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432 Commits

Author SHA1 Message Date
Ricardo Wurmus 02615bfa2f gnu: r: Drop texlive from native-inputs. 
* gnu/packages/statistics.scm (r)[native-inputs]: Remove "texlive".
 2015-09-04 11:55:16 +02:00
Ricardo Wurmus af23b6e946 gnu: r: Install info documentation. 
* gnu/packages/statistics.scm (r)[arguments]: Add phases "make-info" and
  "install-info" to build and install info documentation.
 2015-09-04 11:55:16 +02:00
Ricardo Wurmus 5e9738b7ca gnu: r: Drop IcedTea from inputs. 
* gnu/packages/statistics.scm (r)[inputs]: Remove "icedtea6".
 2015-09-04 11:55:16 +02:00
Ricardo Wurmus d11b808f4a gnu: Add r-ggplot2. 
* gnu/packages/statistics.scm (r-ggplot2): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus a11ee478a6 gnu: Add r-scales. 
* gnu/packages/statistics.scm (r-scales): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus 9ca731baf1 gnu: Add r-reshape2. 
* gnu/packages/statistics.scm (r-reshape2): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus d5cd5c1568 gnu: Add r-stringr. 
* gnu/packages/statistics.scm (r-stringr): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus 4dca98dc81 gnu: Add r-stringi. 
* gnu/packages/statistics.scm (r-stringi): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus a45ba1270c gnu: Add r-rcolorbrewer. 
* gnu/packages/statistics.scm (r-rcolorbrewer): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus 9a4d8968f0 gnu: Add r-proto. 
* gnu/packages/statistics.scm (r-proto): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus 7e10056b6b gnu: Add r-plyr. 
* gnu/packages/statistics.scm (r-plyr): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus ea69e2f853 gnu: Add r-rcpp. 
* gnu/packages/statistics.scm (r-rcpp): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus 4437333958 gnu: Add r-munsell. 
* gnu/packages/statistics.scm (r-munsell): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus d69c4b04fa gnu: Add r-magrittr. 
* gnu/packages/statistics.scm (r-magrittr): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus b7eee9fc65 gnu: Add r-labeling. 
* gnu/packages/statistics.scm (r-labeling): New variable.
 2015-09-03 14:31:51 +02:00
Ricardo Wurmus 112bb3c04f gnu: Add r-gtable. 
* gnu/packages/statistics.scm (r-gtable): New variable.
 2015-09-03 14:31:50 +02:00
Ricardo Wurmus 177f38c7fe gnu: Add r-digest. 
* gnu/packages/statistics.scm (r-digest): New variable.
 2015-09-03 14:31:50 +02:00
Ricardo Wurmus 3587effb7a gnu: Add r-dichromat. 
* gnu/packages/statistics.scm (r-dichromat): New variable.
 2015-09-03 14:31:50 +02:00
Ricardo Wurmus b12636e6bb gnu: Add r-colorspace. 
* gnu/packages/statistics.scm (r-colorspace): New variable.
 2015-09-03 14:31:50 +02:00
Ricardo Wurmus 12a9f4af01 gnu: r: Add R_LIBS_SITE to native-search-paths. 
* gnu/packages/statistics.scm (r)[native-search-paths]: Add
  specification for "R_LIBS_SITE" variable.
 2015-08-17 10:35:41 +02:00
Ricardo Wurmus 62de2545e1 gnu: r: Update to 3.2.2. 
* gnu/packages/statistics.scm (r): Update to 3.2.2.
 2015-08-17 10:35:41 +02:00
Ricardo Wurmus b05d1c68bc gnu: r: Replace "atlas" with "openblas". 
* gnu/packages/statistics.scm (r)[inputs]: Replace "atlas" with "openblas".
 2015-07-03 18:45:14 +02:00
Ricardo Wurmus f4f4ced8dc gnu: r: Set default pager. 
* gnu/packages/statistics.scm (r)[arguments]: Add phase "set-default-pager" to
  avoid "false" as a default pager.
 2015-07-02 10:50:55 +02:00
Ricardo Wurmus 74e03fccd3 gnu: r: Update to 3.2.1. 
* gnu/packages/statistics.scm (r): Update to 3.2.1.
* gnu/packages/patches/r-fix-15899.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
 2015-06-29 16:13:28 +02:00
Ricardo Wurmus 19afbea136 gnu: Replace versioned gfortran inputs with just "gfortran". 
* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with
  "gfortran".
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise.
* gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu)
   (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise.
   (octave)[native-inputs]: Likewise.
   (gmsh)[propagated-inputs]: Likewise.
* gnu/packages/mpi.scm (openmpi)[inputs]: Likewise.
* gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise.
* gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with
  "gfortran".
 2015-06-25 18:28:54 +02:00
Ricardo Wurmus 83a0db178f gnu: r: Use gfortran-4.9. 
* gnu/packages/statistics.scm (r)[inputs]: Replace gfortran-4.8 with
  gfortran-4.9.
 2015-06-24 12:03:00 +02:00
Ricardo Wurmus 9099e88182 gnu: r: Apply patch to fix linking against R. 
* gnu/packages/patches/r-fix-15899.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/statistics.scm (r)[source]: Use it.
 2015-05-21 11:54:46 +02:00
Ricardo Wurmus 3c43bcc68d gnu: r: Update to 3.2.0. 
* gnu/packages/statistics.scm (r): Update to 3.2.0.
 2015-04-23 13:07:11 +02:00
Ricardo Wurmus ff2b1c17b8 gnu: r: Set library rpath. 
* gnu/packages/statistics.scm (r)[arguments]: Add the rpath for lib directory
  of output to LDFLAGS.
 2015-04-23 13:07:10 +02:00
Ludovic Courtès ce0614ddb0 gnu: Move 'which' to (gnu packages base). 
* gnu/packages/which.scm: Remove.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/base.scm (which): New variable.
* gnu/packages/aspell.scm, gnu/packages/audio.scm,
  gnu/packages/autogen.scm, gnu/packages/cdrom.scm,
  gnu/packages/compression.scm, gnu/packages/datamash.scm,
  gnu/packages/games.scm, gnu/packages/glib.scm,
  gnu/packages/gnu-pw-mgr.scm, gnu/packages/gnutls.scm,
  gnu/packages/gps.scm, gnu/packages/guile.scm,
  gnu/packages/java.scm, gnu/packages/libevent.scm,
  gnu/packages/linux.scm, gnu/packages/lisp.scm,
  gnu/packages/node.scm, gnu/packages/ntp.scm,
  gnu/packages/orpheus.scm, gnu/packages/pciutils.scm,
  gnu/packages/python.scm, gnu/packages/qt.scm,
  gnu/packages/rsync.scm, gnu/packages/sawfish.scm,
  gnu/packages/scheme.scm, gnu/packages/ssh.scm,
  gnu/packages/statistics.scm, gnu/packages/texlive.scm,
  gnu/packages/wdiff.scm: Adjust accordingly.
 2015-03-04 17:23:27 +01:00
Ricardo Wurmus 0e309f1e5b gnu: icedtea6: split outputs. 
* gnu/packages/java.scm (icedtea6)[outputs]: Use separate outputs for
  documentation ("doc"), JDK ("jdk"), and JRE ("out").
* gnu/packages/java.scm (ant)[native-inputs]: Reference "jdk" output of
  icedtea6 package.
* gnu/packages/statistics.scm (r)[inputs]: Reference "jdk" output of icedtea6
  package.
 2015-03-04 15:59:41 +01:00
Ricardo Wurmus cb7e486797 gnu: Add R. 
* gnu/packages/statistics.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it
* guix/download.scm (%mirrors): Add CRAN mirrors.
 2015-02-16 16:35:41 +01:00