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46286 Commits

Author SHA1 Message Date
Ricardo Wurmus 417f7ed58d
gnu: r-recipes: Update to 0.1.6. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.6.
[propagated-inputs]: Remove r-rcpproll.
 2019-08-06 15:48:54 +02:00
Ricardo Wurmus a80620b96d
gnu: r-geometry: Update to 0.4.2. 
* gnu/packages/cran.scm (r-geometry): Update to 0.4.2.
[propagated-inputs]: Add r-linprog.
 2019-08-06 15:48:54 +02:00
Ricardo Wurmus f3640cee10
gnu: Add r-linprog. 
* gnu/packages/cran.scm (r-linprog): New variable.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 099b7c55bb
gnu: r-lava: Update to 1.6.6. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.6.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 3337fd1dce
gnu: r-energy: Update to 1.7-6. 
* gnu/packages/cran.scm (r-energy): Update to 1.7-6.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 80cdd36fe8
gnu: r-lpsolve: Update to 5.6.13.2. 
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.2.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 4522ec869b
gnu: r-rcpp: Update to 1.0.2. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.2.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus cd7e9fb161
gnu: r-pkgbuild: Update to 1.0.4. 
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.4.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus b89805fe14
gnu: r-haven: Update to 2.1.1. 
* gnu/packages/cran.scm (r-haven): Update to 2.1.1.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus b44c12057b
gnu: r-curl: Update to 4.0. 
* gnu/packages/cran.scm (r-curl): Update to 4.0.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 3e0128ec36
gnu: r-callr: Update to 3.3.1. 
* gnu/packages/cran.scm (r-callr): Update to 3.3.1.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 6a04f25faf
gnu: r-ellipsis: Update to 0.2.0.1. 
* gnu/packages/cran.scm (r-ellipsis): Update to 0.2.0.1.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 710ecc9ceb
gnu: r-clipr: Update to 0.7.0. 
* gnu/packages/cran.scm (r-clipr): Update to 0.7.0.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus d36430d274
gnu: r-desolve: Update to 1.24. 
* gnu/packages/maths.scm (r-desolve): Update to 1.24.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 17e43c425d
gnu: r-quantreg: Update to 5.42.1. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.42.1.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 599fbee5fb
gnu: r-pbapply: Update to 1.4-1. 
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-1.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 0910ff0cfc
gnu: r-robust: Update to 0.4-18.1. 
* gnu/packages/statistics.scm (r-robust): Update to 0.4-18.1.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus ddfd0afb2a
gnu: r-mclust: Update to 5.4.5. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.5.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 58aa971fbd
gnu: r-fastica: Update to 1.2-2. 
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-2.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus db93ef0948
gnu: r-cowplot: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-cowplot): Update to 1.0.0.
[propagated-inputs]: Remove r-plyr; add r-rlang.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus b2fea05954
gnu: r-rngtools: Update to 1.4. 
* gnu/packages/statistics.scm (r-rngtools): Update to 1.4.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 8d84a0ad70
gnu: r-domc: Update to 1.3.6. 
* gnu/packages/statistics.scm (r-domc): Update to 1.3.6.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 862959813f
gnu: r-doparallel: Update to 1.0.15. 
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.15.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 5a01128f45
gnu: r-foreach: Update to 1.4.7. 
* gnu/packages/statistics.scm (r-foreach): Update to 1.4.7.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus b41d03dd35
gnu: r-iterators: Update to 1.0.12. 
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.12.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 90752043dd
gnu: r-rsqlite: Update to 2.1.2. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.2.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 2de0f885f4
gnu: r-blob: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-blob): Update to 1.2.0.
[propagated-inputs]: Add r-rlang and r-vctrs; remove r-tibble.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus feb261ee9b
gnu: r-rmarkdown: Update to 1.14. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.14.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 6af62ad50a
gnu: r-rcpparmadillo: Update to 0.9.600.4.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.600.4.0.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9b02d1c836
gnu: r-hms: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-hms): Update to 0.5.0.
[propagated-inputs]: Add r-vctrs.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 78896ba23b
gnu: r-devtools: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 2.1.0.
[propagated-inputs]: Add r-roxygen2 and r-testthat.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 1df87085e3
gnu: r-git2r: Update to 0.26.1. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.26.1.
[inputs]: Remove libssh2 and openssl; add libgit2.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9236b2c144
gnu: r-httr: Update to 1.4.1. 
* gnu/packages/statistics.scm (r-httr): Update to 1.4.1.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 3511aff992
gnu: r-openssl: Update to 1.4.1. 
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.1.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus c02bb7e901
gnu: r-checkmate: Update to 1.9.4. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.4.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus b29ecb8e37
gnu: r-xml2: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.1.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 8d932e71d6
gnu: r-coda: Update to 0.19-3. 
* gnu/packages/statistics.scm (r-coda): Update to 0.19-3.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 7d36001bd2
gnu: r-dplyr: Update to 0.8.3. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.3.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus eae8e56a64
gnu: r-testthat: Update to 2.2.1. 
* gnu/packages/statistics.scm (r-testthat): Update to 2.2.1.
[propagated-inputs]: Add r-evaluate.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus c2e85d0265
gnu: r-digest: Update to 0.6.20. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.20.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus d6e54e7002
gnu: r-nlme: Update to 3.1-141. 
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-141.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus ecebfe51ce
gnu: r-foreign: Update to 0.8-72. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-72.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus 6eccb0879f
gnu: r-boot: Update to 1.3-23. 
* gnu/packages/statistics.scm (r-boot): Update to 1.3-23.
 2019-08-06 15:48:50 +02:00
Rutger Helling 49fd98bf65
gnu: faudio: Update to 19.08. 
* gnu/packages/audio.scm (faudio): Update to 19.08.
 2019-08-06 13:09:23 +02:00
Rutger Helling 932f795c0e
gnu: kitty: Update to 0.14.3. 
* gnu/packages/terminals.scm (kitty): Update to 0.14.3.
[inputs]: Add libcanberra.
 2019-08-06 13:06:25 +02:00
Brian Leung 6a5198170e
gnu: emacs-ivy: Update to 0.12.0-1.d3e4514. 
* gnu/packages/emacs-xyz.scm (emacs-ivy): Update to 0.12.0-1.d3e4514.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-06 09:41:44 +02:00
Mark H Weaver aac6c53a7b
gnu: libmad: Add more security fixes from Debian. 
Includes fixes for CVE-2017-8372, CVE-2017-8373, and CVE-2017-8374.

Reported by <marit@secmail.pro> in <https://bugs.gnu.org/36909>.

* gnu/packages/patches/libmad-frame-length.patch: Delete file.
* gnu/packages/patches/libmad-length-check.patch,
gnu/packages/patches/libmad-md_size.patch: New files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/mp3.scm (libmad)[source]: Update patches accordingly.
 2019-08-06 03:18:24 -04:00
Rutger Helling b0c48829b6
gnu: flatpak: Update to 1.4.2. 
* gnu/packages/package-management.scm (flatpak): Update to 1.4.2.
 2019-08-06 08:25:35 +02:00
Marius Bakke 2426e2c94c
gnu: strace: Fix test failures on some systems. 
* gnu/packages/patches/strace-ipc-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (strace)[source](patches): New field.
[arguments]: Add 'regenerate-tests' phase.

Co-Authored-By: Mark H Weaver <mhw@netris.org>
 2019-08-06 02:17:38 -04:00
Tobias Geerinckx-Rice 96681d4be1
gnu: terminator: Wrap instead of propagating GSettings schemas. 
* gnu/packages/gnome.scm (terminator)[inputs]:
Move gsettings-desktop-schemas back here…
[propagated-inputs]: …from here.
[arguments]: Add the glib-or-gtk-build-system's ‘glib-or-gtk-wrap’
phase.
 2019-08-05 22:18:57 +02:00