455859a50f
Merge branch 'core-updates'
2016-08-01 23:30:52 +02:00
5e74529271
gnu: units: Update to 2.13.
...
* gnu/packages/maths.scm (units): Update to 2.13.
2016-08-01 01:11:57 +02:00
a3947cb1b8
gnu: Sync GNU descriptions with upstream.
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From 'guix lint -c gnu-description'.
* gnu/packages/gnunet.scm (gnunet): Adjust description.
* gnu/packages/marst.scm (marst): Likewise.
* gnu/packages/maths.scm (c-graph): Likewise.
* gnu/packages/networking.scm (macchanger): Likewise.
2016-07-29 10:13:12 +02:00
430e67a459
gnu: gnuplot: Update to upstream's re-release of 5.0.4.
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* gnu/packages/maths.scm (gnuplot): Add a guix revision number to the
version scheme of gnuplot to force an update.
2016-07-22 18:24:22 +03:00
d7cff656df
gnu: muparser: Update source URL.
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* gnu/packages/maths.scm (muparser)[source]: Update source URL to new location.
Use URL-FETCH instead of SVN-FETCH. Update hash and package revision.
2016-07-21 18:25:20 -04:00
de67e92288
gnu: Update URLs for sourceforge.net.
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* gnu/packages/admin.scm: Update URLs pointing to sourceforge.net.
* gnu/packages/audacity.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/bioinformatics.scm: Likewise.
* gnu/packages/boost.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/code.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/cups.scm: Likewise.
* gnu/packages/djvu.scm: Likewise.
* gnu/packages/docbook.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/flashing-tools.scm: Likewise.
* gnu/packages/fonts.scm: Likewise.
* gnu/packages/fontutils.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/ghostscript.scm: Likewise.
* gnu/packages/gl.scm: Likewise.
* gnu/packages/gnucash.scm: Likewise.
* gnu/packages/graphviz.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/libreoffice.scm: Likewise.
* gnu/packages/libusb.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/lirc.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mcrypt.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/networking.scm: Likewise.
* gnu/packages/onc-rpc.scm: Likewise.
* gnu/packages/password-utils.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/popt.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/rdesktop.scm: Likewise.
* gnu/packages/screen.scm: Likewise.
* gnu/packages/swig.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/wm.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xml.scm: Likewise.
2016-07-21 18:09:40 -04:00
a9c64810cd
gnu: gnuplot: Update to 5.0.4.
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* gnu/packages/maths.scm (gnuplot): Update to 5.0.4.
2016-07-21 13:56:51 +03:00
2908087013
gnu: superlu-dist: Remove non-free source.
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* gnu/packages/maths.scm (superlu-dist)[source]: Replace non-free
mc64ad.c source with stub.
2016-07-20 21:16:25 -05:00
8787c555d9
gnu: slepc: Update to 3.7.1.
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* gnu/packages/maths.scm (slepc): Update to 3.7.1.
2016-07-20 21:16:25 -05:00
fafd623e49
gnu: petsc: Update to 3.7.2.
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* gnu/packages/maths.scm (petsc): Update to 3.7.2.
[arguments]: Adjust scrubbed files.
2016-07-20 21:16:24 -05:00
b730b43770
gnu: petsc: Make header generation reproducible.
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* gnu/packages/maths.scm (petsc)[arguments]: Scrub timestamp from
petscmachineinfo.h header.
2016-07-20 21:16:24 -05:00
64dcc28963
gnu: petsc: Use modify-phases.
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* gnu/packages/maths.scm (petsc)[arguments]: Use modify-phases.
2016-07-20 21:16:24 -05:00
995a09e055
gnu: superlu: Update to 5.2.1.
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* gnu/packages/maths.scm (superlu): Update to 5.2.1.
[source]: Remove non-free MC64 code.
[inputs]: Use openblas instead of lapack's BLAS.
[build-system]: Use cmake-build-system.
[arguments]: Remove custom phases and replace with CMake flags.
[license]: List additional licenses for some source and example files.
2016-07-20 18:31:16 -05:00
d721c83a63
gnu: Add libhilbert.
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* gnu/packages/maths.scm (libhilbert): New variable.
2016-07-20 18:31:16 -05:00
8e9ba611cb
gnu: atlas: Use @example in description.
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* gnu/packages/maths.scm (atlas)[description]: Use "@example".
2016-07-19 23:03:30 +02:00
d97c429a34
gnu: atlas: Use cpupower in description.
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* gnu/packages/maths.scm (atlas)[description]: Replace 'cpufreq-selector'
with its replacement 'cpupower --governor'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
7b569b01d3
gnu: lapack: Build the LAPACKE library.
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* gnu/packages/maths.scm (lapack)[arguments]: Add "-DLAPACKE=ON".
2016-07-17 11:09:31 +02:00
49f54a7454
gnu: openspecfun: Update to 0.5.2.
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* gnu/packages/maths.scm (openspecfun): Update to 0.5.2.
2016-07-03 10:14:16 +03:00
26f6e565a9
gnu: openlibm: Update to 0.5.1.
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* gnu/packages/maths.scm (openlibm): Update to 0.5.1.
2016-07-03 10:07:17 +03:00
468e0b18d1
gnu: ceres-solver: Propagate GLOG.
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* gnu/packages/maths.scm (ceres)[inputs]: Move GLOG to...
[propagated-inputs]: ... here. New field.
2016-06-29 16:08:46 +02:00
bc3a2e3503
gnu: ceres-solver: Depend on glog.
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* gnu/packages/maths.scm (ceres)[arguments]: Remove -DMINIGLOG=ON.
[inputs]: Add GLOG.
2016-06-29 12:01:05 +02:00
ad1c453731
gnu: ipopt: Use libblas from LAPACK, and fix 'Libs' in 'ipopt.pc'.
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* gnu/packages/maths.scm (ipopt)[inputs]: Remove OPENBLAS.
[arguments]: New field.
2016-06-03 14:37:26 +02:00
f9940ef1e8
gnu: Add ceres-solver.
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* gnu/packages/maths.scm (ceres): New variable.
2016-06-03 13:54:39 +02:00
005c787d59
gnu: Add IpOpt.
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* gnu/packages/maths.scm (ipopt): New variable.
2016-06-02 19:11:14 +02:00
de477809d7
gnu: wxmaxima: Wrap with GSETTINGS_SCHEMA_DIR and XDG_DATA_DIRS.
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Fixes <http://bugs.gnu.org/22709 > and <http://bugs.gnu.org/23260 >.
* gnu/packages/math.scm (wxmaxima)[arguments]: Wrap with
GSETTINGS_SCHEMA_DIR and XDG_DATA_DIRS.
2016-05-28 07:29:10 +08:00
8f9ac90182
gnu: Rename texlive module to tex.
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* gnu/local.mk (GNU_SYSTEM_MODULES): Rename texlive.scm to tex.scm.
* gnu/packages/texlive.scm: Rename file to tex.scm.
* gnu/packages/tex.scm: Renamed from texlive.scm.
* gnu/packages/algebra.scm: Adjust accordingly.
* gnu/packages/docbook.scm: Likewise.
* gnu/packages/engineering.scm: Likewise.
* gnu/packages/gettext.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/lisp.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/ocaml.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/plotutils.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/scheme.scm: Likewise.
2016-05-26 10:22:05 +02:00
813efdded1
gnu: r-rcpparmadillo: Update to 0.6.700.6.0.
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* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.6.0.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
6.700.6.
2016-05-20 15:18:23 +02:00
945eef85c5
gnu: armadillo: Update to 6.700.7.
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* gnu/packages/maths.scm (armadillo): Update to 6.700.7.
2016-05-20 15:18:23 +02:00
9684e30b9b
gnu: flann: Do not install .a files.
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* gnu/packages/maths.scm (flann)[arguments]: Add #:phases.
2016-05-19 14:51:21 +02:00
39b3033731
gnu: flann: Strip .mex file.
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* gnu/packages/maths.scm (flann)[arguments]: Add #:strip-directories.
2016-05-19 14:51:21 +02:00
b7b27a8f28
gnu: octave: Update to 4.0.2.
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* gnu/packages/maths.scm (octave): Update to 4.0.2.
[inputs]: Added cyrus-sasl, openssl.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-05-19 04:32:23 +03:00
66395a6157
gnu: gmsh: Add missing inputs.
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* gnu/packages/maths.scm (gmsh)[inputs]: Add fontconfig, libxft.
2016-05-16 10:18:43 +03:00
e6a905070a
gnu: wxmaxima: Update to 16.04.2.
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* gnu/packages/maths.scm (wxmaxima): Update to 16.04.2.
2016-05-15 15:49:35 +08:00
889187a464
gnu: Add NetCDF.
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* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): New variables.
2016-05-12 19:59:53 +00:00
6c90e183cf
gnu: Add Matio.
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* gnu/packages/maths.scm (matio): New variable.
2016-05-12 19:59:52 +00:00
00775104ee
gnu: Add h5check.
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* gnu/packages/maths.scm (h5check): New variable.
2016-05-12 19:59:52 +00:00
c8378eea10
gnu: Add hdf5-openmpi.
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* gnu/packages/maths.scm (hdf5-openmpi): New variable.
2016-05-12 19:59:52 +00:00
b8d9c93bde
gnu: hdf5: Have configure honor SOURCE_DATE_EPOCH.
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* gnu/packages/patches/hdf5-config-date.patch: New patch.
* gnu/packages/maths.scm (hdf5)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
2016-05-12 19:59:52 +00:00
f622e2123b
gnu: hdf5: Patch output references to zlib.
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* gnu/packages/maths.scm (hdf5)[arguments]: Use modify-phases. Add
'patch-references' phase.
2016-05-12 19:59:52 +00:00
04b7a7cd10
gnu: hdf5: Update to 1.8.17.
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* gnu/packages/maths.scm (hdf5): Update to 1.8.17.
2016-05-12 19:59:52 +00:00
528bb46436
gnu: Add HYPRE.
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* gnu/packages/maths.scm (hypre, hypre-openmpi): New variables.
* gnu/packages/patches/hypre-doc-tables.patch,
gnu/packages/patches/hypre-ldflags.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
2016-05-12 19:59:52 +00:00
1b39a196f8
gnu: Add nlopt.
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* gnu/packages/maths.scm (nlopt): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-05-03 21:57:05 +02:00
c5ad883b16
gnu: r-rcpparmadillo: Update to 0.6.700.3.0.
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* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 6.700.3.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.3.0.
2016-04-26 17:06:18 +02:00
458b47e31b
gnu: armadillo: Update to 6.700.4.
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* gnu/packages/maths.scm (armadillo): Update to 6.700.4.
2016-04-20 14:21:30 +02:00
fc1adab148
gnu: packages: Use 'search-patches' everywhere.
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* gnu/packages/abiword.scm: Use 'search-patches' for 'patches' field.
* gnu/packages/acl.scm: Likewise.
* gnu/packages/admin.scm: Likewise.
* gnu/packages/algebra.scm: Likewise.
* gnu/packages/animation.scm: Likewise.
* gnu/packages/apr.scm: Likewise.
* gnu/packages/audacity.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/autotools.scm: Likewise.
* gnu/packages/avahi.scm: Likewise.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/base.scm: Likewise.
* gnu/packages/bash.scm: Likewise.
* gnu/packages/bioinformatics.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/ci.scm: Likewise.
* gnu/packages/cmake.scm: Likewise.
* gnu/packages/cpio.scm: Likewise.
* gnu/packages/cross-base.scm: Likewise.
* gnu/packages/dico.scm: Likewise.
* gnu/packages/doxygen.scm: Likewise.
* gnu/packages/ebook.scm: Likewise.
* gnu/packages/elf.scm: Likewise.
* gnu/packages/emacs.scm: Likewise.
* gnu/packages/engineering.scm: Likewise.
* gnu/packages/firmware.scm: Likewise.
* gnu/packages/flashing-tools.scm: Likewise.
* gnu/packages/fltk.scm: Likewise.
* gnu/packages/ftp.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gawk.scm: Likewise.
* gnu/packages/gcc.scm: Likewise.
* gnu/packages/gd.scm: Likewise.
* gnu/packages/ghostscript.scm: Likewise.
* gnu/packages/glib.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/gnucash.scm: Likewise.
* gnu/packages/gnunet.scm: Likewise.
* gnu/packages/gnupg.scm: Likewise.
* gnu/packages/gnuzilla.scm: Likewise.
* gnu/packages/graphics.scm: Likewise.
* gnu/packages/grub.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/guile.scm: Likewise.
* gnu/packages/icu4c.scm: Likewise.
* gnu/packages/idutils.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/imagemagick.scm: Likewise.
* gnu/packages/irc.scm: Likewise.
* gnu/packages/ldc.scm: Likewise.
* gnu/packages/libcanberra.scm: Likewise.
* gnu/packages/libevent.scm: Likewise.
* gnu/packages/libreoffice.scm: Likewise.
* gnu/packages/libunwind.scm: Likewise.
* gnu/packages/libusb.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/lirc.scm: Likewise.
* gnu/packages/llvm.scm: Likewise.
* gnu/packages/lsh.scm: Likewise.
* gnu/packages/lua.scm: Likewise.
* gnu/packages/lxqt.scm: Likewise.
* gnu/packages/mail.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mcrypt.scm: Likewise.
* gnu/packages/messaging.scm: Likewise.
* gnu/packages/mit-krb5.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/multiprecision.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/ninja.scm: Likewise.
* gnu/packages/nvi.scm: Likewise.
* gnu/packages/ocaml.scm: Likewise.
* gnu/packages/orpheus.scm: Likewise.
* gnu/packages/ots.scm: Likewise.
* gnu/packages/parallel.scm: Likewise.
* gnu/packages/patchutils.scm: Likewise.
* gnu/packages/pcre.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/plotutils.scm: Likewise.
* gnu/packages/polkit.scm: Likewise.
* gnu/packages/pulseaudio.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/qemu.scm: Likewise.
* gnu/packages/qt.scm: Likewise.
* gnu/packages/ratpoison.scm: Likewise.
* gnu/packages/rdf.scm: Likewise.
* gnu/packages/readline.scm: Likewise.
* gnu/packages/rush.scm: Likewise.
* gnu/packages/scheme.scm: Likewise.
* gnu/packages/screen.scm: Likewise.
* gnu/packages/sdl.scm: Likewise.
* gnu/packages/slim.scm: Likewise.
* gnu/packages/ssh.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/tcsh.scm: Likewise.
* gnu/packages/texinfo.scm: Likewise.
* gnu/packages/tls.scm: Likewise.
* gnu/packages/tor.scm: Likewise.
* gnu/packages/tv.scm: Likewise.
* gnu/packages/valgrind.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/vpn.scm: Likewise.
* gnu/packages/vtk.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/wicd.scm: Likewise.
* gnu/packages/wm.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xfce.scm: Likewise.
* gnu/packages/xiph.scm: Likewise.
* gnu/packages/xml.scm: Likewise.
* gnu/packages/xorg.scm: Likewise.
* gnu/packages/zip.scm: Likewise.
2016-04-14 10:38:21 +03:00
ec8c7e4734
gnu: Add r-pracma.
...
* gnu/packages/maths.scm (r-pracma): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-12 14:55:10 -04:00
9c45c51992
gnu: Add c-graph.
...
* gnu/packages/maths.scm (c-graph): New variable.
2016-04-09 09:16:48 +02:00
53696f10c1
gnu: Add cddlib.
...
* gnu/packages/maths.scm (cddlib): New variable.
2016-04-05 19:22:36 +02:00
b146763a86
gnu: Add 4ti2.
...
* gnu/packages/maths.scm (4ti2): New variable.
2016-04-05 18:48:02 +02:00
0b65f1a013
gnu: Move pspp from maths.scm to statistics.scm
...
* gnu/packages/maths.scm (pspp): Deleted.
* gnu/packages/statistics.scm (pspp): New variable.
2016-04-04 07:15:14 +02:00
Ludovic Courtès