnu/packages/cran.scm (r-gh): New variable.
2018-10-30 21:33:00 +01:00
Ricardo Wurmus 03f8011220
gnu: Add r-ini.
* gnu/packages/cran.scm (r-ini): New variable.
2018-10-30 21:32:45 +01:00
Danny Milosavljevic 4df3e06210
gnu: rust: Document upstream's assessment.
* gnu/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch: Add URL.
2018-10-30 20:42:04 +01:00
Danny Milosavljevic 52bc7df1a1
gnu: rust: Remove binary bootstrapper.
* gnu/packages/rust.scm (rust-bootstrap): Delete variable.
2018-10-30 20:42:00 +01:00
Danny Milosavljevic 44d530ef09
gnu: rust@1.23.0: Bootstrap from rust@1.22.0.
* gnu/packages/rust.scm (rust-1.23): Bootstrap from rust@1.22.0.
2018-10-30 20:41:55 +01:00
Danny Milosavljevic a75b8c08c0
gnu: rust@1.23.0: Inherit from rust@1.22.0.
* gnu/packages/rust.scm (rust-1.23)[inherit]: Inherit from rust-1.22.
[arguments]: Inherit from rust-1.22.  Delete "remove-ar" phase.
2018-10-30 20:41:50 +01:00
Danny Milosavljevic 7bf169f75c
gnu: rust: Hide "ar" entry from rust@1.21.0.
* gnu/packages/rust.scm (rust-1.21)[arguments]<#:phases>[remove-ar]: New
phase.
2018-10-30 20:41:45 +01:00
Danny Milosavljevic 46cb1c97cb
gnu: rust: Accept more detailed gdb lines for simple enums.
* gnu/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch: Modify.
* gnu/packages/rust.scm (rust-1.25)[arguments]<#:phases>[disable-nil-enum-test]:
Delete phase.
2018-10-30 20:20:55 +01:00
Efraim Flashner a6f2afeee1
gnu: zathura-pdf-mupdf: Simplify arguments.
* gnu/packages/pdf.scm (zathura-pdf-mupdf)[arguments]: Remove custom
'patch-plugin-directory phase, replacd with configure-flag.
2018-10-30 11:15:40 +02:00
Efraim Flashner 24fc8f055d
gnu: zathura-pdf-mupdf: Update to 0.3.4.
* gnu/packages/pdf.scm (zathura-pdf-mupdf): Update to 0.3.4.
[source]: Remove patch.
* gnu/packages/patches/zathura-pdf-mupdf-link-to-jpeg-libraries.patch:
Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-30 11:15:39 +02:00
Efraim Flashner e726f0939e
gnu: mupdf: Update license list.
* gnu/packages/pdf.scm (mupdf)[license]: Update the license list.
2018-10-30 11:15:36 +02:00
Efraim Flashner b1435fe735
gnu: mupdf: Update to 1.14.
* gnu/packages/pdf.scm (mupdf): Update to 1.14.
[source]: Don't remove all the bundled libraries.
[arguments]: Add 'configure-flags to use system libraries.
2018-10-30 11:15:09 +02:00
Efraim Flashner f8ddf719f3
gnu: mujs: Install shared library.
* gnu/packages/javascript.scm (mujs)[arguments]: Add custom phase to
install libmujs.so.
2018-10-30 11:03:48 +02:00
Efraim Flashner 1371e2250a
gnu: mujs: Update to 1.0.5.
* gnu/packages/javascript.scm (mujs): Update to 1.0.5.
2018-10-30 11:03:06 +02:00
Leo Famulari a2717e6986
gnu: calcurse: Use HTTPS URLs.
Reported by Marco van Hulten <marco@hulten.org>.

* gnu/packages/calcurse.scm (calcurse)[source, home-page]: Use HTTPS URLs.
2018-10-29 20:45:57 -04:00
Leo Famulari b4c93a78c8
gnu: xorg-server: Update to 1.20.3 [fixes CVE-2018-14665].
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.3.
2018-10-28 18:22:46 -04:00
Mathieu Othacehe 81f12f33b7
gnu: linux-libre: Enable BOCHS DRM support.
* gnu/packages/aux-files/linux-libre/4.19-x86_64.conf: Build DRM BOCHS support
as a module.  It adds DRM support for BOCHS dispi vga interface used by
qemu (-vga std option). It will also be useful for QEMU 3.0 to enable the new
"bochs-display" display device.
* gnu/packages/aux-files/linux-libre/4.19-i686.conf: Ditto.
2018-10-28 20:42:50 +09:00
Efraim Flashner 852a5692bb
gnu: qt@4: Use invoke.
* gnu/packages/qt.scm (qt@4)[arguments]: Use invoke.
2018-10-28 09:52:46 +02:00
Efraim Flashner 1f71daf499
gnu: qt@4: Update build config.
* gnu/packages/qt.scm (qt@4)[arguments]: Substitute hardcoded '/bin/ls'
invocation. Add configure-flags to not build the examples or demos.
Don't use the precompiled headers.
2018-10-28 09:52:38 +02:00
Efraim Flashner 3ea61f9642
gnu: qt: Use invoke.
* gnu/packages/qt.scm (qt)[arguments]: Use invoke.
2018-10-28 09:52:16 +02:00
Efraim Flashner 124351efad
gnu: qt: Add vulkan support.
* gnu/packages/qt.scm (qt, qtbase)[native-inputs]: Add vulkan-headers.
(qt@4)[native-inputs]: Don't add vulkan-headers.
(qttools)[native-inputs]: Add vulkan-headers.
2018-10-28 09:51:56 +02:00
Efraim Flashner d28af1991a
gnu: qt: Use system sqlite.
* gnu/packages/databases.scm (sqlite-with-column-metadata): New
variable.
* gnu/packages/qt.scm (qt, qtbase)[source]: Remove bundled sqlite.
[inputs]: Add sqlite-with-column-metadata.
[arguments]: Add configure-flag to use system sqlite.
2018-10-28 09:51:25 +02:00
Efraim Flashner 7930cfc989
gnu: qt: Update to 5.11.2.
* gnu/packages/qt.scm (qt, qtbase, qtsvg, qtimageformats, qtx11extras,
qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors,
qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel,
qtwebglplugin, qtwebview, qtlocation, qttools, qtscript,
qtquickcontrols, qtquickcontrols2, qtgraphicaleffects, qtgamepad,
qtscxml, qtpurchasing, qtcanvas3d, qtcharts, qtdatavis3d, qtnetworkauth,
qtremoteobjects, qtspeech): Update to 5.11.2.
2018-10-28 09:51:05 +02:00
Tobias Geerinckx-Rice 2b9b4b1fe3
gnu: hashcat-utils: Update to 1.9.
And trim lines to 80 characters.

* gnu/packages/password-utils.scm (hashcat-utils): Update to 1.9.
[source]: Parametrise.
2018-10-28 02:34:07 +01:00
Tobias Geerinckx-Rice 2792d8a865
gnu: fzy: Update to 1.0.
* gnu/packages/shellutils.scm (fzy): Update to 1.0.
2018-10-28 02:34:07 +01:00
Tobias Geerinckx-Rice 31b619566d
gnu: fzy: Don't use unstable tarball.
* gnu/packages/shellutils.scm (fzy)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2018-10-28 02:34:07 +01:00
Tobias Geerinckx-Rice 6135735b52
gnu: perl-www-mechanize: Update to 1.89.
* gnu/packages/web.scm (perl-www-mechanize): Update to 1.89.
2018-10-28 02:34:06 +01:00
Tobias Geerinckx-Rice fc82538c15
gnu: perl-xml-xpath: Update to 1.44.
* gnu/packages/xml.scm (perl-xml-xpath): Update to 1.44.
2018-10-28 02:34:06 +01:00
Tobias Geerinckx-Rice a8b12397a1
gnu: flatbuffers: Fix typo in description.
* gnu/packages/serialization.scm (flatbuffers)[description]: Hyphenate.
2018-10-28 02:34:06 +01:00
Kei Kebreau f3dd10dfe7
gnu: libmspack: Update to 0.8 [fixes CVE-2018-{18584,18585,18586}].
* gnu/packages/compression.scm (libmspack): Update to 0.8.
2018-10-27 20:04:20 -04:00
Ludovic Courtès 1f889cac4e
gnu: mailutils: Add dependency on GSASL.
* gnu/packages/mail.scm (mailutils)[inputs]: Add GSASL.
2018-10-28 01:10:55 +02:00
Ludovic Courtès ac3b4b124f
gnu: mailutils: Install modules to …/guile/site/2.2.
* gnu/packages/mail.scm (mailutils)[arguments]: Pass
"--with-guile-site-dir".
2018-10-28 01:09:54 +02:00
Efraim Flashner 20a3df0fd3
gnu: mailutils: Update to 3.5.
* gnu/packages/mail.scm (mailutils): Update to 3.5.
[source]: Remove patch, remove snippet.
[native-inputs]: Remove flex, bison.
[inputs]: Remove guile-2.0, add guile-2.2.
* gnu/packages/patches/mailutils-uninitialized-memory.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-28 00:02:08 +03:00
Ricardo Wurmus 763d44920d
gnu: guile-sdl2: Update to 0.3.1.
* gnu/packages/sdl.scm (guile-sdl2): Update to 0.3.1.
2018-10-27 20:08:50 +02:00
Mădălin Ionel Patrașcu b509df82de
gnu: Add r-abundant.
* gnu/packages/cran.scm (r-abundant): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-10-27 18:54:39 +02:00
Mădălin Ionel Patrașcu b5a310056c
gnu: Add r-quic.
* gnu/packages/cran.scm (r-quic): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-10-27 18:54:39 +02:00
Ricardo Wurmus 67e0fb8b49
gnu: Add xrandr-invert-colors.
* gnu/packages/xdisorg.scm (xrandr-invert-colors): New variable.
2018-10-27 18:54:39 +02:00
Tomáš Čech e9a041577a
gnu: Add telegram-purple.
* gnu/packages/messaging.scm (telegram-purple): New variable.
* gnu/packages/patches/telegram-purple-adjust-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-10-27 16:39:29 +02:00
Ludovic Courtès 244a0d5aad
gnu: libzmf: Disable '-Werror'.
Fixes builds on i686-linux.

* gnu/packages/libreoffice.scm (libzmf)[arguments]: New field.
2018-10-27 16:39:29 +02:00
Pierre Neidhardt 1316413558
gnu: git: Add "subtree" output.
* gnu/packages/version-control.scm (git)[outputs]: Add "subtree".
2018-10-27 16:29:47 +02:00
Meiyo Peng cbea1e8dd2
gnu: lxqt-build-tools: Define LXQT_DATA_DIR and LXQT_ETC_XDG_DIR.
* gnu/packages/lxqt.scm (lxqt-build-tools)[arguments]: Define LXQT_DATA_DIR
and LXQT_ETC_XDG_DIR in the configure flags.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-27 19:50:41 +08:00
Meiyo Peng 6f00fb75ca
gnu: lxqt: Correct licenses for several packages.
* gnu/packages/lxqt.scm (pcmanfm-qt, lximage-qt, pavucontrol-qt, qtermwidget)
(qterminal, screengrab, lxqt): Correct license to GPL2+.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-27 18:17:08 +08:00
宋文武 a46c00a3d8
gnu: lxqt: Propagate qterminal actually.
* gnu/packages/lxqt.scm (lxqt)[propagated-inputs]: Fix typo of 'qterminal'.
2018-10-27 11:34:57 +08:00
Tobias Geerinckx-Rice 3825b44448
gnu: xmlsec-nss: Fix tests (and hence build).
* gnu/packages/xml.scm (xmlsec-nss)[native-inputs]: Add nss:bin to
provide the certutil command.
2018-10-27 04:49:19 +02:00
Tobias Geerinckx-Rice 4795e5e177
gnu: units: Update to 2.18.
* gnu/packages/maths.scm (units): Update to 2.18.
2018-10-27 04:47:56 +02:00
Tobias Geerinckx-Rice 6d9a690927
gnu: parallel: Update to 20181022.
* gnu/packages/parallel.scm (parallel): Update to 20181022.
2018-10-27 04:47:19 +02:00
Tobias Geerinckx-Rice 574d877e40
gnu: gvpe: Update to 3.1.
* gnu/packages/vpn.scm (gvpe): Update to 3.1.
[source]: Remove obsolete snippet.
[native-inputs]: Add pkg-config.
2018-10-27 04:47:18 +02:00
Tobias Geerinckx-Rice b2d286545d
gnu: gama: Update to 2.01.
* gnu/packages/gps.scm (gama): Update to 2.01.
2018-10-27 04:47:18 +02:00
Tobias Geerinckx-Rice b106b78cf8
gnu: perl-x11-xcb: Update to 0.18.
* gnu/packages/xorg.scm (perl-x11-xcb): Update to 0.18.
2018-10-27 04:47:18 +02:00
Tobias Geerinckx-Rice 429a332b1c
gnu: flatbuffers: Update to 1.10.0.
* gnu/packages/serialization.scm (flatbuffers): Update to 1.10.0.
2018-10-27 04:47:18 +02:00
Eric Bavier 829785c11d
gnu: Add tnef.
* gnu/packages/mail.scm (tnef): New variable.
2018-10-26 21:16:42 -05:00
HiPhish 01a0a0c445
gnu: Add lua5.1-lpeg and lua5.1-lmpack.
* gnu/packages/lua.scm (lua5.1-lpeg): New variable.
* gnu/packages/serialization.scm (lua5.1-libmpack): New variable.

The packages lua-lpeg and lua-libmpack had no Lua 5.1 variants. These
packages will be needed to build Neovim properly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-26 21:17:00 +02:00
Pierre-Antoine Rouby 3239dcd38d
gnu: Add jp2a.
* gnu/packages/image.scm: New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-26 21:16:13 +02:00
Ludovic Courtès fdf0248428
gnu: sbcl-lift: Fix 'license' field.
The invalid 'license' field was preventing evaluations from completing.

* gnu/packages/lisp.scm (sbcl-lift)[license]: Change to LICENSE:EXPAT.
2018-10-26 21:07:03 +02:00
Nikolai Merinov 2e2b8635b9
gnu: rust: Update to 1.28.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.27): ... this.
(rust): New variable.
2018-10-26 18:11:15 +02:00
Nikolai Merinov e027a494fd
gnu: rust: Work around rust 1.25...1.27 reproducibility issues.
* gnu/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add new patch file.
* gnu/packages/rust.scm (rust-1.19): Use system libssh2 library.
during cargo build.  Note: libgit2 still bundled, because cargo
tests assume specific libgit2 minor release.
(rust-1.23): Inherit native-inputs from previous package.
(rust-1.25): Switch back to llvm 3.9.1 as workaround for
https://github.com/rust-lang/rust/issues/50556 issue.
(rust-1.27): Apply changes from
https://github.com/rust-lang-nursery/mdBook/pull/692 to make
generation of "searchindex.js" files reproducible. Disable cargo
test that required llvm 6.
2018-10-26 18:11:15 +02:00
Meiyo Peng 1fdcee026b
gnu: Add lxqt.
* gnu/packages/lxqt.scm (lxqt): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 22:07:05 +08:00
Meiyo Peng a457e3f6ef
gnu: libqtxdg: Simplify configure flags.
* gnu/packages/lxqt.scm (libqtxdg)[arugemnts]: Use relative path for
'QTXDGX_ICONENGINEPLUGIN_INSTALL_PATH'.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 22:07:05 +08:00
Meiyo Peng 097166dfb0
gnu: lxqt.scm: Remove ${CMAKE_INSTALL_PREFIX} from DESTINATION path.
* gnu/packages/lxqt.scm: Remove ${CMAKE_INSTALL_PREFIX} from DESTINATION path.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 22:07:04 +08:00
Meiyo Peng 31fd62c8ca
gnu: Add obconf-qt.
* gnu/packages/lxqt.scm (obconf-qt): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 22:06:57 +08:00
Meiyo Peng 32b74b7028
gnu: Add compton-conf.
* gnu/packages/lxqt.scm (compton-conf): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 21:41:38 +08:00
Meiyo Peng 9886134cc6
gnu: Add qps.
* gnu/packages/lxqt.scm (qps): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 21:36:43 +08:00
Meiyo Peng 7e9e775f44
gnu: Add qterminal.
* gnu/packages/lxqt.scm (qterminal): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 21:31:15 +08:00
Meiyo Peng 4b88ab554c
gnu: Add screengrab.
* gnu/packages/lxqt.scm (screengrab): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 21:20:21 +08:00
Meiyo Peng 604bdae7e5
gnu: Add lximage-qt.
* gnu/packages/lxqt.scm (lximage-qt): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 21:12:17 +08:00
Meiyo Peng 26127ebb97
gnu: lxqt.scm: Sort packages into base, core, etc.
* gnu/packages/lxqt.scm: Sort packages into base, core, etc.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 21:05:12 +08:00
Meiyo Peng 0aab234954
gnu: Add qtermwidget.
* gnu/packages/lxqt.scm (qtermwidget): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-26 18:54:16 +08:00
Tobias Geerinckx-Rice 21c51ebd66
gnu: hplip: Update home page.
* gnu/packages/cups.scm (hplip)[home-page]: Follow its permanent
redirection.
2018-10-26 02:30:52 +02:00
Tobias Geerinckx-Rice b17004f9f9
gnu: hplip: Update to 3.18.9.
* gnu/packages/cups.scm (hplip): Update to 3.18.9.
[arguments]: Add the resulting libraries to the build's RUNPATH.
2018-10-26 02:30:52 +02:00
Tobias Geerinckx-Rice 2fba511e0f
gnu: libsigrok: Update to 0.5.1.
* gnu/packages/electronics.scm (libsigrok): Update to 0.5.1.
[arguments]: Adjust to split udev rules and clean up a little.
2018-10-26 02:30:52 +02:00
Tobias Geerinckx-Rice 0e8e29088f
gnu: dnsmasq: Update to 2.80 [security fixes].
* gnu/packages/dns.scm (dnsmasq): Update to 2.80.
2018-10-26 02:30:52 +02:00
Tobias Geerinckx-Rice e81ddedaef
gnu: tinc: Use HTTPS for sources and home page.
* gnu/packages/vpn.scm (tinc)[source, home-page]: Use HTTPS.
2018-10-26 02:30:51 +02:00
Leo Famulari dea0178fb1
gnu: Mercurial: Update to 4.7.2.
* gnu/packages/version-control.scm (mercurial): Update to 4.7.2.
2018-10-25 20:00:27 -04:00
Meiyo Peng 84f6a9907b
gnu: Add pavucontrol-qt.
* gnu/packages/lxqt.scm (pavucontrol-qt): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:38:57 +08:00
Meiyo Peng 8b1d43a755
gnu: Add lxqt-themes.
* gnu/packages/lxqt.scm (lxqt-themes): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:34:55 +08:00
Meiyo Peng 5663b5b073
gnu: Add lxqt-qtplugin.
* gnu/packages/lxqt.scm (lxqt-qtplugin): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:25:54 +08:00
Meiyo Peng 643961bbc6
gnu: Add lxqt-powermanagement.
* gnu/packages/lxqt.scm (lxqt-powermanagement): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:21:26 +08:00
Meiyo Peng ca302c3e8c
gnu: Add lxqt-openssh-askpass.
* gnu/packages/lxqt.scm (lxqt-openssh-askpass): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:17:16 +08:00
Meiyo Peng bf0da63aae
gnu: Add lxqt-policykit.
* gnu/packages/lxqt.scm (lxqt-policykit): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:12:19 +08:00
Meiyo Peng a98000a462
gnu: Add lxqt-notificationd.
* gnu/packages/lxqt.scm (lxqt-notificationd): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:12:19 +08:00
Meiyo Peng f2b48558df
gnu: lxqt.scm: Move qttools from inputs to native-inputs.
* gnu/packages/lxqt.scm: Move qttools from inputs to native-inputs.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 21:12:13 +08:00
Meiyo Peng 35bfe41a01
gnu: Add lxqt-config.
* gnu/packages/lxqt.scm (lxqt-config): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-25 19:16:18 +08:00
Ricardo Wurmus 7b63047c94
gnu: Add r-sjplot.
* gnu/packages/cran.scm (r-sjplot): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 489a6178e6
gnu: Add r-ggeffects.
* gnu/packages/cran.scm (r-ggeffects): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 413944234c
gnu: Add r-glmmtmb.
* gnu/packages/cran.scm (r-glmmtmb): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus aa4bde0b3a
gnu: Add r-sjstats.
* gnu/packages/cran.scm (r-sjstats): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 3b8a3f5548
gnu: Add r-tmb.
* gnu/packages/cran.scm (r-tmb): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 9b3ecb60e2
gnu: Add r-bayesplot.
* gnu/packages/cran.scm (r-bayesplot): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus bd531e83d1
gnu: Add r-coin.
* gnu/packages/cran.scm (r-coin): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 63fcb88a50
gnu: Add r-pwr.
* gnu/packages/cran.scm (r-pwr): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 55a08dceb5
gnu: Add r-emmeans.
* gnu/packages/cran.scm (r-emmeans): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 7753b54366
gnu: Add r-multcomp.
* gnu/packages/cran.scm (r-multcomp): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 6ce07cf99d
gnu: Add r-th-data.
* gnu/packages/cran.scm (r-th-data): New variable.
2018-10-25 05:17:42 +02:00
Ricardo Wurmus 302db58552
gnu: Add r-sandwich.
* gnu/packages/cran.scm (r-sandwich): New variable.
2018-10-25 05:17:42 +02:00