53dbf3a2ac
gnu: r-future: Update to 1.13.0.
...
* gnu/packages/cran.scm (r-future): Update to 1.13.0.
2019-05-11 12:05:34 +02:00
407a04fa03
gnu: r-grimport2: Update to 0.1-5.
...
* gnu/packages/cran.scm (r-grimport2): Update to 0.1-5.
2019-05-11 12:05:33 +02:00
a75c6d9c63
gnu: r-rcmdcheck: Update to 1.3.3.
...
* gnu/packages/cran.scm (r-rcmdcheck): Update to 1.3.3.
2019-05-11 12:05:33 +02:00
c02f574d38
gnu: r-fs: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-fs): Update to 1.3.1.
2019-05-11 12:05:33 +02:00
86ad5dbc62
gnu: r-parsedate: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-parsedate): Update to 1.2.0.
[propagated-inputs]: Add r-rematch2.
2019-05-11 12:05:33 +02:00
4d970db846
gnu: r-processx: Update to 3.3.1.
...
* gnu/packages/cran.scm (r-processx): Update to 3.3.1.
2019-05-11 12:05:33 +02:00
00399a780b
gnu: r-ggrepel: Update to 0.8.1.
...
* gnu/packages/cran.scm (r-ggrepel): Update to 0.8.1.
2019-05-11 12:05:33 +02:00
7a67bca198
gnu: r-dimred: Update to 0.2.3.
...
* gnu/packages/cran.scm (r-dimred): Update to 0.2.3.
2019-05-11 12:05:33 +02:00
d1d6e13eb6
gnu: r-regioner: Update to 1.16.1.
...
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.1.
2019-05-11 12:05:32 +02:00
41e09a159a
gnu: osc: Update to 0.165.0.
...
* gnu/packages/build-tools.scm (osc): Update to 0.165.0.
[source]: Use git-fetch.
[arguments]: Use python3. osc_hotshot.py is gone. So, do not attempt to delete
it. Rename fix-filename-and-remove-unused phase to fix-filename phase.
[inputs]: Add rpm. Remove python2-urlgrabber. Replace python2-m2crypto and
python2-pycurl with python-m2crypto and python-pycurl.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2019-05-11 14:08:52 +05:30
c0023514a3
gnu: rpm: Update to 4.14.2.1.
...
* gnu/packages/package-management.scm (rpm): Update to 4.14.2.1.
[inputs]: Use python instead of python-2.
[home-page]: Use HTTPS URI.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2019-05-11 14:08:51 +05:30
7f03133ba3
doc: Fix typo.
...
* doc/guix.texi (shepherd-service): Replace 'requirements' with 'requirement'.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2019-05-11 13:11:35 +05:30
c3ebaec531
gnu: neovim: Update to 0.3.5.
...
* gnu/packages/vim.scm (neovim): Update to 0.3.5.
[source]: Use git-fetch.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2019-05-11 12:56:13 +05:30
825c39bfbb
etc: Refer to ci.guix.gnu.org in install script.
...
* etc/guix-install.sh: Replace reference to ci.guix.info with ci.guix.gnu.org.
2019-05-10 23:38:10 +02:00
dc5729a8e0
services: 'gc-root-service-type' now has a default value.
...
* gnu/services.scm (gc-root-service-type)[default-value]: New field.
2019-05-10 23:29:18 +02:00
76ae10a1f4
linux-container: Improve filtering of unnecessary file systems.
...
* gnu/system/linux-container.scm (containerized-operating-system)[user-file-systems]:
Add trailing slash for the "/dev/" and "/sys/" prefixes.
2019-05-10 23:29:18 +02:00
f8885ecab6
system: Export 'operating-system-default-essential-services'.
...
* gnu/system.scm (essential-services): Rename to...
(operating-system-default-essential-services): ... this.
(<operating-system>)[essential-services]: Adjust accordingly.
2019-05-10 23:29:18 +02:00
755a6027ce
gnu: Go 1.11: Update to 1.11.10.
...
* gnu/packages/golang.scm (go-1.11): Update to 1.11.10.
2019-05-10 13:30:07 -04:00
7a9158f83e
gnu: emacs-auctex: Update to 12.1.2.
...
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 12.1.2.
2019-05-10 19:23:37 +02:00
de1206dc5f
gnu: emacs-debbugs: Update to 0.18.
...
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.18.
2019-05-10 19:20:18 +02:00
d13f3a033e
gnu: gnome-tweak-tool: Update to 3.28.1.
...
Fixes <https://bugs.gnu.org/35597 >.
* gnu/packages/gnome.scm (gnome-tweak-tool): Deprecate and rename...
(gnome-tweaks): ...to this. Update to 3.28.1.
[build-system]: Use meson-build-system.
[arguments]: Adjust configure flags; pass glib-or-gtk? flag; remove custom
phases that are now provided by the meson-build-system; add phases "wrap" and
"wrap-gi-typelib".
[native-inputs]: Remove meson-for-build and ninja.
[home-page]: Update.
[description]: Use "Tweaks" instead of "Tweak Tool".
* gnu/packages/patches/gnome-tweak-tool-search-paths.patch: Rename file...
* gnu/packages/patches/gnome-tweaks-search-paths.patch: ...to this.
* gnu/local.mk (dist_patch_DATA): Update patch file name.
2019-05-10 13:31:32 +02:00
496b024fde
gnu: Add r-rqc.
...
* gnu/packages/bioconductor.scm (r-rqc): New variable.
2019-05-10 13:31:03 +02:00
5e0241db84
gnu: Add r-quasr.
...
* gnu/packages/bioconductor.scm (r-quasr): New variable.
2019-05-10 13:31:03 +02:00
5865606459
gnu: Add r-rhisat2.
...
* gnu/packages/bioconductor.scm (r-rhisat2): New variable.
2019-05-10 13:31:03 +02:00
1444153913
gnu: Add r-sgseq.
...
* gnu/packages/bioconductor.scm (r-sgseq): New variable.
2019-05-10 13:31:03 +02:00
30f1029f4c
gnu: Add r-xgboost.
...
* gnu/packages/cran.scm (r-xgboost): New variable.
2019-05-10 13:31:03 +02:00
29591ca611
gnu: Add r-citr.
...
* gnu/packages/cran.scm (r-citr): New variable.
2019-05-10 13:31:02 +02:00
afc4370d4c
gnu: Add r-refmanager.
...
* gnu/packages/cran.scm (r-refmanager): New variable.
2019-05-10 13:31:02 +02:00
85625cae66
gnu: Add r-ggfortify.
...
* gnu/packages/cran.scm (r-ggfortify): New variable.
2019-05-10 13:31:02 +02:00
c9487dfadc
gnu: Add r-plot3d.
...
* gnu/packages/cran.scm (r-plot3d): New variable.
2019-05-10 13:31:02 +02:00
70debac5f1
gnu: Add r-enrichr.
...
* gnu/packages/cran.scm (r-enrichr): New variable.
2019-05-10 13:31:02 +02:00
5bea832f72
gnu: Add r-dalex.
...
* gnu/packages/cran.scm (r-dalex): New variable.
2019-05-10 13:31:02 +02:00
4d06ef4b71
gnu: Add r-rbowtie.
...
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
2019-05-10 13:31:02 +02:00
8c42f8f6e8
gnu: Add r-iclusterplus.
...
* gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
2019-05-10 13:31:01 +02:00
b40a36baff
gnu: linux-libre: Update to 5.1.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.
(%linux-libre-hash): Update hash.
(%linux-libre-5.0-patches): Rename to ...
(%linux-libre-5.1-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-veyron)
(linux-libre-arm-omap2plus): Use %linux-libre-5.1-patches.
(vhba-module): Move definition below the kernel packages.
* gnu/packages/aux-files/linux-libre/5.0-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.1-arm.conf,
gnu/packages/aux-files/linux-libre/5.1-arm64.conf,
gnu/packages/aux-files/linux-libre/5.1-i686.conf,
gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2019-05-10 00:00:49 -04:00
3d8033af42
gnu: rust: Update to 1.34.1.
...
* gnu/packages/rust.scm (rust): Update to 1.34.1.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:09 +02:00
4ed20d3cfe
gnu: rust: Make source derivations smaller.
...
* gnu/packages/rust.scm (rust-source-pre-1.32): Delete procedure.
(rust-bootstrapped-package-pre-1.32): Delete procedure.
(rust-bootstrapped-package): Remove optional keys, and return an origin.
(rust-uri): New variable.
(mrustc): Change native-input "rust" to use source of rust-1.19.
(rust-1.19)[source]: Define package source.
(rust-1.20): Use rust-bootstrapped-package.
(rust-1.21): Likewise.
(rust-1.22): Likewise.
(rust-1.23): Likewise.
(rust-1.24): Likewise.
(rust-1.25): Likewise.
(rust-1.26): Likewise.
(rust-1.27): Likewise.
(rust-1.28): Likewise.
(rust-1.29): Likewise.
(rust-1.30): Likewise.
(rust-1.31): Likewise.
(rust-1.32): Likewise.
(rust-1.33): Likewise.
(rust-1.34): Likewise.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:09 +02:00
bea01c0d2b
gnu: rust: Delete install logs and manifests.
...
* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[delete-install-logs]:
New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:08 +02:00
e88735b45f
build/cargo-utils: Remove "src-name" parameter.
...
* gnu/packages/gnuzilla.scm (icecat)[arguments]<#:phases>
[patch-cargo-checksums]: Delete "null-file" variable.
* gnu/packages/rust.scm (%cargo-reference-project-file): Delete variable.
* gnu/packages/rust.scm (rust-1.19): Remove reference to
"%cargo-reference-project-file".
* guix/build/cargo-utils.scm (generate-checksums): Remove "src-name"
parameter.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-10 00:44:08 +02:00
d78010b81e
gnu: gcc-4.7: Hide package.
...
* gnu/packages/gcc.scm (gcc-4.7): Wrap in "hidden-package" expression.
2019-05-09 23:18:39 +02:00
935568d5ce
gnu: emacs-dash: Update to 2.16.0.
...
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.16.0.
2019-05-09 22:51:33 +02:00
b97b4624d0
gnu: Add guile-file-names.
...
* gnu/packages/guile-xyz.scm (guile-file-names): New variable.
2019-05-09 22:41:14 +02:00
ae623b3f9d
gnu: seabios: Update to 1.12.1.
...
This is a stable release despite the missing tarball.
<https://mail.coreboot.org/hyperkitty/list/seabios@seabios.org/thread/ONGRJVF3A45SAXOKBED52V2UD3YUWTRT/ >
* gnu/packages/firmware.scm (seabios): Update to 1.12.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
2019-05-09 21:16:54 +02:00
05de4c346d
gnu: man-pages: Update to 5.01.
...
* gnu/packages/man.scm (man-pages): Update to 5.01.
2019-05-09 21:16:53 +02:00
34dce89a0c
gnu: emacs-sml-mode: Update to 6.9.
...
* gnu/packages/emacs-xyz.scm (emacs-sml-mode): Update to 6.9.
2019-05-09 21:16:53 +02:00
b03a4ed465
gnu: cdemu-client: Update to 3.2.1.
...
* gnu/packages/cdrom.scm (cdemu-client): Update to 3.2.1.
2019-05-09 21:13:29 +02:00
97dbf75a56
gnu: cdemu-daemon: Update to 3.2.2.
...
* gnu/packages/cdrom.scm (cdemu-daemon): Update to 3.2.2.
2019-05-09 21:13:28 +02:00
d201571754
gnu: libmirage: Update to 3.2.2.
...
* gnu/packages/cdrom.scm (libmirage): Update to 3.2.2.
2019-05-09 21:13:28 +02:00
819b3b8201
gnu: vhba-module: Update to 20190410.
...
* gnu/packages/linux.scm (vhba-module): Update to 20190410.
2019-05-09 21:13:28 +02:00
38878020b0
gnu: cloc: Update to 1.82.
...
* gnu/packages/code.scm (cloc): Update to 1.82.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
2019-05-09 21:13:28 +02:00
Ricardo Wurmus