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35390 Commits

Author SHA1 Message Date
Efraim Flashner b24da117e8
gnu: python-docker-py: Update to 1.10.6. 
* gnu/packages/docker.scm (python-docker-py): Update to 1.10.6.
 2018-07-29 20:00:33 +03:00
Efraim Flashner 5e95181b9d
gnu: Add python-vagrant. 
* gnu/packages/virtualization.scm (python-vagrant): New variable.
 2018-07-29 20:00:33 +03:00
Efraim Flashner b23b9667d9
gnu: virtualization.scm: Use license prefix. 
* gnu/packages/virtualization.scm: Replace all 'license' values with a
'license:' prefix.
 2018-07-29 20:00:33 +03:00
Efraim Flashner 2b1e80d2a9
gnu: Add python-androguard. 
* gnu/packages/android.scm (python-androguard): New variable.
 2018-07-29 20:00:33 +03:00
Efraim Flashner c3f9a6ce67
gnu: Add python-codecov. 
* gnu/packages/check.scm (python-codecov): New variable.
 2018-07-29 20:00:32 +03:00
Efraim Flashner 19110787ab
gnu: Add python-pyperclip. 
* gnu/packages/xdisorg.scm (python-pyperclip): New variable.
 2018-07-29 20:00:32 +03:00
Efraim Flashner 42531fd3a7
gnu: Add python-docker-pycreds. 
* gnu/packages/docker.scm (python-docker-pycreds): New variable.
 2018-07-29 20:00:32 +03:00
Efraim Flashner 2973989060
gnu: quaternion: Build with modular qt. 
* gnu/packages/messaging.scm (quaternion)[inputs]: Remove qt, add
qtbase, qtdeclarative.
 2018-07-29 20:00:32 +03:00
Efraim Flashner 9febf39582
gnu: libqmatrixclient: Build with modular qt. 
* gnu/packages/messaging.scm (libqmatrixclient)[inputs]: Remove qt, add
qtbase.
 2018-07-29 20:00:31 +03:00
Efraim Flashner 6f066db11f
gnu: quaternion: Don't use unstable tarball. 
* gnu/packages/messaging.scm (quaternion)[source]: Download using git
reference and not autogenerated tarball.
 2018-07-29 20:00:31 +03:00
Efraim Flashner c6b60d30ad
gnu: libqmatrixclient: Don't use unstable tarball. 
* gnu/packages/messaging.scm (libqmatrixclient)[source]: Download using
git reference and not autogenerated tarball.
 2018-07-29 20:00:31 +03:00
Efraim Flashner 398a96a286
gnu: monero-gui: Use git-file-name. 
* gnu/packages/finance.scm (monero-gui)[source]: Rename the downloaded
source using 'git-file-name'.
 2018-07-29 20:00:30 +03:00
Efraim Flashner 136ff9a247
gnu: monero: Use git-file-name. 
* gnu/packages/finance.scm (monero)[source]: Rename the downloaded
source using 'git-file-name'.
 2018-07-29 20:00:30 +03:00
Efraim Flashner 077d66ed42
gnu: mcrl2: Build with modular qt. 
* gnu/packages/maths.scm (mcrl2)[inputs]: Replace qt with qtbase.
 2018-07-29 20:00:30 +03:00
Christopher Baines 6465497fb9
gnu: Remove duplicated python-pafy. 
It was first added in 02f8f804f0, then again in
2dd12924cf.

* gnu/packages/python.scm (python-pafy): Remove duplicated package definition.
 2018-07-29 17:57:53 +01:00
Christopher Baines 3b4b6667af
gnu: Remove duplicated perl-extutils-depends. 
This was first added in 84e8b19fe1, and then
again in 017b014ce4.

* gnu/packages/perl.scm (perl-extutils-depends): Remove duplicated package
definition.
 2018-07-29 17:57:53 +01:00
Christopher Baines f694b4ba9c
gnu: Remove duplicated ghc-time-locale-compat. 
It was first added in 5e51bcf7b3, then again in
c56a30b3ba.

* gnu/packages/haskell.scm (ghc-time-locale-compat): Remove duplicated package
definition.
 2018-07-29 17:57:52 +01:00
Christopher Baines 89b4882176
gnu: Remove duplicated ghc-th-lift-instances. 
It was first added in a6d1c4e75a, then again in
ff7dd11f0a.

* gnu/packages/haskell.scm (ghc-th-lift-instances): Remove duplicated package
definition.
 2018-07-29 17:57:52 +01:00
Christopher Baines cfa6cc4d9a
gnu: Remove duplicated r-psych package. 
It was first added in cdc129dc53, then again in
db80dd4a1d.

* gnu/packages/cran.scm (r-psych): Remove duplicated package definition.
 2018-07-29 17:57:52 +01:00
Christopher Baines d493d59a7f
gnu: Remove duplicated emacs-load-relative. 
It was first added in fa1a17b786, and then again
in f8a88f223e.

* gnu/packages/emacs.scm (emacs-load-relative): Remove duplicated package
definition.
 2018-07-29 17:57:52 +01:00
Christopher Baines 26b8cd1a5a
gnu: Remove duplicated emacs-csv-mode. 
It was first added in 9faa46ee48, and then again
in 8bc8efc753.

* gnu/packages/emacs.scm (emacs-csv-mode): Remove duplicated package
definition.
 2018-07-29 17:57:52 +01:00
Ludovic Courtès 99b78ba498
linux-initrd: Report only missing modules, not all needed modules. 
Previously the warning would list all the required modules rather than
just those that are missing.

* gnu/system/mapped-devices.scm (check-device-initrd-modules): Compute
'missing' and report it.
 2018-07-29 18:50:28 +02:00
Ludovic Courtès fcd068e984
linux-initrd: Try several file names when looking up modules. 
Fixes <https://bugs.gnu.org/31714>.
Reported by Tonton <tonton@riseup.net>.

* gnu/build/linux-modules.scm (find-module-file): New procedure.
* gnu/system/linux-initrd.scm (flat-linux-module-directory)[build-exp]:
Remove 'lookup' procedure and use 'find-module-file' instead.
* gnu/system/mapped-devices.scm (check-device-initrd-modules): Add
comment.
 2018-07-29 18:50:28 +02:00
Ludovic Courtès d2a1cf45f7
linux-initrd: Improve check of initrd modules. 
Previously we would not strip the ".ko" suffix if present.

* gnu/build/linux-modules.scm (file-name->module-name): Export.
* gnu/system/mapped-devices.scm (check-device-initrd-modules): Use
'file-name->module-name' instead of 'normalize-module-name'.
 2018-07-29 18:50:28 +02:00
Eric Brown 5b68239072
services: openssh: Add forwarding options. 
* gnu/services/ssh.scm (<openssh-configuration>)[allow-agent-forwarding?]
[allow-tcp-forwarding?, gateway-ports?]: New fields.
(openssh-config-file): Handle them.
* doc/guix.texi (Networking Services): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-07-29 18:50:28 +02:00
Ludovic Courtès b90d97ec2e
ssh: Display the size of the store items being sent. 
* guix/ssh.scm (send-files): Compute the size of MISSING and display
it.
 2018-07-29 18:50:28 +02:00
Ben Woodcroft 3f8c82e6d3
gnu: taxtastic: Add missing propagated-inputs. 
* gnu/packages/bioinformatics.scm (taxtastic)[propagated-inputs]: Add
python-psycopg2, python-fastalite, python-pyyaml, python-six, python-jinja2,
python-dendropy.
 2018-07-29 22:53:10 +10:00
Ben Woodcroft 9e0c135c39
gnu: python-dendropy: Update to 4.4.0. 
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy):
Update to 4.4.0.
[source]: Use GitHub URI. Remove patch.
[properties]: Remove field.
(python2-dendropy)[arguments]: Run tests with setup.py.
[native-inputs]: Remove 'python2-nose.
* gnu/packages/patches/python-dendropy-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Delete it.
 2018-07-29 22:53:10 +10:00
Ben Woodcroft 19601e895b
gnu: python2-psycopg2: Update to 2.7.5. 
* gnu/packages/bioinformatics.scm (python2-psycopg2): Update to 2.7.5.
 2018-07-29 22:53:10 +10:00
Ben Woodcroft 5d5a02dd4c
gnu: Add python-fastalite. 
* gnu/packages/bioinformatics.scm (python-fastalite, python2-fastalite):
New variables.
 2018-07-29 21:58:00 +10:00
Christopher Lemmer Webber 10d5315361
gnu: Add chroma. 
* gnu/packages/games.scm (chroma): New variable.
 2018-07-29 09:37:20 +02:00
Mark H Weaver f8e2df9851
gnu: linux-libre: Update to 4.17.11. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.17.11.
(%linux-libre-hash): Update hash.
 2018-07-29 03:32:03 -04:00
Mark H Weaver c85a76cc00
gnu: linux-libre@4.14: Update to 4.14.59. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.59.
(%linux-libre-4.14-hash): Update hash.
 2018-07-29 03:31:10 -04:00
Mark H Weaver 8b30bc82dc
gnu: linux-libre@4.9: Update to 4.9.116. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.116.
 2018-07-29 03:30:32 -04:00
Mark H Weaver 4262a491ce
gnu: linux-libre@4.4: Update to 4.4.145. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.145.
 2018-07-29 03:29:42 -04:00
Gábor Boskovits 6219685922
gnu: clojure: Fix index generation. 
* gnu/packages/java.scm (clojure)[arguments]: Add phase 'fix-manifest-classpath to remove
offending directory entry making indexing fail.
 2018-07-29 08:41:34 +02:00
Marius Bakke d37d975b74
gnu: python-pytest: Update to 3.6.4. 
* gnu/packages/check.scm (python-pytest): Update to 3.6.4.
[native-inputs]: Remove PYTHON-INVOKE.
 2018-07-28 23:39:00 +02:00
Marius Bakke 20b0aaf986
gnu: python-fonttools: Update license. 
This is a follow-up to commit 4696368108.

* gnu/packages/python.scm (python-fonttools)[license]: Change to EXPAT (since 3.21).
 2018-07-28 23:37:52 +02:00
Marius Bakke d0ab3c33b7
gnu: mesa: Update to 18.1.5. 
* gnu/packages/gl.scm (mesa): Update to 18.1.5.
 2018-07-28 21:35:07 +02:00
Marius Bakke 148df6052c
Revert "Revert "gnu: llvm: Update to 6.0.1."" 
This reverts commit bb8221d41c.
 2018-07-28 21:23:11 +02:00
Efraim Flashner a4b7a1cb4a
gnu: python-3.7: Update deleted tests. 
* gnu/packages/python.scm (python-3.7)[source]: Update the list of files
to be deleted in the snippet.
 2018-07-28 21:56:28 +03:00
Marius Bakke 0333582477
gnu: mariadb: Move GCC ICE patch to the usual location. 
* gnu/packages/databases.scm (mariadb)[source](patches): New field.
[arguments]: Don't disable semisync plugin.
[inputs]: Remove 'mariadb-gcc-ice.patch'.
 2018-07-28 18:37:37 +02:00
Marius Bakke 1af575f04d
Merge branch 'master' into staging 2018-07-28 18:34:59 +02:00
Marius Bakke 48d7ac175f
gnu: openlibm: Update to 0.6.0. 
* gnu/packages/maths.scm (openlibm): Update to 0.6.0.
 2018-07-28 18:12:13 +02:00
Marius Bakke 46bda5eb7a
gnu: glm: Update home page. 
* gnu/packages/maths.scm (glm)[home-page]: Use HTTPS.
 2018-07-28 17:56:59 +02:00
Marius Bakke 5ea4b5943d
gnu: glm: Update to 0.9.9.0. 
* gnu/packages/maths.scm (glm): Update to 0.9.9.0.
[source](uri): Change to new download location.
 2018-07-28 17:55:04 +02:00
Marius Bakke 71de61c353
gnu: libjpeg-turbo: Update license. 
* gnu/packages/image.scm (libjpeg-turbo)[license]: Add ZLIB.
 2018-07-28 17:27:16 +02:00
Marius Bakke 6871121be0
gnu: libjpeg-turbo: Update to 2.0.0. 
* gnu/packages/image.scm (libjpeg-turbo): Update to 2.0.0.
[build-system]: Change to CMAKE-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
 2018-07-28 17:27:16 +02:00
Marius Bakke 0981ec1300
gnu: accountsservice: Update to 0.6.50. 
* gnu/packages/freedesktop.scm (accountsservice): Update to 0.6.50.
[arguments]: Add "--enable-elogind" and "--disable-systemd" to #:configure-flags.
[inputs]: Add ELOGIND.
 2018-07-28 17:27:15 +02:00
Marius Bakke 35fa923d8b
gnu: dconf: Update to 0.28.0. 
* gnu/packages/gnome.scm (dconf): Update to 0.28.0.
[build-system]: Switch to MESON-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
[native-inputs]: Add VALA and GLIB:BIN.
 2018-07-28 17:27:15 +02:00