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33752 Commits

Author SHA1 Message Date
Ricardo Wurmus 1f73fd017c
gnu: r-complexheatmap: Update to 1.18.1. 
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 1.18.1.
 2018-06-21 10:31:22 +02:00
Ricardo Wurmus a1c7016498
gnu: r-delayedarray: Update to 0.6.1. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.6.1.
 2018-06-21 10:31:22 +02:00
Ricardo Wurmus eafd35bad5
gnu: r-optparse: Update to 1.6.0. 
* gnu/packages/bioinformatics.scm (r-optparse): Update to 1.6.0.
 2018-06-21 10:31:22 +02:00
Ricardo Wurmus 1e2b2f41d7
gnu: r-biocviews: Update to 1.48.2. 
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.48.2.
 2018-06-21 10:31:22 +02:00
Pierre Neidhardt 913f1f1ff7
gnu: emacs-evil: Update to 20180517. 
* gnu/packages/emacs.scm (emacs-evil): Update to 20180517.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-06-20 23:47:08 +02:00
Pierre Neidhardt 5a74886ef5
gnu: emacs-evil-mu4e: Deprecate in favor of emacs-evil-collection. 
* gnu/packages/emacs.scm (emacs-evil-mu4e): Deprecate.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-06-20 23:47:08 +02:00
Pierre Neidhardt 1e5fb529d1
gnu: emacs-evil-ediff: Deprecate in favor of emacs-evil-collection. 
* gnu/packages/emacs.scm (emacs-evil-ediff): Deprecate.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-06-20 23:47:08 +02:00
Pierre Neidhardt 9abf135b20
gnu: emacs-evil-collection: Update to 20180617. 
* gnu/packages/emacs.scm (emacs-evil-collection): Update to 20180617.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-06-20 23:47:08 +02:00
Pierre Neidhardt addda2eeb3
gnu: Add emacs-mu4e-conversation. 
* gnu/packages/emacs.scm (emacs-mu4e-conversation): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-06-20 23:47:08 +02:00
Ludovic Courtès 414ee4edc9
Update NEWS. 2018-06-20 23:47:08 +02:00
Ludovic Courtès e203f4c26a
guix system: 'list-generation' correctly displays file system labels. 
* guix/scripts/system.scm (display-system-generation): Correctly display
file system labels.  Previously, starting from commit
a5acc17a3c, it'd print #<file-system-label "foo">.
 2018-06-20 23:47:08 +02:00
Ludovic Courtès 378daa8cb6
services: boot: Take gexps instead of monadic gexps. 
* gnu/services.scm (compute-boot-script): Rename 'mexps' to 'gexps' and
remove 'mlet' form.
(boot-service-type): Update comment.
(cleanup-gexp): Remove 'with-monad' and 'return'.
(activation-script): Rewrite in non-monadic style: use 'scheme-file'
instead of 'gexp->file'.
(gexps->activation-gexp): Remove 'mlet', return a gexp.
* gnu/services/shepherd.scm (shepherd-boot-gexp): Remove 'with-monad'
and 'return'.
* gnu/system.scm (operating-system-boot-script): Remove outdated comment.
* gnu/tests/base.scm (%cleanup-os): For 'dirty-service', remove
'with-monad' and 'return'.
 2018-06-20 23:47:08 +02:00
Ludovic Courtès 636bb2b5e3
services: Add description to core services. 
* gnu/services.scm (system-service-type, boot-service-type)
(cleanup-service-type, activation-service-type)
(special-files-service-type, etc-service-type)
(setuid-program-service-type, profile-service-type)
(firmware-service-type, gc-root-service-type): Add 'description' field.
 2018-06-20 23:47:07 +02:00
Julien Lepiller 6a8d338158
gnu: ocaml: Build reproducibly. 
* gnu/packages/patches/ocaml-enable-ocamldoc-reproducibility.patch: New
file.
* gnu/packages/ocaml.scm (ocaml)[origin]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-06-20 21:26:16 +02:00
Rouby Pierre-Antoine aed4944d51
gnu: Add go-github-com-ayufan-golang-kardianos-service. 
* gnu/packages/golang.scm (go-github-com-ayufan-golang-kardianos-service): New
variable.
 2018-06-20 12:55:01 -04:00
Leo Famulari 5cc2b8456f
gnu: Move go-github-com-kardianos-osext to (gnu packages golang). 
This package will not be used in later versions of Syncthing but may be needed
by other Go programs.

* gnu/packages/syncthing.scm (go-github-com-kardianos-osext): Move to ...
* gnu/packages/golang.scm: ... here.
 2018-06-20 12:55:01 -04:00
Rouby Pierre-Antoine 7427b2c6c1
gnu: Add go-github-com-sirupsen-logrus. 
* gnu/packages/golang.scm (go-github-com-sirupsen-logrus): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-06-20 12:55:01 -04:00
Nils Gillmann 6a18183f4b
services: Fix GPLv3 header in cuirass and pm modules. 
* gnu/services/cuirass.scm, gnu/services/pm.scm: Adjust to canonical GPLv3
header used throughout Guix.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-06-20 12:16:11 -04:00
Marius Bakke b7a46ed227
gnu: openblas: Fix build on i686. 
* gnu/packages/patches/openblas-fix-tests-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/maths.scm (openblas)[native-inputs]: Add it.
[arguments]: Add phase to apply it on i686 systems only.
 2018-06-20 16:02:04 +02:00
Gábor Boskovits 780205a04b
gnu: Add go-github-com-prometheus-node-exporter. 
* gnu/packages/monitoring.scm (go-github-com-prometheus-node-exporter):
New variable.
 2018-06-20 14:50:25 +02:00
Tobias Geerinckx-Rice 7e04f210e3
gnu: neofetch: Don't use auto-generated tarball. 
* gnu/packages/admin.scm (neofetch)[source]: Use GIT-FETCH.
 2018-06-20 14:39:54 +02:00
Tobias Geerinckx-Rice acb1c72c1e
gnu: neofetch: Remove dead code. 
Turns out that's most of it.

* gnu/packages/admin.scm (neofetch)[arguments]: Remove all custom
phases.
 2018-06-20 14:39:54 +02:00
Ricardo Wurmus 00fca594da
gnu: Add guile-chickadee. 
* gnu/packages/game-development.scm (guile-chickadee): New variable.
 2018-06-20 11:28:09 +02:00
Ricardo Wurmus e5b77ccfe8
gnu: guile-sdl2: Install compiled files to the expected place. 
* gnu/packages/sdl.scm (guile-sdl2)[arguments]: Add build phase
"patch-makefile".
 2018-06-20 11:28:09 +02:00
Rutger Helling 229e4d59f5
gnu: neofetch: Update to 5.0.0. 
* gnu/packages/admin.scm (neofetch): Update to 5.0.0.
 2018-06-20 11:08:31 +02:00
Ludovic Courtès 76c321d8e8
services: cleanup: Expect file names to be UTF-8-encoded. 
Fixes <https://bugs.gnu.org/26353>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/services.scm (cleanup-gexp): Add 'setenv' and 'setlocale' calls
before 'delete-file-recursively'.
* gnu/tests/base.scm (%cleanup-os, %test-cleanup): New variables.
(run-cleanup-test): New procedure.
 2018-06-20 10:05:18 +02:00
Ludovic Courtès 661c237b4d
services: boot: Reverse the order of boot expressions. 
* gnu/services.scm (compute-boot-script): Reverse MEXPS.
* gnu/system.scm (essential-services): Reverse order of
%SHEPHERD-ROOT-SERVICE, %ACTIVATION-SERVICE, and CLEANUP-SERVICE-TYPE.
 2018-06-20 10:05:18 +02:00
Tobias Geerinckx-Rice 80f755090d
gnu: perl-lwp-protocol-https: Update to 6.07. 
* gnu/packages/web.scm (perl-lwp-protocol-https): Update to 6.07.
[native-inputs]: Add perl-test-requiresinternet.
 2018-06-20 04:56:38 +02:00
Tobias Geerinckx-Rice bdf1fe51d5
gnu: meandmyshadow: Update to 0.4.1. 
* gnu/packages/games.scm (meandmyshadow): Update to 0.4.1.
 2018-06-20 04:56:37 +02:00
Tobias Geerinckx-Rice de0dfb8c0b
gnu: meandmyshadow: Return #t from phases. 
* gnu/packages/games.scm (meandmyshadow)[arguments]: Return #t rather
than undefined from phases.
 2018-06-20 04:56:37 +02:00
Tobias Geerinckx-Rice 5bc0ac962c
gnu: extremetuxracer: Fix typo in synopsis. 
* gnu/packages/games.scm (extremetuxracer)[synopis]: Hyphenate.
 2018-06-20 04:56:37 +02:00
Tobias Geerinckx-Rice 101460d461
gnu: extremetuxracer: Update to 0.7.5. 
* gnu/packages/games.scm (extremetuxracer): Update to 0.7.5.
 2018-06-20 04:56:36 +02:00
Tobias Geerinckx-Rice 1b915698a0
gnu: quakespasm: Update to 0.93.1. 
* gnu/packages/games.scm (quakespasm): Update to 0.93.1.
 2018-06-20 04:56:36 +02:00
Tobias Geerinckx-Rice 6ad191ba10
gnu: fizmo: Update home page. 
* gnu/packages/games.scm (fizmo)[source, home-page]: Update URIs.
 2018-06-20 04:56:36 +02:00
Tobias Geerinckx-Rice 50e1d36c48
gnu: fizmo: Update to 0.8.5. 
* gnu/packages/games.scm (fizmo): Update to 0.8.5.
[arguments]: Adjust #:configure-flags to improved library detection.
 2018-06-20 04:56:36 +02:00
Tobias Geerinckx-Rice 59e8a57d08
gnu: pioneers: Update to 15.5. 
* gnu/packages/games.scm (pioneers): Update to 15.5.
[native-inputs]: Add itstool and libxml2.
 2018-06-20 04:56:35 +02:00
Tobias Geerinckx-Rice aa86a56463
gnu: emacs-d-mode: Update to 2.0.9. 
* gnu/packages/emacs.scm (emacs-d-mode): Update to 2.0.9.
 2018-06-20 04:56:35 +02:00
Tobias Geerinckx-Rice 80683c1e00
gnu: emacs-htmlize: Update to 1.53. 
* gnu/packages/emacs.scm (emacs-htmlize): Update to 1.53.
 2018-06-20 04:56:34 +02:00
Tobias Geerinckx-Rice 3321234cf3
gnu: r-recipes: Update to 0.1.3. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.3.
[propagated-inputs]: Add r-pls.
 2018-06-20 04:56:34 +02:00
Tobias Geerinckx-Rice a86049d9b6
gnu: Add r-pls. 
* gnu/packages/cran.scm (r-pls): New public variable.
 2018-06-20 04:56:34 +02:00
Tobias Geerinckx-Rice 0430eb6643
gnu: r-prroc: Update to 1.3.1. 
* gnu/packages/cran.scm (r-prroc): Update to 1.3.1.
 2018-06-20 04:56:34 +02:00
Tobias Geerinckx-Rice cd0750fcf2
gnu: memcached: Update to 1.5.8. 
* gnu/packages/databases.scm (memcached): Update to 1.5.8.
 2018-06-20 04:56:33 +02:00
Tobias Geerinckx-Rice d4c68d3236
gnu: emacs-m-buffer-el: Return #t from phases. 
* gnu/packages/emacs.scm (emacs-m-buffer-el)[arguments]: Substitute
INVOKE for SYSTEM*.
 2018-06-20 04:56:33 +02:00
Tobias Geerinckx-Rice bca4b2e7cc
gnu: emacs-xelb: Return #t from phases. 
* gnu/packages/emacs.scm (emacs-xelb)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-20 04:56:33 +02:00
Tobias Geerinckx-Rice 2f48416f47
gnu: emacs-ess: Return #t from phases. 
* gnu/packages/emacs.scm (emacs-ess)[arguments]: Substitute INVOKE for
SYSTEM* and return #t where otherwise undefined.
 2018-06-20 04:56:32 +02:00
Tobias Geerinckx-Rice e97ad01e4d
gnu: emacs-ivy: Return #t from phases. 
* gnu/packages/emacs.scm (emacs-ivy)[arguments]: Substitute INVOKE for
SYSTEM* and return #t where otherwise undefined.
 2018-06-20 04:56:32 +02:00
Tobias Geerinckx-Rice e76d959d6a
gnu: emacs-slime: Use INVOKE. 
* gnu/packages/emacs.scm (emacs-slime)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-20 04:56:31 +02:00
Tobias Geerinckx-Rice d2f3817d69
gnu: emacs-pdf-tools: Return #t from phases. 
As I read it, EMACS-SUBSTITUTE-VARIABLES always returns #t.

* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-06-20 04:56:31 +02:00
Tobias Geerinckx-Rice 32a8a6bb60
gnu: emacs-mmm-mode: Return #t from phases. 
* gnu/packages/emacs.scm (emacs-mmm-mode)[arguments]: Substitute INVOKE
for SYSTEM*.
 2018-06-20 04:56:31 +02:00
Tobias Geerinckx-Rice 8bc1967503
gnu: emacs-graphviz-dot-mode: Return #t from phases. 
* gnu/packages/emacs.scm (emacs-graphviz-dot-mode)[arguments]:
Substitute INVOKE for SYSTEM*.
 2018-06-20 04:56:30 +02:00