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35390 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice 483be9bda6
gnu: ocaml-ounit: Update to 2.0.8. 
* gnu/packages/ocaml.scm (ocaml-ounit): Update to 2.0.8.
 2018-09-15 05:17:50 +02:00
Tobias Geerinckx-Rice 3319817174
gnu: pybind11: Update to 2.2.4. 
* gnu/packages/python.scm (pybind11): Update to 2.2.4.
 2018-09-15 05:17:50 +02:00
Tobias Geerinckx-Rice 5c34d97187
gnu: pybind11: Don't use unstable tarball. 
* gnu/packages/python.scm (pybind11)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-15 05:17:50 +02:00
Maxim Cournoyer 61853b7447
gnu: libjpeg: Improve description. 
* gnu/packages/image.scm (libjpeg)[description]: Add the list of the programs
it provides.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-09-15 10:49:50 +08:00
Tobias Geerinckx-Rice 25bc6370a4
gnu: snakemake: Update to 5.2.4. 
* gnu/packages/python.scm (snakemake): Update to 5.2.4.
[propagated-inputs]: Add python-gitpython.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice bbe2a94799
gnu: libsigrokdecode: Update to 0.5.2. 
* gnu/packages/electronics.scm (libsigrokdecode): Update to 0.5.2.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice 9f1b186afc
gnu: libetpan: Update to 1.9.1. 
* gnu/packages/mail.scm (libetpan): Update to 1.9.1.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice aae96f8fac
gnu: libetpan: Don't use unstable tarball. 
* gnu/packages/mail.scm (libetpan)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-15 03:38:31 +02:00
Tobias Geerinckx-Rice f9fe94c1f6
gnu: emacs-magit-popup: Don't use unstable tarball. 
* gnu/packages/emacs.scm (emacs-magit-popup)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice e1bf455cee
gnu: emacs-magit-popup: Update to 2.12.4. 
* gnu/packages/emacs.scm (emacs-magit-popup): Update to 2.12.4.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice 49c941b43b
gnu: libmwaw: Update to 0.3.14. 
* gnu/packages/libreoffice.scm (libmwaw): Update to 0.3.14.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice 002d73a01f
gnu: libwps: Update to 0.4.10. 
* gnu/packages/libreoffice.scm (libwps): Update to 0.4.10.
 2018-09-15 03:38:30 +02:00
Tobias Geerinckx-Rice c924fe38dc
gnu: umoci: Update to 0.4.2. 
* gnu/packages/virtualization.scm (umoci): Update to 0.4.2.
 2018-09-15 03:36:36 +02:00
Tobias Geerinckx-Rice 56f3b85bd3
gnu: python-iso8601: Update to 0.1.12. 
* gnu/packages/time.scm (python-iso8601): Update to 0.1.12.
 2018-09-15 03:36:36 +02:00
Tobias Geerinckx-Rice ed017a78be
gnu: coq: Update to 8.8.1. 
* gnu/packages/ocaml.scm (coq): Update to 8.8.1.
 2018-09-15 03:36:36 +02:00
Tobias Geerinckx-Rice 1d7cc6841e
gnu: coq: INVOKE. 
* gnu/packages/ocaml.scm (coq)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-09-15 03:36:35 +02:00
Leo Famulari 9e9e5d5a26
gnu: OpenSSL 1.1: Update to 1.1.1. 
* gnu/packages/tls.scm (openssl-next): Update to 1.1.1.
[arguments]: Patch a `/usr/bin/env` invocation in the 'config' script.
Adjust the documentation output.
* gnu/packages/patches/openssl-1.1.0-c-rehash-in.patch: Rename and ...
* gnu/packages/patches/openssl-1.1-c-rehash-in.patch: ... adjust patch.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2018-09-14 16:51:49 -04:00
Danny Milosavljevic e830c9d0b0
gnu: Rename "banana-pi" to "bananapi". 
* gnu/bootloader/u-boot.scm (u-boot-banana-pi-m2-ultra-bootloader): Rename
to...
(u-boot-bananapi-m2-ultra-bootloader): ...this.
* gnu/packages/bootloaders.scm (u-boot-banana-pi-m2-ultra): Rename to...
(u-boot-bananapi-m2-ultra): ...this.
* gnu/system/install.scm (banana-pi-m2-ultra-installation-os): Rename to...
(bananapi-m2-ultra-installation-os): ...this.
 2018-09-14 21:31:24 +02:00
Ricardo Wurmus 7a20877a18
gnu: python-llvmlite: Remove obsolete patch. 
* gnu/packages/llvm.scm (python-llvmlite)[inputs]: Remove patch that is
obsolete since the upgrade to LLVM 6.0.1.
 2018-09-14 15:12:03 +02:00
Ludovic Courtès 13512e1b8f
git-download: 'git-predicate' returns #f on Git errors. 
Fixes a regression introduced in
aed0a59405 whereby 'git-predicate' would
throw to 'git-error instead of returning #f as the docstring says.

* guix/git-download.scm (git-predicate): Return #f upon 'git-error'.
 2018-09-14 11:23:08 +02:00
Eric Brown daa6036fda
gnu: Add openblas-ilp64. 
* gnu/packages/maths.scm (openblas-ilp64): New variable.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2018-09-14 11:23:07 +02:00
Ricardo Wurmus 1dd153b3aa
gnu: Add python-hic2cool. 
* gnu/packages/bioinformatics.scm (python-hic2cool): New variable.
 2018-09-14 09:15:49 +02:00
Clément Lassieur 6ffffb3c96
hydra: Remove useless 'parameterize'. 
* build-aux/hydra/gnu-system.scm (manifests->packages): Remove 'parameterize'.
 2018-09-14 09:01:07 +02:00
pimi 03c95f0414
gnu: Add r-abps. 
* gnu/packages/cran.scm (r-abps): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-14 07:46:19 +02:00
pimi 016cabf7be
gnu: Add r-abodoutlier. 
* gnu/packages/cran.scm (r-abodoutlier): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-14 07:46:19 +02:00
Danny Milosavljevic 317b139c5d
gnu: rust: Update to 1.27.2. 
* gnu/packages/rust.scm (rust): Update to 1.27.2.
 2018-09-13 22:37:55 +02:00
pimi b6afe7b7f5
gnu: Add r-abnormality. 
* gnu/packages/cran.scm (r-abnormality): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 22:16:01 +02:00
Tobias Geerinckx-Rice f0314f65df
gnu: Add perl-devel-checklib. 
* gnu/packages/perl.scm (perl-devel-checklib): New public variable.
 2018-09-13 19:53:08 +02:00
Tobias Geerinckx-Rice 7ec4f648e5
gnu: sg3_utils: Mark up description. 
* gnu/packages/scsi.scm (sg3_utils)[description]: Use @dfn{}.
Wrap commands in @command{} rather than @code{}, and @itemize them.
 2018-09-13 19:53:08 +02:00
Tobias Geerinckx-Rice 581b6f5e96
gnu: sudo: Update to 1.8.25p1. 
* gnu/packages/admin.scm (sudo): Update to 1.8.25p1.
 2018-09-13 19:53:07 +02:00
Tobias Geerinckx-Rice 0b0b43ed7a
gnu: youtube-viewer: Update to 3.4.1. 
* gnu/packages/video.scm (youtube-viewer): Update to 3.4.1.
 2018-09-13 19:53:07 +02:00
Tobias Geerinckx-Rice 6be445785a
gnu: youtube-viewer: Don't use unstable tarball. 
* gnu/packages/video.scm (youtube-viewer)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2018-09-13 19:53:07 +02:00
Leo Famulari ecd1301651
gnu: libinput: Update to 1.12.0. 
* gnu/packages/freedesktop.scm (libinput): Update to 1.12.0.
 2018-09-13 13:33:10 -04:00
Leo Famulari d763940711
Merge branch 'master' into core-updates 2018-09-13 13:32:39 -04:00
Leo Famulari 7d1cc61293
Revert "gnu: libinput: Update to 1.12.0." 
Libinput-minimal has a lot of dependent packages, and this isn't reported by
`guix refresh --list-dependent`. We'll save this commit for another time.

This reverts commit 38dc3d6f17.
 2018-09-13 13:28:10 -04:00
pimi ebb3cdb1ea
gnu: Add r-abjutils. 
* gnu/packages/cran.scm (r-abjutils): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 19:18:47 +02:00
pimi 1efcd0f1ea
gnu: Add r-abhgenotyper. 
* gnu/packages/cran.scm (r-abhgenotyper): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 19:13:43 +02:00
Manuel Graf ae72b8f55b
gnu: Add ClusterShell. 
* gnu/packages/ssh.scm (clustershell): New variable.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2018-09-13 19:12:25 +02:00
Leo Famulari 38dc3d6f17
gnu: libinput: Update to 1.12.0. 
* gnu/packages/freedesktop.scm (libinput): Update to 1.12.0.
 2018-09-13 13:08:24 -04:00
pimi ef26400b66
gnu: Add r-abf2. 
gnu/packages/cran.scm (r-abf2): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 19:05:35 +02:00
Efraim Flashner f21967a44b
gnu: retroarch: Fix building on armhf-linux. 
* gnu/packages/emulators.scm (retroarch)[arguments]: Add custom flags
when building for armhf-linux.
 2018-09-13 18:40:32 +03:00
Efraim Flashner fade67ab75
gnu: retroarch: Use shared zlib. 
* gnu/packages/emulators.scm (retroarch)[arguments]: In custom
'configure phase, use our zlib instead of vendor's zlib.
 2018-09-13 18:40:30 +03:00
Danny Milosavljevic 060366f6b3
gnu: rust@1.23.0: Inherit outputs. 
* gnu/packages/rust.scm (rust-1.23)[outputs]: Inherit.
 2018-09-13 17:19:04 +02:00
Danny Milosavljevic b78fe27b31
gnu: rust@1.25.0: Disable pedantic test. 
* gnu/packages/rust.scm (rust-1.25)[arguments]<#:phases>
[disable-nil-enum-test]: New phase.
 2018-09-13 17:17:15 +02:00
Danny Milosavljevic 6fe73b487b
gnu: rust: Accept more detailed gdb responses. 
* gnu/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust-1.25): Use it.
(rust-1.26): Use it.
(rust): Use it.
 2018-09-13 17:17:15 +02:00
pimi 3cadd3ce93
gnu: Add r-abe. 
gnu/packages/cran.scm (r-abe): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 15:21:40 +02:00
pimi d1ca3d7297
gnu: Add r-svdialogs. 
gnu/packages/cran.scm (r-svdialogs): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2018-09-13 15:07:45 +02:00
宋文武 26700caed9
gnu: racket: Fix incompatibility with libedit. 
The former patching made racket detecting libedit as the old 2.11 version,
which leads to failure:
<https://lists.gnu.org/archive/html/help-guix/2018-09/msg00027.html>.

* gnu/packages/scheme.scm (racket)[arguments]: Patch the 'ffi-lib' call of
libedit using 'PLT_READLINE_LIB'.
 2018-09-13 20:20:41 +08:00
Ludovic Courtès ac4d2ec81a
build-self: Emit a useful message upon error. 
* build-aux/build-self.scm (build): Raise a '&message' condition instead
of calling 'error'.
 2018-09-13 10:29:59 +02:00
Ludovic Courtès 78c9058dde
build-self: Add a dummy (git) module to 'compute-guix-derivation'. 
Fixes a regression introduced in
aed0a59405.

* build-aux/build-self.scm (build-program)[fake-git]: New variable.
Use it as an imported module.
 2018-09-13 10:29:59 +02:00