Commit Graph

38466 Commits

Author SHA1 Message Date
Carl Dong 7180dd6716
gnu: Add basic support for riscv64-linux-gnu targets.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add
"riscv64-linux".
* gnu/packages/linux.scm (system->linux-architecture): Add "riscv"
prefix.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-29 15:40:31 +02:00
Nicolas Goaziou 4f963be052
gnu: Add childsplay.
* gnu/packages/education.scm (childsplay): New variable.
2019-05-29 13:09:53 +02:00
Mathieu Othacehe 694cb8dc62
installer: Fix wifi menu crash with hidden SSIDs.
This fixes https://issues.guix.gnu.org/issue/35622.

* gnu/installer/connman.scm (<service>): Mention that name may be false.
* gnu/installer/newt/wifi.scm (wifi-services): Filter out wifi services
without name.

Co-authored by: Pierre Neidhardt <mail@ambrevar.xyz>
2019-05-29 11:44:49 +02:00
Ricardo Wurmus 4b92dac20f
gnu: awscli: Add missing input.
Fixes <https://bugs.gnu.org/35980>.

* gnu/packages/python-web.scm (awscli)[arguments]: Add build phase
"fix-reference-to-groff".
[inputs]: Add groff.
2019-05-29 10:56:28 +02:00
Ricardo Wurmus d37ba98409
gnu: r-scran: Update to 1.12.1.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.1.
2019-05-29 00:02:42 +02:00
Ricardo Wurmus 55cd48508e
gnu: r-scater: Update to 1.12.2.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.2.
2019-05-29 00:02:37 +02:00
Ricardo Wurmus 102cf9a1ca
gnu: r-sva: Update to 3.32.1.
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.32.1.
2019-05-29 00:02:31 +02:00
Ricardo Wurmus 24f46e6e9e
gnu: r-genomicfeatures: Update to 1.36.1.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.1.
2019-05-29 00:02:25 +02:00
Ricardo Wurmus 4eea449aaa
gnu: r-edger: Update to 3.26.4.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.4.
2019-05-29 00:02:17 +02:00
Ricardo Wurmus 4929a30f69
gnu: r-variantannotation: Update to 1.30.1.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.1.
2019-05-29 00:02:10 +02:00
Ricardo Wurmus e4519ee73d
gnu: r-atacseqqc: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.1.
2019-05-28 23:56:36 +02:00
Ricardo Wurmus 13b49976b7
gnu: r-icobra: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.1.
2019-05-28 23:56:31 +02:00
Ricardo Wurmus 85d0bd5340
gnu: r-chippeakanno: Update to 3.18.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.1.
2019-05-28 23:56:27 +02:00
Ricardo Wurmus f43ec9e96a
gnu: r-geosphere: Update to 1.5-10.
* gnu/packages/cran.scm (r-geosphere): Update to 1.5-10.
2019-05-28 23:56:15 +02:00
Ricardo Wurmus 0fe52daa59
gnu: r-ggfortify: Update to 0.4.7.
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.7.
2019-05-28 23:56:08 +02:00
Ricardo Wurmus 7a8577717f
gnu: r-wgcna: Update to 1.68.
* gnu/packages/cran.scm (r-wgcna): Update to 1.68.
2019-05-28 23:56:04 +02:00
Ricardo Wurmus 650e8defa0
gnu: r-bookdown: Update to 0.11.
* gnu/packages/cran.scm (r-bookdown): Update to 0.11.
[propagated-inputs]: Add ghc-pandoc; remove r-yaml.
2019-05-28 23:55:44 +02:00
Ricardo Wurmus 20656a0202
gnu: r-upsetr: Update to 1.4.0.
* gnu/packages/cran.scm (r-upsetr): Update to 1.4.0.
2019-05-28 23:55:38 +02:00
Ricardo Wurmus 41059f63df
gnu: r-epi: Update to 2.37.
* gnu/packages/cran.scm (r-epi): Update to 2.37.
2019-05-28 23:55:33 +02:00
Ricardo Wurmus 9a749cad19
gnu: r-etm: Update to 1.0.5.
* gnu/packages/cran.scm (r-etm): Update to 1.0.5.
2019-05-28 23:55:27 +02:00
Ricardo Wurmus 10dbc3fc54
gnu: r-cmprsk: Update to 2.2-8.
* gnu/packages/cran.scm (r-cmprsk): Update to 2.2-8.
2019-05-28 23:55:21 +02:00
Ricardo Wurmus fa10f0d330
gnu: r-ks: Update to 1.11.5.
* gnu/packages/cran.scm (r-ks): Update to 1.11.5.
2019-05-28 23:55:14 +02:00
Ricardo Wurmus 1d7bde781f
gnu: r-bayesplot: Update to 1.7.0.
* gnu/packages/cran.scm (r-bayesplot): Update to 1.7.0.
[propagated-inputs]: Add r-glue, r-tibble, and r-tidyselect.
2019-05-28 23:54:53 +02:00
Ricardo Wurmus 27abdb11ae
gnu: r-refgenome: Update to 1.7.7.
* gnu/packages/cran.scm (r-refgenome): Update to 1.7.7.
2019-05-28 23:54:46 +02:00
Ricardo Wurmus 794c9e7d96
gnu: r-snakecase: Update to 0.11.0.
* gnu/packages/cran.scm (r-snakecase): Update to 0.11.0.
2019-05-28 23:54:40 +02:00
Ricardo Wurmus 9dd351233b
gnu: r-openxlsx: Update to 4.1.0.1.
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.0.1.
2019-05-28 23:54:36 +02:00
Ricardo Wurmus d328379d62
gnu: r-pillar: Update to 1.4.1.
* gnu/packages/cran.scm (r-pillar): Update to 1.4.1.
2019-05-28 23:54:32 +02:00
Ricardo Wurmus 130314d8fa
gnu: r-tsp: Update to 1.1-7.
* gnu/packages/cran.scm (r-tsp): Update to 1.1-7.
2019-05-28 23:54:26 +02:00
Ricardo Wurmus 6d3cfb88ea
gnu: r-jomo: Update to 2.6-8.
* gnu/packages/cran.scm (r-jomo): Update to 2.6-8.
2019-05-28 23:54:18 +02:00
Ricardo Wurmus beb82eb9d0
gnu: r-ksamples: Update to 1.2-9.
* gnu/packages/cran.scm (r-ksamples): Update to 1.2-9.
2019-05-28 23:54:12 +02:00
Ricardo Wurmus 6edf0fb3db
gnu: r-lpsolve: Update to 5.6.13.1.
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.1.
2019-05-28 23:54:07 +02:00
Ricardo Wurmus 14532452b8
gnu: r-car: Update to 3.0-3.
* gnu/packages/statistics.scm (r-car): Update to 3.0-3.
2019-05-28 23:54:00 +02:00
Ricardo Wurmus 341643c6e1
gnu: r-fpc: Update to 2.2-1.
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-1.
[propagated-inputs]: Remove r-trimcluster.
2019-05-28 23:53:43 +02:00
Ricardo Wurmus f95690ceae
gnu: r-prabclus: Update to 2.2-7.1.
* gnu/packages/statistics.scm (r-prabclus): Update to 2.2-7.1.
2019-05-28 23:53:33 +02:00
Ricardo Wurmus 1498b5a2a4
gnu: r-zoo: Update to 1.8-6.
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-6.
2019-05-28 23:53:28 +02:00
Ricardo Wurmus 3fca3fa1bc
gnu: r-rmarkdown: Update to 1.13.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.13.
[propagated-inputs]: Add r-xfun.
2019-05-28 23:53:15 +02:00
Ricardo Wurmus 923c6ac139
gnu: r-evaluate: Update to 0.14.
* gnu/packages/statistics.scm (r-evaluate): Update to 0.14.
2019-05-28 23:53:02 +02:00
h.nasajpour 67458e209d
gnu: python-attrs: Update to 19.1.0.
* gnu/packages/python-xyz.scm (python-attrs): Update to 19.1.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-28 21:48:10 +02:00
h.nasajpour 205eb40e5b
gnu: python-flask: Update to 1.0.3.
* gnu/packages/python-web.scm (python-flask): Update to 1.0.3.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-28 21:18:24 +02:00
Pierre Neidhardt 458e92215f
gnu: d-feet: Fix missing input and update to 0.3.14.
* gnu/packages/gnome.scm (d-feet): Update to 0.3.14.
[inputs]: Add hicolor-icon-theme since d-feet won't list anything without it.
2019-05-28 14:53:02 +02:00
Ludovic Courtès e7f078c337
gnu: guix: Update to 35d1354.
* gnu/packages/package-management.scm (guix): Update to 35d1354.
2019-05-28 09:51:12 +02:00
Nicolas Goaziou 70fa77d881
gnu: emacs-relint: Update to 1.8.
* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.8.
2019-05-27 23:22:34 +02:00
Nicolas Goaziou d8d896c5b5
gnu: emacs-xr: Update to 1.12.
* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.12.
2019-05-27 23:22:19 +02:00
Ludovic Courtès 2e5c71b2a2
gnu: guix: Add dependency on lzlib.
* gnu/packages/package-management.scm (guix)[inputs]: Add LZLIB.
2019-05-27 22:47:24 +02:00
Ricardo Wurmus 8916034a34
gnu: r-shiny: Fix JavaScript minification.
Fixes <https://bugs.gnu.org/35923>.

* gnu/packages/cran.scm (r-shiny)[native-inputs]: Add uglify-js.
2019-05-27 22:09:22 +02:00
Guillaume LE VAILLANT ed72a133db
gnu: Add osmctools
* gnu/packages/geo.scm (osmctools): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-05-27 14:32:13 -04:00
Alex Griffin 521d736ae9
gnu: go@1.4: Update to 1.4-bootstrap-20171003.
* gnu/packages/golang.scm (go-1.4): Use the bootstrap branch that is
still supported upstream.
[version]: Update to 1.4-bootstrap-20171003.
[arguments]: Remove obsolete fix for timezone test which is now included
upstream.  Don't manually disable cgo because it is disabled by default.
Manually enable test suite because future releases will disable tests by
default.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-05-27 14:26:46 -04:00
Danny Milosavljevic 8d1647b228
gnu: python-alembic: Update to 1.0.10.
* gnu/packages/databases.scm (python-alembic): Update to 1.0.10.
2019-05-27 18:16:25 +02:00
Stefan Stefanović cf342a8598
gnu: tlp: Add required x86-energy-perf-policy input dependency.
* gnu/packages/linux.scm (tlp)
[inputs]: Add system specific x86-energy-perf-policy dependency.
[arguments]<#:phases>['wrap]:
Adjust bin-directory procedure to return #f on missing input,
a guard against system specific input dependencies.
Filter only strings in the path list. Reformat for-each block.
Add x86-energy-perf-policy in bin-directory input-name list.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-05-27 16:41:12 +02:00
Stefan Stefanović 71bd55cb2a
gnu: Add x86-energy-perf-policy.
* gnu/packages/linux.scm (x86-energy-perf-policy): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-27 16:35:09 +02:00