f315f4fcab
gnu: r-genomation: Update to 1.2.2.
...
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.2.2.
2016-03-30 11:59:16 +02:00
571f0b63d5
gnu: r-genomicfeatures: Update to 1.22.13.
...
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to
1.22.13.
2016-03-30 11:59:16 +02:00
ffaf72ad96
gnu: r-rtracklayer: Update to 1.30.4.
...
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.30.4.
2016-03-30 11:59:15 +02:00
ac2d8b0fb8
gnu: r-genomicalignments: Update to 1.6.3.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to
1.6.3.
2016-03-30 11:59:15 +02:00
7eade1c5f9
gnu: r-summarizedexperiment: Update to 1.0.2.
...
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to
1.0.2.
2016-03-30 11:59:15 +02:00
53fd0f5e1d
gnu: r-biostrings: Update to 2.38.4.
...
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.38.4.
2016-03-30 11:59:15 +02:00
5fe3115415
gnu: r-genomicranges: Update to 1.22.4.
...
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.22.4.
2016-03-30 11:59:15 +02:00
9cc22d28d8
gnu: r-genomeinfodb: Update to 1.6.3.
...
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.6.3.
2016-03-30 11:59:15 +02:00
48fa9312ab
gnu: libpaper: Update source url.
...
Reported by shanemikel_ on irc.
* gnu/packages/ghostscript.scm (libpaper)[source]: Update source url to
download from Fedora.
[home-page]: Use https.
2016-03-30 10:49:03 +03:00
61cdad351d
gnu: guix: Ignore the user's 'GUILE_LOAD_COMPILED_PATH'.
...
Reported by <rain1@openmailbox.org>.
* gnu/packages/package-management.scm (guix-0.10.0)[arguments]: Use '=
instead of 'prefix in call to 'wrap-program'.
2016-03-29 22:13:20 +02:00
3a9a4c51e8
gnu: Add libzapojit.
...
* gnu/packages/gnome.scm (libzapojit): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-03-29 22:13:20 +02:00
b7fbf297c8
gnu: khal: Disable failing tests.
...
* gnu/packages/calendar.scm (khal)[arguments]: Disable failing tests in
'disable-tests' phase.
2016-03-29 15:35:00 -04:00
d1ceedf8b1
gnu: gst-plugins-good: Update to 1.8.0.
...
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.8.0.
[home-page]: Use https.
[arguments]: Disable tests that fail non-deterministically.
2016-03-29 21:34:52 +03:00
40dad30c5e
gnu: gst-plugins-ugly: Update to 1.8.0.
...
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.8.0.
[home-page]: Use https.
2016-03-29 21:34:52 +03:00
d2b5dec5b0
gnu: python-gst: Update to 1.8.0.
...
* gnu/packages/gstreamer.scm (python-gst, python2-gst): Update to 1.8.0.
[home-page]: Use https.
2016-03-29 21:34:52 +03:00
70e863e53e
gnu: gst-plugins-base: Update to 1.8.0.
...
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.8.0.
[home-page]: Use https.
2016-03-29 21:34:52 +03:00
ab0a56201d
gnu: gstreamer: Update to 1.8.0.
...
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.8.0.
2016-03-29 21:34:52 +03:00
50ebd439c7
Merge branch 'version-0.10.0'
2016-03-29 16:13:41 +02:00
f98b48dc51
gnu: guix: Update development snapshot.
...
* gnu/packages/package-management.scm (guix-devel): Update to 7611393
2016-03-29 09:35:22 +02:00
67c2fc01a0
gnu: Add uwsgi.
...
* gnu/packages/web.scm (uwsgi): New variable.
2016-03-29 11:50:24 +08:00
7ad1fee52e
gnu: Add cgit.
...
* gnu/packages/version-control.scm (cgit): New variable.
2016-03-29 11:50:24 +08:00
7611393547
gnu: guix: Default to 0.10.0.
...
This updates 58f0aae
2016-03-28 23:54:48 +02:00
58f0aae5cb
gnu: guix: Update to 0.10.0.
...
* gnu/packages/package-management.scm (guix-0.8.3): Rename to...
(guix-0.10.0): ... this. Adjust users.
(guix): Set to GUIX-0.10.0.
2016-03-28 23:38:00 +02:00
e0b90dbf65
gnu: qtractor: Update to 0.7.5.
...
* gnu/packages/music.scm (qtractor): Update to 0.7.5.
2016-03-28 09:52:16 +02:00
36c2c8c826
gnu: beets: Run tests with python-nose.
...
* gnu/packages/music.scm (nose)[native-inputs]: Add python-nose.
[arguments]: Replace 'check' and use python-nose.
2016-03-27 18:24:19 -04:00
d3e3468fb8
gnu: python-pyechonest: Clean up description.
...
* gnu/packages/music.scm (pyechonest)[description]: Remove "open source" from
the description.
2016-03-26 17:25:13 -04:00
e12f047f75
gnu: pspp: Update to 0.10.0.
...
* gnu/packages/maths.scm (pspp): Update to 0.10.0.
[inputs]: Switch gtk+-2 to gtk+, gtksourceview-2 to gtksourceview.
2016-03-26 22:39:29 +03:00
8d50632373
gnu: sdl2-ttf: Update to 2.0.14.
...
* gnu/packages/sdl.scm (sdl2-ttf): Update to 2.0.14 and remove bundled
libraries from source tarball.
2016-03-26 13:35:06 -04:00
64ee72e124
gnu: sdl2-image: Update to 2.0.1.
...
* gnu/packages/sdl.scm (sdl2-image): Update to 2.0.1.
2016-03-26 13:35:06 -04:00
efd75ade17
gnu: sdl2-mixer: Update to 2.0.1.
...
* gnu/packages/sdl.scm (sdl2-mixer): Update to 2.0.1 and remove bundled
libraries in source tarball.
2016-03-26 13:35:06 -04:00
a313e0850c
gnu: sdl-mixer: Add ModPlug support.
...
* gnu/packages/sdl.scm (sdl-mixer)[inputs]: Add libmodplug.
2016-03-26 13:35:06 -04:00
4c0e59d1a8
gnu: sdl2: Update to 2.0.4.
...
* gnu/packages/sdl.scm (sdl2): Update to 2.0.4.
2016-03-26 13:35:06 -04:00
7c776ddcc0
gnu: crossguid: Set explicit file name for source checkout.
...
* gnu/packages/kodi.scm (crossguid)[source]: Set explicit file-name to
satisfy linter.
2016-03-26 09:52:28 -04:00
c7762233fb
Revert "gnu: expat: Replace with 2.1.1 [fixes CVE-2015-1283]."
...
This reverts commit 6458876597
2016-03-25 17:20:57 -04:00
15bdd91cc4
gnu: diffoscope: Update to 51.
...
* gnu/packages/package-management.scm (diffoscope): Update to 51.
2016-03-25 17:17:06 -04:00
54c30ebcb1
gnu: python-atomicwrites: Update to 1.0.0.
...
* gnu/packages/python.scm (python-atomicwrites, python2-atomicwrites):
Update to 1.0.0.
2016-03-25 17:08:47 -04:00
6458876597
gnu: expat: Replace with 2.1.1 [fixes CVE-2015-1283].
...
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat-2.1.1): New variable.
2016-03-25 17:04:28 -04:00
a2da8c173a
gnu: guix: Update development snapshot to dd21308.
...
* gnu/packages/package-management.scm (guix-devel): Update to dd21308
2016-03-25 10:52:25 +01:00
7affb2c1ac
gnu: lilypond: Fix check for fontforge version.
...
* gnu/packages/music.scm (lilypond)[arguments]: Patch configure script
to find actual fontforge version.
2016-03-25 10:03:11 +01:00
dd21308225
gnu: postgresql: Substitute hard coded "/bin/sh".
...
* gnu/packages/databses.scm (postgresql): substitute /bin/sh
with location of bash binary.
2016-03-25 08:04:56 +01:00
43a58615bf
gnu: htop: Update to 2.0.1.
...
* gnu/packages/admin.scm (htop): Update to 2.0.1.
2016-03-24 23:06:09 -04:00
7feebd33ae
gnu: Add 'info-reader'.
...
* gnu/packages/texinfo.scm (info-reader): New variable.
2016-03-24 22:47:15 +01:00
229b36617a
gnu: python-llfuse-0.41: Update to 0.41.1.
...
* gnu/packages/python.scm (python-llfuse-0.41): Update to 0.41.1.
2016-03-24 15:30:51 -04:00
6fc5c11b81
gnu: Add borg.
...
* gnu/packages/backup.scm (borg): New variable.
2016-03-24 15:30:51 -04:00
5a39b07f8a
gnu: attic: Specify dependency on python-llfuse-0.41.
...
* gnu/packages/backup.scm (attic)[inputs]: Specify dependency on
python-llfuse-0.41.
2016-03-24 15:30:51 -04:00
cd0569c498
gnu: python-llfuse: Update to 1.0, keep 0.41 variant.
...
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.0.
(python-llfuse)[properties]: New field.
[license]: Remove 'expat'.
(python2-llfuse): Use 'strip-python2-variant'.
[propagated-inputs]: Add python2-contextlib2.
(python-llfuse-0.41): New variable.
2016-03-24 15:30:51 -04:00
bd74be7b8c
gnu: python-msgpack: Use 'python2-variant'.
...
* gnu/packages/python.scm (python-msgpack)[native-inputs]: Remove field.
[properties]: New field.
(python2-msgpack): Use 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
2016-03-24 15:30:51 -04:00
ae831df428
gnu: python-msgpack: Update to 0.4.7.
...
* gnu/packages/python.scm (python-msgpack, python2-msgpack): Update to 0.4.7.
[source]: Use pypi-uri.
2016-03-24 15:30:51 -04:00
1d216b6ec9
gnu: Remove "r-repository" property.
...
* gnu/packages/bioinformatics.scm (r-biocgenerics, r-s4vectors,
r-iranges, r-genomeinfodb, r-xvector, r-genomicranges)[properties]:
Remove "r-repository" property.
2016-03-24 16:18:01 +01:00
08595262db
gnu: pari-gp: Syntactic changes.
...
* gnu/packages/algebra.scm (pari-gp)[arguments]: Use modify-phases syntax.
2016-03-24 14:44:08 +01:00
473dbe9b19
gnu: modem-manager: Update to 1.4.14.
...
* gnu/packages/freedesktop.scm (modem-manager): Update to 1.4.14.
2016-03-24 08:37:07 +02:00
385b1be8d0
gnu: webkitgtk: Update to 2.12.0.
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.12.0.
2016-03-23 18:47:41 -04:00
ee37e1e501
gnu: shepherd: Update to 0.3.1.
...
* gnu/packages/admin.scm (shepherd): Update to 0.3.1.
2016-03-23 23:43:50 +01:00
7b150a24fe
gnu: libressl: Update to 2.3.3.
...
* gnu/packages/tls.scm (libressl): Update to 2.3.3.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-03-23 13:39:17 -04:00
c1f73569be
gnu: Add AIDE.
...
* gnu/packages/admin.scm (aide): New variable.
2016-03-23 08:08:02 +01:00
6139fed563
gnu: icecast: Update to 2.4.3 [fixes CVE-2015-3026].
...
* gnu/packages/xiph.scm (icecast): Update to 2.4.3.
2016-03-22 23:13:58 -04:00
58cc369f32
gnu: webkitgtk-2.4: Update to 2.4.10 [fixes many security flaws].
...
Fixes CVE-2014-1748, CVE-2015-1071, CVE-2015-1076, CVE-2015-1081,
CVE-2015-1083, CVE-2015-1120, CVE-2015-1122, CVE-2015-1127, CVE-2015-1153,
CVE-2015-1155, CVE-2015-3658, CVE-2015-3659, CVE-2015-3727, CVE-2015-3731,
CVE-2015-3741, CVE-2015-3743, CVE-2015-3745, CVE-2015-3747, CVE-2015-3748,
CVE-2015-3749, CVE-2015-3752, CVE-2015-5788, CVE-2015-5794, CVE-2015-5801,
CVE-2015-5809, CVE-2015-5822, and CVE-2015-5928.
* gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/webkit.scm (webkitgtk-2.4): Update to 2.4.10.
[source]: Remove patch.
2016-03-22 07:38:22 -04:00
1020fb6ac7
gnu: linux-libre-4.1: Update to 4.1.20.
...
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.20.
2016-03-21 22:53:55 -04:00
cd6cc144e0
Merge branch 'security-updates'
2016-03-22 00:14:03 +01:00
ffc13e753b
gnu: chicken: Build with GCC 4.8.
...
* gnu/packages/scheme.scm (chicken)[native-inputs]: Add GCC 4.8.
2016-03-21 22:08:24 +01:00
416a5a9a51
gnu: chicken: Disable port tests.
...
* gnu/packages/scheme.scm (chicken)[arguments]: Do not run port tests.
2016-03-21 22:08:24 +01:00
acb3807079
gnu: chicken: Use "modify-phases" syntax.
...
* gnu/packages/scheme.scm (chicken)[arguments]: Use "modify-phases"
syntax.
2016-03-21 22:08:24 +01:00
d0d9411015
gnu: chicken: Update to 4.10.0.
...
* gnu/packages/scheme.scm (chicken): Update to 4.10.0.
2016-03-21 22:08:23 +01:00
b0bb013698
gnu: mutt: Enable header caching.
...
* gnu/packages/mail.scm (mutt)[inputs]: Add gdbm.
[arguments]: Pass --enable-hcache to #:configure-flags.
2016-03-21 16:48:39 -04:00
506379664a
gnu: gmtp: Update to 1.3.10.
...
* gnu/packages/libusb.scm (gmtp): Update to 1.3.10.
2016-03-21 20:52:26 +02:00
c84ceace14
gnu: artanis: Update to 0.1.2.
...
* gnu/packages/guile.scm (artanis): Update to 0.1.2.
[arguments]: Set DESTDIR.
2016-03-21 17:44:39 +01:00
71cafa0472
gnu: Add r-doparallel.
...
* gnu/packages/statistics.scm (r-doparallel): New variable.
2016-03-21 15:54:05 +01:00
b2cdb0271b
gnu: Add r-foreach.
...
* gnu/packages/statistics.scm (r-foreach): New variable.
2016-03-21 15:54:05 +01:00
7a6f5f0323
gnu: Add r-codetools.
...
* gnu/packages/statistics.scm (r-codetools): New variable.
2016-03-21 15:54:05 +01:00
264df1a49d
gnu: Add r-iterators.
...
* gnu/packages/statistics.scm (r-iterators): New variable.
2016-03-21 15:54:05 +01:00
9128db2178
gnu: Add ustr.
...
* gnu/packages/textutils.scm (ustr): New variable.
2016-03-21 15:53:40 +01:00
ce16d1dc94
gnu: ddrescue: Update to 1.21.
...
* gnu/packages/disk.scm (ddrescue): Update to 1.21.
2016-03-21 15:22:31 +02:00
c035145968
gnu: udisks: Enforce non-reference of the "doc" output.
...
* gnu/packages/freedesktop.scm (udisks)[arguments]: Add
#:disallowed-references.
2016-03-20 22:52:33 +01:00
e71ef7adae
system: Make sure fonts are searched for in the system profile.
...
This fixes a bug whereby fonts in /run/current-system/profile would be
invisible to Fontconfig.
* gnu/packages/fontutils.scm (fontconfig): Add comment about system
profile not being searched.
* gnu/system/shadow.scm (default-skeletons)[fonts.conf-content,
fonts.conf]: New variable.
Add FONTS.CONF to the skeletons.
2016-03-20 15:27:44 +01:00
0bd3597bbe
gnu: gnome: Add dependency on font-abattis-cantarell.
...
* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Add
FONT-CANTARELL.
2016-03-20 15:05:12 +01:00
71be99b8b6
gnu: Add font-abattis-cantarell.
...
* gnu/packages/fonts.scm (font-cantarell): New variable.
2016-03-20 01:07:37 +01:00
329a702634
gnu: fontforge: Make builds bit-reproducible.
...
* gnu/packages/fontutils.scm (fontforge)[source](snippet, modules): New
fields.
2016-03-19 15:57:07 +01:00
56586557dd
gnu: fontforge: Update to 20150824.
...
* gnu/packages/fontutils.scm (fontforge): Update to 20150824.
[inputs]: Add libltdl, libxft, python.
[native-inputs]: New field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-03-19 15:36:26 +01:00
7c49ab5b1c
gnu: kodi: Remove @acronym from description.
...
This works around <http://bugs.gnu.org/21772 >.
* gnu/packages/kodi.scm (crossguid): Remove @acronym.
2016-03-19 14:41:56 +01:00
5697fdc366
gnu: r-dnacopy: Fix home page URL.
...
* gnu/packages/bioinformatics.scm (r-dnacopy)[home-page]: Add missing
URI scheme.
2016-03-18 23:00:04 +01:00
6cbc8d5766
gnu: gnome: Disable hardware acceleration check via 'gnome.desktop'.
...
* gnu/packages/gnome.scm (gnome-session)[arguments]: Add
'disable-hardware-acceleration-check' phase.
2016-03-18 19:42:00 +01:00
a0d7baaf48
gnu: gnome-session: Make sure 'gsettings' is found.
...
* gnu/packages/gnome.scm (gnome-session)[arguments]: Add
'wrap-gnome-session' phase.
2016-03-18 19:42:00 +01:00
3bf429af2f
gnu: Add beets.
...
* gnu/packages/music.scm (beets): New variable.
2016-03-18 14:27:16 -04:00
064503aaa2
gnu: Add python-rarfile.
...
* gnu/packages/python.scm (python-rarfile, python2-rarfile): New
variables.
* gnu/packages/patches/python-rarfile-fix-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2016-03-18 14:27:16 -04:00
13edb0e5c3
gnu: Add python2-unicodecsv.
...
* gnu/packages/python.scm (python2-unicodecsv): New variable.
2016-03-18 14:27:16 -04:00
25a7db0ad3
gnu: Add python-jellyfish.
...
* gnu/packages/python.scm (python-jellyfish, python2-jellyfish): New variables.
2016-03-18 14:27:16 -04:00
efe0b14369
gnu: Add python-mpd2.
...
* gnu/packages/mpd.scm (python-mpd2, python2-mpd2): New variables.
2016-03-18 14:27:16 -04:00
76b9488534
gnu: Add python2-pathlib.
...
* gnu/packages/python.scm (python-pathlib, python2-pathlib): New variables.
2016-03-18 14:27:16 -04:00
0efde7d6d6
gnu: Add python-responses.
...
* gnu/packages/python.scm (python-responses, python2-responses): New variables.
2016-03-18 14:27:16 -04:00
603d665bc3
gnu: Add python-cookies.
...
* gnu/packages/python.scm (python-cookies, python2-cookies): New variable.
2016-03-18 14:27:16 -04:00
acd7351ff6
gnu: Add python-pylast.
...
* gnu/packages/music.scm (python-pylast, python2-pylast): New variables.
2016-03-18 14:27:16 -04:00
e8fee6486f
gnu: Add python-pyechonest.
...
* gnu/packages/music.scm (python-pyechonest, python2-pyechonest): New variables.
2016-03-18 14:27:16 -04:00
f3b3d78fbc
gnu: Add python-flask.
...
* gnu/packages/python.scm (python-flask, python2-flask): New variables.
2016-03-18 14:27:16 -04:00
8975de8821
gnu: Add python-musicbrainzngs.
...
* gnu/packages/music.scm (python-musicbrainzngs, python2-musicbrainzngs): New
variables.
2016-03-18 14:27:16 -04:00
cedac813a5
gnu: Add python-munkres.
...
* gnu/packages/python.scm (python-munkres, python2-munkres): New variables.
2016-03-18 14:27:16 -04:00
3f7a182d25
gnu: Add python-mutagen.
...
* gnu/packages/music.scm (python-mutagen, python2-mutagen): New variables.
2016-03-18 14:27:16 -04:00
0e0fd3ef10
gnu: linux-libre-4.4: Update to 4.4.6.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.6.
2016-03-18 11:03:16 -04:00
8961b4d362
gnu: bundler: Update to 1.11.2.
...
* gnu/packages/ruby.scm (bundler): Update to 1.11.2.
2016-03-18 08:48:40 -04:00
019b38758c
gnu: vigra: Update to 1.11.0.
...
* gnu/packages/image.scm (vigra)[source]: Update to 1.11.0.
[arguments]: Disable parallel builds.
2016-03-18 09:01:02 +01:00
c5e2b69d59
gnu: aria2: Update to 1.21.0.
...
* gnu/packages/bittorrent.scm (aria2): Update to 1.21.0.
2016-03-18 08:29:30 +02:00
Ricardo Wurmus